MELO3C012401 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C012401
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	RNA-binding protein RZ-1
Location	chr10 : 700875 .. 705867 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GGTGTTTCCCTTTCTCCACTTTCATCATTTTCTTCAGTTTCTCACTATCAATTGTTCTTTACGGTAACAAATTTACTGGATGCCTTTCGTTTTCGTCGATTTTTTTCTAAAATTTTGCTCCTATTTCTCAAATTACTTTGGTTTTTGCTGTGCAGGAGGATATTTTTCCCCCTGAAATCCGGAGCTTGATATGGCCGGAAGAGAAGAGTACCGAATATTTGTCGGCGGTTTGTCGTGGGACATCACGGAGCGTCAGCTTGAGAATGCCTTCAATCGTTTCGGCAAAATTATCGATTCTCAGGTTACCCTTATTTATATATATTCGTCGATTTGTAGTTTGATCTTTATTGAACATATTGGACTTCGTCTAAACTGAACACATGGGAATAAGTTGTTCATTTATATCTTATAGGAGAAGTAAAGAGAGGAAATTGTAAAATGGGTGTCATTCCGTGCTGATGTTCATATGAAGAATAATATTTGTAAATTTGCACCCCTTTTCCCTCTGATGATAGCATGTCAAAACACCGCAGATGAACTGCAAGATTAACTTTTACCATCTGAAGCCATGTTTTTTTTTTTTTTGTTTTTTTTCTCAGTATTGTTTTATGGTACCTTAATTCTTTTTTTCTCAACCTCCTCTTCCTGATGATGTTTCTTTTTCCCTTGTGAATGAGGACGCTGTTAATGAACTTTTTGGGAAGCGGTTTCACTATCCATGTAAAGTTGAATGCATCAAGATGCTGAAGGTCATAGGGTTGTTTGTGCTTAAGTATAATTTGATTTAGATCTGCTGGTTAAGAAAAAGTGCTACCATCTGGATATTGGAAATATTGTTGCCTGCAAACTCAATCTTGTGCTCTAGCTGATTGGGGTTTGGTAGGATTTTAATATGCAAATTCAGCGACTAATTGTTTCTGTGGGATAAAAGAACTTGACATTCTTGATTTAAACCAGAGGAACTATTAACAAGTGATGTGCTGATGCCTGCTCGAGCAAACCTTTCTTGTTTTATTGTTCCTTGATGTTTTTGATGAGGAAACTGAAGTCACTAAAATGTTTCAGGATCCGACTAATAAATGTTCTAGTATTTTCTTGGTGAATTTTATCTTGCTTTGGATGATTATTAAGCCCAATTTATCCTTGGATTACCCATTCTTACCAATGGTACGGCCAAAAGTTAATGAAGAAGTTGATGAGGTTTGCTAAGTCATCTAATCTCAGAAAGTTTTCAGAAGCCATATGTCATAGATGGAACGTTTTGTTGTACGAAGTACTGGCTGCTTCTTTGTAATGCTTTCTTCATGTTCCTGTCCGTGACTAATTACTATTCACGTGAGAGATAGCTGGTTTCTCATTTGCTAGTTTCACTGGTGAGTTGTCAGTTTGATTTAAGATGAAGAAGAAAATGTAAAAGTGGTGCATGTTTTATGGCTCAGGTTTATGATAGCATGCAAAGGTACAGTTTTGGGAGATCAATAACCATTTCATTCTTTTGAGTGGGTACTGCATCTTTGAATTTCATTTTTTTGTGATGAAGTTGCCAGAGTACCCTACATTTCCGAGCATGCTCAGAAAGTTATTTGTACTGGTTTCTGTTTAGCAGCTTATGTGGCTAGAAATTGTACTAGTGATGCCAGGCTTAGCAGCTCAGACATTTTCTGAAGAATCGGCCAAACTGCATTTGTAGTCTTTAGTTTGACATGGTTTCCTCCTTGTACGATGTCAGCTGAATTTTAAATGTCTGCTTGAGGACCTTTTCTGATCAGTTGTTATCTTTGTTGGTGAGCTTGTTAAGTAATATGTGATGGACCGGACTCTGGAATGATGTCGATATTATTGCCATCCAAAGGTTCCAGAGTTCTTAGGCCCTCAGTTTTCTGTTATGTCCGAGCATTATGAATTTCTATTTGCTGGGTATAGTACTGCAGTCTGCAAGAGAGCAATTGGATCTGAAGCAAAATTTGAGTTCCTGTAGGTGCAATGTTGCAGTTCCTATTTAGAGGAATGGGTTTAGGTTGTGGCAACGTGAGAAACTATGGAGCTGTAGTTTTTCATTCCTTTGTTTGCATCCTTTTCCTGTTGTTTGGAGTCGTTTCTCAAGATTTGCCAAGAATGCTGCTGTTCTGTTTTCCTTTTTTGTGGTGTTGGTGTGCTAGTTTCCTCATTTTATACTCATCGACAGTCTTTGTCTTACCAAAGTTTGAATTCATCGATTATTGAATCTATTTAAACTTAAGCGGGGTTGAATATGAATATGTGCCTAGTTAAGTATGGTTGCCAGGCAAGAAGTTTTGTTGTTGTCAAATTTTCTAATACAGCCTCTTGTCCACGAATTCTGTGGTTGCCATGCAAGTTGTCGTCATCAAGTTTTCTAGTACAGCCTCTTGTGTCCACAAGCTGATGGGATCTCTATTGCAGAATTAGTTGGCATCTCAATTGCCTGAAATTTTGCTGTGTCTTCTTGCCTGCGTTTCCTAGACCATTCTTCCTGGAAGATATGTTGTTTAAGGATTCATCTTTCTTTTTTGAGATTTATTCCACCATCTATTTCACAGCACGTCCCAATATGATCATTTGACAACAACATCGAGGTTAACAAATCACCTAGTTGGAGTAGTACACAAATCAAATGAAGTGTTTGTAGTGGGCTTTTTTTTAGTTAAGATTGACTTTGAGTACCATTTTTGGATGGCTGACTGCTGAGAAGAAGGCCATGTAGCCATGATTTTATGGCATTGTTTCTTTTGAATAAAAGGCGACTAGAGATGTAAGATACTCTCACTTCAGAAGATAGACCTAAAGATGTGCAGGTGCTTTTGTTTTGTTAAGGAATTATGTAACATGTTGCCATGAGTTCATAAACGGAAGAAAAAGTAAGTTGTCGGACTTTTTAAAACATTTTTATGGTGTTATTATCAGTTACTTTGAACGAGTTCTCTTTGATGTTGTACTTTTTTTTTTTTAAATTGTGTATACAGCATGTGATACGCTAAACTTCATCACCTGCTTGTACCCATAACTTATTCTGTTATCTACTTCTCTAATGGAGTGTAGGTTTGTTAACCATGTGTCCTGAATGATAATTTGATGGAGTTTTAACATCTATTTTAAGTAGTTGTTGGAGTTCGAAACCTCTAGATCATGGTAACAGTTCGGTATTGAATCTATATCTATACCTTGTGACTTTCTCACAATTGTAATTAAGGCTTCAAGCCCGAAATTCGTTATAGTTTTCCATGCTTTTAGATTAACCTTGTGACCACTCCAAACTTTTATGGGCTATGAACTGGGATCTTAAATACCAAAACAAACCACCTTATATTGGTGGTCAGGTTGTAGAGTTTATCTTGAAGCCTGTCATATTTGAACAGTGAGGAGGTGGGAACTCTGGGTTGTGGTGGTCTTCATCCCTGTTTCTTTGATGCTGGTTTTTTGTTAGGTTGGACTAATTCACTTTATAATCTAGGGTTAGACTATACTGATGGCTAGCAGGTTTCTAGTTTTCACTTAGTATACATTATTAGCATGGGATGTACTTTAGTAGCTCTGTTCTAATGACTTGATTTAAGTTTTATTGGCTATTCAATTGATTTGTTCTTTGGCATTCCTGTAGATCATGTTGGAAAAGAATACAGGCCGCCCACGTGGCTTTGGTTTTATTACATTTTCAGATCGGCGGGGAATGGATGATGCTATCAGAGAGATGCATGGACAGGAGTTTGGAGAACGAATAATTTCAGTGAACAAGGCTGAACCTAAAATGGGAGAAGATATGGACCATGGTTACAGGGGCGGAGGGTACTCAACTGGTGGCAGGGGTAGCTATGGGGGTGGGGGAGGAGATAGATCTGCAAGGCAAGACGAGTGCTTCAAATGTGGGCGCCTTGGACACTGGGCTAGAGATTGTCCTTCAGTTGGTGGTGGCCGAGGAAGGGGAGGAGACTCATTTCTTGCACGTTCGCGGCTTGGTGATGGTGATCGTGGGGATCGTTTTGCTGGAGATACCAATCGTTATGTGGATGATCGTTACGAAGGTGGTGGGCGCTTTGGAGATAGAGATCGATTTGATAGCAGCAGCAGGGACAACAAATATGGAAGTCGTGATCGCTATGTTAGTGACAGGTACTGACTGATGTTTTCTGTCGATTTTCAGGGTATTATTTGTTCGTTTAAAGTAATTATGACTAGAAAATAGTAAATTGGCAGAATAGCGATCCAATATTATATTTTTCTTTTTGTTGATTAATTGATGACTGCTCAATTGTTTTCGTTGCAGCATCATGTAGTTAACCAATCACATTCCTGATTTTTTGCATAAATCTGGCAGGTATCCACCTGGTGGAGATCGCTTTGGAAGCGGTAGGTATAATAACGATTCTGATCGTTTTCCTGTAAATGGCTATGGCAAAGATAGAGGGTATTATAGAGATGGACCTCGTGGGGTTGATAAGTATGGAAGTGGTGGTCCTGCACGCGATGAGGGAAGAAGCTATAGAAACAGACCAGCTCCTTATGATCGCCCTAGCCGTGGTGGGCGGCCATCATCATTTGATCGTTATTGACTGTTTTTATTGTTAACACATTATCAGATTTATCAGAAGTACTACATGCTCGGTGTTGTGCTGTTAGTTACTAGGATTGTAGTTGGAGTACCGATGCCTGACTGAGACAGATTGTTCTGGTGTTGTGTAGTTTTCATGGATCTGAGTTTTTTTGCTCGGAGACACATAAATGCTCTAAAGAACGATGAATGCAAAGAGAACAGATTTAAGTTGACAATTTTGTGGTTTCTTAAATGTCGAGTTGAATCTCAATGTGATAATTCATAGTTCGTAAACAAATTAGTGAAGATACAACTAGAGACGCCAGTAGCATCATATTCGTGTATTGAACAGAGGTATGATGATAGAGGAAGTAAATATGAGAGATGAAGCTGGAAAATTGGCCTCCCTATAAGACATCAAAGAACAAACTCTGCGGCTATCGGGAA

mRNA sequence

GGTGTTTCCCTTTCTCCACTTTCATCATTTTCTTCAGTTTCTCACTATCAATTGTTCTTTACGGAGGATATTTTTCCCCCTGAAATCCGGAGCTTGATATGGCCGGAAGAGAAGAGTACCGAATATTTGTCGGCGGTTTGTCGTGGGACATCACGGAGCGTCAGCTTGAGAATGCCTTCAATCGTTTCGGCAAAATTATCGATTCTCAGATCATGTTGGAAAAGAATACAGGCCGCCCACGTGGCTTTGGTTTTATTACATTTTCAGATCGGCGGGGAATGGATGATGCTATCAGAGAGATGCATGGACAGGAGTTTGGAGAACGAATAATTTCAGTGAACAAGGCTGAACCTAAAATGGGAGAAGATATGGACCATGGTTACAGGGGCGGAGGGTACTCAACTGGTGGCAGGGGTAGCTATGGGGGTGGGGGAGGAGATAGATCTGCAAGGCAAGACGAGTGCTTCAAATGTGGGCGCCTTGGACACTGGGCTAGAGATTGTCCTTCAGTTGGTGGTGGCCGAGGAAGGGGAGGAGACTCATTTCTTGCACGTTCGCGGCTTGGTGATGGTGATCGTGGGGATCGTTTTGCTGGAGATACCAATCGTTATGTGGATGATCGTTACGAAGGTGGTGGGCGCTTTGGAGATAGAGATCGATTTGATAGCAGCAGCAGGGACAACAAATATGGAAGTCGTGATCGCTATGTTAGTGACAGGTATCCACCTGGTGGAGATCGCTTTGGAAGCGGTAGGTATAATAACGATTCTGATCGTTTTCCTGTAAATGGCTATGGCAAAGATAGAGGGTATTATAGAGATGGACCTCGTGGGGTTGATAAGTATGGAAGTGGTGGTCCTGCACGCGATGAGGGAAGAAGCTATAGAAACAGACCAGCTCCTTATGATCGCCCTAGCCGTGGTGGGCGGCCATCATCATTTGATCGTTATTGACTGTTTTTATTGTTAACACATTATCAGATTTATCAGAAGTACTACATGCTCGGTGTTGTGCTGTTAGTTACTAGGATTGTAGTTGGAGTACCGATGCCTGACTGAGACAGATTGTTCTGGTGTTGTGTAGTTTTCATGGATCTGAGTTTTTTTGCTCGGAGACACATAAATGCTCTAAAGAACGATGAATGCAAAGAGAACAGATTTAAGTTGACAATTTTGTGGTTTCTTAAATGTCGAGTTGAATCTCAATGTGATAATTCATAGTTCGTAAACAAATTAGTGAAGATACAACTAGAGACGCCAGTAGCATCATATTCGTGTATTGAACAGAGGTATGATGATAGAGGAAGTAAATATGAGAGATGAAGCTGGAAAATTGGCCTCCCTATAAGACATCAAAGAACAAACTCTGCGGCTATCGGGAA

Coding sequence (CDS)

ATGGCCGGAAGAGAAGAGTACCGAATATTTGTCGGCGGTTTGTCGTGGGACATCACGGAGCGTCAGCTTGAGAATGCCTTCAATCGTTTCGGCAAAATTATCGATTCTCAGATCATGTTGGAAAAGAATACAGGCCGCCCACGTGGCTTTGGTTTTATTACATTTTCAGATCGGCGGGGAATGGATGATGCTATCAGAGAGATGCATGGACAGGAGTTTGGAGAACGAATAATTTCAGTGAACAAGGCTGAACCTAAAATGGGAGAAGATATGGACCATGGTTACAGGGGCGGAGGGTACTCAACTGGTGGCAGGGGTAGCTATGGGGGTGGGGGAGGAGATAGATCTGCAAGGCAAGACGAGTGCTTCAAATGTGGGCGCCTTGGACACTGGGCTAGAGATTGTCCTTCAGTTGGTGGTGGCCGAGGAAGGGGAGGAGACTCATTTCTTGCACGTTCGCGGCTTGGTGATGGTGATCGTGGGGATCGTTTTGCTGGAGATACCAATCGTTATGTGGATGATCGTTACGAAGGTGGTGGGCGCTTTGGAGATAGAGATCGATTTGATAGCAGCAGCAGGGACAACAAATATGGAAGTCGTGATCGCTATGTTAGTGACAGGTATCCACCTGGTGGAGATCGCTTTGGAAGCGGTAGGTATAATAACGATTCTGATCGTTTTCCTGTAAATGGCTATGGCAAAGATAGAGGGTATTATAGAGATGGACCTCGTGGGGTTGATAAGTATGGAAGTGGTGGTCCTGCACGCGATGAGGGAAGAAGCTATAGAAACAGACCAGCTCCTTATGATCGCCCTAGCCGTGGTGGGCGGCCATCATCATTTGATCGTTATTGA

Protein sequence

MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGDRSARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDGDRGDRFAGDTNRYVDDRYEGGGRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSGRYNNDSDRFPVNGYGKDRGYYRDGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY*

Homology

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BLAST of MELO3C012401 vs. Swiss-Prot
Match: RZ1C_ARATH (Glycine-rich RNA-binding protein RZ1C OS=Arabidopsis thaliana GN=RZ1C PE=1 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 6.1e-85
Identity = 175/313 (55.91%), Postives = 210/313 (67.09%), Query Frame = 1


Query: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           MA +E  RIFVGGLS ++T+R LE AF+RFG I+D QIMLE++TGR RGFGFITF+DRR 
Sbjct: 1   MAAKEGSRIFVGGLSPEVTDRDLERAFSRFGDILDCQIMLERDTGRSRGFGFITFADRRA 60

Query: 61  MDDAIREMHGQEFGERIISVNKAEPKMGED--MDHGYRGG---GYSTGGRGSYGGGGGDR 120
           MD++IREMHG++FG+R+ISVN+AEPK+G D    HG RGG   GYS  G+GS+GGGGG  
Sbjct: 61  MDESIREMHGRDFGDRVISVNRAEPKLGRDDGESHGSRGGRDSGYSIAGKGSFGGGGGGG 120

Query: 121 S-ARQDECFKCGRLGHWARDCPSVGGGRGR--GGDSFLARSRLGDGDRGDRFAG-----D 180
               +DECFKCGR+GHWARDCPS GGGRG   GG S  A +  G   R DR+A      D
Sbjct: 121 GRVGEDECFKCGRVGHWARDCPSAGGGRGGPVGGFSSRASAYGGSDGRVDRYADRDRYVD 180

Query: 181 TNRYVDDRYEGGGRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSG-RYNNDSDR 240
             RY+DDRY+G  R+G RDRFDS      Y  RDRY SDRY    DRF  G RY+  SDR
Sbjct: 181 RERYIDDRYDGAARYGARDRFDSR---EAYIPRDRYASDRYAAPADRFAGGDRYSRGSDR 240

Query: 241 FPVNGYGKDRGYYRD--GPRGVDKYG---SGGPAR---DEGRSYRNRP-APYDRPSRGG- 285
           +P   Y K R + RD     G D+YG   +GGP R   +EGR +R+R  APY+RPSR G 
Sbjct: 241 YPPGSYDKARSFERDIAPSAGSDRYGGGRAGGPIRGGGEEGRGFRSRAGAPYERPSRSGG 300

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BLAST of MELO3C012401 vs. Swiss-Prot
Match: RZ1B_ARATH (Glycine-rich RNA-binding protein RZ1B OS=Arabidopsis thaliana GN=RZ1B PE=2 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 9.4e-78
Identity = 159/299 (53.18%), Postives = 193/299 (64.55%), Query Frame = 1


Query: 3   GREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMD 62
           G  E RIFVGGLSWD+TERQLE+ F+R+GKI + QIM+ ++TGRPRGFGFITF+DRRG D
Sbjct: 8   GNLESRIFVGGLSWDVTERQLESTFDRYGKITECQIMVGRDTGRPRGFGFITFTDRRGAD 67

Query: 63  DAIREMHGQEFGERIISVNKAEPKMG-EDMDHGYRGGGYSTGGRGSYGGGGGDRSARQDE 122
           DAI+ MHG+E G ++ISVNKAEPK+G ED+D   +GGGYS+ G+G+           +DE
Sbjct: 68  DAIKHMHGRELGNKVISVNKAEPKVGGEDVDQLKKGGGYSSRGKGT-----------EDE 127

Query: 123 CFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDGD-RGDRFAG-----------DTN 182
           CFKC R GHWARDCPS G  R R       RSR+GD D   DR+             + +
Sbjct: 128 CFKCRRPGHWARDCPSTGDDRERFRVPLAMRSRIGDIDGHRDRYGDRDLEREREREREFD 187

Query: 183 RYVDDRYE-GGGRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSGRYNNDSDRFP 242
           RY+D R +  GGR+  RDRFDS    +KY  RD Y  +RY P GDRF S RY        
Sbjct: 188 RYMDGRRDRDGGRYSYRDRFDSG---DKYEPRDHYPFERYAPPGDRFVSDRYGMPEHHLE 247

Query: 243 VNGYGKDRGYYRD--GPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSR-GGRPSSFDRY 285
               G++R Y RD       D+YG  GP RDEGR YR+RP PYDRPSR GGRPSS++R+
Sbjct: 248 NEYRGRERSYDRDRYARDTSDRYGDMGPIRDEGRPYRSRPGPYDRPSRPGGRPSSYERW 292

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BLAST of MELO3C012401 vs. Swiss-Prot
Match: RZ1A_ARATH (Glycine-rich RNA-binding protein RZ1A OS=Arabidopsis thaliana GN=RZ1A PE=1 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 1.3e-39
Identity = 109/285 (38.25%), Postives = 150/285 (52.63%), Query Frame = 1


Query: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           M+   EYR F+GGL+W  ++R L +AF ++G +++++++L+K +GR RGFGFITF +++ 
Sbjct: 1   MSEDPEYRCFIGGLAWTTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKA 60

Query: 61  MDDAIREMHGQEFGERIISVNKAEPKMG-----EDMDHGYRGGGYSTGGRGSYGGGGGDR 120
           MD+AI  M+G +   R I+V+KA+P  G      D D G   G      R S G GGGD 
Sbjct: 61  MDEAIAAMNGMDLDGRTITVDKAQPHQGGAGRDNDGDRGRDRGYDRDRSRPSGGRGGGD- 120

Query: 121 SARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDGDRGDRFAGDTNRY--VD 180
                 CFKCG+ GH+AR+CPS     G G  S           + DR++   +RY   D
Sbjct: 121 ------CFKCGKPGHFARECPSESSRDGGGRFS----------SKDDRYSSKDDRYGAKD 180

Query: 181 DRYEG-GGRFGDR-DRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSGRYNNDSDRFPVNG 240
           DRY     R+G + DR+  SS+D++Y S+D    DRY   G R G G           + 
Sbjct: 181 DRYGAKEDRYGAKDDRY--SSKDDRYSSKD----DRY---GSRDGGG-----------SR 240

Query: 241 YGKDRGYYRDGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGG 277
           YG DR   R G R  D    G P  +     R+  APYDRP  GG
Sbjct: 241 YGPDRSGERAGGRSRDGGSRGAPGGE-----RHSRAPYDRPRAGG 243

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BLAST of MELO3C012401 vs. Swiss-Prot
Match: RBG7_ARATH (Glycine-rich RNA-binding protein 7 OS=Arabidopsis thaliana GN=RBG7 PE=1 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 1.2e-27
Identity = 75/185 (40.54%), Postives = 95/185 (51.35%), Query Frame = 1


Query: 2   AGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGM 61
           +G  EYR FVGGL+W   +R LE AF ++G +IDS+I+ ++ TGR RGFGF+TF D + M
Sbjct: 3   SGDVEYRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAM 62

Query: 62  DDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYR---GGGYSTGGRGSYGGGGGDRSAR 121
            DAI  M+GQ+   R I+VN+A+ + G     G+R   GGGY +GG G Y GGGG     
Sbjct: 63  KDAIEGMNGQDLDGRSITVNEAQSR-GSGGGGGHRGGGGGGYRSGGGGGYSGGGGSYGG- 122

Query: 122 QDECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDGDRGDRFAGDTNRYVDDRYEG 181
                               GGGR  GG  +      G G    R  G    Y   R EG
Sbjct: 123 --------------------GGGRREGGGGYSG----GGGGYSSR-GGGGGSYGGGRREG 160

Query: 182 GGRFG 184
           GG +G
Sbjct: 183 GGGYG 160

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BLAST of MELO3C012401 vs. Swiss-Prot
Match: GRP2_SINAL (Glycine-rich RNA-binding protein GRP2A OS=Sinapis alba PE=2 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 2.0e-27
Identity = 70/158 (44.30%), Postives = 91/158 (57.59%), Query Frame = 1


Query: 6   EYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAI 65
           EYR FVGGL+W   ER LE AF++FG+++DS+I+ ++ TGR RGFGF+TF D + M DAI
Sbjct: 7   EYRCFVGGLAWATDERSLETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEKSMKDAI 66

Query: 66  REMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGDRSA--RQDECF 125
             M+GQ+   R I+VN+A+ + G     G RGGG    G G YGGGGG      R+   +
Sbjct: 67  EGMNGQDLDGRSITVNEAQSR-GSGAGGGGRGGGGGYRGGGGYGGGGGGYGGGRREGGGY 126

Query: 126 KCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDGDRG 162
             G  G+ +R     GGG G GG         G G+ G
Sbjct: 127 SGGGGGYSSRG----GGGGGYGGGGRRDGGGYGGGEGG 159

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BLAST of MELO3C012401 vs. TrEMBL
Match: A0A0A0KUW9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G622570 PE=4 SV=1)

HSP 1 Score: 512.7 bits (1319), Expect = 2.9e-142
Identity = 240/248 (96.77%), Postives = 242/248 (97.58%), Query Frame = 1


Query: 39  MLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGG 98
           MLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGG
Sbjct: 1   MLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGG 60

Query: 99  GYSTGGRGSYGGGGG-DRSARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGD 158
           GYSTGGRGSYGGGGG DRSARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGD
Sbjct: 61  GYSTGGRGSYGGGGGGDRSARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGD 120

Query: 159 GDRGDRFAGDTNRYVDDRYEGGGRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGS 218
            DRGDRFAGD NRYVDDRY+GGGRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGS
Sbjct: 121 SDRGDRFAGDANRYVDDRYDGGGRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGS 180

Query: 219 GRYNNDSDRFPVNGYGKDRGYYRD-GPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGG 278
            RY NDSDRFPVNGYGKDRGYYRD GPRGVDKYGSGGPARDEGRSYRNRPAPYDRP+RGG
Sbjct: 181 SRYTNDSDRFPVNGYGKDRGYYRDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPNRGG 240

Query: 279 RPSSFDRY 285
           RPSSFDRY
Sbjct: 241 RPSSFDRY 248

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BLAST of MELO3C012401 vs. TrEMBL
Match: F6HNC0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0019g05080 PE=4 SV=1)

HSP 1 Score: 444.1 bits (1141), Expect = 1.3e-121
Identity = 217/286 (75.87%), Postives = 246/286 (86.01%), Query Frame = 1


Query: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           MAG+EE RIFVGGLSWD+TERQLEN F+RFGKII+SQIMLE++TGRPRGFGFIT++DRRG
Sbjct: 1   MAGKEENRIFVGGLSWDVTERQLENTFSRFGKIIESQIMLERDTGRPRGFGFITYADRRG 60

Query: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGDRSARQD 120
           M+DAIREMHG++FG+RIISVNKA+PKMGED DHGY  GGYS+GGRGSY  GGGDRSA QD
Sbjct: 61  MEDAIREMHGRDFGDRIISVNKAQPKMGEDPDHGY-NGGYSSGGRGSY--GGGDRSAGQD 120

Query: 121 ECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDGDRGDRFAGDTNRYVDDRYEGGG 180
           +CFKCGR GHWARDCPS GGGRGRGG  F +RSR   G RGDRF G+ +RY++DRY+ GG
Sbjct: 121 DCFKCGRPGHWARDCPSSGGGRGRGGAPFPSRSRF-SGGRGDRFGGERDRYMEDRYD-GG 180

Query: 181 RFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSGRYNNDSDRFPVNGYGKDRGYYR 240
           R+GDRDRF+  SRDNKYG+RDRYV+DRY P GDRF   RY   SDR+P NGYGKDRGY R
Sbjct: 181 RYGDRDRFE--SRDNKYGTRDRYVNDRYAPSGDRFSGDRYGG-SDRYPQNGYGKDRGYDR 240

Query: 241 D-GPR-GVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY 285
           D  PR G D+Y  GG AR+EGRSYRNRP PYDRP+RGGRPSSFDRY
Sbjct: 241 DAAPRGGGDRYAGGGSARNEGRSYRNRPGPYDRPNRGGRPSSFDRY 278

[Close]

BLAST of MELO3C012401 vs. TrEMBL
Match: B9HUL0_POPTR (Glycine-rich RNA-binding family protein OS=Populus trichocarpa GN=POPTR_0010s23550g PE=4 SV=1)

HSP 1 Score: 433.7 bits (1114), Expect = 1.7e-118
Identity = 215/288 (74.65%), Postives = 242/288 (84.03%), Query Frame = 1


Query: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           MAG+EE RIFVGGLSWDITERQLENAF+RFGKI++SQ+MLE++TGRPRGFGFITF+DRR 
Sbjct: 1   MAGKEENRIFVGGLSWDITERQLENAFDRFGKIVESQVMLERDTGRPRGFGFITFADRRA 60

Query: 61  MDDAIREMHGQEFGERIISVNKAEPKM-GEDMDHGYRGGGYSTGGRGSYGGGGGDRSARQ 120
           MDDAIREMHG++FG+R+ISVNKA+PK+ G+D DHGYR GGYSTG RG Y  GGGDR A Q
Sbjct: 61  MDDAIREMHGRDFGDRVISVNKAQPKIGGDDSDHGYR-GGYSTGSRGGY--GGGDRPAGQ 120

Query: 121 DECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGD-GDRGDRFAGDTNRYVDDRYEG 180
           DECFKCGR GHWARDCPS  GGRG GG    +RSR G  GDRGDRF GD +RY+DDRY+ 
Sbjct: 121 DECFKCGRSGHWARDCPS-AGGRGGGGGLISSRSRFGGAGDRGDRFGGDRDRYIDDRYD- 180

Query: 181 GGRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSGRYNNDSDRFPVNGYGKDRGY 240
           GGR+GD+DRFD  SRDNKYG RDRY SDRYPP GDRF   RY   SDR+  NGYGKD+GY
Sbjct: 181 GGRYGDKDRFD--SRDNKYGGRDRYASDRYPPNGDRFSGDRYGG-SDRYAQNGYGKDKGY 240

Query: 241 YRD-GPR-GVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY 285
            RD GPR G D+YGSGGP R++  SYRNRPAPYDRPSRGG PSSF+RY
Sbjct: 241 DRDVGPRGGNDRYGSGGPQRNDRSSYRNRPAPYDRPSRGGHPSSFERY 280

[Close]

BLAST of MELO3C012401 vs. TrEMBL
Match: M5XLS7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009799mg PE=4 SV=1)

HSP 1 Score: 430.6 bits (1106), Expect = 1.4e-117
Identity = 212/287 (73.87%), Postives = 240/287 (83.62%), Query Frame = 1


Query: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           MAG+E++RIFVGGLSWD+TERQLE+AF RFGK+ ++QIM+E++T RPRGFGFITF DRR 
Sbjct: 1   MAGKEDFRIFVGGLSWDVTERQLESAFQRFGKVHEAQIMMERDTNRPRGFGFITFGDRRA 60

Query: 61  MDDAIREMHGQEFGERIISVNKAEPKM---GEDMDHGYRGGGYSTGGRGSYGGGGGDRSA 120
           M+DAIREMHG+E G+RIISVNKA+PKM   GED+DHGYR GGYSTGGR +Y  GGGDR  
Sbjct: 61  MEDAIREMHGRELGDRIISVNKAQPKMGGGGEDLDHGYR-GGYSTGGRRNY--GGGDRPV 120

Query: 121 RQDECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDGDRGDRFAGDTNRYVDDRYE 180
            QDECFKCGR GHWARDCPS GG  GRGG SF + SR G G RGDRF GD +RYVDDRY+
Sbjct: 121 GQDECFKCGRPGHWARDCPSAGG--GRGGGSFSSHSRFGAGGRGDRFGGDRDRYVDDRYD 180

Query: 181 GGGRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSGRYNNDSDRFPVNGYGKDRG 240
            GGR+G+RDRFD  SR++KYGSRDRYVSDRY P GDRF S RY   SDR+P NGYGKDRG
Sbjct: 181 -GGRYGERDRFD--SREDKYGSRDRYVSDRY-PAGDRFASDRYGG-SDRYPQNGYGKDRG 240

Query: 241 YYRDGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY 285
           Y RD   G D+YGSGGPARDEG +YR+R  PYDRPSRGGRPSSFDRY
Sbjct: 241 YDRDARGGSDRYGSGGPARDEGGNYRSRAGPYDRPSRGGRPSSFDRY 277

[Close]

BLAST of MELO3C012401 vs. TrEMBL
Match: A0A0D2RS21_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G235100 PE=4 SV=1)

HSP 1 Score: 428.7 bits (1101), Expect = 5.5e-117
Identity = 210/285 (73.68%), Postives = 238/285 (83.51%), Query Frame = 1


Query: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           MAG+EE RIFVGGLSWD+TERQLE+AF+ FGKI++SQIMLE++TGRPRGFGFITF+DRR 
Sbjct: 1   MAGKEENRIFVGGLSWDVTERQLEHAFSPFGKILESQIMLERDTGRPRGFGFITFADRRS 60

Query: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGDRSARQD 120
           MD+AIREMHG+E GER ISVNKA+PKMGED+DHGYR GGYS+ GRG Y   GGDR   QD
Sbjct: 61  MDEAIREMHGRELGERTISVNKAQPKMGEDLDHGYR-GGYSSSGRGRY--AGGDRPVAQD 120

Query: 121 ECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDG-DRGDRFAGDTNRYVDDRYEGG 180
           ECFKCGR GHWARDCPS GGGRG  G  F +RSR G   DRGDRF  D +RY+DDRY+ G
Sbjct: 121 ECFKCGRFGHWARDCPSAGGGRGGSGGMFSSRSRYGGADDRGDRFR-DRDRYIDDRYD-G 180

Query: 181 GRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSGRYNNDSDRFPVNGYGKDRGYY 240
           GR+GDRDRFD  SRD++YGSRDRY+SDRYPP GDRFG  RY   SDRFP NG+GK+RGY 
Sbjct: 181 GRYGDRDRFD--SRDDRYGSRDRYISDRYPPTGDRFGD-RYAG-SDRFPQNGFGKERGYR 240

Query: 241 RDGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY 285
              PRG D+YG+GGPAR++GRSYRNR  PYDRP  GGRPSSFDRY
Sbjct: 241 DVAPRGNDRYGAGGPARNDGRSYRNRTGPYDRPGMGGRPSSFDRY 276

[Close]

BLAST of MELO3C012401 vs. TAIR10
Match: AT5G04280.1 (AT5G04280.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain)

HSP 1 Score: 315.5 bits (807), Expect = 3.4e-86
Identity = 175/313 (55.91%), Postives = 210/313 (67.09%), Query Frame = 1


Query: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           MA +E  RIFVGGLS ++T+R LE AF+RFG I+D QIMLE++TGR RGFGFITF+DRR 
Sbjct: 1   MAAKEGSRIFVGGLSPEVTDRDLERAFSRFGDILDCQIMLERDTGRSRGFGFITFADRRA 60

Query: 61  MDDAIREMHGQEFGERIISVNKAEPKMGED--MDHGYRGG---GYSTGGRGSYGGGGGDR 120
           MD++IREMHG++FG+R+ISVN+AEPK+G D    HG RGG   GYS  G+GS+GGGGG  
Sbjct: 61  MDESIREMHGRDFGDRVISVNRAEPKLGRDDGESHGSRGGRDSGYSIAGKGSFGGGGGGG 120

Query: 121 S-ARQDECFKCGRLGHWARDCPSVGGGRGR--GGDSFLARSRLGDGDRGDRFAG-----D 180
               +DECFKCGR+GHWARDCPS GGGRG   GG S  A +  G   R DR+A      D
Sbjct: 121 GRVGEDECFKCGRVGHWARDCPSAGGGRGGPVGGFSSRASAYGGSDGRVDRYADRDRYVD 180

Query: 181 TNRYVDDRYEGGGRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSG-RYNNDSDR 240
             RY+DDRY+G  R+G RDRFDS      Y  RDRY SDRY    DRF  G RY+  SDR
Sbjct: 181 RERYIDDRYDGAARYGARDRFDSR---EAYIPRDRYASDRYAAPADRFAGGDRYSRGSDR 240

Query: 241 FPVNGYGKDRGYYRD--GPRGVDKYG---SGGPAR---DEGRSYRNRP-APYDRPSRGG- 285
           +P   Y K R + RD     G D+YG   +GGP R   +EGR +R+R  APY+RPSR G 
Sbjct: 241 YPPGSYDKARSFERDIAPSAGSDRYGGGRAGGPIRGGGEEGRGFRSRAGAPYERPSRSGG 300

[Close]

BLAST of MELO3C012401 vs. TAIR10
Match: AT1G60650.1 (AT1G60650.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain)

HSP 1 Score: 291.6 bits (745), Expect = 5.3e-79
Identity = 159/299 (53.18%), Postives = 193/299 (64.55%), Query Frame = 1


Query: 3   GREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMD 62
           G  E RIFVGGLSWD+TERQLE+ F+R+GKI + QIM+ ++TGRPRGFGFITF+DRRG D
Sbjct: 8   GNLESRIFVGGLSWDVTERQLESTFDRYGKITECQIMVGRDTGRPRGFGFITFTDRRGAD 67

Query: 63  DAIREMHGQEFGERIISVNKAEPKMG-EDMDHGYRGGGYSTGGRGSYGGGGGDRSARQDE 122
           DAI+ MHG+E G ++ISVNKAEPK+G ED+D   +GGGYS+ G+G+           +DE
Sbjct: 68  DAIKHMHGRELGNKVISVNKAEPKVGGEDVDQLKKGGGYSSRGKGT-----------EDE 127

Query: 123 CFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDGD-RGDRFAG-----------DTN 182
           CFKC R GHWARDCPS G  R R       RSR+GD D   DR+             + +
Sbjct: 128 CFKCRRPGHWARDCPSTGDDRERFRVPLAMRSRIGDIDGHRDRYGDRDLEREREREREFD 187

Query: 183 RYVDDRYE-GGGRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSGRYNNDSDRFP 242
           RY+D R +  GGR+  RDRFDS    +KY  RD Y  +RY P GDRF S RY        
Sbjct: 188 RYMDGRRDRDGGRYSYRDRFDSG---DKYEPRDHYPFERYAPPGDRFVSDRYGMPEHHLE 247

Query: 243 VNGYGKDRGYYRD--GPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSR-GGRPSSFDRY 285
               G++R Y RD       D+YG  GP RDEGR YR+RP PYDRPSR GGRPSS++R+
Sbjct: 248 NEYRGRERSYDRDRYARDTSDRYGDMGPIRDEGRPYRSRPGPYDRPSRPGGRPSSYERW 292

[Close]

BLAST of MELO3C012401 vs. TAIR10
Match: AT3G26420.1 (AT3G26420.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain)

HSP 1 Score: 164.9 bits (416), Expect = 7.5e-41
Identity = 109/285 (38.25%), Postives = 150/285 (52.63%), Query Frame = 1


Query: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           M+   EYR F+GGL+W  ++R L +AF ++G +++++++L+K +GR RGFGFITF +++ 
Sbjct: 1   MSEDPEYRCFIGGLAWTTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKA 60

Query: 61  MDDAIREMHGQEFGERIISVNKAEPKMG-----EDMDHGYRGGGYSTGGRGSYGGGGGDR 120
           MD+AI  M+G +   R I+V+KA+P  G      D D G   G      R S G GGGD 
Sbjct: 61  MDEAIAAMNGMDLDGRTITVDKAQPHQGGAGRDNDGDRGRDRGYDRDRSRPSGGRGGGD- 120

Query: 121 SARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDGDRGDRFAGDTNRY--VD 180
                 CFKCG+ GH+AR+CPS     G G  S           + DR++   +RY   D
Sbjct: 121 ------CFKCGKPGHFARECPSESSRDGGGRFS----------SKDDRYSSKDDRYGAKD 180

Query: 181 DRYEG-GGRFGDR-DRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSGRYNNDSDRFPVNG 240
           DRY     R+G + DR+  SS+D++Y S+D    DRY   G R G G           + 
Sbjct: 181 DRYGAKEDRYGAKDDRY--SSKDDRYSSKD----DRY---GSRDGGG-----------SR 240

Query: 241 YGKDRGYYRDGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGG 277
           YG DR   R G R  D    G P  +     R+  APYDRP  GG
Sbjct: 241 YGPDRSGERAGGRSRDGGSRGAPGGE-----RHSRAPYDRPRAGG 243

[Close]

BLAST of MELO3C012401 vs. TAIR10
Match: AT2G21660.1 (AT2G21660.1 cold, circadian rhythm, and rna binding 2)

HSP 1 Score: 125.2 bits (313), Expect = 6.6e-29
Identity = 75/185 (40.54%), Postives = 95/185 (51.35%), Query Frame = 1


Query: 2   AGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGM 61
           +G  EYR FVGGL+W   +R LE AF ++G +IDS+I+ ++ TGR RGFGF+TF D + M
Sbjct: 3   SGDVEYRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAM 62

Query: 62  DDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYR---GGGYSTGGRGSYGGGGGDRSAR 121
            DAI  M+GQ+   R I+VN+A+ + G     G+R   GGGY +GG G Y GGGG     
Sbjct: 63  KDAIEGMNGQDLDGRSITVNEAQSR-GSGGGGGHRGGGGGGYRSGGGGGYSGGGGSYGG- 122

Query: 122 QDECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDGDRGDRFAGDTNRYVDDRYEG 181
                               GGGR  GG  +      G G    R  G    Y   R EG
Sbjct: 123 --------------------GGGRREGGGGYSG----GGGGYSSR-GGGGGSYGGGRREG 160

Query: 182 GGRFG 184
           GG +G
Sbjct: 183 GGGYG 160

[Close]

BLAST of MELO3C012401 vs. TAIR10
Match: AT4G39260.1 (AT4G39260.1 cold, circadian rhythm, and RNA binding 1)

HSP 1 Score: 122.5 bits (306), Expect = 4.3e-28
Identity = 70/177 (39.55%), Postives = 93/177 (52.54%), Query Frame = 1


Query: 6   EYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAI 65
           EYR FVGGL+W   +  L+  F++FG +IDS+I+ ++ +GR RGFGF+TF D + M DAI
Sbjct: 5   EYRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAI 64

Query: 66  REMHGQEFGERIISVNKAEPK--MGEDMDHGYRGGGYSTGGRGSYGGGGGDRSARQDECF 125
            EM+G+E   R+I+VN+A+ +   G     G  GGGY +GG G Y GGGG         +
Sbjct: 65  EEMNGKELDGRVITVNEAQSRGSGGGGGGRGGSGGGYRSGGGGGYSGGGGGG-------Y 124

Query: 126 KCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDGDRGDRFAGDTNRYVDDRYEGGG 181
             G  G + R     G G G GG  +    R   G  G    G         Y GGG
Sbjct: 125 SGGGGGGYERRSGGYGSGGGGGGRGYGGGGRREGGGYGGGDGGS--------YGGGG 166

[Close]

BLAST of MELO3C012401 vs. NCBI nr
Match: gi|659091966|ref|XP_008446829.1| (PREDICTED: glycine-rich RNA-binding protein-like isoform X1 [Cucumis melo])

HSP 1 Score: 609.0 bits (1569), Expect = 4.3e-171
Identity = 284/284 (100.00%), Postives = 284/284 (100.00%), Query Frame = 1


Query: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG
Sbjct: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60

Query: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGDRSARQD 120
           MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGDRSARQD
Sbjct: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGDRSARQD 120

Query: 121 ECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDGDRGDRFAGDTNRYVDDRYEGGG 180
           ECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDGDRGDRFAGDTNRYVDDRYEGGG
Sbjct: 121 ECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDGDRGDRFAGDTNRYVDDRYEGGG 180

Query: 181 RFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSGRYNNDSDRFPVNGYGKDRGYYR 240
           RFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSGRYNNDSDRFPVNGYGKDRGYYR
Sbjct: 181 RFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSGRYNNDSDRFPVNGYGKDRGYYR 240

Query: 241 DGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY 285
           DGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY
Sbjct: 241 DGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY 284

[Close]

BLAST of MELO3C012401 vs. NCBI nr
Match: gi|449449318|ref|XP_004142412.1| (PREDICTED: glycine-rich RNA-binding protein RZ1C-like [Cucumis sativus])

HSP 1 Score: 588.6 bits (1516), Expect = 6.0e-165
Identity = 278/286 (97.20%), Postives = 280/286 (97.90%), Query Frame = 1


Query: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG
Sbjct: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60

Query: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGG-DRSARQ 120
           MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGG DRSARQ
Sbjct: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGGDRSARQ 120

Query: 121 DECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDGDRGDRFAGDTNRYVDDRYEGG 180
           DECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGD DRGDRFAGD NRYVDDRY+GG
Sbjct: 121 DECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDSDRGDRFAGDANRYVDDRYDGG 180

Query: 181 GRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSGRYNNDSDRFPVNGYGKDRGYY 240
           GRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGS RY NDSDRFPVNGYGKDRGYY
Sbjct: 181 GRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSSRYTNDSDRFPVNGYGKDRGYY 240

Query: 241 RD-GPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY 285
           RD GPRGVDKYGSGGPARDEGRSYRNRPAPYDRP+RGGRPSSFDRY
Sbjct: 241 RDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPNRGGRPSSFDRY 286

[Close]

BLAST of MELO3C012401 vs. NCBI nr
Match: gi|659091970|ref|XP_008446831.1| (PREDICTED: glycine-rich RNA-binding protein 3, mitochondrial-like isoform X2 [Cucumis melo])

HSP 1 Score: 533.1 bits (1372), Expect = 3.0e-148
Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 1


Query: 39  MLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGG 98
           MLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGG
Sbjct: 1   MLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGG 60

Query: 99  GYSTGGRGSYGGGGGDRSARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDG 158
           GYSTGGRGSYGGGGGDRSARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDG
Sbjct: 61  GYSTGGRGSYGGGGGDRSARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDG 120

Query: 159 DRGDRFAGDTNRYVDDRYEGGGRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSG 218
           DRGDRFAGDTNRYVDDRYEGGGRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSG
Sbjct: 121 DRGDRFAGDTNRYVDDRYEGGGRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSG 180

Query: 219 RYNNDSDRFPVNGYGKDRGYYRDGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRP 278
           RYNNDSDRFPVNGYGKDRGYYRDGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRP
Sbjct: 181 RYNNDSDRFPVNGYGKDRGYYRDGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRP 240

Query: 279 SSFDRY 285
           SSFDRY
Sbjct: 241 SSFDRY 246

[Close]

BLAST of MELO3C012401 vs. NCBI nr
Match: gi|700197065|gb|KGN52242.1| (hypothetical protein Csa_5G622570 [Cucumis sativus])

HSP 1 Score: 512.7 bits (1319), Expect = 4.2e-142
Identity = 240/248 (96.77%), Postives = 242/248 (97.58%), Query Frame = 1


Query: 39  MLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGG 98
           MLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGG
Sbjct: 1   MLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGG 60

Query: 99  GYSTGGRGSYGGGGG-DRSARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGD 158
           GYSTGGRGSYGGGGG DRSARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGD
Sbjct: 61  GYSTGGRGSYGGGGGGDRSARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGD 120

Query: 159 GDRGDRFAGDTNRYVDDRYEGGGRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGS 218
            DRGDRFAGD NRYVDDRY+GGGRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGS
Sbjct: 121 SDRGDRFAGDANRYVDDRYDGGGRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGS 180

Query: 219 GRYNNDSDRFPVNGYGKDRGYYRD-GPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGG 278
            RY NDSDRFPVNGYGKDRGYYRD GPRGVDKYGSGGPARDEGRSYRNRPAPYDRP+RGG
Sbjct: 181 SRYTNDSDRFPVNGYGKDRGYYRDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPNRGG 240

Query: 279 RPSSFDRY 285
           RPSSFDRY
Sbjct: 241 RPSSFDRY 248

[Close]

BLAST of MELO3C012401 vs. NCBI nr
Match: gi|731412387|ref|XP_002267178.2| (PREDICTED: glycine-rich RNA-binding protein RZ1C [Vitis vinifera])

HSP 1 Score: 444.1 bits (1141), Expect = 1.8e-121
Identity = 217/286 (75.87%), Postives = 246/286 (86.01%), Query Frame = 1


Query: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60
           MAG+EE RIFVGGLSWD+TERQLEN F+RFGKII+SQIMLE++TGRPRGFGFIT++DRRG
Sbjct: 61  MAGKEENRIFVGGLSWDVTERQLENTFSRFGKIIESQIMLERDTGRPRGFGFITYADRRG 120

Query: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGDRSARQD 120
           M+DAIREMHG++FG+RIISVNKA+PKMGED DHGY  GGYS+GGRGSY  GGGDRSA QD
Sbjct: 121 MEDAIREMHGRDFGDRIISVNKAQPKMGEDPDHGY-NGGYSSGGRGSY--GGGDRSAGQD 180

Query: 121 ECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDGDRGDRFAGDTNRYVDDRYEGGG 180
           +CFKCGR GHWARDCPS GGGRGRGG  F +RSR   G RGDRF G+ +RY++DRY+ GG
Sbjct: 181 DCFKCGRPGHWARDCPSSGGGRGRGGAPFPSRSRF-SGGRGDRFGGERDRYMEDRYD-GG 240

Query: 181 RFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSGRYNNDSDRFPVNGYGKDRGYYR 240
           R+GDRDRF+  SRDNKYG+RDRYV+DRY P GDRF   RY   SDR+P NGYGKDRGY R
Sbjct: 241 RYGDRDRFE--SRDNKYGTRDRYVNDRYAPSGDRFSGDRYGG-SDRYPQNGYGKDRGYDR 300

Query: 241 D-GPR-GVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY 285
           D  PR G D+Y  GG AR+EGRSYRNRP PYDRP+RGGRPSSFDRY
Sbjct: 301 DAAPRGGGDRYAGGGSARNEGRSYRNRPGPYDRPNRGGRPSSFDRY 338

The following BLAST results are available for this feature:

BLAST of MELO3C012401 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RZ1C_ARATH	6.1e-85	55.91	Glycine-rich RNA-binding protein RZ1C OS=Arabidopsis thaliana GN=RZ1C PE=1 SV=1	[more]
RZ1B_ARATH	9.4e-78	53.18	Glycine-rich RNA-binding protein RZ1B OS=Arabidopsis thaliana GN=RZ1B PE=2 SV=1	[more]
RZ1A_ARATH	1.3e-39	38.25	Glycine-rich RNA-binding protein RZ1A OS=Arabidopsis thaliana GN=RZ1A PE=1 SV=1	[more]
RBG7_ARATH	1.2e-27	40.54	Glycine-rich RNA-binding protein 7 OS=Arabidopsis thaliana GN=RBG7 PE=1 SV=1	[more]
GRP2_SINAL	2.0e-27	44.30	Glycine-rich RNA-binding protein GRP2A OS=Sinapis alba PE=2 SV=1	[more]

BLAST of MELO3C012401 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KUW9_CUCSA	2.9e-142	96.77	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G622570 PE=4 SV=1	[more]
F6HNC0_VITVI	1.3e-121	75.87	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0019g05080 PE=4 SV=...	[more]
B9HUL0_POPTR	1.7e-118	74.65	Glycine-rich RNA-binding family protein OS=Populus trichocarpa GN=POPTR_0010s235...	[more]
M5XLS7_PRUPE	1.4e-117	73.87	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009799mg PE=4 SV=1	[more]
A0A0D2RS21_GOSRA	5.5e-117	73.68	Uncharacterized protein OS=Gossypium raimondii GN=B456_011G235100 PE=4 SV=1	[more]

BLAST of MELO3C012401 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G04280.1	3.4e-86	55.91	RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc...	[more]
AT1G60650.1	5.3e-79	53.18	RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc...	[more]
AT3G26420.1	7.5e-41	38.25	RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc...	[more]
AT2G21660.1	6.6e-29	40.54	cold, circadian rhythm, and rna binding 2	[more]
AT4G39260.1	4.3e-28	39.55	cold, circadian rhythm, and RNA binding 1	[more]

BLAST of MELO3C012401 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659091966\|ref\|XP_008446829.1\|	4.3e-171	100.00	PREDICTED: glycine-rich RNA-binding protein-like isoform X1 [Cucumis melo]	[more]
gi\|449449318\|ref\|XP_004142412.1\|	6.0e-165	97.20	PREDICTED: glycine-rich RNA-binding protein RZ1C-like [Cucumis sativus]	[more]
gi\|659091970\|ref\|XP_008446831.1\|	3.0e-148	100.00	PREDICTED: glycine-rich RNA-binding protein 3, mitochondrial-like isoform X2 [Cu...	[more]
gi\|700197065\|gb\|KGN52242.1\|	4.2e-142	96.77	hypothetical protein Csa_5G622570 [Cucumis sativus]	[more]
gi\|731412387\|ref\|XP_002267178.2\|	1.8e-121	75.87	PREDICTED: glycine-rich RNA-binding protein RZ1C [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000504	RRM_dom
IPR001878	Znf_CCHC
IPR012677	Nucleotide-bd_a/b_plait_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0008270	zinc ion binding
GO:0000166	nucleotide binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0005524	ATP binding

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU48892	melon EST collection version 4.0	transcribed_cluster
MU53507	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C012401T1	MELO3C012401T1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU53507	MU53507	transcribed_cluster
MU48892	MU48892	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 9..78 score: 1.8
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 8..81 score: 2.3
IPR000504	RNA recognition motif domain	PROFILE	PS50102	RRM	coord: 7..85 score: 19
IPR001878	Zinc finger, CCHC-type	GENE3D	G3DSA:4.10.60.10		coord: 119..142 score: 9.0
IPR001878	Zinc finger, CCHC-type	PFAM	PF00098	zf-CCHC	coord: 121..137 score: 1.
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 121..137 score: 1.
IPR001878	Zinc finger, CCHC-type	PROFILE	PS50158	ZF_CCHC	coord: 122..137 score: 11
IPR001878	Zinc finger, CCHC-type	unknown	SSF57756	Retrovirus zinc finger-like domains	coord: 113..137 score: 6.8
IPR012677	Nucleotide-binding alpha-beta plait domain	GENE3D	G3DSA:3.30.70.330		coord: 4..99 score: 7.6
IPR012677	Nucleotide-binding alpha-beta plait domain	unknown	SSF54928	RNA-binding domain, RBD	coord: 4..115 score: 3.39
None	No IPR available	PANTHER	PTHR24012	FAMILY NOT NAMED	coord: 4..113 score: 9.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C012401	Csa5G622570	Cucumber (Chinese Long) v2	cumeB377
MELO3C012401	Cla020538	Watermelon (97103) v1	mewmB061
MELO3C012401	Cla013740	Watermelon (97103) v1	mewmB047
MELO3C012401	ClCG05G021270	Watermelon (Charleston Gray)	mewcgB062
MELO3C012401	Cla97C05G102940	Watermelon (97103) v2	mewmbB060
MELO3C012401	Bhi07G000703	Wax gourd	mewgoB081
MELO3C012401	CSPI05G26870	Wild cucumber (PI 183967)	cpimeB369
MELO3C012401	Cucsa.308610	Cucumber (Gy14) v1	cgymeB508
MELO3C012401	CmaCh04G013880	Cucurbita maxima (Rimu)	cmameB640
MELO3C012401	CmaCh18G009090	Cucurbita maxima (Rimu)	cmameB351
MELO3C012401	CmaCh04G025520	Cucurbita maxima (Rimu)	cmameB662
MELO3C012401	CmoCh04G026690	Cucurbita moschata (Rifu)	cmomeB652
MELO3C012401	CmoCh04G014620	Cucurbita moschata (Rifu)	cmomeB631
MELO3C012401	CmoCh18G009130	Cucurbita moschata (Rifu)	cmomeB344
MELO3C012401	Lsi04G000930	Bottle gourd (USVL1VR-Ls)	lsimeB281
MELO3C012401	Cp4.1LG01g24600	Cucurbita pepo (Zucchini)	cpemeB385
MELO3C012401	Cp4.1LG01g14720	Cucurbita pepo (Zucchini)	cpemeB363
MELO3C012401	Cp4.1LG09g04100	Cucurbita pepo (Zucchini)	cpemeB024
MELO3C012401	Carg20711	Silver-seed gourd	carmeB0489
MELO3C012401	Carg01935	Silver-seed gourd	carmeB0834

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
MELO3C012401	MELO3C019833	Melon (DHL92) v3.5.1	memeB030

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C012401	Cucumber (Gy14) v2	cgybmeB319
MELO3C012401	Cucumber (Gy14) v2	cgybmeB363
MELO3C012401	Silver-seed gourd	carmeB0263
MELO3C012401	Silver-seed gourd	carmeB0684
MELO3C012401	Cucumber (Chinese Long) v3	cucmeB381
MELO3C012401	Watermelon (97103) v2	mewmbB071
MELO3C012401	Wax gourd	mewgoB062
MELO3C012401	Cucumber (Gy14) v1	cgymeB628
MELO3C012401	Cucurbita maxima (Rimu)	cmameB263
MELO3C012401	Cucurbita moschata (Rifu)	cmomeB252
MELO3C012401	Watermelon (Charleston Gray)	mewcgB072
MELO3C012401	Watermelon (97103) v1	mewmB070
MELO3C012401	Cucurbita pepo (Zucchini)	cpemeB161
MELO3C012401	Bottle gourd (USVL1VR-Ls)	lsimeB463