Cp4.1LG01g20830 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG01g20830
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUnknown protein
LocationCp4.1LG01 : 17654705 .. 17655127 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGATTCAGAGTCTCACCGGACGACAATCGGGAGCTACCCGAGCAAAATCCGACCGCCCACCACCCGCCCTCCGTCAATGGCAACCACCTTCCTCCAATCGATCCGGTGAAATCAGAGATTGCAACGTTGACGAAGCTTGCAATCCCATATCAGATCTGCGACGGAAAAGCGAAATCTGTGCTTCCATTGATTCCGGCGAAACCAGATACGGCGGTGACGTCGACTAATTCTGTCGGGTACAGAGCCGGCATCGGAAAAGTGAAATCTGTAATTCCGAAGAAGAGGAAGTTAGTGAAGACGATGATGTACCACTGCATTAAGGACTTCCTCAAATCGCTCTTCCGCCCCCGCCGTAAACCCACCGCCGCCGCCCCAAACCCATTATCCATGACTAGTAAAAATGTCGGATTTTTATCATAA

mRNA sequence

ATGCGATTCAGAGTCTCACCGGACGACAATCGGGAGCTACCCGAGCAAAATCCGACCGCCCACCACCCGCCCTCCGTCAATGGCAACCACCTTCCTCCAATCGATCCGGTGAAATCAGAGATTGCAACGTTGACGAAGCTTGCAATCCCATATCAGATCTGCGACGGAAAAGCGAAATCTGTGCTTCCATTGATTCCGGCGAAACCAGATACGGCGGTGACGTCGACTAATTCTGTCGGGTACAGAGCCGGCATCGGAAAAGTGAAATCTGTAATTCCGAAGAAGAGGAAGTTAGTGAAGACGATGATGTACCACTGCATTAAGGACTTCCTCAAATCGCTCTTCCGCCCCCGCCGTAAACCCACCGCCGCCGCCCCAAACCCATTATCCATGACTAGTAAAAATGTCGGATTTTTATCATAA

Coding sequence (CDS)

ATGCGATTCAGAGTCTCACCGGACGACAATCGGGAGCTACCCGAGCAAAATCCGACCGCCCACCACCCGCCCTCCGTCAATGGCAACCACCTTCCTCCAATCGATCCGGTGAAATCAGAGATTGCAACGTTGACGAAGCTTGCAATCCCATATCAGATCTGCGACGGAAAAGCGAAATCTGTGCTTCCATTGATTCCGGCGAAACCAGATACGGCGGTGACGTCGACTAATTCTGTCGGGTACAGAGCCGGCATCGGAAAAGTGAAATCTGTAATTCCGAAGAAGAGGAAGTTAGTGAAGACGATGATGTACCACTGCATTAAGGACTTCCTCAAATCGCTCTTCCGCCCCCGCCGTAAACCCACCGCCGCCGCCCCAAACCCATTATCCATGACTAGTAAAAATGTCGGATTTTTATCATAA

Protein sequence

MRFRVSPDDNRELPEQNPTAHHPPSVNGNHLPPIDPVKSEIATLTKLAIPYQICDGKAKSVLPLIPAKPDTAVTSTNSVGYRAGIGKVKSVIPKKRKLVKTMMYHCIKDFLKSLFRPRRKPTAAAPNPLSMTSKNVGFLS
BLAST of Cp4.1LG01g20830 vs. TrEMBL
Match: A0A0A0KFQ1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G374720 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 7.3e-06
Identity = 33/57 (57.89%), Postives = 41/57 (71.93%), Query Frame = 1

Query: 64  LIPAKPDTAVTSTNSVGYRAGIGKVKSVIPKKRKLVKTMMYHCIKDFLKSLFRPRRK 121
           +IPAK +TA     ++ Y  G G VKSVIPKKR+LVK MMY CIK+++KSLF P  K
Sbjct: 12  VIPAKSETA-----TIVY-GGAGNVKSVIPKKRRLVKRMMYDCIKEWIKSLFCPTPK 62

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KFQ1_CUCSA7.3e-0657.89Uncharacterized protein OS=Cucumis sativus GN=Csa_6G374720 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g20830.1Cp4.1LG01g20830.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g20830MELO3C008457Melon (DHL92) v3.5.1cpemeB401
Cp4.1LG01g20830MELO3C008457.2Melon (DHL92) v3.6.1cpemedB466
The following gene(s) are paralogous to this gene:

None