Cp4.1LG15g08800 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG15g08800
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionLOB domain-containing protein, putative
LocationCp4.1LG15 : 8564234 .. 8567818 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAAGTAGATAATATTAATATATTTCATTTCTAGACGTTTCAATTCTTATCTCATCATAATTGTATTTTAAAATTTCATTCAACTCTAAATATAATGAATTATTATTATTATTATAAAAAAAAAATGTAAAAAAGATTAATGTTTTTTTACTTGTTTAGTTAATTGGATATTGAATATTGGGCTTGTGAAGGCCCATCTTCGTTATTGGGCTTTTGCATTGGACTTCGTGTTGATGCGCAAGATAGCGGGCCACCCATCTGGTTTCCATTTAATAATACCCAACGTGAGTTTTTGAAGATTTTGAAATGCGTCGACTAGGAAAAGATTTACAAGAATGTTTTATTCACCTCTTCAATCGAGGTGGGATCTTACAATCCACCCCCATTTAGAGCACATTGTCCTTAACTGACACTCGTTCCTCTTTCCAATCCATGAAGGATTTCACAATCTGCCCCTTCGAGGCCTAGTGTCCTCGTTGGCACATCGTCCCGTGTGCACCCCCTTTGAGGATCATTGTCCTCGCGTAATCAAATGAAATAAAGCAGCTCGATAAGACCCTATACCCAAAACTAACATCATATAACCCAATTGAGACATGGTAGAATAGGCTAAACTTCTCTTAATATCTTTTTGAACAAGAGCTAAAGTAGCTCCAAATAGTACCGTTATTATACCTATAAAAGCTATTAGATTCATGATGTAAGGTAAGGTATTACTATAAAAAGCGAAAGAAAGGGAACCACAAGAAAAAAATTCTTGCTGACGCTCGTTTCTCTCTCCCATTGATGTGGGATCTGGCAACATTGAGTTTGAAGGGATCCAACTCATCCTCAAATAATTAATTGCTTCCATGGTGGGCCCTCTACAAAGATTTTGGTATCACTTCTACTCTACTTAGTTTACTCAAAAGTAGTGAAATTCTTGATTTGGGTTCACAATTATATAATGATGCATGGGAGCTGCAAAAAGGGCAGCGCCCCACCGCCTTGCGCTGCGTGCAAGGTCAAGCCTGCGTTTTTGCTCCTTATTTCCCTGCCCATCACCCCCATAAATTCTGCAGTGTTCACAAGGTGTTTGGAGCGAGTAATGTCAGCAAATTTCCTCATTTCATTCATTCGAGAAATCACGATGAATAATTGAGCTGTAAACGCAGGAGTTGGGAGAGCAGCAACGGAGCGATGCTGTGAGTTCGATGGTGTACGAGGCTAATGCAAGGATTCGAGATCCGGTTTACGGGTGCGTGGGAACGATAGCGTGTCTGCAGCGCCAAGTGGATGCGTTGCAACAGCAATTGGCCATCACACGAGCCCAGCTACTTCAATTGAAAATGGCCCAATTTTCTTCAGCAAAATCATCATCCGTAGGTAACCTTCTTCTTCCTCCTTTACCCAATATCAATATCAATGTGGGCGCATCCCCATCCTTAGGGTCTAAACCTCTCCCTATCCGAACGCGTTTTAAAAAGTTTTGAGTGGAAATCTAAAAGAAAAAGTCTAGAGAGAACAATATCGACCGGAGGTAAGCTTAAGCTGTTACAAAGATTGGATGTGTTCATGTGAAGCTTGATAAAAATGGATAGTCAAGTTAAACATATTTGACTTGAAGAAAGTCGATGTGAGGTAACTTTTGTAAAGAAAAGTATACAACGAATATGGACAAAAAAGCATGTTATCACGTGTTGTATATTAAAGAATGTTTACGTGACATTTTGAATCCAAATTTCACATCTTGATCTAAGTACTAAGTCTAGGGGTAATAGTATGTGTAATAGCCTAATCCTAGCGCTAGTAGATATTGTTATCTTTAGTCAGTTACGTATCGTCGTCATGCTTTGTTCCTTTCTTCAACCGATATGGGATCTCACAATCCACCCTCCTTGAGGGCTTAGAGTCCTCGTTGGCACACCACTCGGTGTCTGGCTCTGATACCATTTGTAACAGTCTAAGTTCACTGTTAGTAAATATTGTCTGTTTTGGCCCATTACGTATCGTCATCAGCCTCACAGATTTAAAACGTATCTATTGGAGAGAAGTTTCCACACGTTTATAAGGAATGTTTTGTTCACCTCTCTAATCGACGTGGAATCTCATTGAAAAAGATCACGTATCAGCAGCGTCAGGCACTAAGTTTATTTTCATAAAACTAATCAAACACAAAACCATTTGGGGCCCAACCTCATATGCAACAGTGTATTGATGTTGGTGCTGAATATAAATACAATTCAGTAGTAATAATGAGATTGCTGCAGTGAGTGTATGTGGGTGGTGAGAGTGTCAACTTGTTTAGAATGTATATGTATGGGCCTAACCAGCACTGGAGGGGAGAGGGGACTGACCTTTCAACACTATTTGCTTTCAGATTTTGTTTTAGGTCAGAGATGATAGGTAGGGTATCAAACATAAACCCCATTATTACCCCACACACACACCACCAACCCATATAACCCATCACCCCCTTTCGATTGAGTTCACTTTCTAGTCTCTCAGTGCTTTTTTTTACGACTAAAAGAACACTCTTTGTACCTAAACACTTGTCTTTAGCTAAGCTATGTTCGAATTGTTTGAAGAGGAGGAGTACAAAATGAGAATAATAATTTAGCGATGATCATGAAGAAACCAATAGCATCCGATCCCATCAACTACAAACGACAGCCACCTTTTTAAACCATATATTCCCAATCGCTCACTGTTTGATTGAATCATTGGATCAAAGTACACCACAAAATGCTCAACCAAAAGGAATCACATTTTGAGATCTCATTAATTTAAACTAATTAAACATAATCAGATTCCTTCTGTTGGTCTCCTATGCTTCAAAATCCTAGGACGATATAGTTCAATTAATTAATCTAATTTCCTGGTTTTGCTGACCCTTTTGATCTTCTCATCAATTCCATCTCTTCAACTATTGATATATGGTAAATACATCAGGCTCCTCATTTCTTGTTCCCATTCCTCCTCATCCTTTTTCATCTGCAAAAATGATAGAATATTTTATCATAATTGAATTAGAAGCATAATGGGATGTGGGTGGAAGGGGTTTCGTATTGGATTTGACCCACAATCAAAATATGTCGAAGCAAGAGAAAAACTTTGAGGAGAGAAAGCTTTTGGAACAAAGAAACCTTAACCACTTAGCATTTCGAATCTTTTTTTTATACCTGGACACCCAACTCATGGTTGTATACTAATTCATTGTCCATGTGAAGAATACAAGTATCATTCTTTGCTGGATTAGGTTCTTGATCACATGCTTCGTTGTTCCTTGCAAATCTCCCTCGGACTCGAATCCTTCTGTCGGCTAACGTTTTCCGACATGCATACTGTTTTATATAAACGAATGATATATCAATATTGTTGAGAATTATTAGGAGAGAAGTCCCACCTCGACTATTCAAAGGGGTTGATTATGTTGATTTTAACATGGATACCTTTATGGTTTTGGTGAAATTTCTTTGGTTTCTTTTCTTCAAGTAGCGCAGAATCCTTTGTTTTCTTACTTCTTCAGAGTAGCGGCCAACCTTCATGTTCGAGTCCTCAGCCACAGGAACTTCATTGCTTTGGATTTCCTATATCATTAA

mRNA sequence

ATGGAAAATTTACTCAAAAGTAGTGAAATTCTTGATTTGGGTTCACAATTATATAATGATGCATGGGAGCTGCAAAAAGGGCAGCGCCCCACCGCCTTGCGCTGCGTGCAAGGTCAAGCCTGCGTTTTTGCTCCTTATTTCCCTGCCCATCACCCCCATAAATTCTGCAGTGTTCACAAGGAGTTGGGAGAGCAGCAACGGAGCGATGCTGTGAGTTCGATGGTGTACGAGGCTAATGCAAGGATTCGAGATCCGGTCAGAGATGATAGAGTAGCGGCCAACCTTCATGTTCGAGTCCTCAGCCACAGGAACTTCATTGCTTTGGATTTCCTATATCATTAA

Coding sequence (CDS)

ATGGAAAATTTACTCAAAAGTAGTGAAATTCTTGATTTGGGTTCACAATTATATAATGATGCATGGGAGCTGCAAAAAGGGCAGCGCCCCACCGCCTTGCGCTGCGTGCAAGGTCAAGCCTGCGTTTTTGCTCCTTATTTCCCTGCCCATCACCCCCATAAATTCTGCAGTGTTCACAAGGAGTTGGGAGAGCAGCAACGGAGCGATGCTGTGAGTTCGATGGTGTACGAGGCTAATGCAAGGATTCGAGATCCGGTCAGAGATGATAGAGTAGCGGCCAACCTTCATGTTCGAGTCCTCAGCCACAGGAACTTCATTGCTTTGGATTTCCTATATCATTAA

Protein sequence

MENLLKSSEILDLGSQLYNDAWELQKGQRPTALRCVQGQACVFAPYFPAHHPHKFCSVHKELGEQQRSDAVSSMVYEANARIRDPVRDDRVAANLHVRVLSHRNFIALDFLYH
Homology
[Close]
BLAST of Cp4.1LG15g08800 vs. Swiss-Prot
Match: LBD3_ARATH (LOB domain-containing protein 3 OS=Arabidopsis thaliana GN=LBD3 PE=2 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 7.9e-12
Identity = 38/65 (58.46%), Postives = 43/65 (66.15%), Query Frame = 1 

Query: 34 RCVQGQACVFAPYFPAHHPHKFCSVHK------------ELGEQQRSDAVSSMVYEANAR 87
          +CV+  +CVFAPYFPA  P+KF  VHK            EL E  RSDAV SMVYEANAR
Sbjct: 24 KCVK-DSCVFAPYFPAKEPYKFAIVHKIFGASNVNKMLQELSENHRSDAVDSMVYEANAR 83

[Close]
BLAST of Cp4.1LG15g08800 vs. Swiss-Prot
Match: LBD4_ARATH (LOB domain-containing protein 4 OS=Arabidopsis thaliana GN=LBD4 PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 5.1e-11
Identity = 37/65 (56.92%), Postives = 41/65 (63.08%), Query Frame = 1 

Query: 34 RCVQGQACVFAPYFPAHHPHKFCSVHK------------ELGEQQRSDAVSSMVYEANAR 87
          RC Q   CVF+PYFPA  P KF +VH+            EL   QR DAVSSMVYEANAR
Sbjct: 23 RCAQD--CVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVSSMVYEANAR 82

[Close]
BLAST of Cp4.1LG15g08800 vs. Swiss-Prot
Match: LBD15_ARATH (LOB domain-containing protein 15 OS=Arabidopsis thaliana GN=LBD15 PE=2 SV=2)

HSP 1 Score: 66.6 bits (161), Expect = 2.0e-10
Identity = 34/65 (52.31%), Postives = 40/65 (61.54%), Query Frame = 1 

Query: 34  RCVQGQACVFAPYFPAHHPHKFCSVHK------------ELGEQQRSDAVSSMVYEANAR 87
           RC Q   C F+PYF  H PHKF SVHK            E+ E QR+DA +S+VYEAN R
Sbjct: 55  RCAQ--ECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPESQRADAANSLVYEANVR 114

[Close]
BLAST of Cp4.1LG15g08800 vs. Swiss-Prot
Match: LBD13_ARATH (LOB domain-containing protein 13 OS=Arabidopsis thaliana GN=LBD13 PE=2 SV=2)

HSP 1 Score: 66.2 bits (160), Expect = 2.6e-10
Identity = 32/65 (49.23%), Postives = 40/65 (61.54%), Query Frame = 1 

Query: 34  RCVQGQACVFAPYFPAHHPHKFCSVHK------------ELGEQQRSDAVSSMVYEANAR 87
           RC +   C F+PYF  H PHKF +VHK            E+GE QR DA +S+VYEAN R
Sbjct: 62  RCAE--ECPFSPYFSPHEPHKFAAVHKVFGASNVSKMLLEVGESQRGDAANSLVYEANLR 121

[Close]
BLAST of Cp4.1LG15g08800 vs. Swiss-Prot
Match: LOB_ARATH (Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana GN=LOB PE=2 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 4.4e-10
Identity = 33/65 (50.77%), Postives = 40/65 (61.54%), Query Frame = 1 

Query: 34 RCVQGQACVFAPYFPAHHPHKFCSVHK------------ELGEQQRSDAVSSMVYEANAR 87
          +C+ G  C+FAPYFP   PHKF +VHK            EL   QR DAV+S+ YEA AR
Sbjct: 21 KCMPG--CIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPHQREDAVNSLAYEAEAR 80

[Close]
BLAST of Cp4.1LG15g08800 vs. TrEMBL
Match: A0A0A0K5P4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G237840 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 3.8e-13
Identity = 43/58 (74.14%), Postives = 43/58 (74.14%), Query Frame = 1 

Query: 41 CVFAPYFPAHHPHKFCSVHK------------ELGEQQRSDAVSSMVYEANARIRDPV 87
          CVFAPYFPA HPHKF SVHK            EL EQQRSDAVSSMVYEANARIRDPV
Sbjct: 38 CVFAPYFPADHPHKFSSVHKVFGASNVSKLLQELPEQQRSDAVSSMVYEANARIRDPV 95

[Close]
BLAST of Cp4.1LG15g08800 vs. TrEMBL
Match: A0A0A0KBA8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G139130 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 6.5e-13
Identity = 44/65 (67.69%), Postives = 45/65 (69.23%), Query Frame = 1 

Query: 34 RCVQGQACVFAPYFPAHHPHKFCSVHK------------ELGEQQRSDAVSSMVYEANAR 87
          RC Q   CVFAPYFPA  PHKF SVHK            EL EQQRSDAVSSMVYEANAR
Sbjct: 25 RCAQD--CVFAPYFPADEPHKFASVHKVFGASNVNKMLQELPEQQRSDAVSSMVYEANAR 84

[Close]
BLAST of Cp4.1LG15g08800 vs. TrEMBL
Match: V7AKI8_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_011G174300g PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 1.9e-12
Identity = 43/65 (66.15%), Postives = 44/65 (67.69%), Query Frame = 1 

Query: 34 RCVQGQACVFAPYFPAHHPHKFCSVHK------------ELGEQQRSDAVSSMVYEANAR 87
          RC Q   CVFAPYFPA  PHKF SVHK            EL E QRSDAVSSMVYEANAR
Sbjct: 23 RCAQD--CVFAPYFPADEPHKFASVHKVFGASNVNKMLQELAEYQRSDAVSSMVYEANAR 82

[Close]
BLAST of Cp4.1LG15g08800 vs. TrEMBL
Match: A5BKW9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0027g01120 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 2.5e-12
Identity = 43/65 (66.15%), Postives = 44/65 (67.69%), Query Frame = 1 

Query: 34 RCVQGQACVFAPYFPAHHPHKFCSVHK------------ELGEQQRSDAVSSMVYEANAR 87
          RC Q   CVFAPYFPA  PHKF SVHK            EL E QRSDAVSSMVYEANAR
Sbjct: 23 RCAQD--CVFAPYFPADEPHKFASVHKVFGASNVNKMLQELPEHQRSDAVSSMVYEANAR 82

[Close]
BLAST of Cp4.1LG15g08800 vs. TrEMBL
Match: A0A0D9ZTL9_9ORYZ (Uncharacterized protein OS=Oryza glumipatula PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 3.2e-12
Identity = 38/53 (71.70%), Postives = 42/53 (79.25%), Query Frame = 1 

Query: 34 RCVQGQACVFAPYFPAHHPHKFCSVHKELGEQQRSDAVSSMVYEANARIRDPV 87
          RCV    CV APYFP   PHKF + H+EL E+QR+DAVSSMVYEANARIRDPV
Sbjct: 48 RCVD--RCVLAPYFPPTEPHKFTTAHRELPEEQRADAVSSMVYEANARIRDPV 98

[Close]
BLAST of Cp4.1LG15g08800 vs. TAIR10
Match: AT1G16530.1 (AT1G16530.1 ASYMMETRIC LEAVES 2-like 9)

HSP 1 Score: 71.2 bits (173), Expect = 4.5e-13
Identity = 38/65 (58.46%), Postives = 43/65 (66.15%), Query Frame = 1 

Query: 34 RCVQGQACVFAPYFPAHHPHKFCSVHK------------ELGEQQRSDAVSSMVYEANAR 87
          +CV+  +CVFAPYFPA  P+KF  VHK            EL E  RSDAV SMVYEANAR
Sbjct: 24 KCVK-DSCVFAPYFPAKEPYKFAIVHKIFGASNVNKMLQELSENHRSDAVDSMVYEANAR 83

[Close]
BLAST of Cp4.1LG15g08800 vs. TAIR10
Match: AT1G31320.1 (AT1G31320.1 LOB domain-containing protein 4)

HSP 1 Score: 68.6 bits (166), Expect = 2.9e-12
Identity = 37/65 (56.92%), Postives = 41/65 (63.08%), Query Frame = 1 

Query: 34 RCVQGQACVFAPYFPAHHPHKFCSVHK------------ELGEQQRSDAVSSMVYEANAR 87
          RC Q   CVF+PYFPA  P KF +VH+            EL   QR DAVSSMVYEANAR
Sbjct: 23 RCAQD--CVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVSSMVYEANAR 82

[Close]
BLAST of Cp4.1LG15g08800 vs. TAIR10
Match: AT2G40470.1 (AT2G40470.1 LOB domain-containing protein 15)

HSP 1 Score: 66.6 bits (161), Expect = 1.1e-11
Identity = 34/65 (52.31%), Postives = 40/65 (61.54%), Query Frame = 1 

Query: 34  RCVQGQACVFAPYFPAHHPHKFCSVHK------------ELGEQQRSDAVSSMVYEANAR 87
           RC Q   C F+PYF  H PHKF SVHK            E+ E QR+DA +S+VYEAN R
Sbjct: 55  RCAQ--ECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPESQRADAANSLVYEANVR 114

[Close]
BLAST of Cp4.1LG15g08800 vs. TAIR10
Match: AT2G30340.1 (AT2G30340.1 LOB domain-containing protein 13)

HSP 1 Score: 66.2 bits (160), Expect = 1.4e-11
Identity = 32/65 (49.23%), Postives = 40/65 (61.54%), Query Frame = 1 

Query: 34  RCVQGQACVFAPYFPAHHPHKFCSVHK------------ELGEQQRSDAVSSMVYEANAR 87
           RC +   C F+PYF  H PHKF +VHK            E+GE QR DA +S+VYEAN R
Sbjct: 62  RCAE--ECPFSPYFSPHEPHKFAAVHKVFGASNVSKMLLEVGESQRGDAANSLVYEANLR 121

[Close]
BLAST of Cp4.1LG15g08800 vs. TAIR10
Match: AT5G63090.2 (AT5G63090.2 Lateral organ boundaries (LOB) domain family protein)

HSP 1 Score: 65.5 bits (158), Expect = 2.5e-11
Identity = 33/65 (50.77%), Postives = 40/65 (61.54%), Query Frame = 1 

Query: 34 RCVQGQACVFAPYFPAHHPHKFCSVHK------------ELGEQQRSDAVSSMVYEANAR 87
          +C+ G  C+FAPYFP   PHKF +VHK            EL   QR DAV+S+ YEA AR
Sbjct: 21 KCMPG--CIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPHQREDAVNSLAYEAEAR 80

[Close]
BLAST of Cp4.1LG15g08800 vs. NCBI nr
Match: gi|449444128|ref|XP_004139827.1| (PREDICTED: LOB domain-containing protein 4-like [Cucumis sativus])

HSP 1 Score: 82.4 bits (202), Expect = 5.5e-13
Identity = 43/58 (74.14%), Postives = 43/58 (74.14%), Query Frame = 1 

Query: 41 CVFAPYFPAHHPHKFCSVHK------------ELGEQQRSDAVSSMVYEANARIRDPV 87
          CVFAPYFPA HPHKF SVHK            EL EQQRSDAVSSMVYEANARIRDPV
Sbjct: 38 CVFAPYFPADHPHKFSSVHKVFGASNVSKLLQELPEQQRSDAVSSMVYEANARIRDPV 95

[Close]
BLAST of Cp4.1LG15g08800 vs. NCBI nr
Match: gi|659092567|ref|XP_008447124.1| (PREDICTED: LOB domain-containing protein 4-like [Cucumis melo])

HSP 1 Score: 82.4 bits (202), Expect = 5.5e-13
Identity = 43/58 (74.14%), Postives = 43/58 (74.14%), Query Frame = 1 

Query: 41 CVFAPYFPAHHPHKFCSVHK------------ELGEQQRSDAVSSMVYEANARIRDPV 87
          CVFAPYFPA HPHKF SVHK            EL EQQRSDAVSSMVYEANARIRDPV
Sbjct: 36 CVFAPYFPADHPHKFSSVHKVFGASNVSKLLQELPEQQRSDAVSSMVYEANARIRDPV 93

[Close]
BLAST of Cp4.1LG15g08800 vs. NCBI nr
Match: gi|470115961|ref|XP_004294159.1| (PREDICTED: LOB domain-containing protein 4 [Fragaria vesca subsp. vesca])

HSP 1 Score: 82.0 bits (201), Expect = 7.2e-13
Identity = 48/78 (61.54%), Postives = 49/78 (62.82%), Query Frame = 1 

Query: 25 QKGQRPTA----LRCVQGQACVFAPYFPAHHPHKFCSVHK------------ELGEQQRS 84
          Q G  P A    LR    Q CVFAPYFPA  PHKF SVHK            EL EQQRS
Sbjct: 9  QGGMSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKMLQELPEQQRS 68

Query: 85 DAVSSMVYEANARIRDPV 87
          DAVSSMVYEANAR+RDPV
Sbjct: 69 DAVSSMVYEANARVRDPV 86

[Close]
BLAST of Cp4.1LG15g08800 vs. NCBI nr
Match: gi|449464650|ref|XP_004150042.1| (PREDICTED: LOB domain-containing protein 4 [Cucumis sativus])

HSP 1 Score: 81.6 bits (200), Expect = 9.4e-13
Identity = 44/65 (67.69%), Postives = 45/65 (69.23%), Query Frame = 1 

Query: 34 RCVQGQACVFAPYFPAHHPHKFCSVHK------------ELGEQQRSDAVSSMVYEANAR 87
          RC Q   CVFAPYFPA  PHKF SVHK            EL EQQRSDAVSSMVYEANAR
Sbjct: 25 RCAQD--CVFAPYFPADEPHKFASVHKVFGASNVNKMLQELPEQQRSDAVSSMVYEANAR 84

[Close]
BLAST of Cp4.1LG15g08800 vs. NCBI nr
Match: gi|593262400|ref|XP_007133379.1| (hypothetical protein PHAVU_011G174300g [Phaseolus vulgaris])

HSP 1 Score: 80.1 bits (196), Expect = 2.7e-12
Identity = 43/65 (66.15%), Postives = 44/65 (67.69%), Query Frame = 1 

Query: 34 RCVQGQACVFAPYFPAHHPHKFCSVHK------------ELGEQQRSDAVSSMVYEANAR 87
          RC Q   CVFAPYFPA  PHKF SVHK            EL E QRSDAVSSMVYEANAR
Sbjct: 23 RCAQD--CVFAPYFPADEPHKFASVHKVFGASNVNKMLQELAEYQRSDAVSSMVYEANAR 82

The following BLAST results are available for this feature:
BLAST of Cp4.1LG15g08800 vs. Swiss-Prot
Match NameE-valueIdentityDescription
LBD3_ARATH7.9e-1258.46LOB domain-containing protein 3 OS=Arabidopsis thaliana GN=LBD3 PE=2 SV=1[more]
LBD4_ARATH5.1e-1156.92LOB domain-containing protein 4 OS=Arabidopsis thaliana GN=LBD4 PE=2 SV=1[more]
LBD15_ARATH2.0e-1052.31LOB domain-containing protein 15 OS=Arabidopsis thaliana GN=LBD15 PE=2 SV=2[more]
LBD13_ARATH2.6e-1049.23LOB domain-containing protein 13 OS=Arabidopsis thaliana GN=LBD13 PE=2 SV=2[more]
LOB_ARATH4.4e-1050.77Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana GN=LOB PE=2 SV=1[more]
BLAST of Cp4.1LG15g08800 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K5P4_CUCSA3.8e-1374.14Uncharacterized protein OS=Cucumis sativus GN=Csa_7G237840 PE=4 SV=1[more]
A0A0A0KBA8_CUCSA6.5e-1367.69Uncharacterized protein OS=Cucumis sativus GN=Csa_6G139130 PE=4 SV=1[more]
V7AKI8_PHAVU1.9e-1266.15Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_011G174300g PE=4 SV=1[more]
A5BKW9_VITVI2.5e-1266.15Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0027g01120 PE=4 SV=... [more]
A0A0D9ZTL9_9ORYZ3.2e-1271.70Uncharacterized protein OS=Oryza glumipatula PE=4 SV=1[more]
BLAST of Cp4.1LG15g08800 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G16530.14.5e-1358.46 ASYMMETRIC LEAVES 2-like 9[more]
AT1G31320.12.9e-1256.92 LOB domain-containing protein 4[more]
AT2G40470.11.1e-1152.31 LOB domain-containing protein 15[more]
AT2G30340.11.4e-1149.23 LOB domain-containing protein 13[more]
AT5G63090.22.5e-1150.77 Lateral organ boundaries (LOB) domain family protein[more]
BLAST of Cp4.1LG15g08800 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449444128|ref|XP_004139827.1|5.5e-1374.14PREDICTED: LOB domain-containing protein 4-like [Cucumis sativus][more]
gi|659092567|ref|XP_008447124.1|5.5e-1374.14PREDICTED: LOB domain-containing protein 4-like [Cucumis melo][more]
gi|470115961|ref|XP_004294159.1|7.2e-1361.54PREDICTED: LOB domain-containing protein 4 [Fragaria vesca subsp. vesca][more]
gi|449464650|ref|XP_004150042.1|9.4e-1367.69PREDICTED: LOB domain-containing protein 4 [Cucumis sativus][more]
gi|593262400|ref|XP_007133379.1|2.7e-1266.15hypothetical protein PHAVU_011G174300g [Phaseolus vulgaris][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004883LOB
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG15g08800.1Cp4.1LG15g08800.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004883Lateral organ boundaries, LOBPFAMPF03195DUF260coord: 61..87
score: 9.
NoneNo IPR availablePANTHERPTHR31301FAMILY NOT NAMEDcoord: 34..86
score: 4.4
NoneNo IPR availablePANTHERPTHR31301:SF7LOB DOMAIN-CONTAINING PROTEIN 3coord: 34..86
score: 4.4

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG15g08800MELO3C012624.2Melon (DHL92) v3.6.1cpemedB264
Cp4.1LG15g08800CsaV3_6G013670Cucumber (Chinese Long) v3cpecucB0317
Cp4.1LG15g08800CsaV3_7G022740Cucumber (Chinese Long) v3cpecucB0324
Cp4.1LG15g08800Bhi10G000748Wax gourdcpewgoB0337
Cp4.1LG15g08800Bhi05G001748Wax gourdcpewgoB0328
Cp4.1LG15g08800CsGy6G011360Cucumber (Gy14) v2cgybcpeB750
Cp4.1LG15g08800CsGy7G010110Cucumber (Gy14) v2cgybcpeB912
Cp4.1LG15g08800Carg15667Silver-seed gourdcarcpeB0751
Cp4.1LG15g08800Carg04675Silver-seed gourdcarcpeB0541
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG15g08800Cp4.1LG04g02270Cucurbita pepo (Zucchini)cpecpeB267
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG15g08800Cucurbita pepo (Zucchini)cpecpeB256
Cp4.1LG15g08800Cucurbita pepo (Zucchini)cpecpeB277
Cp4.1LG15g08800Cucumber (Gy14) v1cgycpeB0288
Cp4.1LG15g08800Cucumber (Gy14) v1cgycpeB0632
Cp4.1LG15g08800Cucurbita maxima (Rimu)cmacpeB115
Cp4.1LG15g08800Cucurbita maxima (Rimu)cmacpeB522
Cp4.1LG15g08800Cucurbita maxima (Rimu)cmacpeB558
Cp4.1LG15g08800Cucurbita moschata (Rifu)cmocpeB093
Cp4.1LG15g08800Cucurbita moschata (Rifu)cmocpeB481
Cp4.1LG15g08800Cucurbita moschata (Rifu)cmocpeB512
Cp4.1LG15g08800Cucurbita moschata (Rifu)cmocpeB567
Cp4.1LG15g08800Wild cucumber (PI 183967)cpecpiB252
Cp4.1LG15g08800Wild cucumber (PI 183967)cpecpiB260
Cp4.1LG15g08800Cucumber (Chinese Long) v2cpecuB252
Cp4.1LG15g08800Cucumber (Chinese Long) v2cpecuB259
Cp4.1LG15g08800Bottle gourd (USVL1VR-Ls)cpelsiB198
Cp4.1LG15g08800Bottle gourd (USVL1VR-Ls)cpelsiB201
Cp4.1LG15g08800Watermelon (Charleston Gray)cpewcgB215
Cp4.1LG15g08800Watermelon (Charleston Gray)cpewcgB230
Cp4.1LG15g08800Watermelon (97103) v1cpewmB234
Cp4.1LG15g08800Watermelon (97103) v1cpewmB265
Cp4.1LG15g08800Melon (DHL92) v3.5.1cpemeB211
Cp4.1LG15g08800Melon (DHL92) v3.5.1cpemeB226
Cp4.1LG15g08800Melon (DHL92) v3.6.1cpemedB252
Cp4.1LG15g08800Silver-seed gourdcarcpeB0042
Cp4.1LG15g08800Silver-seed gourdcarcpeB0464