MELO3C008457 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C008457
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
Descriptionhigh-affinity nickel-transport family protein
Locationchr3 : 6796590 .. 6796793 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAATTCAGAGTCTTCTCCGCCAACAATCCGGTGGTTCCGGAGAAAGCACAGACGGCTTTGGAGCCTGCGATTGTGTATAGAGGTGCCGGAAATATGAAATCTGTGATTCCCAAGAAGAGGAAGTTAGTGAAGAGGATGATGTACGATTGTATTAAAGAATGGATCAAATCCCTCTTTCGTCCCACGCCGGAACTTCGGTAA

mRNA sequence

ATGAAATTCAGAGTCTTCTCCGCCAACAATCCGGTGGTTCCGGAGAAAGCACAGACGGCTTTGGAGCCTGCGATTGTGTATAGAGGTGCCGGAAATATGAAATCTGTGATTCCCAAGAAGAGGAAGTTAGTGAAGAGGATGATGTACGATTGTATTAAAGAATGGATCAAATCCCTCTTTCGTCCCACGCCGGAACTTCGGTAA

Coding sequence (CDS)

ATGAAATTCAGAGTCTTCTCCGCCAACAATCCGGTGGTTCCGGAGAAAGCACAGACGGCTTTGGAGCCTGCGATTGTGTATAGAGGTGCCGGAAATATGAAATCTGTGATTCCCAAGAAGAGGAAGTTAGTGAAGAGGATGATGTACGATTGTATTAAAGAATGGATCAAATCCCTCTTTCGTCCCACGCCGGAACTTCGGTAA

Protein sequence

MKFRVFSANNPVVPEKAQTALEPAIVYRGAGNMKSVIPKKRKLVKRMMYDCIKEWIKSLFRPTPELR*
Homology
[Close]
BLAST of MELO3C008457 vs. TrEMBL
Match: A0A0A0KFQ1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G374720 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 7.4e-20
Identity = 51/66 (77.27%), Postives = 57/66 (86.36%), Query Frame = 1 

Query: 1  MKFRVFSANNPVVPEKAQTALEPAIVYRGAGNMKSVIPKKRKLVKRMMYDCIKEWIKSLF 60
          MKFRVFS NN V+P K++TA    IVY GAGN+KSVIPKKR+LVKRMMYDCIKEWIKSLF
Sbjct: 1  MKFRVFSGNNQVIPAKSETA---TIVYGGAGNVKSVIPKKRRLVKRMMYDCIKEWIKSLF 60

Query: 61 RPTPEL 67
           PTP+L
Sbjct: 61 CPTPKL 63

[Close]
BLAST of MELO3C008457 vs. NCBI nr
Match: gi|700192475|gb|KGN47679.1| (hypothetical protein Csa_6G374720 [Cucumis sativus])

HSP 1 Score: 104.0 bits (258), Expect = 1.1e-19
Identity = 51/66 (77.27%), Postives = 57/66 (86.36%), Query Frame = 1 

Query: 1  MKFRVFSANNPVVPEKAQTALEPAIVYRGAGNMKSVIPKKRKLVKRMMYDCIKEWIKSLF 60
          MKFRVFS NN V+P K++TA    IVY GAGN+KSVIPKKR+LVKRMMYDCIKEWIKSLF
Sbjct: 1  MKFRVFSGNNQVIPAKSETA---TIVYGGAGNVKSVIPKKRRLVKRMMYDCIKEWIKSLF 60

Query: 61 RPTPEL 67
           PTP+L
Sbjct: 61 CPTPKL 63

The following BLAST results are available for this feature:
BLAST of MELO3C008457 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KFQ1_CUCSA7.4e-2077.27Uncharacterized protein OS=Cucumis sativus GN=Csa_6G374720 PE=4 SV=1[more]
BLAST of MELO3C008457 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700192475|gb|KGN47679.1|1.1e-1977.27hypothetical protein Csa_6G374720 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C008457T1MELO3C008457T1mRNA