MELO3C009107 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C009107
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionRing finger protein, putative
Locationchr4 : 32975716 .. 32976506 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAGCAATCAATAAACACATGCTAATTTTAGTTTACAACGATGGATCAAAAACTACGACGGGGGCTTACGGAAGCGCAGGGGAACAGGACGAGCAATTGGTCTAATTATGTGGGAGAAATTAATTTCGATGTGCACATGACACTAACACTGGCGGCTTTATTATGTTTACTCATTGGAGCGGTTGGAGTGAACTCTATAGTACGCTGCTTTTTGCGATGTAGGTATAGCTTTGAGACGGAGAGGGCAGAGGAGGACGCTAGCGCACAGGGGCTTAAGAAGCAAGAACTCGCTCTGATTCCGATTGGGGTCTATGGAAGTGATGCAAATATTAAGAGCACAGATTGCGCAATTTGCCTTGCCCAGTTCGAGGTGGGCGACAAGCTCAGAATGTTGCCCATTTGCAACCATGGATTCCACCTCACATGCATTGATACTTGGCTCTTGTCTAATTTCTCTTGCCCCAATTGCCGCCAATCCGTCAAACCCCCTCATACTTCACCCCACATTGTTGTGATCATAGACAGTGTAAATTAGACAATCCATGCATCCACCGCGTTGTGTGGACGACTCTTTATGTATTGGTATCTCTGTATAATTTTTGTGTTTACTGAGGCTGAACATACTTTCTTGAGGTATACTATTTTTTTCAAGTCAAAAGAAAATTAATGAAATAAGAGACGGCAATTCATGTAGACATGCTCAATCGACACAAGTGGGAGAGAAAAAAATGGGGTTAACCAATCAAGGTTTGGTTGGATAATTACACTCGAATTCATATCATATACTTGGT

mRNA sequence

AAAGCAATCAATAAACACATGCTAATTTTAGTTTACAACGATGGATCAAAAACTACGACGGGGGCTTACGGAAGCGCAGGGGAACAGGACGAGCAATTGGTCTAATTATGTGGGAGAAATTAATTTCGATGTGCACATGACACTAACACTGGCGGCTTTATTATGTTTACTCATTGGAGCGGTTGGAGTGAACTCTATAGTACGCTGCTTTTTGCGATGTAGGTATAGCTTTGAGACGGAGAGGGCAGAGGAGGACGCTAGCGCACAGGGGCTTAAGAAGCAAGAACTCGCTCTGATTCCGATTGGGGTCTATGGAAGTGATGCAAATATTAAGAGCACAGATTGCGCAATTTGCCTTGCCCAGTTCGAGGTGGGCGACAAGCTCAGAATGTTGCCCATTTGCAACCATGGATTCCACCTCACATGCATTGATACTTGGCTCTTGTCTAATTTCTCTTGCCCCAATTGCCGCCAATCCGTCAAACCCCCTCATACTTCACCCCACATTGTTGTGATCATAGACAGTGTAAATTAGACAATCCATGCATCCACCGCGTTGTGTGGACGACTCTTTATGTATTGGTATCTCTGTATAATTTTTGTGTTTACTGAGGCTGAACATACTTTCTTGAGGTATACTATTTTTTTCAAGTCAAAAGAAAATTAATGAAATAAGAGACGGCAATTCATGTAGACATGCTCAATCGACACAAGTGGGAGAGAAAAAAATGGGGTTAACCAATCAAGGTTTGGTTGGATAATTACACTCGAATTCATATCATATACTTGGT

Coding sequence (CDS)

ATGGATCAAAAACTACGACGGGGGCTTACGGAAGCGCAGGGGAACAGGACGAGCAATTGGTCTAATTATGTGGGAGAAATTAATTTCGATGTGCACATGACACTAACACTGGCGGCTTTATTATGTTTACTCATTGGAGCGGTTGGAGTGAACTCTATAGTACGCTGCTTTTTGCGATGTAGGTATAGCTTTGAGACGGAGAGGGCAGAGGAGGACGCTAGCGCACAGGGGCTTAAGAAGCAAGAACTCGCTCTGATTCCGATTGGGGTCTATGGAAGTGATGCAAATATTAAGAGCACAGATTGCGCAATTTGCCTTGCCCAGTTCGAGGTGGGCGACAAGCTCAGAATGTTGCCCATTTGCAACCATGGATTCCACCTCACATGCATTGATACTTGGCTCTTGTCTAATTTCTCTTGCCCCAATTGCCGCCAATCCGTCAAACCCCCTCATACTTCACCCCACATTGTTGTGATCATAGACAGTGTAAATTAG

Protein sequence

MDQKLRRGLTEAQGNRTSNWSNYVGEINFDVHMTLTLAALLCLLIGAVGVNSIVRCFLRCRYSFETERAEEDASAQGLKKQELALIPIGVYGSDANIKSTDCAICLAQFEVGDKLRMLPICNHGFHLTCIDTWLLSNFSCPNCRQSVKPPHTSPHIVVIIDSVN*
Homology
[Close]
BLAST of MELO3C009107 vs. Swiss-Prot
Match: ATL74_ARATH (RING-H2 finger protein ATL74 OS=Arabidopsis thaliana GN=ATL74 PE=2 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 3.1e-33
Identity = 70/145 (48.28%), Postives = 94/145 (64.83%), Query Frame = 1 

Query: 14  GNRTSN---WSNYVGEINFDVHMTLTLAALLCLLIGAVGVNSIVRCFLRCRYSFETERAE 73
           GN TS       Y  ++NFD +M + LAALLC LI A+G+NSI+RC +RC +   +  A 
Sbjct: 12  GNETSGSGGGDGYTRDMNFDANMVIILAALLCALILALGLNSILRCAMRCGFGLSSSAAA 71

Query: 74  ED-ASAQGLKKQELALIPIGVYGS-DANIKSTDCAICLAQFEVGDKLRMLPICNHGFHLT 133
              A   GLKK+EL   P+  YGS +  I +T+CAICL +F  G+++R+LP CNH FH++
Sbjct: 72  GTVADRAGLKKRELKKFPVAEYGSGEVKIAATECAICLGEFADGERVRVLPPCNHSFHMS 131

Query: 134 CIDTWLLSNFSCPNCRQSVKPPHTS 154
           CIDTWL+S+ SCPNCR S+   H +
Sbjct: 132 CIDTWLVSHSSCPNCRHSLIEVHVA 156

[Close]
BLAST of MELO3C009107 vs. Swiss-Prot
Match: ATL72_ARATH (RING-H2 finger protein ATL72 OS=Arabidopsis thaliana GN=ATL72 PE=2 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.0e-31
Identity = 77/167 (46.11%), Postives = 98/167 (58.68%), Query Frame = 1 

Query: 7   RGLTEAQGNRTSNWS----NYVGEINFDVHMTLTLAALLCLLIGAVGVNSIVRCFLRCRY 66
           R L E Q N  +N +      + +  FD +M + LAALLC LI A+ +NS +RC LR   
Sbjct: 3   RLLLEPQANAPANANPKPKGGINDTYFDTNMVIILAALLCALICALSLNSALRCVLRITR 62

Query: 67  SFETERAEEDAS-----------AQGLKKQELALIPIGVYGSDA-NIKSTDCAICLAQFE 126
            F ++    +AS           A GLKKQ L  IP+G+YGS   ++K+T+C ICL  FE
Sbjct: 63  RFTSDDQVSNASNANANLGRLAAATGLKKQALKQIPVGLYGSGIIDMKATECLICLGDFE 122

Query: 127 VGDKLRMLPICNHGFHLTCIDTWLLSNFSCPNCRQSVKPPHTSPHIV 158
            G+K+R+LP CNHGFH+ CIDTWLLS  SCP CRQS+     SP  V
Sbjct: 123 DGEKVRVLPKCNHGFHVRCIDTWLLSRSSCPTCRQSLLLEQPSPMAV 169

[Close]
BLAST of MELO3C009107 vs. Swiss-Prot
Match: ATL73_ARATH (RING-H2 finger protein ATL73 OS=Arabidopsis thaliana GN=ATL73 PE=2 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.3e-31
Identity = 66/137 (48.18%), Postives = 87/137 (63.50%), Query Frame = 1 

Query: 14  GNRTSNWSNYVGEINFDVHMTLTLAALLCLLIGAVGVNSIVRCFLRCRYSFETERAEEDA 73
           G+  SN  N     + D HM + LAALLC LI A+G+NS++RC LRC   F       D 
Sbjct: 25  GDSVSNNKNIA---SMDTHMVIILAALLCALICALGINSVLRCVLRCTRRFTPNEDPVDT 84

Query: 74  S---AQGLKKQELALIPIGVYGSDANIKSTDCAICLAQFEVGDKLRMLPICNHGFHLTCI 133
           +   A+G+KK+ L +IP+  Y  +  +K+T+C ICL  F  G+ +R+LP CNHGFH+ CI
Sbjct: 85  NANVAKGIKKRALKVIPVDSYSPELKMKATECLICLGDFVEGETVRVLPKCNHGFHVKCI 144

Query: 134 DTWLLSNFSCPNCRQSV 148
           DTWLLS+ SCP CRQS+
Sbjct: 145 DTWLLSHSSCPTCRQSL 158

[Close]
BLAST of MELO3C009107 vs. Swiss-Prot
Match: ATL78_ARATH (RING-H2 finger protein ATL78 OS=Arabidopsis thaliana GN=ATL78 PE=2 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 3.5e-24
Identity = 52/130 (40.00%), Postives = 81/130 (62.31%), Query Frame = 1 

Query: 21  SNYVGEINFDVHMTLTLAALLCLLIGAVGVNSIVRCFLRCRYSFETERAEEDASAQ---- 80
           S YVG+ NFD ++ + L+ LLC L+ ++G+NSI+RC LRC     +E   ++   +    
Sbjct: 44  SPYVGDNNFDANVVMVLSVLLCALVCSLGLNSIIRCALRCSNLVPSEAGGDNYPVRLTNT 103

Query: 81  GLKKQELALIPIGVYGSDANIKS--TDCAICLAQFEVGDKLRMLPICNHGFHLTCIDTWL 140
           G+K++ L       Y ++ N+    T+CAICL++F   +++++LP C+HGFH+ CID WL
Sbjct: 104 GVKRKALKSFQTVSYSTELNLPGLDTECAICLSEFVAEERVKLLPTCHHGFHVRCIDKWL 163

Query: 141 LSNFSCPNCR 145
            S+ SCP CR
Sbjct: 164 SSHSSCPTCR 173

[Close]
BLAST of MELO3C009107 vs. Swiss-Prot
Match: ATL8_ARATH (RING-H2 finger protein ATL8 OS=Arabidopsis thaliana GN=ATL8 PE=2 SV=2)

HSP 1 Score: 99.0 bits (245), Expect = 5.2e-20
Identity = 54/124 (43.55%), Postives = 72/124 (58.06%), Query Frame = 1 

Query: 29  FDVHMTLTLAALLCLLIGAVGVNSIVRCFLRCRY-----SFETERAEEDASAQGLKKQEL 88
           F+  + L LA LLC L   +G+ ++ RC    R      S +T      A+ +GLKK+ L
Sbjct: 24  FNSDLVLILAVLLCALTCIIGLIAVSRCAWLRRIASRNRSDQTHPPPVAAANKGLKKKVL 83

Query: 89  ALIPIGVYGSDANI--KSTDCAICLAQFEVGDKLRMLPICNHGFHLTCIDTWLLSNFSCP 146
             +P   Y  D+    K  +CAICL +F  GD+LR+LP C HGFH++CIDTWL S+ SCP
Sbjct: 84  RSLPKLTYSPDSPPAEKLVECAICLTEFAAGDELRVLPQCGHGFHVSCIDTWLGSHSSCP 143

[Close]
BLAST of MELO3C009107 vs. TrEMBL
Match: A0A0A0L9Q6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G728120 PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 1.5e-42
Identity = 86/106 (81.13%), Postives = 95/106 (89.62%), Query Frame = 1 

Query: 27  INFDVHMTLTLAALLCLLIGAVGVNSIVRCFLRCRYSFETERAEEDASAQGLKKQELALI 86
           +NFDVHM + LAALLC LIGAVGVNSI+RC LRCRYSFE ERA+E A   GLKK+E+ALI
Sbjct: 1   MNFDVHMGVILAALLCALIGAVGVNSILRCVLRCRYSFELERAQEGAGTPGLKKREIALI 60

Query: 87  PIGVYGSDANIKSTDCAICLAQFEVGDKLRMLPICNHGFHLTCIDT 133
            I VYG+DANIK+TDCAICLAQF+VGDKLRMLPICNHGFHLTCIDT
Sbjct: 61  SIKVYGTDANIKNTDCAICLAQFKVGDKLRMLPICNHGFHLTCIDT 106

[Close]
BLAST of MELO3C009107 vs. TrEMBL
Match: B9IGS7_POPTR (Zinc finger family protein OS=Populus trichocarpa GN=POPTR_0016s14320g PE=4 SV=2)

HSP 1 Score: 166.4 bits (420), Expect = 2.9e-38
Identity = 79/139 (56.83%), Postives = 102/139 (73.38%), Query Frame = 1 

Query: 12  AQGNRTSNWSNYVGEINFDVHMTLTLAALLCLLIGAVGVNSIVRCFLRCRYSFETERAEE 71
           A GNRT +  +Y+ E NFD +M + LAALLC LIGA+G+NSIVRC LRC   F  E  EE
Sbjct: 19  ANGNRTHD--SYINETNFDTNMVIILAALLCALIGALGLNSIVRCLLRCSSRFALETTEE 78

Query: 72  DAS---AQGLKKQELALIPIGVYGSDANIKSTDCAICLAQFEVGDKLRMLPICNHGFHLT 131
            A+   A GLKK++L  IP+ +YG+  +I +T+C ICL +F  G+K+R+LP CNHGFH+ 
Sbjct: 79  AAARLAATGLKKRDLRQIPVAIYGAGGSISATECPICLGEFVDGEKVRVLPKCNHGFHVR 138

Query: 132 CIDTWLLSNFSCPNCRQSV 148
           CIDTWLLS+ SCPNCR S+
Sbjct: 139 CIDTWLLSHSSCPNCRHSL 155

[Close]
BLAST of MELO3C009107 vs. TrEMBL
Match: A5BMU1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0067g02880 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 2.8e-36
Identity = 80/146 (54.79%), Postives = 101/146 (69.18%), Query Frame = 1 

Query: 21  SNYVGEINFDVHMTLTLAALLCLLIGAVGVNSIVRCFLRCRYSFETERAEEDAS---AQG 80
           S+Y  E NFD +M + LAALLC LI A+G+NSIVRC LRC      E A+E A+   A G
Sbjct: 29  SSYTNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRLAFETADETAARLAATG 88

Query: 81  LKKQELALIPIGVYGSDANIKSTDCAICLAQFEVGDKLRMLPICNHGFHLTCIDTWLLSN 140
           LKK  L  IP+ VYGS  NI +TDC ICL +FE GDK+R+LP C+HGFH+ CIDTWL+S+
Sbjct: 89  LKKSALRQIPVAVYGSGTNIPATDCPICLGEFEQGDKVRVLPKCHHGFHMKCIDTWLVSH 148

Query: 141 FSCPNCRQS-VKPPHTSPHIVVIIDS 163
            SCP CR S ++ P  S  + V +D+
Sbjct: 149 SSCPTCRHSLLEHPPASDAVDVHVDT 174

[Close]
BLAST of MELO3C009107 vs. TrEMBL
Match: A0A067JGG0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00660 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 2.8e-36
Identity = 79/137 (57.66%), Postives = 98/137 (71.53%), Query Frame = 1 

Query: 14  GNRTSNWSNYVGEINFDVHMTLTLAALLCLLIGAVGVNSIVRCFLRCRYSFETERAEEDA 73
           GNRT    N   E NFD +M + LAALLC LIGA+G+NSIVRC LRC   F TE  E+ A
Sbjct: 22  GNRTREIYN---ESNFDANMVIILAALLCALIGALGLNSIVRCALRCTRRFATETPEQAA 81

Query: 74  S---AQGLKKQELALIPIGVYGSDANIKSTDCAICLAQFEVGDKLRMLPICNHGFHLTCI 133
           +   A GLKK++L  IP+ +YG+  NI +T+C ICL  F  G+K+R+LP CNHGFH+ CI
Sbjct: 82  ARLAATGLKKRDLKQIPVAIYGTGMNIPATECPICLGDFANGEKVRVLPKCNHGFHVRCI 141

Query: 134 DTWLLSNFSCPNCRQSV 148
           DTWLLS+ SCPNCR S+
Sbjct: 142 DTWLLSHSSCPNCRLSL 155

[Close]
BLAST of MELO3C009107 vs. TrEMBL
Match: A0A061EHG8_THECC (RING/U-box superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_019707 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 6.2e-36
Identity = 78/142 (54.93%), Postives = 102/142 (71.83%), Query Frame = 1 

Query: 9   LTEAQGNRTSNWSNYVGEINFDVHMTLTLAALLCLLIGAVGVNSIVRCFLRC--RYSFET 68
           L  A GN+T +  +Y+ E NFD +M + LAALLC LI A+G+NSIVRC LRC  R++ ET
Sbjct: 106 LPPANGNKTHD--SYISEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFALET 165

Query: 69  -ERAEEDASAQGLKKQELALIPIGVYGSDANIKSTDCAICLAQFEVGDKLRMLPICNHGF 128
            E+A    +  GLKK++L  IP+ VYG+  N  ST+C ICL  F  G+K+R+LP CNHGF
Sbjct: 166 PEQAATRLATTGLKKRDLKQIPVAVYGTGVNFPSTECPICLGDFVDGEKVRVLPKCNHGF 225

Query: 129 HLTCIDTWLLSNFSCPNCRQSV 148
           H+ CIDTWL+S+ SCPNCR S+
Sbjct: 226 HVRCIDTWLVSHSSCPNCRHSL 245

[Close]
BLAST of MELO3C009107 vs. TAIR10
Match: AT5G01880.1 (AT5G01880.1 RING/U-box superfamily protein)

HSP 1 Score: 142.9 bits (359), Expect = 1.8e-34
Identity = 70/145 (48.28%), Postives = 94/145 (64.83%), Query Frame = 1 

Query: 14  GNRTSN---WSNYVGEINFDVHMTLTLAALLCLLIGAVGVNSIVRCFLRCRYSFETERAE 73
           GN TS       Y  ++NFD +M + LAALLC LI A+G+NSI+RC +RC +   +  A 
Sbjct: 12  GNETSGSGGGDGYTRDMNFDANMVIILAALLCALILALGLNSILRCAMRCGFGLSSSAAA 71

Query: 74  ED-ASAQGLKKQELALIPIGVYGS-DANIKSTDCAICLAQFEVGDKLRMLPICNHGFHLT 133
              A   GLKK+EL   P+  YGS +  I +T+CAICL +F  G+++R+LP CNH FH++
Sbjct: 72  GTVADRAGLKKRELKKFPVAEYGSGEVKIAATECAICLGEFADGERVRVLPPCNHSFHMS 131

Query: 134 CIDTWLLSNFSCPNCRQSVKPPHTS 154
           CIDTWL+S+ SCPNCR S+   H +
Sbjct: 132 CIDTWLVSHSSCPNCRHSLIEVHVA 156

[Close]
BLAST of MELO3C009107 vs. TAIR10
Match: AT3G10910.1 (AT3G10910.1 RING/U-box superfamily protein)

HSP 1 Score: 137.9 bits (346), Expect = 5.7e-33
Identity = 77/167 (46.11%), Postives = 98/167 (58.68%), Query Frame = 1 

Query: 7   RGLTEAQGNRTSNWS----NYVGEINFDVHMTLTLAALLCLLIGAVGVNSIVRCFLRCRY 66
           R L E Q N  +N +      + +  FD +M + LAALLC LI A+ +NS +RC LR   
Sbjct: 3   RLLLEPQANAPANANPKPKGGINDTYFDTNMVIILAALLCALICALSLNSALRCVLRITR 62

Query: 67  SFETERAEEDAS-----------AQGLKKQELALIPIGVYGSDA-NIKSTDCAICLAQFE 126
            F ++    +AS           A GLKKQ L  IP+G+YGS   ++K+T+C ICL  FE
Sbjct: 63  RFTSDDQVSNASNANANLGRLAAATGLKKQALKQIPVGLYGSGIIDMKATECLICLGDFE 122

Query: 127 VGDKLRMLPICNHGFHLTCIDTWLLSNFSCPNCRQSVKPPHTSPHIV 158
            G+K+R+LP CNHGFH+ CIDTWLLS  SCP CRQS+     SP  V
Sbjct: 123 DGEKVRVLPKCNHGFHVRCIDTWLLSRSSCPTCRQSLLLEQPSPMAV 169

[Close]
BLAST of MELO3C009107 vs. TAIR10
Match: AT5G05280.1 (AT5G05280.1 RING/U-box superfamily protein)

HSP 1 Score: 137.5 bits (345), Expect = 7.4e-33
Identity = 66/137 (48.18%), Postives = 87/137 (63.50%), Query Frame = 1 

Query: 14  GNRTSNWSNYVGEINFDVHMTLTLAALLCLLIGAVGVNSIVRCFLRCRYSFETERAEEDA 73
           G+  SN  N     + D HM + LAALLC LI A+G+NS++RC LRC   F       D 
Sbjct: 25  GDSVSNNKNIA---SMDTHMVIILAALLCALICALGINSVLRCVLRCTRRFTPNEDPVDT 84

Query: 74  S---AQGLKKQELALIPIGVYGSDANIKSTDCAICLAQFEVGDKLRMLPICNHGFHLTCI 133
           +   A+G+KK+ L +IP+  Y  +  +K+T+C ICL  F  G+ +R+LP CNHGFH+ CI
Sbjct: 85  NANVAKGIKKRALKVIPVDSYSPELKMKATECLICLGDFVEGETVRVLPKCNHGFHVKCI 144

Query: 134 DTWLLSNFSCPNCRQSV 148
           DTWLLS+ SCP CRQS+
Sbjct: 145 DTWLLSHSSCPTCRQSL 158

[Close]
BLAST of MELO3C009107 vs. TAIR10
Match: AT1G49230.1 (AT1G49230.1 RING/U-box superfamily protein)

HSP 1 Score: 112.8 bits (281), Expect = 2.0e-25
Identity = 52/130 (40.00%), Postives = 81/130 (62.31%), Query Frame = 1 

Query: 21  SNYVGEINFDVHMTLTLAALLCLLIGAVGVNSIVRCFLRCRYSFETERAEEDASAQ---- 80
           S YVG+ NFD ++ + L+ LLC L+ ++G+NSI+RC LRC     +E   ++   +    
Sbjct: 44  SPYVGDNNFDANVVMVLSVLLCALVCSLGLNSIIRCALRCSNLVPSEAGGDNYPVRLTNT 103

Query: 81  GLKKQELALIPIGVYGSDANIKS--TDCAICLAQFEVGDKLRMLPICNHGFHLTCIDTWL 140
           G+K++ L       Y ++ N+    T+CAICL++F   +++++LP C+HGFH+ CID WL
Sbjct: 104 GVKRKALKSFQTVSYSTELNLPGLDTECAICLSEFVAEERVKLLPTCHHGFHVRCIDKWL 163

Query: 141 LSNFSCPNCR 145
            S+ SCP CR
Sbjct: 164 SSHSSCPTCR 173

[Close]
BLAST of MELO3C009107 vs. TAIR10
Match: AT1G76410.1 (AT1G76410.1 RING/U-box superfamily protein)

HSP 1 Score: 99.0 bits (245), Expect = 2.9e-21
Identity = 54/124 (43.55%), Postives = 72/124 (58.06%), Query Frame = 1 

Query: 29  FDVHMTLTLAALLCLLIGAVGVNSIVRCFLRCRY-----SFETERAEEDASAQGLKKQEL 88
           F+  + L LA LLC L   +G+ ++ RC    R      S +T      A+ +GLKK+ L
Sbjct: 24  FNSDLVLILAVLLCALTCIIGLIAVSRCAWLRRIASRNRSDQTHPPPVAAANKGLKKKVL 83

Query: 89  ALIPIGVYGSDANI--KSTDCAICLAQFEVGDKLRMLPICNHGFHLTCIDTWLLSNFSCP 146
             +P   Y  D+    K  +CAICL +F  GD+LR+LP C HGFH++CIDTWL S+ SCP
Sbjct: 84  RSLPKLTYSPDSPPAEKLVECAICLTEFAAGDELRVLPQCGHGFHVSCIDTWLGSHSSCP 143

[Close]
BLAST of MELO3C009107 vs. NCBI nr
Match: gi|659085724|ref|XP_008443568.1| (PREDICTED: RING-H2 finger protein ATL74-like [Cucumis melo])

HSP 1 Score: 340.1 bits (871), Expect = 2.1e-90
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 1 

Query: 1   MDQKLRRGLTEAQGNRTSNWSNYVGEINFDVHMTLTLAALLCLLIGAVGVNSIVRCFLRC 60
           MDQKLRRGLTEAQGNRTSNWSNYVGEINFDVHMTLTLAALLCLLIGAVGVNSIVRCFLRC
Sbjct: 1   MDQKLRRGLTEAQGNRTSNWSNYVGEINFDVHMTLTLAALLCLLIGAVGVNSIVRCFLRC 60

Query: 61  RYSFETERAEEDASAQGLKKQELALIPIGVYGSDANIKSTDCAICLAQFEVGDKLRMLPI 120
           RYSFETERAEEDASAQGLKKQELALIPIGVYGSDANIKSTDCAICLAQFEVGDKLRMLPI
Sbjct: 61  RYSFETERAEEDASAQGLKKQELALIPIGVYGSDANIKSTDCAICLAQFEVGDKLRMLPI 120

Query: 121 CNHGFHLTCIDTWLLSNFSCPNCRQSVKPPHTSPHIVVIIDSVN 165
           CNHGFHLTCIDTWLLSNFSCPNCRQSVKPPHTSPHIVVIIDSVN
Sbjct: 121 CNHGFHLTCIDTWLLSNFSCPNCRQSVKPPHTSPHIVVIIDSVN 164

[Close]
BLAST of MELO3C009107 vs. NCBI nr
Match: gi|700203562|gb|KGN58695.1| (hypothetical protein Csa_3G728120 [Cucumis sativus])

HSP 1 Score: 180.6 bits (457), Expect = 2.2e-42
Identity = 86/106 (81.13%), Postives = 95/106 (89.62%), Query Frame = 1 

Query: 27  INFDVHMTLTLAALLCLLIGAVGVNSIVRCFLRCRYSFETERAEEDASAQGLKKQELALI 86
           +NFDVHM + LAALLC LIGAVGVNSI+RC LRCRYSFE ERA+E A   GLKK+E+ALI
Sbjct: 1   MNFDVHMGVILAALLCALIGAVGVNSILRCVLRCRYSFELERAQEGAGTPGLKKREIALI 60

Query: 87  PIGVYGSDANIKSTDCAICLAQFEVGDKLRMLPICNHGFHLTCIDT 133
            I VYG+DANIK+TDCAICLAQF+VGDKLRMLPICNHGFHLTCIDT
Sbjct: 61  SIKVYGTDANIKNTDCAICLAQFKVGDKLRMLPICNHGFHLTCIDT 106

[Close]
BLAST of MELO3C009107 vs. NCBI nr
Match: gi|1009158768|ref|XP_015897459.1| (PREDICTED: RING-H2 finger protein ATL74-like [Ziziphus jujuba])

HSP 1 Score: 166.8 bits (421), Expect = 3.2e-38
Identity = 84/144 (58.33%), Postives = 103/144 (71.53%), Query Frame = 1 

Query: 14  GNRTSNWSNYVGEINFDVHMTLTLAALLCLLIGAVGVNSIVRCFLRCRYSFETERAEEDA 73
           GNRT +  +Y+GE NFD +M + LAALLC LI A+G+NSIVRC LRC   F TE  E+ A
Sbjct: 23  GNRTRD--SYIGETNFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFATETPEQAA 82

Query: 74  S---AQGLKKQELALIPIGVYGSDA-NIKSTDCAICLAQFEVGDKLRMLPICNHGFHLTC 133
           +   A GLKK  L  IP+ VYGS   NI + +C ICL +FE GDK+R+LP CNHGFH++C
Sbjct: 83  ARLAATGLKKSHLRQIPVAVYGSSGVNIPAMECPICLGEFEDGDKVRVLPKCNHGFHVSC 142

Query: 134 IDTWLLSNFSCPNCRQSVKPPHTS 154
           IDTWLLS+ SCPNCR S+   H S
Sbjct: 143 IDTWLLSHSSCPNCRHSLLQQHPS 164

[Close]
BLAST of MELO3C009107 vs. NCBI nr
Match: gi|566210246|ref|XP_002323073.2| (zinc finger family protein [Populus trichocarpa])

HSP 1 Score: 166.4 bits (420), Expect = 4.2e-38
Identity = 79/139 (56.83%), Postives = 102/139 (73.38%), Query Frame = 1 

Query: 12  AQGNRTSNWSNYVGEINFDVHMTLTLAALLCLLIGAVGVNSIVRCFLRCRYSFETERAEE 71
           A GNRT +  +Y+ E NFD +M + LAALLC LIGA+G+NSIVRC LRC   F  E  EE
Sbjct: 19  ANGNRTHD--SYINETNFDTNMVIILAALLCALIGALGLNSIVRCLLRCSSRFALETTEE 78

Query: 72  DAS---AQGLKKQELALIPIGVYGSDANIKSTDCAICLAQFEVGDKLRMLPICNHGFHLT 131
            A+   A GLKK++L  IP+ +YG+  +I +T+C ICL +F  G+K+R+LP CNHGFH+ 
Sbjct: 79  AAARLAATGLKKRDLRQIPVAIYGAGGSISATECPICLGEFVDGEKVRVLPKCNHGFHVR 138

Query: 132 CIDTWLLSNFSCPNCRQSV 148
           CIDTWLLS+ SCPNCR S+
Sbjct: 139 CIDTWLLSHSSCPNCRHSL 155

[Close]
BLAST of MELO3C009107 vs. NCBI nr
Match: gi|694393126|ref|XP_009372015.1| (PREDICTED: RING-H2 finger protein ATL74-like [Pyrus x bretschneideri])

HSP 1 Score: 165.6 bits (418), Expect = 7.2e-38
Identity = 81/146 (55.48%), Postives = 102/146 (69.86%), Query Frame = 1 

Query: 5   LRRGLTEAQGNRTSNWSNYVGEINFDVHMTLTLAALLCLLIGAVGVNSIVRCFLRCRYSF 64
           L      + GNRT++  +Y+ E NFD +M + LAALLC LI A+G+NSIVRC LRC + F
Sbjct: 10  LNAAARSSNGNRTAD--SYINEANFDTNMVIILAALLCALICALGLNSIVRCALRCSHRF 69

Query: 65  ETERAEEDAS---AQGLKKQELALIPIGVYGSDANIKSTDCAICLAQFEVGDKLRMLPIC 124
             E  E+ A+   A GLKK  L  IPI VYGS  NI +T+C ICL +FE G+K+R+LP C
Sbjct: 70  ALETPEQAAARLAATGLKKSHLRQIPIAVYGSGVNIPATECPICLTEFEDGEKVRVLPKC 129

Query: 125 NHGFHLTCIDTWLLSNFSCPNCRQSV 148
           NHGFH+ CIDTW LS+ SCPNCR S+
Sbjct: 130 NHGFHVRCIDTWFLSHSSCPNCRHSL 153

The following BLAST results are available for this feature:
BLAST of MELO3C009107 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ATL74_ARATH3.1e-3348.28RING-H2 finger protein ATL74 OS=Arabidopsis thaliana GN=ATL74 PE=2 SV=1[more]
ATL72_ARATH1.0e-3146.11RING-H2 finger protein ATL72 OS=Arabidopsis thaliana GN=ATL72 PE=2 SV=1[more]
ATL73_ARATH1.3e-3148.18RING-H2 finger protein ATL73 OS=Arabidopsis thaliana GN=ATL73 PE=2 SV=1[more]
ATL78_ARATH3.5e-2440.00RING-H2 finger protein ATL78 OS=Arabidopsis thaliana GN=ATL78 PE=2 SV=1[more]
ATL8_ARATH5.2e-2043.55RING-H2 finger protein ATL8 OS=Arabidopsis thaliana GN=ATL8 PE=2 SV=2[more]
BLAST of MELO3C009107 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L9Q6_CUCSA1.5e-4281.13Uncharacterized protein OS=Cucumis sativus GN=Csa_3G728120 PE=4 SV=1[more]
B9IGS7_POPTR2.9e-3856.83Zinc finger family protein OS=Populus trichocarpa GN=POPTR_0016s14320g PE=4 SV=2[more]
A5BMU1_VITVI2.8e-3654.79Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0067g02880 PE=4 SV=... [more]
A0A067JGG0_JATCU2.8e-3657.66Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00660 PE=4 SV=1[more]
A0A061EHG8_THECC6.2e-3654.93RING/U-box superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_019707 PE=4 S... [more]
BLAST of MELO3C009107 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G01880.11.8e-3448.28 RING/U-box superfamily protein[more]
AT3G10910.15.7e-3346.11 RING/U-box superfamily protein[more]
AT5G05280.17.4e-3348.18 RING/U-box superfamily protein[more]
AT1G49230.12.0e-2540.00 RING/U-box superfamily protein[more]
AT1G76410.12.9e-2143.55 RING/U-box superfamily protein[more]
BLAST of MELO3C009107 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659085724|ref|XP_008443568.1|2.1e-90100.00PREDICTED: RING-H2 finger protein ATL74-like [Cucumis melo][more]
gi|700203562|gb|KGN58695.1|2.2e-4281.13hypothetical protein Csa_3G728120 [Cucumis sativus][more]
gi|1009158768|ref|XP_015897459.1|3.2e-3858.33PREDICTED: RING-H2 finger protein ATL74-like [Ziziphus jujuba][more]
gi|566210246|ref|XP_002323073.2|4.2e-3856.83zinc finger family protein [Populus trichocarpa][more]
gi|694393126|ref|XP_009372015.1|7.2e-3855.48PREDICTED: RING-H2 finger protein ATL74-like [Pyrus x bretschneideri][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0044267 cellular protein metabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016020 membrane
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C009107T1MELO3C009107T1mRNA


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 101..144
score: 4.6
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 102..143
score: 1.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 102..144
score: 1
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 99..147
score: 4.9
NoneNo IPR availablePANTHERPTHR14155RING FINGER DOMAIN-CONTAININGcoord: 37..155
score: 5.0
NoneNo IPR availablePANTHERPTHR14155:SF74RING-H2 FINGER PROTEIN ATL45-RELATEDcoord: 37..155
score: 5.0
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 101..150
score: 5.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C009107Csa3G728120Cucumber (Chinese Long) v2cumeB224
MELO3C009107Cla018046Watermelon (97103) v1mewmB346
MELO3C009107ClCG10G022690Watermelon (Charleston Gray)mewcgB315
MELO3C009107Cla97C10G206100Watermelon (97103) v2mewmbB316
MELO3C009107Bhi11G001453Wax gourdmewgoB379
MELO3C009107CSPI04G16550Wild cucumber (PI 183967)cpimeB287
MELO3C009107CSPI03G30670Wild cucumber (PI 183967)cpimeB216
MELO3C009107Cucsa.130520Cucumber (Gy14) v1cgymeB209
MELO3C009107Cucsa.176980Cucumber (Gy14) v1cgymeB315
MELO3C009107Lsi03G022760Bottle gourd (USVL1VR-Ls)lsimeB260
MELO3C009107Cp4.1LG08g12450Cucurbita pepo (Zucchini)cpemeB796
MELO3C009107CsGy4G015870Cucumber (Gy14) v2cgybmeB248
MELO3C009107Carg01139Silver-seed gourdcarmeB0161
MELO3C009107CsaV3_3G033140Cucumber (Chinese Long) v3cucmeB218
MELO3C009107CsaV3_4G027170Cucumber (Chinese Long) v3cucmeB292
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
MELO3C009107MELO3C025221Melon (DHL92) v3.5.1memeB146
The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C009107Cucurbita maxima (Rimu)cmameB229
MELO3C009107Cucurbita maxima (Rimu)cmameB604
MELO3C009107Cucurbita maxima (Rimu)cmameB755
MELO3C009107Cucurbita maxima (Rimu)cmameB792
MELO3C009107Cucurbita moschata (Rifu)cmomeB215
MELO3C009107Cucurbita moschata (Rifu)cmomeB412
MELO3C009107Cucurbita moschata (Rifu)cmomeB593
MELO3C009107Cucurbita moschata (Rifu)cmomeB747
MELO3C009107Cucumber (Chinese Long) v2cumeB294
MELO3C009107Watermelon (Charleston Gray)mewcgB330
MELO3C009107Watermelon (97103) v1mewmB379
MELO3C009107Cucurbita pepo (Zucchini)cpemeB053
MELO3C009107Cucurbita pepo (Zucchini)cpemeB441
MELO3C009107Cucurbita pepo (Zucchini)cpemeB571
MELO3C009107Bottle gourd (USVL1VR-Ls)lsimeB141
MELO3C009107Cucumber (Gy14) v2cgybmeB184
MELO3C009107Silver-seed gourdcarmeB0282
MELO3C009107Silver-seed gourdcarmeB0973
MELO3C009107Watermelon (97103) v2mewmbB330
MELO3C009107Wax gourdmewgoB420