CmoCh03G007180 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATAAAAGCAACTCCACCAGTCGAAGTGCTCACTTCTCAGCACATGGAAGCGACCAGTCTCCACCGATTTCTGGCGTCTAAACCGCCGCTCTTGACCATCGATCCACATAAATTCTCCCCTACATCTCAGAATCAGGTATTCTTTCTATCTCTACGCCATCAACAGCCTCTCAGGATCAAACCGATCAACGCCACGGACACCGATGGCGACAGCGCGCCACCGCAGGTTCCACCGGCAATAACGCCTCCGGAGACGGTTGATGTTCGGTTTCGGAAGAGGTCGAGAAGACGATCGAAACAGGAGAGCGAGGATGGAGCGGCGATGGGGAATGTGGGGGCGAGAAAGGCGCCGGTGGAGATTGCTTCCAAGAAGCCGAAGAAATGGGAGGAGATGGACTTGGCGGAGAAGGCGACGGAGCTGTATATGGGAGAGAAGGGTTTGTTGTTTTGGCTAAACAAGTTTGCTTATGCTTCCATTTTTATCATGATTGGTGGTTGGATTGTGTTCCGATTTGTTGGGCCTTCGCTCAATCTTTACCAGTTGGATACTCCACCATTATCTCCGACTTCCATTTTCAAGGGCTGA ATGGATAAAAGCAACTCCACCAGTCGAAGTGCTCACTTCTCAGCACATGGAAGCGACCAGTCTCCACCGATTTCTGGCGTATTCTTTCTATCTCTACGCCATCAACAGCCTCTCAGGATCAAACCGATCAACGCCACGGACACCGATGGCGACAGCGCGCCACCGCAGGTTCCACCGGCAATAACGCCTCCGGAGACGGTTGATGTTCGGTTTCGGAAGAGGTCGAGAAGACGATCGAAACAGGAGAGCGAGGATGGAGCGGCGATGGGGAATGTGGGGGCGAGAAAGGCGCCGGTGGAGATTGCTTCCAAGAAGCCGAAGAAATGGGAGGAGATGGACTTGGCGGAGAAGGCGACGGAGCTGTATATGGGAGAGAAGGGTTTGTTGTTTTGGCTAAACAAGTTTGCTTATGCTTCCATTTTTATCATGATTGGTGGTTGGATTGTGTTCCGATTTGTTGGGCCTTCGCTCAATCTTTACCAGTTGGATACTCCACCATTATCTCCGACTTCCATTTTCAAGGGCTGA ATGGATAAAAGCAACTCCACCAGTCGAAGTGCTCACTTCTCAGCACATGGAAGCGACCAGTCTCCACCGATTTCTGGCGTATTCTTTCTATCTCTACGCCATCAACAGCCTCTCAGGATCAAACCGATCAACGCCACGGACACCGATGGCGACAGCGCGCCACCGCAGGTTCCACCGGCAATAACGCCTCCGGAGACGGTTGATGTTCGGTTTCGGAAGAGGTCGAGAAGACGATCGAAACAGGAGAGCGAGGATGGAGCGGCGATGGGGAATGTGGGGGCGAGAAAGGCGCCGGTGGAGATTGCTTCCAAGAAGCCGAAGAAATGGGAGGAGATGGACTTGGCGGAGAAGGCGACGGAGCTGTATATGGGAGAGAAGGGTTTGTTGTTTTGGCTAAACAAGTTTGCTTATGCTTCCATTTTTATCATGATTGGTGGTTGGATTGTGTTCCGATTTGTTGGGCCTTCGCTCAATCTTTACCAGTTGGATACTCCACCATTATCTCCGACTTCCATTTTCAAGGGCTGA
BLAST of CmoCh03G007180 vs. TrEMBL
Match: A0A0A0KME2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G505840 PE=4 SV=1) HSP 1 Score: 256.5 bits (654), Expect = 2.3e-65 Identity = 125/149 (83.89%), Postives = 134/149 (89.93%), Query Frame = 1
BLAST of CmoCh03G007180 vs. TrEMBL
Match: B9MXH0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s11710g PE=4 SV=1) HSP 1 Score: 174.5 bits (441), Expect = 1.1e-40 Identity = 88/144 (61.11%), Postives = 112/144 (77.78%), Query Frame = 1
BLAST of CmoCh03G007180 vs. TrEMBL
Match: B9SXL8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0017380 PE=4 SV=1) HSP 1 Score: 169.5 bits (428), Expect = 3.7e-39 Identity = 84/132 (63.64%), Postives = 102/132 (77.27%), Query Frame = 1
BLAST of CmoCh03G007180 vs. TrEMBL
Match: V4RVF1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026620mg PE=4 SV=1) HSP 1 Score: 166.8 bits (421), Expect = 2.4e-38 Identity = 87/143 (60.84%), Postives = 109/143 (76.22%), Query Frame = 1
BLAST of CmoCh03G007180 vs. TrEMBL
Match: W9SCS4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_026693 PE=4 SV=1) HSP 1 Score: 165.2 bits (417), Expect = 7.0e-38 Identity = 91/158 (57.59%), Postives = 114/158 (72.15%), Query Frame = 1
BLAST of CmoCh03G007180 vs. TAIR10
Match: AT2G17972.1 (AT2G17972.1 unknown protein) HSP 1 Score: 134.4 bits (337), Expect = 6.7e-32 Identity = 75/143 (52.45%), Postives = 93/143 (65.03%), Query Frame = 1
BLAST of CmoCh03G007180 vs. NCBI nr
Match: gi|659080474|ref|XP_008440811.1| (PREDICTED: uncharacterized protein LOC103485119 [Cucumis melo]) HSP 1 Score: 258.1 bits (658), Expect = 1.1e-65 Identity = 127/149 (85.23%), Postives = 136/149 (91.28%), Query Frame = 1
BLAST of CmoCh03G007180 vs. NCBI nr
Match: gi|449434492|ref|XP_004135030.1| (PREDICTED: uncharacterized protein LOC101202736 [Cucumis sativus]) HSP 1 Score: 256.5 bits (654), Expect = 3.3e-65 Identity = 125/149 (83.89%), Postives = 134/149 (89.93%), Query Frame = 1
BLAST of CmoCh03G007180 vs. NCBI nr
Match: gi|566170851|ref|XP_006383116.1| (hypothetical protein POPTR_0005s11710g [Populus trichocarpa]) HSP 1 Score: 174.5 bits (441), Expect = 1.6e-40 Identity = 88/144 (61.11%), Postives = 112/144 (77.78%), Query Frame = 1
BLAST of CmoCh03G007180 vs. NCBI nr
Match: gi|743899830|ref|XP_011043206.1| (PREDICTED: uncharacterized protein LOC105138730 [Populus euphratica]) HSP 1 Score: 174.5 bits (441), Expect = 1.6e-40 Identity = 88/144 (61.11%), Postives = 112/144 (77.78%), Query Frame = 1
BLAST of CmoCh03G007180 vs. NCBI nr
Match: gi|1009144230|ref|XP_015889684.1| (PREDICTED: uncharacterized protein LOC107424405 [Ziziphus jujuba]) HSP 1 Score: 170.6 bits (431), Expect = 2.4e-39 Identity = 92/149 (61.74%), Postives = 112/149 (75.17%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |