MELO3C008731.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C008731.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	Photosystem I reaction center subunit XI
Location	chr05 : 18098229 .. 18099843 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGAAGCGAAAGGTTTGATCAACCACAGCCTCCCACGAATTTCCATGGCCAGTGACAACCAACAACAAGAACTTAAACTAACCTCCAAAACCAAATCTAAAAATCTCACCTCATTCTTCTTCTCTGCCACTGATCCTTCCACAAGCCAAAGGCAGCAGAAGCAAAAGCAGCAGCCATGGCCACTGCAACCTCTCCCATTGCCAGCCAGCTCAGTTCCAGCTTCGCTTCATCTAACACCAGAGCTTTGATCTCTCCTAAAGGCCTATCCGCTTCGCCCCTCCGACGCATCCCTACAAGAACACACTCCTTCACCATCAGAGCCATCCAAGCTGATAAGGTAATATAAACAATCCCATTTCTCAATCTTACATCATCTGCTTCTCTTTGGAGCTTTCAAGATATATATATATTATATGCCATGTAATGTATACTATTTCAAGGGATATTAACTTCAATCTCAACGAGTCAGAGTAATATAAACGTATTAGTTGAATAAAATTTTAAAGAGTATGTTTGAGAGTGCTTTTAATGTAAGTGTGTGTGACTTACGAGGAGAGTTAACCAGAAAAAAATCTTTAAAAATTTATGTAAAGATATTAAGATGAAGAGAGTGAACATAAGTATAGCTCAAAGATAATTAGCATGTACACCTTCCATCTTGGAGGATCACAAATGAGAAGAAGCCGGTAACGGTTAGGTAGAGAAAAGATCCGTTAGTGAAAGAAAAATTAATGCAGAAAATGCATGTGAAGATAGTACTTAGAAAAAGAAAAAGGTATTCAAAGTGGATAAAAAAAAAAAAACATGCAATGCAAAGATGTTAATGGGGTATTGAAACTGTTGCAGCCAACTTACCAAGTGATCCAGCCAATCAATGGAGACCCATTCATTGGAAGCCTTGAGACTCCAGTAACCTCAAGCCCACTGATAGCATGGTACCTTTCAAACCTCCCAGCCTACAGAACAGCAGTCAGTCCATTGCTGAGGGGAATTGAAGTGGGCCTGGCTCACGGTTTCTTTCTGGTTGGTCCATTTGTCAAAGCTGGCCCTCTAAGGAACACAGCCTACGCCGGAGGAGCAGGCTCACTGGCTGCCGGTGGTCTCATTGTCATTTTGAGCATCTGCTTGACAATGTATGGTGTTGCATCATTCAATGAAGGAGAGCCATCTACCGCACCATCATTGACTTTGACTGGCAGGAAGAAGACCCCTGATCCTCTGCAAACAGCCGATGGGTGGGCAAAATTCTCAGGCGGGTTCTTCTTCGGCGGTATCTCCGGTGTGATCTGGGCATACTTCCTCCTCTATGTCTTGGACCTCCCTTACTACGTCAAGTAGATTTTGTATCATTTTCTGTTTCTACAATGCAACTTCCATGTCTGTGTTATGGAAACATAAAATTGTATATTTTCTGCCAAACCTCTTGTTAGATCCTTTGTGATTGCATATCGATTTCCTTTTTGGAACTGTTATGTATGTACCCTACTTCCATTTGCTTCTTCACAAACAATAGCTTCTGTGCCACTGCATTAAAAATTGGTAGGAGAAGAATATCAACGATATGATGTACTTTTTCCTTTTTTGTCATAAGTAACATACCTACTTTATCTGGGAA

mRNA sequence

GAGAAGCGAAAGGTTTGATCAACCACAGCCTCCCACGAATTTCCATGGCCAGTGACAACCAACAACAAGAACTTAAACTAACCTCCAAAACCAAATCTAAAAATCTCACCTCATTCTTCTTCTCTGCCACTGATCCTTCCACAAGCCAAAGGCAGCAGAAGCAAAAGCAGCAGCCATGGCCACTGCAACCTCTCCCATTGCCAGCCAGCTCAGTTCCAGCTTCGCTTCATCTAACACCAGAGCTTTGATCTCTCCTAAAGGCCTATCCGCTTCGCCCCTCCGACGCATCCCTACAAGAACACACTCCTTCACCATCAGAGCCATCCAAGCTGATAAGCCAACTTACCAAGTGATCCAGCCAATCAATGGAGACCCATTCATTGGAAGCCTTGAGACTCCAGTAACCTCAAGCCCACTGATAGCATGGTACCTTTCAAACCTCCCAGCCTACAGAACAGCAGTCAGTCCATTGCTGAGGGGAATTGAAGTGGGCCTGGCTCACGGTTTCTTTCTGGTTGGTCCATTTGTCAAAGCTGGCCCTCTAAGGAACACAGCCTACGCCGGAGGAGCAGGCTCACTGGCTGCCGGTGGTCTCATTGTCATTTTGAGCATCTGCTTGACAATGTATGGTGTTGCATCATTCAATGAAGGAGAGCCATCTACCGCACCATCATTGACTTTGACTGGCAGGAAGAAGACCCCTGATCCTCTGCAAACAGCCGATGGGTGGGCAAAATTCTCAGGCGGGTTCTTCTTCGGCGGTATCTCCGGTGTGATCTGGGCATACTTCCTCCTCTATGTCTTGGACCTCCCTTACTACGTCAAGTAGATTTTGTATCATTTTCTGTTTCTACAATGCAACTTCCATGTCTGTGTTATGGAAACATAAAATTGTATATTTTCTGCCAAACCTCTTGTTAGATCCTTTGTGATTGCATATCGATTTCCTTTTTGGAACTGTTATGTATGTACCCTACTTCCATTTGCTTCTTCACAAACAATAGCTTCTGTGCCACTGCATTAAAAATTGGTAGGAGAAGAATATCAACGATATGATGTACTTTTTCCTTTTTTGTCATAAGTAACATACCTACTTTATCTGGGAA

Coding sequence (CDS)

ATGGCCACTGCAACCTCTCCCATTGCCAGCCAGCTCAGTTCCAGCTTCGCTTCATCTAACACCAGAGCTTTGATCTCTCCTAAAGGCCTATCCGCTTCGCCCCTCCGACGCATCCCTACAAGAACACACTCCTTCACCATCAGAGCCATCCAAGCTGATAAGCCAACTTACCAAGTGATCCAGCCAATCAATGGAGACCCATTCATTGGAAGCCTTGAGACTCCAGTAACCTCAAGCCCACTGATAGCATGGTACCTTTCAAACCTCCCAGCCTACAGAACAGCAGTCAGTCCATTGCTGAGGGGAATTGAAGTGGGCCTGGCTCACGGTTTCTTTCTGGTTGGTCCATTTGTCAAAGCTGGCCCTCTAAGGAACACAGCCTACGCCGGAGGAGCAGGCTCACTGGCTGCCGGTGGTCTCATTGTCATTTTGAGCATCTGCTTGACAATGTATGGTGTTGCATCATTCAATGAAGGAGAGCCATCTACCGCACCATCATTGACTTTGACTGGCAGGAAGAAGACCCCTGATCCTCTGCAAACAGCCGATGGGTGGGCAAAATTCTCAGGCGGGTTCTTCTTCGGCGGTATCTCCGGTGTGATCTGGGCATACTTCCTCCTCTATGTCTTGGACCTCCCTTACTACGTCAAGTAG

Protein sequence

MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPTYQVIQPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKAGPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPLQTADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK

Homology

[Close]

BLAST of MELO3C008731.2 vs. NCBI nr
Match: XP_008441854.1 (PREDICTED: photosystem I reaction center subunit XI, chloroplastic [Cucumis melo])

HSP 1 Score: 424.1 bits (1089), Expect = 2.9e-115
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPTYQVI 60
           MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPTYQVI
Sbjct: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPTYQVI 60

Query: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120
           QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA
Sbjct: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120

Query: 121 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPLQ 180
           GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPLQ
Sbjct: 121 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPLQ 180

Query: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 218
           TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK
Sbjct: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 217

[Close]

BLAST of MELO3C008731.2 vs. NCBI nr
Match: NP_001267647.1 (photosystem I reaction center subunit XI, chloroplastic [Cucumis sativus] >BAA11677.1 subunit of photosystem I [Cucumis sativus] >KGN61263.1 Photosystem I reaction center subunit XI [Cucumis sativus])

HSP 1 Score: 422.2 bits (1084), Expect = 1.1e-114
Identity = 215/217 (99.08%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPTYQVI 60
           MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPT+QVI
Sbjct: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPTFQVI 60

Query: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120
           QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA
Sbjct: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120

Query: 121 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPLQ 180
           GPLRNTAYAGGAGSLAAGGLIVILS+CLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPLQ
Sbjct: 121 GPLRNTAYAGGAGSLAAGGLIVILSVCLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPLQ 180

Query: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 218
           TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK
Sbjct: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 217

[Close]

BLAST of MELO3C008731.2 vs. NCBI nr
Match: Q39654.1 (RecName: Full=Photosystem I reaction center subunit XI, chloroplastic; Short=PSI-L; AltName: Full=PSI subunit V; Flags: Precursor >BAA09047.1 PsaL [Cucumis sativus])

HSP 1 Score: 420.2 bits (1079), Expect = 4.2e-114
Identity = 214/217 (98.62%), Postives = 216/217 (99.54%), Query Frame = 0


Query: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPTYQVI 60
           MATATSP ASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPT+QVI
Sbjct: 1   MATATSPTASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPTFQVI 60

Query: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120
           QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA
Sbjct: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120

Query: 121 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPLQ 180
           GPLRNTAYAGGAGSLAAGGLIVILS+CLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPLQ
Sbjct: 121 GPLRNTAYAGGAGSLAAGGLIVILSVCLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPLQ 180

Query: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 218
           TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK
Sbjct: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 217

[Close]

BLAST of MELO3C008731.2 vs. NCBI nr
Match: XP_022149833.1 (photosystem I reaction center subunit XI, chloroplastic [Momordica charantia])

HSP 1 Score: 415.2 bits (1066), Expect = 1.3e-112
Identity = 212/217 (97.70%), Postives = 214/217 (98.62%), Query Frame = 0


Query: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPTYQVI 60
           MATATSPIASQLSSSFASSNTRALISPKGLSASPLRR+P RTHSFTIRAIQADKPTYQVI
Sbjct: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRVPARTHSFTIRAIQADKPTYQVI 60

Query: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120
           QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA
Sbjct: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120

Query: 121 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPLQ 180
           GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKK PD LQ
Sbjct: 121 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKAPDQLQ 180

Query: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 218
           TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPY+VK
Sbjct: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK 217

[Close]

BLAST of MELO3C008731.2 vs. NCBI nr
Match: XP_022965497.1 (photosystem I reaction center subunit XI, chloroplastic [Cucurbita maxima])

HSP 1 Score: 413.3 bits (1061), Expect = 5.1e-112
Identity = 210/217 (96.77%), Postives = 214/217 (98.62%), Query Frame = 0


Query: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPTYQVI 60
           MATATSPIASQLSS+F SSNTRALI+PKGLSASPLRR+P RTHSFTIRAIQADKPTYQVI
Sbjct: 1   MATATSPIASQLSSAFTSSNTRALIAPKGLSASPLRRVPARTHSFTIRAIQADKPTYQVI 60

Query: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120
           QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA
Sbjct: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120

Query: 121 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPLQ 180
           GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPD LQ
Sbjct: 121 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPDQLQ 180

Query: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 218
           TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPY+VK
Sbjct: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK 217

[Close]

BLAST of MELO3C008731.2 vs. TAIR10
Match: AT4G12800.1 (photosystem I subunit l)

HSP 1 Score: 339.3 bits (869), Expect = 1.7e-93
Identity = 171/219 (78.08%), Postives = 195/219 (89.04%), Query Frame = 0


Query: 1   MATATSPIASQLSSSFASSN-TRALISPKGLSASPLRRIPT-RTHSFTIRAIQADKPTYQ 60
           MA + SP+ASQL SSF+S++ ++ L  PKG+S +P    PT R  SFT+RA+++DK T+Q
Sbjct: 1   MAASASPMASQLRSSFSSASLSQRLAVPKGISGAPFGVSPTKRVSSFTVRAVKSDKTTFQ 60

Query: 61  VIQPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFV 120
           V+QPINGDPFIGSLETPVTSSPLIAWYLSNLP YRTAV+PLLRG+EVGLAHGFFLVGPFV
Sbjct: 61  VVQPINGDPFIGSLETPVTSSPLIAWYLSNLPGYRTAVNPLLRGVEVGLAHGFFLVGPFV 120

Query: 121 KAGPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPDP 180
           KAGPLRNTAYAG AGSLAA GL+VILS+CLT+YG++SF EGEPS APSLTLTGRKK PD 
Sbjct: 121 KAGPLRNTAYAGSAGSLAAAGLVVILSMCLTIYGISSFKEGEPSIAPSLTLTGRKKQPDQ 180

Query: 181 LQTADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 218
           LQTADGWAKF+GGFFFGGISGV WAYFLLYVLDLPY+VK
Sbjct: 181 LQTADGWAKFTGGFFFGGISGVTWAYFLLYVLDLPYFVK 219

[Close]

BLAST of MELO3C008731.2 vs. Swiss-Prot
Match: sp|Q39654|PSAL_CUCSA (Photosystem I reaction center subunit XI, chloroplastic OS=Cucumis sativus OX=3659 GN=PSAL PE=2 SV=1)

HSP 1 Score: 420.2 bits (1079), Expect = 1.4e-116
Identity = 214/217 (98.62%), Postives = 216/217 (99.54%), Query Frame = 0


Query: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPTYQVI 60
           MATATSP ASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPT+QVI
Sbjct: 1   MATATSPTASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPTFQVI 60

Query: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120
           QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA
Sbjct: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120

Query: 121 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPLQ 180
           GPLRNTAYAGGAGSLAAGGLIVILS+CLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPLQ
Sbjct: 121 GPLRNTAYAGGAGSLAAGGLIVILSVCLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPLQ 180

Query: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 218
           TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK
Sbjct: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 217

[Close]

BLAST of MELO3C008731.2 vs. Swiss-Prot
Match: sp|Q9SUI4|PSAL_ARATH (Photosystem I reaction center subunit XI, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSAL PE=1 SV=2)

HSP 1 Score: 339.3 bits (869), Expect = 3.1e-92
Identity = 171/219 (78.08%), Postives = 195/219 (89.04%), Query Frame = 0


Query: 1   MATATSPIASQLSSSFASSN-TRALISPKGLSASPLRRIPT-RTHSFTIRAIQADKPTYQ 60
           MA + SP+ASQL SSF+S++ ++ L  PKG+S +P    PT R  SFT+RA+++DK T+Q
Sbjct: 1   MAASASPMASQLRSSFSSASLSQRLAVPKGISGAPFGVSPTKRVSSFTVRAVKSDKTTFQ 60

Query: 61  VIQPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFV 120
           V+QPINGDPFIGSLETPVTSSPLIAWYLSNLP YRTAV+PLLRG+EVGLAHGFFLVGPFV
Sbjct: 61  VVQPINGDPFIGSLETPVTSSPLIAWYLSNLPGYRTAVNPLLRGVEVGLAHGFFLVGPFV 120

Query: 121 KAGPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPDP 180
           KAGPLRNTAYAG AGSLAA GL+VILS+CLT+YG++SF EGEPS APSLTLTGRKK PD 
Sbjct: 121 KAGPLRNTAYAGSAGSLAAAGLVVILSMCLTIYGISSFKEGEPSIAPSLTLTGRKKQPDQ 180

Query: 181 LQTADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 218
           LQTADGWAKF+GGFFFGGISGV WAYFLLYVLDLPY+VK
Sbjct: 181 LQTADGWAKFTGGFFFGGISGVTWAYFLLYVLDLPYFVK 219

[Close]

BLAST of MELO3C008731.2 vs. Swiss-Prot
Match: sp|Q41385|PSAL_SPIOL (Photosystem I reaction center subunit XI, chloroplastic OS=Spinacia oleracea OX=3562 GN=PSAL PE=1 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 9.8e-91
Identity = 169/219 (77.17%), Postives = 188/219 (85.84%), Query Frame = 0


Query: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPT--RTHSFTIRAIQADKPTYQ 60
           MA  TSP+ASQL S F    T+AL+ PKG+S   LR  P+  R  SFT+RAI+ +KPTYQ
Sbjct: 1   MAATTSPMASQLKSGF---TTKALVVPKGISGPALRGFPSPRRHTSFTVRAIKTEKPTYQ 60

Query: 61  VIQPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFV 120
           VIQP+NGDPFIG LETPVTSSPLIAWYLSNLPAYRTAV+PLLRG+EVGLAHGF LVGPFV
Sbjct: 61  VIQPLNGDPFIGGLETPVTSSPLIAWYLSNLPAYRTAVNPLLRGVEVGLAHGFLLVGPFV 120

Query: 121 KAGPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPDP 180
           KAGPLRNT YAG AGSLAA GL+VILS+CLTMYG+ASF EGEPS AP+LTLTGRKK PD 
Sbjct: 121 KAGPLRNTEYAGAAGSLAAAGLVVILSMCLTMYGIASFKEGEPSIAPALTLTGRKKQPDQ 180

Query: 181 LQTADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 218
           LQ+ADGWAKF+GGFFFGG+SGV WA FL+YVLDLPYY K
Sbjct: 181 LQSADGWAKFTGGFFFGGVSGVTWACFLMYVLDLPYYFK 216

[Close]

BLAST of MELO3C008731.2 vs. Swiss-Prot
Match: sp|P23993|PSAL_HORVU (Photosystem I reaction center subunit XI, chloroplastic OS=Hordeum vulgare OX=4513 GN=PSAL PE=1 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 3.0e-79
Identity = 153/218 (70.18%), Postives = 176/218 (80.73%), Query Frame = 0


Query: 1   MATA-TSPIASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPTYQV 60
           MATA   P+ASQ+  S       A   P+G+S + L R P     F ++A+++DKPTYQV
Sbjct: 1   MATAYAPPMASQVMKS-----GLACSKPRGMSGASLTRRP----RFVVKAVKSDKPTYQV 60

Query: 61  IQPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVK 120
           +QPINGDPFIGSLETPVTSSPL+AWYLSNLPAYRTAVSPLLRGIEVGLAHG+ LVGPF  
Sbjct: 61  VQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFAL 120

Query: 121 AGPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPL 180
            GPLRNT   G AG+L A GL+ ILS+CLTMYGVASFNEGEPSTAP LTLTGRKK  D L
Sbjct: 121 TGPLRNTPVHGQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKL 180

Query: 181 QTADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 218
           QTA+GW++F+GGFFFGG+SG +WAYFLLYVLDLPY+ K
Sbjct: 181 QTAEGWSQFTGGFFFGGVSGAVWAYFLLYVLDLPYFFK 209

[Close]

BLAST of MELO3C008731.2 vs. Swiss-Prot
Match: sp|P51222|PSAL_PORPU (Photosystem I reaction center subunit XI OS=Porphyra purpurea OX=2787 GN=psaL PE=3 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 5.0e-34
Identity = 75/150 (50.00%), Postives = 98/150 (65.33%), Query Frame = 0


Query: 58  QVIQPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPF 117
           + I+P N DPF+G+L TPV++S      L NLPAYR  +SPLLRG+E+G+AHG+FL+GPF
Sbjct: 3   EFIKPYNDDPFVGNLSTPVSTSSFSKGLLGNLPAYRRGLSPLLRGLEIGMAHGYFLIGPF 62

Query: 118 VKAGPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPD 177
            K GPLR T  A  AG L++ GLI+IL+ CL+MYG  SF               R  + D
Sbjct: 63  DKLGPLRGTDVALLAGFLSSVGLIIILTTCLSMYGNVSFT--------------RSDSKD 122

Query: 178 PLQTADGWAKFSGGFFFGGISGVIWAYFLL 208
           PLQTA+GW +F+ GF  G + G  +AY LL
Sbjct: 123 PLQTAEGWGQFTAGFLVGAVGGSGFAYLLL 138

[Close]

BLAST of MELO3C008731.2 vs. TrEMBL
Match: tr|A0A1S3B555|A0A1S3B555_CUCME (photosystem I reaction center subunit XI, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103485887 PE=4 SV=1)

HSP 1 Score: 424.1 bits (1089), Expect = 1.9e-115
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPTYQVI 60
           MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPTYQVI
Sbjct: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPTYQVI 60

Query: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120
           QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA
Sbjct: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120

Query: 121 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPLQ 180
           GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPLQ
Sbjct: 121 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPLQ 180

Query: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 218
           TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK
Sbjct: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 217

[Close]

BLAST of MELO3C008731.2 vs. TrEMBL
Match: tr|A0A0A0LHJ8|A0A0A0LHJ8_CUCSA (Photosystem I reaction center subunit XI OS=Cucumis sativus OX=3659 GN=Csa_2G074240 PE=4 SV=1)

HSP 1 Score: 422.2 bits (1084), Expect = 7.2e-115
Identity = 215/217 (99.08%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPTYQVI 60
           MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPT+QVI
Sbjct: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPTFQVI 60

Query: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120
           QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA
Sbjct: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120

Query: 121 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPLQ 180
           GPLRNTAYAGGAGSLAAGGLIVILS+CLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPLQ
Sbjct: 121 GPLRNTAYAGGAGSLAAGGLIVILSVCLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPLQ 180

Query: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 218
           TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK
Sbjct: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 217

[Close]

BLAST of MELO3C008731.2 vs. TrEMBL
Match: tr|W9SVH5|W9SVH5_9ROSA (Photosystem I reaction center subunit XI OS=Morus notabilis OX=981085 GN=L484_015127 PE=4 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 2.5e-99
Identity = 188/218 (86.24%), Postives = 203/218 (93.12%), Query Frame = 0


Query: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPT-RTHSFTIRAIQADKPTYQV 60
           MATATSP+ASQL S+F S  +RAL+SPKGLSASPLR +P+ R  SFT++A+Q++KPT+QV
Sbjct: 1   MATATSPMASQLKSNFTSPLSRALLSPKGLSASPLRVLPSRRPSSFTVKAVQSEKPTFQV 60

Query: 61  IQPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVK 120
           IQPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHG+ LVGPFVK
Sbjct: 61  IQPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFVK 120

Query: 121 AGPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPL 180
           AGPLRNT YAGGAGSLAA GL+VILSICLTMYGVASFNEGEPSTAPSLTLTGRKK PD L
Sbjct: 121 AGPLRNTPYAGGAGSLAAAGLVVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKEPDQL 180

Query: 181 QTADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 218
           QTADGWAKF+GGFFFGGISGV WAYFLLYVLDLPYY K
Sbjct: 181 QTADGWAKFTGGFFFGGISGVTWAYFLLYVLDLPYYFK 218

[Close]

BLAST of MELO3C008731.2 vs. TrEMBL
Match: tr|A0A2P5C2F0|A0A2P5C2F0_9ROSA (Photosystem I PsaL, reaction centre subunit XI OS=Trema orientalis OX=63057 GN=TorRG33x02_299970 PE=4 SV=1)

HSP 1 Score: 368.6 bits (945), Expect = 9.5e-99
Identity = 186/218 (85.32%), Postives = 202/218 (92.66%), Query Frame = 0


Query: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPT-RTHSFTIRAIQADKPTYQV 60
           MATATSP+ SQL S+F S  +RAL+SPKGLSASPLR +P+ R  SFT++A+Q++KPT+QV
Sbjct: 1   MATATSPMVSQLKSNFTSPLSRALLSPKGLSASPLRLLPSRRPSSFTVKAVQSEKPTFQV 60

Query: 61  IQPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVK 120
           IQPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGF LVGPFVK
Sbjct: 61  IQPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFLLVGPFVK 120

Query: 121 AGPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPL 180
           AGPLRNT YAGGAGSLAA GL+VILSICLT YG+ASFNEGEPS+APSLTLTGRKK PD L
Sbjct: 121 AGPLRNTPYAGGAGSLAAAGLVVILSICLTQYGIASFNEGEPSSAPSLTLTGRKKEPDQL 180

Query: 181 QTADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 218
           QTADGWAKF+GGFFFGGISGVIWAYFLLYVLDLPYY K
Sbjct: 181 QTADGWAKFTGGFFFGGISGVIWAYFLLYVLDLPYYFK 218

[Close]

BLAST of MELO3C008731.2 vs. TrEMBL
Match: tr|A0A2P5CUI2|A0A2P5CUI2_PARAD (Photosystem I PsaL, reaction centre subunit XI OS=Parasponia andersonii OX=3476 GN=PanWU01x14_121740 PE=4 SV=1)

HSP 1 Score: 367.1 bits (941), Expect = 2.8e-98
Identity = 185/218 (84.86%), Postives = 202/218 (92.66%), Query Frame = 0


Query: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPT-RTHSFTIRAIQADKPTYQV 60
           MATATSP+ SQL S+F S  +RAL+SPKGLSASPLR +P+ R  SFT++A+Q++KPT+QV
Sbjct: 1   MATATSPMVSQLKSNFTSPLSRALLSPKGLSASPLRLLPSRRPSSFTVKAVQSEKPTFQV 60

Query: 61  IQPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVK 120
           IQPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGF LVGPFVK
Sbjct: 61  IQPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFLLVGPFVK 120

Query: 121 AGPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPL 180
           AGPLRNT YAGGAGSLAA GL+VILSICLT YG+ASFNEGEPS+APSLTLTGRKK PD L
Sbjct: 121 AGPLRNTPYAGGAGSLAAAGLVVILSICLTQYGIASFNEGEPSSAPSLTLTGRKKEPDQL 180

Query: 181 QTADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 218
           QTADGWAKF+GGFFFGGISGVIWA+FLLYVLDLPYY K
Sbjct: 181 QTADGWAKFTGGFFFGGISGVIWAFFLLYVLDLPYYFK 218

The following BLAST results are available for this feature:

BLAST of MELO3C008731.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008441854.1	2.9e-115	100.00	PREDICTED: photosystem I reaction center subunit XI, chloroplastic [Cucumis melo...	[more]
NP_001267647.1	1.1e-114	99.08	photosystem I reaction center subunit XI, chloroplastic [Cucumis sativus] >BAA11...	[more]
Q39654.1	4.2e-114	98.62	RecName: Full=Photosystem I reaction center subunit XI, chloroplastic; Short=PSI...	[more]
XP_022149833.1	1.3e-112	97.70	photosystem I reaction center subunit XI, chloroplastic [Momordica charantia]	[more]
XP_022965497.1	5.1e-112	96.77	photosystem I reaction center subunit XI, chloroplastic [Cucurbita maxima]	[more]

BLAST of MELO3C008731.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G12800.1	1.7e-93	78.08	photosystem I subunit l	[more]

BLAST of MELO3C008731.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q39654\|PSAL_CUCSA	1.4e-116	98.62	Photosystem I reaction center subunit XI, chloroplastic OS=Cucumis sativus OX=36...	[more]
sp\|Q9SUI4\|PSAL_ARATH	3.1e-92	78.08	Photosystem I reaction center subunit XI, chloroplastic OS=Arabidopsis thaliana ...	[more]
sp\|Q41385\|PSAL_SPIOL	9.8e-91	77.17	Photosystem I reaction center subunit XI, chloroplastic OS=Spinacia oleracea OX=...	[more]
sp\|P23993\|PSAL_HORVU	3.0e-79	70.18	Photosystem I reaction center subunit XI, chloroplastic OS=Hordeum vulgare OX=45...	[more]
sp\|P51222\|PSAL_PORPU	5.0e-34	50.00	Photosystem I reaction center subunit XI OS=Porphyra purpurea OX=2787 GN=psaL PE...	[more]

BLAST of MELO3C008731.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B555\|A0A1S3B555_CUCME	1.9e-115	100.00	photosystem I reaction center subunit XI, chloroplastic OS=Cucumis melo OX=3656 ...	[more]
tr\|A0A0A0LHJ8\|A0A0A0LHJ8_CUCSA	7.2e-115	99.08	Photosystem I reaction center subunit XI OS=Cucumis sativus OX=3659 GN=Csa_2G074...	[more]
tr\|W9SVH5\|W9SVH5_9ROSA	2.5e-99	86.24	Photosystem I reaction center subunit XI OS=Morus notabilis OX=981085 GN=L484_01...	[more]
tr\|A0A2P5C2F0\|A0A2P5C2F0_9ROSA	9.5e-99	85.32	Photosystem I PsaL, reaction centre subunit XI OS=Trema orientalis OX=63057 GN=T...	[more]
tr\|A0A2P5CUI2\|A0A2P5CUI2_PARAD	2.8e-98	84.86	Photosystem I PsaL, reaction centre subunit XI OS=Parasponia andersonii OX=3476 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0009538	photosystem I reaction center
GO:0009522	photosystem I

Vocabulary: **Biological Process**
Term	Definition
GO:0015979	photosynthesis

Vocabulary: **INTERPRO**
Term	Definition
IPR022980	PSI_suXI
IPR003757	PSI_PsaL
IPR036592	PSI_PsaL_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009538	photosystem I reaction center
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009536	plastid
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C008731.2.1	MELO3C008731.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036592	Photosystem I PsaL, reaction centre subunit XI superfamily	GENE3D	G3DSA:1.20.1240.10		coord: 54..217 e-value: 1.1E-75 score: 254.7
IPR036592	Photosystem I PsaL, reaction centre subunit XI superfamily	SUPERFAMILY	SSF81568	Photosystem I reaction center subunit XI, PsaL	coord: 60..216
IPR003757	Photosystem I PsaL, reaction centre subunit XI	PFAM	PF02605	PsaL	coord: 59..211 e-value: 7.7E-59 score: 197.6
IPR003757	Photosystem I PsaL, reaction centre subunit XI	PRODOM	PD005947		coord: 60..207 e-value: 8.0E-57 score: 557.0
None	No IPR available	PANTHER	PTHR34803:SF5	SUBFAMILY NOT NAMED	coord: 1..217
IPR022980	Photosystem I, reaction centre subunit XI	PANTHER	PTHR34803	FAMILY NOT NAMED	coord: 1..217

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C008731.2	Csa2G074240	Cucumber (Chinese Long) v2	cumedB132
MELO3C008731.2	CSPI02G07220	Wild cucumber (PI 183967)	cpimedB132
MELO3C008731.2	Cucsa.178540	Cucumber (Gy14) v1	cgymedB315
MELO3C008731.2	CmaCh05G007560	Cucurbita maxima (Rimu)	cmamedB831
MELO3C008731.2	CmoCh12G009600	Cucurbita moschata (Rifu)	cmomedB181
MELO3C008731.2	CmoCh05G007990	Cucurbita moschata (Rifu)	cmomedB822
MELO3C008731.2	Lsi11G008670	Bottle gourd (USVL1VR-Ls)	lsimedB123
MELO3C008731.2	Cp4.1LG11g06780	Cucurbita pepo (Zucchini)	cpemedB127
MELO3C008731.2	Cp4.1LG07g08020	Cucurbita pepo (Zucchini)	cpemedB913
MELO3C008731.2	Cla007940	Watermelon (97103) v1	medwmB415
MELO3C008731.2	ClCG11G010740	Watermelon (Charleston Gray)	medwcgB362
MELO3C008731.2	Cla97C11G216950	Watermelon (97103) v2	medwmbB360
MELO3C008731.2	Bhi06G000966	Wax gourd	medwgoB470
MELO3C008731.2	Carg26543	Silver-seed gourd	carmedB0725
MELO3C008731.2	Carg19841	Silver-seed gourd	carmedB0172
MELO3C008731.2	CsaV3_2G009680	Cucumber (Chinese Long) v3	cucmedB134

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C008731.2	Wax gourd	medwgoB456
MELO3C008731.2	Cucumber (Gy14) v2	cgybmedB118
MELO3C008731.2	Cucurbita maxima (Rimu)	cmamedB190