MELO3C007896.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C007896.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionDNA ligase 3
Locationchr08 : 6084465 .. 6085239 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAGGTCGGGGAGTCAGAAACAATGGAGTCGATCAGTCTCCACCAAATTCTCGCTTCCAAACCACCGCTCTCAACCATCAACCCTCAAAAATTCTCCCGAACTTCTCAAACTCAGATCTTTTTTCCATCTCTACGCCAACAACGCCCTCTCAGGATCAAACCGATCAACGCCACCGACACCGACGGCGACACCGCACCACCGCAGGTTCCACCGGAAATAACGCCTCCGGAGACGGTTGAGGTGCGGTTTCGTAAGCGGTCGAGAAGAAGATCCAAACGGGAGAGGGAGGATGGAGCGGCGATGGGGAATGGGCGGCCAAGGAAGGCGGCGGTGGAGGTTAGTTCCGGTAAGGCGAAGAAATGGGAGGAGATGAGCGTGGTGGAGAAGGCGATGGAGTTGTATATGGGAGAGAAGGGTTTGTTGTTTTGGCTAAATAAATTTGCTTATGCTTCCATTTTTATTATGATTGGTGGTTGGATTGTGTTTCGTTTCGTCGGGCCTTCGCTAAATCTTTATCAGTTGGATACTCCGCCATTATCTCCGACTTCTGTATTCAAGGGCTCATGATCGTCGGAACCACCTTTCTTTAGTTTCGATCTTTAATCCTTTTTCATACATCATCTATTGCGGCTGTTCAAGTATTGTTGTATCGTTGTAAATTCTTGTACTGGAGATTTCTTAACTGACAAGTGTTTGTGGAGAATTTGGTGGTTATGAATTGGGTTTGATCATTGGATGCAAATTGATATTAAAAAAAACGGATACTTTGTGGAA

mRNA sequence

GAAGGTCGGGGAGTCAGAAACAATGGAGTCGATCAGTCTCCACCAAATTCTCGCTTCCAAACCACCGCTCTCAACCATCAACCCTCAAAAATTCTCCCGAACTTCTCAAACTCAGATCTTTTTTCCATCTCTACGCCAACAACGCCCTCTCAGGATCAAACCGATCAACGCCACCGACACCGACGGCGACACCGCACCACCGCAGGTTCCACCGGAAATAACGCCTCCGGAGACGGTTGAGGTGCGGTTTCGTAAGCGGTCGAGAAGAAGATCCAAACGGGAGAGGGAGGATGGAGCGGCGATGGGGAATGGGCGGCCAAGGAAGGCGGCGGTGGAGGTTAGTTCCGGTAAGGCGAAGAAATGGGAGGAGATGAGCGTGGTGGAGAAGGCGATGGAGTTGTATATGGGAGAGAAGGGTTTGTTGTTTTGGCTAAATAAATTTGCTTATGCTTCCATTTTTATTATGATTGGTGGTTGGATTGTGTTTCGTTTCGTCGGGCCTTCGCTAAATCTTTATCAGTTGGATACTCCGCCATTATCTCCGACTTCTGTATTCAAGGGCTCATGATCGTCGGAACCACCTTTCTTTAGTTTCGATCTTTAATCCTTTTTCATACATCATCTATTGCGGCTGTTCAAGTATTGTTGTATCGTTGTAAATTCTTGTACTGGAGATTTCTTAACTGACAAGTGTTTGTGGAGAATTTGGTGGTTATGAATTGGGTTTGATCATTGGATGCAAATTGATATTAAAAAAAACGGATACTTTGTGGAA

Coding sequence (CDS)

ATGGAGTCGATCAGTCTCCACCAAATTCTCGCTTCCAAACCACCGCTCTCAACCATCAACCCTCAAAAATTCTCCCGAACTTCTCAAACTCAGATCTTTTTTCCATCTCTACGCCAACAACGCCCTCTCAGGATCAAACCGATCAACGCCACCGACACCGACGGCGACACCGCACCACCGCAGGTTCCACCGGAAATAACGCCTCCGGAGACGGTTGAGGTGCGGTTTCGTAAGCGGTCGAGAAGAAGATCCAAACGGGAGAGGGAGGATGGAGCGGCGATGGGGAATGGGCGGCCAAGGAAGGCGGCGGTGGAGGTTAGTTCCGGTAAGGCGAAGAAATGGGAGGAGATGAGCGTGGTGGAGAAGGCGATGGAGTTGTATATGGGAGAGAAGGGTTTGTTGTTTTGGCTAAATAAATTTGCTTATGCTTCCATTTTTATTATGATTGGTGGTTGGATTGTGTTTCGTTTCGTCGGGCCTTCGCTAAATCTTTATCAGTTGGATACTCCGCCATTATCTCCGACTTCTGTATTCAAGGGCTCATGA

Protein sequence

MESISLHQILASKPPLSTINPQKFSRTSQTQIFFPSLRQQRPLRIKPINATDTDGDTAPPQVPPEITPPETVEVRFRKRSRRRSKREREDGAAMGNGRPRKAAVEVSSGKAKKWEEMSVVEKAMELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSVFKGS
Homology
[Close]
BLAST of MELO3C007896.2 vs. NCBI nr
Match: XP_008440811.1 (PREDICTED: uncharacterized protein LOC103485119 [Cucumis melo])

HSP 1 Score: 281.6 bits (719), Expect = 1.9e-72
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0 

Query: 1   MESISLHQILASKPPLSTINPQKFSRTSQTQIFFPSLRQQRPLRIKPINATDTDGXXXXX 60
           MESISLHQILASKPPLSTINPQKFSRTSQTQIFFPSLRQQRPLRIKPINATDTDGXXXXX
Sbjct: 1   MESISLHQILASKPPLSTINPQKFSRTSQTQIFFPSLRQQRPLRIKPINATDTDGXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXEDGAAMGNGRPRKAAVEVSSGKAKKWEEMSVV 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXEDGAAMGNGRPRKAAVEVSSGKAKKWEEMSVV
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXEDGAAMGNGRPRKAAVEVSSGKAKKWEEMSVV 120

Query: 121 EKAMELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSVFKG 180
           EKAMELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSVFKG
Sbjct: 121 EKAMELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSVFKG 180

Query: 181 S 182
           S
Sbjct: 181 S 181

[Close]
BLAST of MELO3C007896.2 vs. NCBI nr
Match: XP_004135030.1 (PREDICTED: uncharacterized protein LOC101202736 [Cucumis sativus] >KGN48906.1 hypothetical protein Csa_6G505840 [Cucumis sativus])

HSP 1 Score: 259.6 bits (662), Expect = 7.8e-66
Identity = 164/181 (90.61%), Postives = 166/181 (91.71%), Query Frame = 0 

Query: 1   MESISLHQILASKPPLSTINPQKFSRTSQTQIFFPSLRQQRPLRIKPINATDTDGXXXXX 60
           MESISLHQILASKPPLSTINPQKFS TSQ QIFFP+LR QRPLRIKPINAT TDG     
Sbjct: 16  MESISLHQILASKPPLSTINPQKFSPTSQIQIFFPTLRHQRPLRIKPINATGTDGDTAPP 75

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXEDGAAMGNGRPRKAAVEVSSGKAKKWEEMSVV 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXEDGAAMGNGRPRKAA EV S K KKWEEMSV 
Sbjct: 76  XXXXXXXXXXXXXXXXXXXXXXXXXXXXEDGAAMGNGRPRKAAAEVGSSKTKKWEEMSVA 135

Query: 121 EKAMELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSVFKG 180
           EK ME+YMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSVFKG
Sbjct: 136 EKTMEVYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSVFKG 195

Query: 181 S 182
           S
Sbjct: 196 S 196

[Close]
BLAST of MELO3C007896.2 vs. NCBI nr
Match: XP_023544554.1 (uncharacterized protein LOC111804097 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 226.1 bits (575), Expect = 9.6e-56
Identity = 148/180 (82.22%), Postives = 157/180 (87.22%), Query Frame = 0 

Query: 1   MESISLHQILASKPPLSTINPQKFSRTSQTQIFFPSLRQQRPLRIKPINATDTDGXXXXX 60
           ME+ SLH+ LASKPPL TI+P KFS TSQ Q+FF SLR Q+PLRIKPINATDTDG    X
Sbjct: 1   MEATSLHRFLASKPPLLTIDPHKFSPTSQNQVFFLSLRHQQPLRIKPINATDTDGDSAPX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXEDGAAMGNGRPRKAAVEVSSGKAKKWEEMSVV 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXXX   AAMGN R RKA VE++S K KKWEEM + 
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAMGNVRARKAPVEIASKKPKKWEEMDLA 120

Query: 121 EKAMELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSVFKG 180
           EKA ELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTS+FKG
Sbjct: 121 EKATELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG 180

[Close]
BLAST of MELO3C007896.2 vs. NCBI nr
Match: XP_022979054.1 (uncharacterized protein LOC111478809 [Cucurbita maxima])

HSP 1 Score: 225.3 bits (573), Expect = 1.6e-55
Identity = 147/180 (81.67%), Postives = 155/180 (86.11%), Query Frame = 0 

Query: 1   MESISLHQILASKPPLSTINPQKFSRTSQTQIFFPSLRQQRPLRIKPINATDTDGXXXXX 60
           MES SLH+ LAS+PPL TI P KFS TSQ Q+FF SLR Q+PLRIKPINATDTDG     
Sbjct: 1   MESTSLHRFLASEPPLLTIGPHKFSPTSQNQVFFLSLRHQQPLRIKPINATDTDGDSAPP 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXEDGAAMGNGRPRKAAVEVSSGKAKKWEEMSVV 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXXX   AAMGN R RKA VE++S K KKWEEM + 
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAMGNVRARKAPVEIASKKPKKWEEMDLA 120

Query: 121 EKAMELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSVFKG 180
           EKA ELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTS+FKG
Sbjct: 121 EKATELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG 180

[Close]
BLAST of MELO3C007896.2 vs. NCBI nr
Match: XP_022950633.1 (uncharacterized protein LOC111453672 [Cucurbita moschata])

HSP 1 Score: 223.4 bits (568), Expect = 6.2e-55
Identity = 147/180 (81.67%), Postives = 156/180 (86.67%), Query Frame = 0 

Query: 1   MESISLHQILASKPPLSTINPQKFSRTSQTQIFFPSLRQQRPLRIKPINATDTDGXXXXX 60
           ME+ SLH+ LASKPPL TI+P KFS TSQ Q+FF SLR Q+PLRIKPINATDTDG    X
Sbjct: 1   MEATSLHRFLASKPPLLTIDPHKFSPTSQNQVFFLSLRHQQPLRIKPINATDTDGDSAPX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXEDGAAMGNGRPRKAAVEVSSGKAKKWEEMSVV 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXXX   AAMGN   RKA VE++S K KKWEEM + 
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAMGNVGARKAPVEIASKKPKKWEEMDLA 120

Query: 121 EKAMELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSVFKG 180
           EKA ELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTS+FKG
Sbjct: 121 EKATELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG 180

[Close]
BLAST of MELO3C007896.2 vs. TAIR10
Match: AT2G17972.1 (unknown protein)

HSP 1 Score: 120.2 bits (300), Expect = 1.3e-27
Identity = 58/92 (63.04%), Postives = 70/92 (76.09%), Query Frame = 0 

Query: 89  EDGAAMGNGRPRKAAVEVSSGKAKKWEEMSVVEKAMELYMGEKGLLFWLNKFAYASIFIM 148
           E+G+  G G+  K    V     K WEEM++ EKA+ELY+GEKGLLFWLNK AYASI+I+
Sbjct: 71  EEGSGEGGGQSGKKKETVQ----KPWEEMTLNEKALELYVGEKGLLFWLNKLAYASIYIV 130

Query: 149 IGGWIVFRFVGPSLNLYQLDTPPLSPTSVFKG 181
           IGGWI FRFVGP+ NLYQLDTPPL P ++ KG
Sbjct: 131 IGGWIFFRFVGPAFNLYQLDTPPLDPKNILKG 158

[Close]
BLAST of MELO3C007896.2 vs. TrEMBL
Match: tr|A0A1S3B215|A0A1S3B215_CUCME (uncharacterized protein LOC103485119 OS=Cucumis melo OX=3656 GN=LOC103485119 PE=4 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 1.3e-72
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0 

Query: 1   MESISLHQILASKPPLSTINPQKFSRTSQTQIFFPSLRQQRPLRIKPINATDTDGXXXXX 60
           MESISLHQILASKPPLSTINPQKFSRTSQTQIFFPSLRQQRPLRIKPINATDTDGXXXXX
Sbjct: 1   MESISLHQILASKPPLSTINPQKFSRTSQTQIFFPSLRQQRPLRIKPINATDTDGXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXEDGAAMGNGRPRKAAVEVSSGKAKKWEEMSVV 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXEDGAAMGNGRPRKAAVEVSSGKAKKWEEMSVV
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXEDGAAMGNGRPRKAAVEVSSGKAKKWEEMSVV 120

Query: 121 EKAMELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSVFKG 180
           EKAMELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSVFKG
Sbjct: 121 EKAMELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSVFKG 180

Query: 181 S 182
           S
Sbjct: 181 S 181

[Close]
BLAST of MELO3C007896.2 vs. TrEMBL
Match: tr|A0A0A0KME2|A0A0A0KME2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G505840 PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 5.2e-66
Identity = 164/181 (90.61%), Postives = 166/181 (91.71%), Query Frame = 0 

Query: 1   MESISLHQILASKPPLSTINPQKFSRTSQTQIFFPSLRQQRPLRIKPINATDTDGXXXXX 60
           MESISLHQILASKPPLSTINPQKFS TSQ QIFFP+LR QRPLRIKPINAT TDG     
Sbjct: 16  MESISLHQILASKPPLSTINPQKFSPTSQIQIFFPTLRHQRPLRIKPINATGTDGDTAPP 75

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXEDGAAMGNGRPRKAAVEVSSGKAKKWEEMSVV 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXEDGAAMGNGRPRKAA EV S K KKWEEMSV 
Sbjct: 76  XXXXXXXXXXXXXXXXXXXXXXXXXXXXEDGAAMGNGRPRKAAAEVGSSKTKKWEEMSVA 135

Query: 121 EKAMELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSVFKG 180
           EK ME+YMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSVFKG
Sbjct: 136 EKTMEVYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSVFKG 195

Query: 181 S 182
           S
Sbjct: 196 S 196

[Close]
BLAST of MELO3C007896.2 vs. TrEMBL
Match: tr|A0A2P5FP07|A0A2P5FP07_9ROSA (Transmembrane protein OS=Trema orientalis OX=63057 GN=TorRG33x02_046400 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 2.5e-28
Identity = 64/86 (74.42%), Postives = 75/86 (87.21%), Query Frame = 0 

Query: 96  NGRPRKAAVEVSSGKAKKWEEMSVVEKAMELYMGEKGLLFWLNKFAYASIFIMIGGWIVF 155
           +G  + AA   +  K KKWE+MSV EKA+ELY+GEKG+LFWLNKFAYASIFI+IGGWI+F
Sbjct: 93  DGFAKAAATTATPVKKKKWEDMSVAEKAVELYVGEKGVLFWLNKFAYASIFIVIGGWILF 152

Query: 156 RFVGPSLNLYQLDTPPLSPTSVFKGS 182
           RFVGPSLNLYQLD+PPLSP S+FKGS
Sbjct: 153 RFVGPSLNLYQLDSPPLSPDSMFKGS 178

[Close]
BLAST of MELO3C007896.2 vs. TrEMBL
Match: tr|A0A067LQC1|A0A067LQC1_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_06522 PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 4.3e-28
Identity = 83/183 (45.36%), Postives = 104/183 (56.83%), Query Frame = 0 

Query: 1   MESISLHQILASKPPLSTINPQKF--SRTSQTQIFFPSLRQQRPLRIKPINATDTDGXXX 60
           MES  + Q L+SK   STI    +  S T QT+IF P  R+   L     + T++ G   
Sbjct: 1   MES-KILQFLSSKSLPSTIFVYTYPSSTTPQTRIFLPCQRKSSRL----YSTTNSSGAGD 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDGAAMGNGRPRKAAVEVSSGKAKKWEEMS 120
                                          +G A+          ++     KKWE+MS
Sbjct: 61  NDEARPTVAPPETVEIRFKRGSRKRNKRQSGEGKAV-------MKTQIIPDPPKKWEDMS 120

Query: 121 VVEKAMELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSVF 180
           + EKA+ELYMGEKG+LFWLNKFAYASIFI+IGGWI+FRFVGPSLNLYQLDTPPL+PT++F
Sbjct: 121 ITEKAVELYMGEKGMLFWLNKFAYASIFIVIGGWILFRFVGPSLNLYQLDTPPLAPTNMF 171

Query: 181 KGS 182
           KGS
Sbjct: 181 KGS 171

[Close]
BLAST of MELO3C007896.2 vs. TrEMBL
Match: tr|B9MXH0|B9MXH0_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_005G115000v3 PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 4.3e-28
Identity = 78/166 (46.99%), Postives = 98/166 (59.04%), Query Frame = 0 

Query: 16  LSTINPQKFSRTSQTQIFFPSLRQQRPLRIKPINATDTDGXXXXXXXXXXXXXXXXXXXX 75
           LS + P   +   Q Q+ F  LR+QR LR+   N+T +D                     
Sbjct: 24  LSILTPPPATTRIQNQLCF--LRRQRSLRLNATNSTSSDETPPAAQPPTITPPDTVEIRF 83

Query: 76  XXXXXXXXXXXXXEDGAAMGNGRPRKAAVEVSSGKAKKWEEMSVVEKAMELYMGEKGLLF 135
                        + G  +G  +P KA     +   KKWE+MS+ EKA+ELY+GEKG+LF
Sbjct: 84  KRGSRRRTRMQKGDGG--VGVSQPVKA----QASAPKKWEDMSLSEKAIELYVGEKGMLF 143

Query: 136 WLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSVFKGS 182
           WLNKFAYASIFI+IGGWI+FRFVGPSLNLYQLDT PLSP+S+ KGS
Sbjct: 144 WLNKFAYASIFIVIGGWILFRFVGPSLNLYQLDTAPLSPSSILKGS 181

The following BLAST results are available for this feature:
BLAST of MELO3C007896.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008440811.11.9e-72100.00PREDICTED: uncharacterized protein LOC103485119 [Cucumis melo][more]
XP_004135030.17.8e-6690.61PREDICTED: uncharacterized protein LOC101202736 [Cucumis sativus] >KGN48906.1 hy... [more]
XP_023544554.19.6e-5682.22uncharacterized protein LOC111804097 [Cucurbita pepo subsp. pepo][more]
XP_022979054.11.6e-5581.67uncharacterized protein LOC111478809 [Cucurbita maxima][more]
XP_022950633.16.2e-5581.67uncharacterized protein LOC111453672 [Cucurbita moschata][more]
BLAST of MELO3C007896.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G17972.11.3e-2763.04unknown protein[more]
BLAST of MELO3C007896.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C007896.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3B215|A0A1S3B215_CUCME1.3e-72100.00uncharacterized protein LOC103485119 OS=Cucumis melo OX=3656 GN=LOC103485119 PE=... [more]
tr|A0A0A0KME2|A0A0A0KME2_CUCSA5.2e-6690.61Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G505840 PE=4 SV=1[more]
tr|A0A2P5FP07|A0A2P5FP07_9ROSA2.5e-2874.42Transmembrane protein OS=Trema orientalis OX=63057 GN=TorRG33x02_046400 PE=4 SV=... [more]
tr|A0A067LQC1|A0A067LQC1_JATCU4.3e-2845.36Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_06522 PE=4 SV=1[more]
tr|B9MXH0|B9MXH0_POPTR4.3e-2846.99Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_005G115000v3 PE=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR021262DUF2839
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0016556 mRNA modification
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005575 cellular_component
molecular_function GO:0016874 ligase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C007896.2.1MELO3C007896.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021262Protein of unknown function DUF2839PFAMPF10999DUF2839coord: 94..162
e-value: 1.4E-4
score: 22.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 48..107
NoneNo IPR availablePANTHERPTHR36347FAMILY NOT NAMEDcoord: 8..181

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C007896.2Csa6G505840Cucumber (Chinese Long) v2cumedB483
MELO3C007896.2CSPI06G31700Wild cucumber (PI 183967)cpimedB493
MELO3C007896.2Cucsa.043500Cucumber (Gy14) v1cgymedB024
MELO3C007896.2CmaCh03G006920Cucurbita maxima (Rimu)cmamedB703
MELO3C007896.2CmoCh03G007180Cucurbita moschata (Rifu)cmomedB694
MELO3C007896.2Lsi01G006080Bottle gourd (USVL1VR-Ls)lsimedB163
MELO3C007896.2Cp4.1LG10g00200Cucurbita pepo (Zucchini)cpemedB080
MELO3C007896.2Cla014278Watermelon (97103) v1medwmB559
MELO3C007896.2ClCG01G020240Watermelon (Charleston Gray)medwcgB509
MELO3C007896.2Bhi03G000648Wax gourdmedwgoB658
MELO3C007896.2Carg00597Silver-seed gourdcarmedB0418
MELO3C007896.2CsaV3_6G047030Cucumber (Chinese Long) v3cucmedB505
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C007896.2Watermelon (97103) v2medwmbB505
MELO3C007896.2Watermelon (97103) v2medwmbB544
MELO3C007896.2Watermelon (97103) v2medwmbB551
MELO3C007896.2Cucumber (Gy14) v2cgybmedB129
MELO3C007896.2Cucumber (Gy14) v2cgybmedB223
MELO3C007896.2Cucumber (Gy14) v2cgybmedB440
MELO3C007896.2Cucumber (Gy14) v1cgymedB562
MELO3C007896.2Cucurbita maxima (Rimu)cmamedB048
MELO3C007896.2Cucurbita maxima (Rimu)cmamedB204
MELO3C007896.2Cucurbita maxima (Rimu)cmamedB518
MELO3C007896.2Cucurbita maxima (Rimu)cmamedB670
MELO3C007896.2Cucurbita maxima (Rimu)cmamedB839
MELO3C007896.2Cucurbita maxima (Rimu)cmamedB907
MELO3C007896.2Cucurbita moschata (Rifu)cmomedB039
MELO3C007896.2Cucurbita moschata (Rifu)cmomedB193
MELO3C007896.2Cucurbita moschata (Rifu)cmomedB506
MELO3C007896.2Cucurbita moschata (Rifu)cmomedB829
MELO3C007896.2Cucurbita moschata (Rifu)cmomedB896
MELO3C007896.2Cucurbita pepo (Zucchini)cpemedB134
MELO3C007896.2Cucurbita pepo (Zucchini)cpemedB325
MELO3C007896.2Cucurbita pepo (Zucchini)cpemedB531
MELO3C007896.2Cucurbita pepo (Zucchini)cpemedB649
MELO3C007896.2Cucurbita pepo (Zucchini)cpemedB840
MELO3C007896.2Cucurbita pepo (Zucchini)cpemedB875
MELO3C007896.2Wild cucumber (PI 183967)cpimedB144
MELO3C007896.2Wild cucumber (PI 183967)cpimedB249
MELO3C007896.2Cucumber (Chinese Long) v2cumedB143
MELO3C007896.2Cucumber (Chinese Long) v2cumedB247
MELO3C007896.2Melon (DHL92) v3.6.1medmedB131
MELO3C007896.2Melon (DHL92) v3.6.1medmedB142
MELO3C007896.2Bottle gourd (USVL1VR-Ls)lsimedB347
MELO3C007896.2Bottle gourd (USVL1VR-Ls)lsimedB512
MELO3C007896.2Watermelon (Charleston Gray)medwcgB545
MELO3C007896.2Watermelon (97103) v1medwmB548
MELO3C007896.2Watermelon (97103) v1medwmB558
MELO3C007896.2Silver-seed gourdcarmedB0653
MELO3C007896.2Silver-seed gourdcarmedB0966
MELO3C007896.2Cucumber (Chinese Long) v3cucmedB145
MELO3C007896.2Cucumber (Chinese Long) v3cucmedB254