MELO3C010416 (gene) Melon (DHL92) v3.5.1

NameMELO3C010416
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionRibosomal-like protein, putative
Locationchr7 : 9926702 .. 9927509 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GAATATTGTAGACGTGTAGTGTAGATTTAGTTTTCTCCTCGTTTATCTGTTATCCTACCTTTTTCCCCATTAGCCATTATCTCAAAATTTGGGTGCAGCAATGGAAGATTCAGGTTCACCAGCGCCTCCAAATTCTCTCCCCCAAGCCCAACACAACATTTCTCCAGCAGTAAGAAGTAGAAGAAAGCCTCCTTCCCCACAGGAACTCATATCCCACTACGAATCCCAAGGCCATACTTCTCATGATGCTTCAATCAAGGTAATTGATGACCTTCAGAATGCTCTCTTCAAAATCATCTCCTCCGGCAGAGGCAAAAAGGACAAGCTTCTGCTTGAGACCTCCAGGAAAATCGATGCTACCAATAGTCGTCTTGCCGTTCTCGACCTCAAGTTGGATTCCAAGCCAGGTTATGCCGAGACTTTTGCCCTAGGTTTGGCTTCTGGGTCTGTTTTGAATGGACTTGGGACTGTGATGCCCCATGTTTTTGGGGCTCTCACCAATATTTGGAGTTCCGTTACTAATCTTACTAAGCATTCTTGAATTTTGATTGATACAAAACTAGTCTTCGCTTTTGTGGTTTTGTTTTTCTATTTAGTTAGTTCAGGTGGTTGATAGTTGCTGTTGTTGGTTAGATACTCGGGAACCCTAATACTTGAGTTTGAGCTATGCGTTTTCTTTTCCCCCCCTTTTTGGATTGGTCTTTCATGATTCACATTTCACTTCGAACAATGATTTTTCGGATTTCATGTAGGGTTCTTTCTCCTCCATAACAAGTCAATAAAGTTAATTAAAAATAAATGATAAAAA

mRNA sequence

GAATATTGTAGACGTGTAGTGTAGATTTAGTTTTCTCCTCGTTTATCTGTTATCCTACCTTTTTCCCCATTAGCCATTATCTCAAAATTTGGGTGCAGCAATGGAAGATTCAGGTTCACCAGCGCCTCCAAATTCTCTCCCCCAAGCCCAACACAACATTTCTCCAGCAGTAAGAAGTAGAAGAAAGCCTCCTTCCCCACAGGAACTCATATCCCACTACGAATCCCAAGGCCATACTTCTCATGATGCTTCAATCAAGGTAATTGATGACCTTCAGAATGCTCTCTTCAAAATCATCTCCTCCGGCAGAGGCAAAAAGGACAAGCTTCTGCTTGAGACCTCCAGGAAAATCGATGCTACCAATAGTCGTCTTGCCGTTCTCGACCTCAAGTTGGATTCCAAGCCAGGTTATGCCGAGACTTTTGCCCTAGGTTTGGCTTCTGGGTCTGTTTTGAATGGACTTGGGACTGTGATGCCCCATGTTTTTGGGGCTCTCACCAATATTTGGAGTTCCGTTACTAATCTTACTAAGCATTCTTGAATTTTGATTGATACAAAACTAGTCTTCGCTTTTGTGGTTTTGTTTTTCTATTTAGTTAGTTCAGGTGGTTGATAGTTGCTGTTGTTGGTTAGATACTCGGGAACCCTAATACTTGAGTTTGAGCTATGCGTTTTCTTTTCCCCCCCTTTTTGGATTGGTCTTTCATGATTCACATTTCACTTCGAACAATGATTTTTCGGATTTCATGTAGGGTTCTTTCTCCTCCATAACAAGTCAATAAAGTTAATTAAAAATAAATGATAAAAA

Coding sequence (CDS)

ATGGAAGATTCAGGTTCACCAGCGCCTCCAAATTCTCTCCCCCAAGCCCAACACAACATTTCTCCAGCAGTAAGAAGTAGAAGAAAGCCTCCTTCCCCACAGGAACTCATATCCCACTACGAATCCCAAGGCCATACTTCTCATGATGCTTCAATCAAGGTAATTGATGACCTTCAGAATGCTCTCTTCAAAATCATCTCCTCCGGCAGAGGCAAAAAGGACAAGCTTCTGCTTGAGACCTCCAGGAAAATCGATGCTACCAATAGTCGTCTTGCCGTTCTCGACCTCAAGTTGGATTCCAAGCCAGGTTATGCCGAGACTTTTGCCCTAGGTTTGGCTTCTGGGTCTGTTTTGAATGGACTTGGGACTGTGATGCCCCATGTTTTTGGGGCTCTCACCAATATTTGGAGTTCCGTTACTAATCTTACTAAGCATTCTTGA

Protein sequence

MEDSGSPAPPNSLPQAQHNISPAVRSRRKPPSPQELISHYESQGHTSHDASIKVIDDLQNALFKIISSGRGKKDKLLLETSRKIDATNSRLAVLDLKLDSKPGYAETFALGLASGSVLNGLGTVMPHVFGALTNIWSSVTNLTKHS*
BLAST of MELO3C010416 vs. TrEMBL
Match: A0A0A0L3B6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G385280 PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 6.0e-67
Identity = 133/146 (91.10%), Postives = 136/146 (93.15%), Query Frame = 1

Query: 1   MEDSGSPAPPNSLPQAQHNISPAVRSRRKPPSPQELISHYESQGHTSHDASIKVIDDLQN 60
           MEDSGSPA PNSLP+ Q NISP VRS RKPPSPQELISHYESQG TSHDASIKVIDDLQN
Sbjct: 1   MEDSGSPASPNSLPKGQDNISPTVRSVRKPPSPQELISHYESQGLTSHDASIKVIDDLQN 60

Query: 61  ALFKIISSGRGKKDKLLLETSRKIDATNSRLAVLDLKLDSKPGYAETFALGLASGSVLNG 120
           ALF+IISSGRG KDK LLETSRK+DATNSRLAVLDLKLDSKPGYAETFALGLASGSVLNG
Sbjct: 61  ALFRIISSGRGNKDKRLLETSRKLDATNSRLAVLDLKLDSKPGYAETFALGLASGSVLNG 120

Query: 121 LGTVMPHVFGALTNIWSSVTNLTKHS 147
            GTVMPHVF ALTNIWSSVTNLTKHS
Sbjct: 121 FGTVMPHVFRALTNIWSSVTNLTKHS 146

BLAST of MELO3C010416 vs. TrEMBL
Match: W9SDG9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_001366 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 1.1e-41
Identity = 92/146 (63.01%), Postives = 112/146 (76.71%), Query Frame = 1

Query: 1   MEDSGSPAPPNSLPQAQHNISPAVRSRRKPPSPQELISHYESQGHTSHDASIKVIDDLQN 60
           ME  G+P P   LPQ+Q         +RK PSPQELISHYESQG  S +AS+KVI+DLQ+
Sbjct: 1   MEKPGTPKP---LPQSQSQ-------KRKLPSPQELISHYESQGLDSREASVKVIEDLQS 60

Query: 61  ALFKIISSGRGKKDKLLLETSRKIDATNSRLAVLDLKLDSKPGYAETFALGLASGSVLNG 120
           ALF++ISSGR KKDKLLL+ SRK+D+TNSRLAV+D KLDSKPGY +TFA+GLASG  L G
Sbjct: 61  ALFRVISSGRAKKDKLLLDASRKLDSTNSRLAVVDAKLDSKPGYVQTFAIGLASGFALKG 120

Query: 121 LGTVMPHVFGALTNIWSSVTNLTKHS 147
             +V+PH  GA++ IWSSV  +TK S
Sbjct: 121 FDSVLPHFVGAVSQIWSSVRTVTKDS 136

BLAST of MELO3C010416 vs. TrEMBL
Match: I3T0J4_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 1.1e-39
Identity = 84/138 (60.87%), Postives = 110/138 (79.71%), Query Frame = 1

Query: 9   PPNSLPQAQHNISPAVRSRRKPPSPQELISHYESQGHTSHDASIKVIDDLQNALFKIISS 68
           P ++LP ++  I      ++K PSP+ELISHYESQG  + +AS+KVI+DLQ ALF +ISS
Sbjct: 5   PASNLP-SKPGIKAKPSIKKKLPSPRELISHYESQGMETEEASLKVIEDLQKALFGVISS 64

Query: 69  GRGKKDKLLLETSRKIDATNSRLAVLDLKLDSKPGYAETFALGLASGSVLNGLGTVMPHV 128
           GRGKKDKLL ++SRK+DA NSRLA+LD+KLDSKPGY ETFA+G+ASG+ L G+G V+PH+
Sbjct: 65  GRGKKDKLLSDSSRKMDAVNSRLAILDMKLDSKPGYVETFAIGVASGAALKGIGAVLPHI 124

Query: 129 FGALTNIWSSVTNLTKHS 147
            G L+ IW+SVT  +K S
Sbjct: 125 IGPLSQIWNSVTIASKSS 141

BLAST of MELO3C010416 vs. TrEMBL
Match: I3SVY9_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 1.4e-39
Identity = 83/137 (60.58%), Postives = 109/137 (79.56%), Query Frame = 1

Query: 13  LPQAQHNISPAVRSR---RKPPSPQELISHYESQGHTSHDASIKVIDDLQNALFKIISSG 72
           LP +     P ++++   +K PSP+ELISHYESQG  + +AS+KVI+DLQ ALF +ISSG
Sbjct: 4   LPASNLPSKPGIKAKPNIKKLPSPRELISHYESQGMETEEASLKVIEDLQKALFGVISSG 63

Query: 73  RGKKDKLLLETSRKIDATNSRLAVLDLKLDSKPGYAETFALGLASGSVLNGLGTVMPHVF 132
           RGKKDKLL ++SRK+DA NSRLA+LD+KLDSKPGY ETFA+G+ASG+ L G+G V+PH+ 
Sbjct: 64  RGKKDKLLSDSSRKMDAVNSRLAILDMKLDSKPGYVETFAIGVASGAALKGIGAVLPHII 123

Query: 133 GALTNIWSSVTNLTKHS 147
           G L+ IW+SVT  +K S
Sbjct: 124 GPLSQIWNSVTIASKSS 140

BLAST of MELO3C010416 vs. TrEMBL
Match: I3RZK0_MEDTR (Ribosomal-like protein, putative OS=Medicago truncatula GN=MTR_8g089655 PE=2 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 2.6e-38
Identity = 80/144 (55.56%), Postives = 111/144 (77.08%), Query Frame = 1

Query: 1   MEDSGSPAPPNSLPQAQHNISPAVRSRRKPPSPQELISHYESQGHTSHDASIKVIDDLQN 60
           ME S  P  P S+P+ +   +P    ++K PSP+ELIS+YESQG  S +AS+KVI+DLQ 
Sbjct: 4   MEQSSKPNVP-SIPEIKMKPNP----KKKIPSPKELISYYESQGMDSQEASLKVIEDLQK 63

Query: 61  ALFKIISSGRGKKDKLLLETSRKIDATNSRLAVLDLKLDSKPGYAETFALGLASGSVLNG 120
           ALF +ISSG+GKKD+L+ E+SRK+D+ N RLA+LD+KLD+KPG+ ETFA+G+ SG+ LNG
Sbjct: 64  ALFGVISSGKGKKDRLMNESSRKMDSVNQRLAILDMKLDTKPGFVETFAIGVVSGAALNG 123

Query: 121 LGTVMPHVFGALTNIWSSVTNLTK 145
           +G +MPH+   +  IW+SVT+ TK
Sbjct: 124 IGAIMPHILSPIAQIWNSVTSATK 142

BLAST of MELO3C010416 vs. TAIR10
Match: AT1G16790.1 (AT1G16790.1 ribosomal protein-related)

HSP 1 Score: 134.8 bits (338), Expect = 4.3e-32
Identity = 73/135 (54.07%), Postives = 93/135 (68.89%), Query Frame = 1

Query: 7   PAPPNSLPQAQHNISPAVRSRRKPPSPQELISHYESQGHTSHDASIKVIDDLQNALFKII 66
           PA PN+   A+   S   +  +K P+P ELISHY+ +G    +ASIKVI+DLQNAL +++
Sbjct: 4   PATPNA---AEETKSEQKQKSKKFPTPTELISHYQKRGLEPAEASIKVIEDLQNALVRVV 63

Query: 67  SSGRG--KKDKLLLETSRKIDATNSRLAVLDLKLDSKPGYAETFALGLASGSVLNGLGTV 126
           SS R    KDKL+ + +RKIDA N RLAV+D KL++KPGY ETFALGLASG+ LNG+  V
Sbjct: 64  SSSRNASSKDKLVTD-ARKIDAINGRLAVVDAKLETKPGYVETFALGLASGATLNGISAV 123

Query: 127 MPHVFGALTNIWSSV 140
            PHV   +  IWS+V
Sbjct: 124 WPHVTRGIGQIWSAV 134

BLAST of MELO3C010416 vs. NCBI nr
Match: gi|659086761|ref|XP_008444097.1| (PREDICTED: uncharacterized protein LOC103487537 [Cucumis melo])

HSP 1 Score: 290.8 bits (743), Expect = 1.3e-75
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 1

Query: 1   MEDSGSPAPPNSLPQAQHNISPAVRSRRKPPSPQELISHYESQGHTSHDASIKVIDDLQN 60
           MEDSGSPAPPNSLPQAQHNISPAVRSRRKPPSPQELISHYESQGHTSHDASIKVIDDLQN
Sbjct: 1   MEDSGSPAPPNSLPQAQHNISPAVRSRRKPPSPQELISHYESQGHTSHDASIKVIDDLQN 60

Query: 61  ALFKIISSGRGKKDKLLLETSRKIDATNSRLAVLDLKLDSKPGYAETFALGLASGSVLNG 120
           ALFKIISSGRGKKDKLLLETSRKIDATNSRLAVLDLKLDSKPGYAETFALGLASGSVLNG
Sbjct: 61  ALFKIISSGRGKKDKLLLETSRKIDATNSRLAVLDLKLDSKPGYAETFALGLASGSVLNG 120

Query: 121 LGTVMPHVFGALTNIWSSVTNLTKHS 147
           LGTVMPHVFGALTNIWSSVTNLTKHS
Sbjct: 121 LGTVMPHVFGALTNIWSSVTNLTKHS 146

BLAST of MELO3C010416 vs. NCBI nr
Match: gi|778694548|ref|XP_011653828.1| (PREDICTED: uncharacterized protein LOC101209567 [Cucumis sativus])

HSP 1 Score: 261.5 bits (667), Expect = 8.6e-67
Identity = 133/146 (91.10%), Postives = 136/146 (93.15%), Query Frame = 1

Query: 1   MEDSGSPAPPNSLPQAQHNISPAVRSRRKPPSPQELISHYESQGHTSHDASIKVIDDLQN 60
           MEDSGSPA PNSLP+ Q NISP VRS RKPPSPQELISHYESQG TSHDASIKVIDDLQN
Sbjct: 1   MEDSGSPASPNSLPKGQDNISPTVRSVRKPPSPQELISHYESQGLTSHDASIKVIDDLQN 60

Query: 61  ALFKIISSGRGKKDKLLLETSRKIDATNSRLAVLDLKLDSKPGYAETFALGLASGSVLNG 120
           ALF+IISSGRG KDK LLETSRK+DATNSRLAVLDLKLDSKPGYAETFALGLASGSVLNG
Sbjct: 61  ALFRIISSGRGNKDKRLLETSRKLDATNSRLAVLDLKLDSKPGYAETFALGLASGSVLNG 120

Query: 121 LGTVMPHVFGALTNIWSSVTNLTKHS 147
            GTVMPHVF ALTNIWSSVTNLTKHS
Sbjct: 121 FGTVMPHVFRALTNIWSSVTNLTKHS 146

BLAST of MELO3C010416 vs. NCBI nr
Match: gi|1009113981|ref|XP_015873439.1| (PREDICTED: uncharacterized protein LOC107410521 [Ziziphus jujuba])

HSP 1 Score: 177.9 bits (450), Expect = 1.3e-41
Identity = 87/137 (63.50%), Postives = 107/137 (78.10%), Query Frame = 1

Query: 10  PNSLPQAQHNISPAVRSRRKPPSPQELISHYESQGHTSHDASIKVIDDLQNALFKIISSG 69
           PNSLPQ           + K PSPQELISHYES+G  S +AS+KVI+DLQ ALF++ISSG
Sbjct: 7   PNSLPQKPGTAPSQGNKKMKLPSPQELISHYESKGLDSQEASMKVIEDLQAALFRVISSG 66

Query: 70  RGKKDKLLLETSRKIDATNSRLAVLDLKLDSKPGYAETFALGLASGSVLNGLGTVMPHVF 129
           RG+KDKLL ETSRKID TNSRLA+LD+K+DSKPGY ++FALG+ASG  L G+G+V PHV 
Sbjct: 67  RGRKDKLLAETSRKIDTTNSRLAILDMKVDSKPGYGQSFALGVASGLTLKGIGSVFPHVI 126

Query: 130 GALTNIWSSVTNLTKHS 147
           GA++ IW S  ++TK S
Sbjct: 127 GAISQIWDSARSVTKDS 143

BLAST of MELO3C010416 vs. NCBI nr
Match: gi|703070282|ref|XP_010088747.1| (hypothetical protein L484_001366 [Morus notabilis])

HSP 1 Score: 177.6 bits (449), Expect = 1.6e-41
Identity = 92/146 (63.01%), Postives = 112/146 (76.71%), Query Frame = 1

Query: 1   MEDSGSPAPPNSLPQAQHNISPAVRSRRKPPSPQELISHYESQGHTSHDASIKVIDDLQN 60
           ME  G+P P   LPQ+Q         +RK PSPQELISHYESQG  S +AS+KVI+DLQ+
Sbjct: 1   MEKPGTPKP---LPQSQSQ-------KRKLPSPQELISHYESQGLDSREASVKVIEDLQS 60

Query: 61  ALFKIISSGRGKKDKLLLETSRKIDATNSRLAVLDLKLDSKPGYAETFALGLASGSVLNG 120
           ALF++ISSGR KKDKLLL+ SRK+D+TNSRLAV+D KLDSKPGY +TFA+GLASG  L G
Sbjct: 61  ALFRVISSGRAKKDKLLLDASRKLDSTNSRLAVVDAKLDSKPGYVQTFAIGLASGFALKG 120

Query: 121 LGTVMPHVFGALTNIWSSVTNLTKHS 147
             +V+PH  GA++ IWSSV  +TK S
Sbjct: 121 FDSVLPHFVGAVSQIWSSVRTVTKDS 136

BLAST of MELO3C010416 vs. NCBI nr
Match: gi|1012225349|ref|XP_015936870.1| (PREDICTED: uncharacterized protein LOC107462752 [Arachis duranensis])

HSP 1 Score: 173.3 bits (438), Expect = 3.1e-40
Identity = 86/138 (62.32%), Postives = 108/138 (78.26%), Query Frame = 1

Query: 9   PPNSLPQAQHNISPAVRS--RRKPPSPQELISHYESQGHTSHDASIKVIDDLQNALFKII 68
           PP  +P A  +  PA +S  +RK PSP+ELISHYESQG  + +ASIKVI+DLQ ALF +I
Sbjct: 4   PP--IPNASPSSKPAPKSNPKRKIPSPKELISHYESQGMDAQEASIKVIEDLQRALFGVI 63

Query: 69  SSGRGKKDKLLLETSRKIDATNSRLAVLDLKLDSKPGYAETFALGLASGSVLNGLGTVMP 128
           SSGRGKKDKLL+++SRK+DA N RLAVLD+KLDSKPGY ETFA+G+AS + L G+G +MP
Sbjct: 64  SSGRGKKDKLLIDSSRKMDAVNGRLAVLDMKLDSKPGYVETFAIGVASAATLRGIGAIMP 123

Query: 129 HVFGALTNIWSSVTNLTK 145
           H+   +  IW+SVT  TK
Sbjct: 124 HIIAPIAQIWNSVTTATK 139

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0L3B6_CUCSA6.0e-6791.10Uncharacterized protein OS=Cucumis sativus GN=Csa_4G385280 PE=4 SV=1[more]
W9SDG9_9ROSA1.1e-4163.01Uncharacterized protein OS=Morus notabilis GN=L484_001366 PE=4 SV=1[more]
I3T0J4_LOTJA1.1e-3960.87Uncharacterized protein OS=Lotus japonicus PE=2 SV=1[more]
I3SVY9_LOTJA1.4e-3960.58Uncharacterized protein OS=Lotus japonicus PE=2 SV=1[more]
I3RZK0_MEDTR2.6e-3855.56Ribosomal-like protein, putative OS=Medicago truncatula GN=MTR_8g089655 PE=2 SV=... [more]
Match NameE-valueIdentityDescription
AT1G16790.14.3e-3254.07 ribosomal protein-related[more]
Match NameE-valueIdentityDescription
gi|659086761|ref|XP_008444097.1|1.3e-75100.00PREDICTED: uncharacterized protein LOC103487537 [Cucumis melo][more]
gi|778694548|ref|XP_011653828.1|8.6e-6791.10PREDICTED: uncharacterized protein LOC101209567 [Cucumis sativus][more]
gi|1009113981|ref|XP_015873439.1|1.3e-4163.50PREDICTED: uncharacterized protein LOC107410521 [Ziziphus jujuba][more]
gi|703070282|ref|XP_010088747.1|1.6e-4163.01hypothetical protein L484_001366 [Morus notabilis][more]
gi|1012225349|ref|XP_015936870.1|3.1e-4062.32PREDICTED: uncharacterized protein LOC107462752 [Arachis duranensis][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0044434 chloroplast part
cellular_component GO:0005840 ribosome
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU50971melon EST collection version 4.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C010416T1MELO3C010416T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU50971MU50971transcribed_cluster


The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C010416Cucumber (Gy14) v2cgybmeB253