Csa6G505840 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa6G505840
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionWGS project CAID00000000 data, contig chromosome 18
LocationChr6 : 25723303 .. 25724134 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATAAAGCAACTCCAGAATACGAAGGTCGGGAGTCAGAAACAATGGAATCAATCAGTCTCCACCAAATTCTCGCTTCTAAACCACCGCTCTCAACCATCAATCCTCAAAAATTCTCCCCAACTTCTCAAATTCAGATCTTCTTTCCAACTCTACGCCACCAACGCCCTCTCAGGATCAAACCGATCAACGCCACTGGCACCGACGGCGACACCGCACCACCGCAGGTTCCGCCGGAAATAACGCCTCCGGAGACGGTTGAAGTGCGGTTTCGTAAGCGGTCGAGAAGACGATCAAAACAGGAGAGGGAGGATGGAGCGGCGATGGGAAATGGGCGGCCGAGAAAGGCGGCAGCGGAGGTTGGTTCCAGTAAGACGAAGAAATGGGAGGAGATGAGCGTGGCGGAAAAGACGATGGAGGTGTATATGGGAGAGAAGGGTTTGTTGTTTTGGCTAAACAAATTTGCTTATGCTTCCATTTTTATTATGATTGGTGGTTGGATTGTGTTTCGATTCGTCGGGCCTTCGCTAAATCTTTATCAGTTGGATACTCCGCCATTATCTCCGACTTCTGTATTCAAGGGCTCATGATCGTCGGAACCACCTTCCTTTAGTTTCGATCTTTAATCCTTTTTCATACATCATCTATCGCGGCTGTTCAAGTATTGTTGTAAATTCTTGTACTGGAGATTTCTTAACTGACAAGTGTTAGTGGAGAATTTGGTGATTATGAATTTTGGGTTTGATCATTAGAATACTTTGTGGAAGATATTGTGAGTTATCTATTAGTGGAAGACACTGAAATATCTTTAGCTTTACCCTTCACTGATTC

mRNA sequence

ATGGATAAAGCAACTCCAGAATACGAAGGTCGGGAGTCAGAAACAATGGAATCAATCAGTCTCCACCAAATTCTCGCTTCTAAACCACCGCTCTCAACCATCAATCCTCAAAAATTCTCCCCAACTTCTCAAATTCAGATCTTCTTTCCAACTCTACGCCACCAACGCCCTCTCAGGATCAAACCGATCAACGCCACTGGCACCGACGGCGACACCGCACCACCGCAGGTTCCGCCGGAAATAACGCCTCCGGAGACGGTTGAAGTGCGGTTTCGTAAGCGGTCGAGAAGACGATCAAAACAGGAGAGGGAGGATGGAGCGGCGATGGGAAATGGGCGGCCGAGAAAGGCGGCAGCGGAGGTTGGTTCCAGTAAGACGAAGAAATGGGAGGAGATGAGCGTGGCGGAAAAGACGATGGAGGTGTATATGGGAGAGAAGGGTTTGTTGTTTTGGCTAAACAAATTTGCTTATGCTTCCATTTTTATTATGATTGGTGGTTGGATTGTGTTTCGATTCGTCGGGCCTTCGCTAAATCTTTATCAGTTGGATACTCCGCCATTATCTCCGACTTCTGTATTCAAGGGCTCATGA

Coding sequence (CDS)

ATGGATAAAGCAACTCCAGAATACGAAGGTCGGGAGTCAGAAACAATGGAATCAATCAGTCTCCACCAAATTCTCGCTTCTAAACCACCGCTCTCAACCATCAATCCTCAAAAATTCTCCCCAACTTCTCAAATTCAGATCTTCTTTCCAACTCTACGCCACCAACGCCCTCTCAGGATCAAACCGATCAACGCCACTGGCACCGACGGCGACACCGCACCACCGCAGGTTCCGCCGGAAATAACGCCTCCGGAGACGGTTGAAGTGCGGTTTCGTAAGCGGTCGAGAAGACGATCAAAACAGGAGAGGGAGGATGGAGCGGCGATGGGAAATGGGCGGCCGAGAAAGGCGGCAGCGGAGGTTGGTTCCAGTAAGACGAAGAAATGGGAGGAGATGAGCGTGGCGGAAAAGACGATGGAGGTGTATATGGGAGAGAAGGGTTTGTTGTTTTGGCTAAACAAATTTGCTTATGCTTCCATTTTTATTATGATTGGTGGTTGGATTGTGTTTCGATTCGTCGGGCCTTCGCTAAATCTTTATCAGTTGGATACTCCGCCATTATCTCCGACTTCTGTATTCAAGGGCTCATGA

Protein sequence

MDKATPEYEGRESETMESISLHQILASKPPLSTINPQKFSPTSQIQIFFPTLRHQRPLRIKPINATGTDGDTAPPQVPPEITPPETVEVRFRKRSRRRSKQEREDGAAMGNGRPRKAAAEVGSSKTKKWEEMSVAEKTMEVYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSVFKGS*
Homology
[Close]
BLAST of Csa6G505840 vs. TrEMBL
Match: A0A0A0KME2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G505840 PE=4 SV=1)

HSP 1 Score: 397.9 bits (1021), Expect = 7.2e-108
Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 1 

Query: 1   MDKATPEYEGRESETMESISLHQILASKPPLSTINPQKFSPTSQIQIFFPTLRHQRPLRI 60
           MDKATPEYEGRESETMESISLHQILASKPPLSTINPQKFSPTSQIQIFFPTLRHQRPLRI
Sbjct: 1   MDKATPEYEGRESETMESISLHQILASKPPLSTINPQKFSPTSQIQIFFPTLRHQRPLRI 60

Query: 61  KPINATGTDGDTAPPQVPPEITPPETVEVRFRKRSRRRSKQEREDGAAMGNGRPRKAAAE 120
           KPINATGTDGDTAPPQVPPEITPPETVEVRFRKRSRRRSKQEREDGAAMGNGRPRKAAAE
Sbjct: 61  KPINATGTDGDTAPPQVPPEITPPETVEVRFRKRSRRRSKQEREDGAAMGNGRPRKAAAE 120

Query: 121 VGSSKTKKWEEMSVAEKTMEVYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLY 180
           VGSSKTKKWEEMSVAEKTMEVYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLY
Sbjct: 121 VGSSKTKKWEEMSVAEKTMEVYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLY 180

Query: 181 QLDTPPLSPTSVFKGS 197
           QLDTPPLSPTSVFKGS
Sbjct: 181 QLDTPPLSPTSVFKGS 196

[Close]
BLAST of Csa6G505840 vs. TrEMBL
Match: B9MXH0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s11710g PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 1.9e-44
Identity = 102/179 (56.98%), Postives = 130/179 (72.63%), Query Frame = 1 

Query: 25  LASKPPLSTI----NPQKFSP---TSQIQIFFPTLRHQRPLRIKPINATGTDGDTAPPQV 84
           L SK P STI    N    +P   T++IQ     LR QR LR+   N+T +D +T P   
Sbjct: 9   LPSKSPPSTIPIHSNLSILTPPPATTRIQNQLCFLRRQRSLRLNATNSTSSD-ETPPAAQ 68

Query: 85  PPEITPPETVEVRFRKRSRRRSKQEREDGAAMGNGRPRKAAAEVGSSKTKKWEEMSVAEK 144
           PP ITPP+TVE+RF++ SRRR++ ++ DG  +G  +P KA A    S  KKWE+MS++EK
Sbjct: 69  PPTITPPDTVEIRFKRGSRRRTRMQKGDGG-VGVSQPVKAQA----SAPKKWEDMSLSEK 128

Query: 145 TMEVYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSVFKGS 197
            +E+Y+GEKG+LFWLNKFAYASIFI+IGGWI+FRFVGPSLNLYQLDT PLSP+S+ KGS
Sbjct: 129 AIELYVGEKGMLFWLNKFAYASIFIVIGGWILFRFVGPSLNLYQLDTAPLSPSSILKGS 181

[Close]
BLAST of Csa6G505840 vs. TrEMBL
Match: B9SXL8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0017380 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 4.3e-44
Identity = 103/179 (57.54%), Postives = 128/179 (71.51%), Query Frame = 1 

Query: 23  QILASKPPLSTI----NPQKFSPTSQIQIFFPTLRHQRPLRIKPINATGTDGDTAPPQV- 82
           Q + SK   STI    NP   + T Q + F P  R  R LR+   +  GT+ +   PQV 
Sbjct: 7   QFITSKSLTSTIHIYTNPSTVNTTPQTRNFIPHRR--RWLRLCS-STNGTEANEDTPQVA 66

Query: 83  PPEITPPETVEVRFRKRSRRRSKQEREDGAAMGNGRPRKAAAEVGSSKTKKWEEMSVAEK 142
           PP ITPPE +E+RFR+RS++R+KQ+RE G  +G G+  KA A       KKWE+MS+AEK
Sbjct: 67  PPTITPPEPMEIRFRRRSKKRNKQQREGG--VGRGQSAKAQAP---DPPKKWEDMSLAEK 126

Query: 143 TMEVYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSVFKGS 197
            +E+YMGEKG+LFWLNKFAYASIFI+IGGWI+FRFVGPSLNLYQLDT PL P+S+FKGS
Sbjct: 127 ALELYMGEKGILFWLNKFAYASIFIVIGGWILFRFVGPSLNLYQLDTQPLPPSSMFKGS 177

[Close]
BLAST of Csa6G505840 vs. TrEMBL
Match: V4RVF1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026620mg PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 1.6e-43
Identity = 98/183 (53.55%), Postives = 129/183 (70.49%), Query Frame = 1 

Query: 16  MESISLHQILASKPPLSTIN-PQKFSPTSQIQIFFPTLRHQRPLRIKPINAT-GTDGDTA 75
           M +  L  + ++ PP S+I  P K S T+    +       RP+R++PI++T G+  + A
Sbjct: 1   MNTNILQTLASNAPPSSSIRIPLKPSTTATTNTY-----RGRPIRLRPISSTSGSSSNDA 60

Query: 76  PPQVPPEITPPETVEVRFRKRSRRRSKQEREDGAAMGNGRPRKAAAEVGSSKTKKWEEMS 135
           P  VPP ITPP+TVE+RFR+ SRR+ +Q RE     G GR ++      S+  KKWE+MS
Sbjct: 61  PQPVPPPITPPDTVEIRFRRGSRRQ-RQRRE-----GRGREKQPLETQASATPKKWEDMS 120

Query: 136 VAEKTMEVYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSVF 195
           ++EK M++YMGEKGLLFWLNKFAYASIFI IG WI+FRFVGPSLNLYQLD  PLSP+++F
Sbjct: 121 LSEKAMDLYMGEKGLLFWLNKFAYASIFITIGAWILFRFVGPSLNLYQLDAAPLSPSNMF 172

Query: 196 KGS 197
           KGS
Sbjct: 181 KGS 172

[Close]
BLAST of Csa6G505840 vs. TrEMBL
Match: W9SCS4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_026693 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 2.8e-43
Identity = 103/180 (57.22%), Postives = 126/180 (70.00%), Query Frame = 1 

Query: 25  LASKPPLSTINPQKFSPTSQIQIFFPTLRHQRPLRIKPINATGTDGDTAPPQVP------ 84
           L +KPPL T    K S T++     P+ RH+ PL+  PI+++ +  +     V       
Sbjct: 8   LVTKPPLPT-TLTKHSTTAKYPTLLPS-RHRPPLKFSPISSSSSSNNANESSVSESDNLP 67

Query: 85  -PEITPP-ETVEVRFRKRSRRRSKQEREDGAAMGNGRPRKAAAEVGSSKTKKWEEMSVAE 144
            P+ITPP ETVEVRFR+RSRRRS Q+R+D      G  R A AE    + KKWE+M+VAE
Sbjct: 68  RPQITPPPETVEVRFRRRSRRRSNQQRDDK----KGDRRLAKAEQAPVQ-KKWEDMNVAE 127

Query: 145 KTMEVYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSVFKGS 197
           K M +Y+GEKGLLFWLNKFAYASIFI+IGGWI FRFVGPSLNLYQLD+PPLSP S+FKGS
Sbjct: 128 KAMALYVGEKGLLFWLNKFAYASIFIVIGGWIFFRFVGPSLNLYQLDSPPLSPDSMFKGS 180

[Close]
BLAST of Csa6G505840 vs. TAIR10
Match: AT2G17972.1 (AT2G17972.1 unknown protein)

HSP 1 Score: 137.9 bits (346), Expect = 6.8e-33
Identity = 81/177 (45.76%), Postives = 106/177 (59.89%), Query Frame = 1 

Query: 20  SLHQILASKPPLSTINPQKFSPTSQIQIFFPTLRHQRPLRIKPINATGTDGDTAPPQVPP 79
           SLH  LA    +  +  Q ++ T + Q+      H+   R   IN   + GD        
Sbjct: 3   SLH-FLAPNSTIINLKQQSYTKT-KFQL------HRSNRRTLSINCVNSGGDEE------ 62

Query: 80  EITPP-ETVEVRFRKRSRRRSKQEREDGAAMGNGRPRKAAAEVGSSKTKKWEEMSVAEKT 139
           +IT P + VE+RF++ SRR+    RE+G+  G G+  K    V     K WEEM++ EK 
Sbjct: 63  KITQPLDGVEIRFKRGSRRKM---REEGSGEGGGQSGKKKETV----QKPWEEMTLNEKA 122

Query: 140 MEVYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSVFKG 196
           +E+Y+GEKGLLFWLNK AYASI+I+IGGWI FRFVGP+ NLYQLDTPPL P ++ KG
Sbjct: 123 LELYVGEKGLLFWLNKLAYASIYIVIGGWIFFRFVGPAFNLYQLDTPPLDPKNILKG 158

[Close]
BLAST of Csa6G505840 vs. NCBI nr
Match: gi|449434492|ref|XP_004135030.1| (PREDICTED: uncharacterized protein LOC101202736 [Cucumis sativus])

HSP 1 Score: 397.9 bits (1021), Expect = 1.0e-107
Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 1 

Query: 1   MDKATPEYEGRESETMESISLHQILASKPPLSTINPQKFSPTSQIQIFFPTLRHQRPLRI 60
           MDKATPEYEGRESETMESISLHQILASKPPLSTINPQKFSPTSQIQIFFPTLRHQRPLRI
Sbjct: 1   MDKATPEYEGRESETMESISLHQILASKPPLSTINPQKFSPTSQIQIFFPTLRHQRPLRI 60

Query: 61  KPINATGTDGDTAPPQVPPEITPPETVEVRFRKRSRRRSKQEREDGAAMGNGRPRKAAAE 120
           KPINATGTDGDTAPPQVPPEITPPETVEVRFRKRSRRRSKQEREDGAAMGNGRPRKAAAE
Sbjct: 61  KPINATGTDGDTAPPQVPPEITPPETVEVRFRKRSRRRSKQEREDGAAMGNGRPRKAAAE 120

Query: 121 VGSSKTKKWEEMSVAEKTMEVYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLY 180
           VGSSKTKKWEEMSVAEKTMEVYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLY
Sbjct: 121 VGSSKTKKWEEMSVAEKTMEVYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLY 180

Query: 181 QLDTPPLSPTSVFKGS 197
           QLDTPPLSPTSVFKGS
Sbjct: 181 QLDTPPLSPTSVFKGS 196

[Close]
BLAST of Csa6G505840 vs. NCBI nr
Match: gi|659080474|ref|XP_008440811.1| (PREDICTED: uncharacterized protein LOC103485119 [Cucumis melo])

HSP 1 Score: 341.3 bits (874), Expect = 1.1e-90
Identity = 168/181 (92.82%), Postives = 171/181 (94.48%), Query Frame = 1 

Query: 16  MESISLHQILASKPPLSTINPQKFSPTSQIQIFFPTLRHQRPLRIKPINATGTDGDTAPP 75
           MESISLHQILASKPPLSTINPQKFS TSQ QIFFP+LR QRPLRIKPINAT TDGDTAPP
Sbjct: 1   MESISLHQILASKPPLSTINPQKFSRTSQTQIFFPSLRQQRPLRIKPINATDTDGDTAPP 60

Query: 76  QVPPEITPPETVEVRFRKRSRRRSKQEREDGAAMGNGRPRKAAAEVGSSKTKKWEEMSVA 135
           QVPPEITPPETVEVRFRKRSRRRSK+EREDGAAMGNGRPRKAA EV S K KKWEEMSV 
Sbjct: 61  QVPPEITPPETVEVRFRKRSRRRSKREREDGAAMGNGRPRKAAVEVSSGKAKKWEEMSVV 120

Query: 136 EKTMEVYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSVFKG 195
           EK ME+YMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSVFKG
Sbjct: 121 EKAMELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSVFKG 180

Query: 196 S 197
           S
Sbjct: 181 S 181

[Close]
BLAST of Csa6G505840 vs. NCBI nr
Match: gi|1009144230|ref|XP_015889684.1| (PREDICTED: uncharacterized protein LOC107424405 [Ziziphus jujuba])

HSP 1 Score: 201.8 bits (512), Expect = 1.1e-48
Identity = 114/190 (60.00%), Postives = 142/190 (74.74%), Query Frame = 1 

Query: 16  MESISLHQILASKPPLSTINPQKFSPTSQIQIFFPTLRHQRPLRIKPI-----NATGTDG 75
           M++  LH  LA+ PP  T+  +K S T + QIF PT+  +RPL+I PI      + GTD 
Sbjct: 1   MDAKLLHS-LATLPP--TLAAEKSSTTVRYQIFSPTIC-RRPLKITPIFSKTTTSNGTDP 60

Query: 76  DT---APPQVPPEITPPETVEVRFRKRSRRRSKQEREDGAAMGNGRPRKAAAEVGSSKTK 135
           D+   + PQ PP +TPPETVE+RFR+RSR RS+++REDG   G+GR  KA +   +   K
Sbjct: 61  DSISNSAPQSPP-VTPPETVEIRFRRRSRGRSRKQREDGN--GDGRVTKAKSAAAAPPVK 120

Query: 136 -KWEEMSVAEKTMEVYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPP 195
            KWE+MSVAEK +EVYMGEKGLLFWLNKFAYASIFIMIG WI+FRFVGP+LNLYQLD+ P
Sbjct: 121 RKWEDMSVAEKAVEVYMGEKGLLFWLNKFAYASIFIMIGAWILFRFVGPALNLYQLDSAP 180

Query: 196 LSPTSVFKGS 197
           LSP+S+FKGS
Sbjct: 181 LSPSSIFKGS 183

[Close]
BLAST of Csa6G505840 vs. NCBI nr
Match: gi|566170851|ref|XP_006383116.1| (hypothetical protein POPTR_0005s11710g [Populus trichocarpa])

HSP 1 Score: 187.2 bits (474), Expect = 2.8e-44
Identity = 102/179 (56.98%), Postives = 130/179 (72.63%), Query Frame = 1 

Query: 25  LASKPPLSTI----NPQKFSP---TSQIQIFFPTLRHQRPLRIKPINATGTDGDTAPPQV 84
           L SK P STI    N    +P   T++IQ     LR QR LR+   N+T +D +T P   
Sbjct: 9   LPSKSPPSTIPIHSNLSILTPPPATTRIQNQLCFLRRQRSLRLNATNSTSSD-ETPPAAQ 68

Query: 85  PPEITPPETVEVRFRKRSRRRSKQEREDGAAMGNGRPRKAAAEVGSSKTKKWEEMSVAEK 144
           PP ITPP+TVE+RF++ SRRR++ ++ DG  +G  +P KA A    S  KKWE+MS++EK
Sbjct: 69  PPTITPPDTVEIRFKRGSRRRTRMQKGDGG-VGVSQPVKAQA----SAPKKWEDMSLSEK 128

Query: 145 TMEVYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSVFKGS 197
            +E+Y+GEKG+LFWLNKFAYASIFI+IGGWI+FRFVGPSLNLYQLDT PLSP+S+ KGS
Sbjct: 129 AIELYVGEKGMLFWLNKFAYASIFIVIGGWILFRFVGPSLNLYQLDTAPLSPSSILKGS 181

[Close]
BLAST of Csa6G505840 vs. NCBI nr
Match: gi|743899830|ref|XP_011043206.1| (PREDICTED: uncharacterized protein LOC105138730 [Populus euphratica])

HSP 1 Score: 186.0 bits (471), Expect = 6.2e-44
Identity = 96/166 (57.83%), Postives = 124/166 (74.70%), Query Frame = 1 

Query: 31  LSTINPQKFSPTSQIQIFFPTLRHQRPLRIKPINATGTDGDTAPPQVPPEITPPETVEVR 90
           LS + P   +   Q Q+ F  LR QR LR+   N+T +D +T P   PP ITPP+TVE+R
Sbjct: 24  LSILTPPPATTRIQNQLCF--LRRQRSLRLNATNSTSSD-ETPPAAQPPTITPPDTVEIR 83

Query: 91  FRKRSRRRSKQEREDGAAMGNGRPRKAAAEVGSSKTKKWEEMSVAEKTMEVYMGEKGLLF 150
           F++ SRRR++ ++ DG  +G  +P KA A    S  KKWE+MS++EK +E+Y+GEKG+LF
Sbjct: 84  FKRGSRRRTRMQKGDGG-VGVSQPVKAQA----SAPKKWEDMSLSEKAIELYVGEKGMLF 143

Query: 151 WLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSVFKGS 197
           WLNKFAYASIFI+IGGWI+FRFVGPSLNLYQLDT PLSP+S+ KGS
Sbjct: 144 WLNKFAYASIFIVIGGWILFRFVGPSLNLYQLDTAPLSPSSILKGS 181

The following BLAST results are available for this feature:
BLAST of Csa6G505840 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KME2_CUCSA7.2e-108100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G505840 PE=4 SV=1[more]
B9MXH0_POPTR1.9e-4456.98Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s11710g PE=4 SV=1[more]
B9SXL8_RICCO4.3e-4457.54Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0017380 PE=4 SV=1[more]
V4RVF1_9ROSI1.6e-4353.55Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026620mg PE=4 SV=1[more]
W9SCS4_9ROSA2.8e-4357.22Uncharacterized protein OS=Morus notabilis GN=L484_026693 PE=4 SV=1[more]
BLAST of Csa6G505840 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G17972.16.8e-3345.76 unknown protein[more]
BLAST of Csa6G505840 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449434492|ref|XP_004135030.1|1.0e-107100.00PREDICTED: uncharacterized protein LOC101202736 [Cucumis sativus][more]
gi|659080474|ref|XP_008440811.1|1.1e-9092.82PREDICTED: uncharacterized protein LOC103485119 [Cucumis melo][more]
gi|1009144230|ref|XP_015889684.1|1.1e-4860.00PREDICTED: uncharacterized protein LOC107424405 [Ziziphus jujuba][more]
gi|566170851|ref|XP_006383116.1|2.8e-4456.98hypothetical protein POPTR_0005s11710g [Populus trichocarpa][more]
gi|743899830|ref|XP_011043206.1|6.2e-4457.83PREDICTED: uncharacterized protein LOC105138730 [Populus euphratica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016556 mRNA modification
biological_process GO:0008150 biological_process
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU094134cucumber EST collection version 3.0transcribed_cluster
CU117471cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa6G505840.1Csa6G505840.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU117471CU117471transcribed_cluster
CU094134CU094134transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36347FAMILY NOT NAMEDcoord: 4..196
score: 7.2
NoneNo IPR availablePANTHERPTHR36347:SF1EXPRESSED PROTEINcoord: 4..196
score: 7.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa6G505840Cla014278Watermelon (97103) v1cuwmB500
Csa6G505840MELO3C007896Melon (DHL92) v3.5.1cumeB503
Csa6G505840ClCG01G020240Watermelon (Charleston Gray)cuwcgB432
Csa6G505840Lsi01G006080Bottle gourd (USVL1VR-Ls)culsiB434
Csa6G505840MELO3C007896.2Melon (DHL92) v3.6.1cumedB483
Csa6G505840Bhi03G000648Wax gourdcuwgoB628
Csa6G505840CSPI06G31700Wild cucumber (PI 183967)cpicuB313
Csa6G505840Cucsa.043500Cucumber (Gy14) v1cgycuB027
Csa6G505840CmaCh03G006920Cucurbita maxima (Rimu)cmacuB681
Csa6G505840CmoCh03G007180Cucurbita moschata (Rifu)cmocuB670
Csa6G505840Cp4.1LG10g00200Cucurbita pepo (Zucchini)cpecuB085
Csa6G505840Carg00597Silver-seed gourdcarcuB0441
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa6G505840Cucumber (Chinese Long) v2cucuB065
Csa6G505840Cucumber (Chinese Long) v2cucuB112
Csa6G505840Cucumber (Gy14) v1cgycuB241
Csa6G505840Cucumber (Gy14) v1cgycuB484
Csa6G505840Cucurbita maxima (Rimu)cmacuB200
Csa6G505840Cucurbita maxima (Rimu)cmacuB877
Csa6G505840Cucurbita moschata (Rifu)cmocuB181
Csa6G505840Cucurbita moschata (Rifu)cmocuB865
Csa6G505840Melon (DHL92) v3.5.1cumeB480
Csa6G505840Melon (DHL92) v3.5.1cumeB485
Csa6G505840Watermelon (Charleston Gray)cuwcgB512
Csa6G505840Watermelon (97103) v1cuwmB473
Csa6G505840Watermelon (97103) v1cuwmB496
Csa6G505840Cucurbita pepo (Zucchini)cpecuB286
Csa6G505840Cucurbita pepo (Zucchini)cpecuB503
Csa6G505840Cucurbita pepo (Zucchini)cpecuB585
Csa6G505840Bottle gourd (USVL1VR-Ls)culsiB451
Csa6G505840Bottle gourd (USVL1VR-Ls)culsiB484
Csa6G505840Cucumber (Gy14) v2cgybcuB077
Csa6G505840Cucumber (Gy14) v2cgybcuB140
Csa6G505840Cucumber (Gy14) v2cgybcuB281
Csa6G505840Melon (DHL92) v3.6.1cumedB433
Csa6G505840Melon (DHL92) v3.6.1cumedB459
Csa6G505840Melon (DHL92) v3.6.1cumedB465
Csa6G505840Silver-seed gourdcarcuB0663
Csa6G505840Silver-seed gourdcarcuB0996
Csa6G505840Watermelon (97103) v2cuwmbB412
Csa6G505840Watermelon (97103) v2cuwmbB464
Csa6G505840Watermelon (97103) v2cuwmbB503