MELO3C007790.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C007790.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	Translation initiation factor IF-2, putative isoform 2
Location	chr08 : 5383885 .. 5386789 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACAGCACTATTATTCAATTTCAAACGACCATCTTCTCCCGCCCAATCTTCTTGCCCACGTCTCAACGTCGGTTCTCCGGCAGAGCTGAAAAAGAGGAAGAGACAGATTTCGCGGCAGTCACCGGCGTAGATTAATCCATTTATTTCCATCTCCCGCGCCTACATTTCTTCATGCTTTGGAATCCCACTGCGAGCTTCAATTAATTTCACTGCGCACTACATTAGGGTTTGAAAGTCTTTTATACAGTTGAAAATCCAGTGACGAAATACGGATTCATCTCAGAATGCTGCAACCTGAGTAGTTCAGTAAAGTCAAGAAAGATTGGTAGCTGAGAATGGCAAGGCGAAAGGCGAAGAAAACAGTTAAGAAGTCCAACCCTTCACCCGTACTAGAAGCAAAGGATGAAACAGCGAATGACGAGGATGGTATGTTGAAATTCGTAGTGATTTGATCCTTTTTCCTGAACCCGGAATTTAATTGAAAGAAATTCGTAGTGATTTGATCCTTCCCGTTAACATAATTGTTCCGCTGTTTTCCCCTTTACTTGTGTTTAGTTGAACGGCATGCTGCTGCAATCCGTGCCATTCGGGATGTGGAGATCGGGCGTTTGATTACTGAATTGCGGTTGCTTCGTTCGTATTTCAACAAGGAGCAATTACAAACTCCTTTATTGCAATTCTTCGAAGAAAAACTTCCTAGGTTGTCTATTTCGAGAACAGGCGAACAAGGAGAAATTGAAGTACAATGGAAGGATACAGAGGATGAGTTACGCACCAATCCAGCTGATGGAATAGATATACATGCGTCTCTCCTTCACCGCCTGTCGATAGCTTATCCTAACTGCTCTGCCGGAATGCGATCTTTCAATGGATTCGAATTTTCCAGTAAATCAGGTATCTGTAGATTTTGGATCGCAAAATCAATTGGTAAACGCCCCCTTATATGATGCTTCTTTGTTGCAACTCACCTTCTTTTGTCTACTGGTGGCAGTGAAAACGAATCCTTTCATTGTCGAGAACCTGCAAATTCCGAACTTCGTAAGTAATTTTTGCATATGATATCTGAAATCGTATAATAGTAGAACCAGTTATATGGTGCGAGCTCACAACATATGATTTAGTTTGTCTATATCTTTTGTTTCATGTTGCTGATTTGTGGAAGAACGCTACTAGAAATAAAACCGTGAACAATTTGGTATTGACTTATTGACTTATTGATTTATTGATTTATTAACGATTCTTGATTTTAGGATTTGGAGGAGCCCTCGGATAATATGGTGCTCGGCATGCCAGACATACTCCAAACTCCTGGGGTTCGTATCTTTATGGTTTTTGCATATCGCTTATTGCATTAGCCTTTTCATGTTAATATCCTATAGCTGTCTGTTATTGCCATTTTTTCACTATTTGGCGGCGTTTTCACTTAAATTATCTAGGCACATTGATTGTCGGGGTCTAAGGAATGGAATTACTGTATGATAGATAGGTGTCTGCCATCAATTATTAATGTTTTATTTTCAATAATTAACGGTGTTTTGTTTTAAATATGTAACGGTGTCTAAGCTAATTCATGTCTATTAGTTGGGATTTATTGCCTCAATCTGTCAATAAGTTTGAGTTGTGACTTCTTGGTTATAAGTTGGGATCTTGTTACCCACCATCAGTTAAACTTAGTGGTTAATGAAGTCTAAATGTAGGGAATAAGTTATCCCACTACCAAATATTTGATATCCTGCGAGTTTTTTGAAAATTAAAGTAGGGTCACATTATGATGGTTTTTTCTGTGAGGATAATTGAGGCTAAAAAGCGACTTAAAGAAGACATGACCTCCATATACTCATTAGTAAATTGGAAATGAACTTTGCACCTAGTATTAATAGAATGCTATTTGAAACTTGGAAAACACTAGTTTATGGAACAATGGACTATACATAGTTTTGTTTTTTCTTCTCTCTTTTAATGGTTCATTTTGGATTTGAATATTTCTATTCCCAATAGAGGAGAAAAATTAAGTTCCGAGCTAAGTTGCAACAAATTATTGGGAGGCGGGGTTATTAGATTGTAGAGGGAATGAGGGAAGTGCTGGCTTCATTTCTAGTAATTAATTTATAGATACAAATCATTTATTTGTTAAGACAGGGAAAATCTTGAACCCATGAAGGAAGCTGCAAAGATGAATTCTAAGTACAAAGATCGGCATGGTTTTTACTAAAAAATACATGTAAAGATTATATTTTAAGAACATTTCAGGCTTGTTTGAGGAACTATCCTAACAAAACTTGCTTAAGGCTGTTTTTGGCATTTTTGCCTCTATTTAGTCTATTATACTATAACTATAAGCTAACTAGCTGTCGTTCTATAGGTGATTAACCAACGATTGTCCATTGGGATGACTCCGAAAACCCGAAGACTGCCAAAACCAGGCGAGATGCTTGTGTCCATCCATGGATCCCCTTTGGGTGTTTACAAGGAAGACAACATGGAAGCAATCCATGGTATGCTCATTTAGGTCATTTTCATTTCTAGACATGGAGTATTTTGGTGGGTATATATAAATCGTGCTTCTACGTTTTTCTAATGGGTCAATTGATATTGTGCAGAATCGGAAGAGGGTTGATTTGCTGATTCAAGGCAACCTGACTGCTTGTCAATAGAAGTGATACTCCAACAATCATCTCGACCATTGTTTTACTCATACCTGATGTACTTTCAACCTTCTTGTCTTGTATCTAACCTTTTGATTACTCGTTAAAAGTTACTCTTATGTGTATAACTATAAACTATTGTGTTTTTAACTACAAGGAACGAGCATGTACAAACATGCAATTGGTCAACTAGATTCTTGTGCATTGTTATTTGTTGCGAAAGTTGTATTGGATTAAAGGTGAATCACAGGTTACATCAT

mRNA sequence

AACAGCACTATTATTCAATTTCAAACGACCATCTTCTCCCGCCCAATCTTCTTGCCCACGTCTCAACGTCGGTTCTCCGGCAGAGCTGAAAAAGAGGAAGAGACAGATTTCGCGGCAGTCACCGGCGTAGATTAATCCATTTATTTCCATCTCCCGCGCCTACATTTCTTCATGCTTTGGAATCCCACTGCGAGCTTCAATTAATTTCACTGCGCACTACATTAGGGTTTGAAAGTCTTTTATACAGTTGAAAATCCAGTGACGAAATACGGATTCATCTCAGAATGCTGCAACCTGAGTAGTTCAGTAAAGTCAAGAAAGATTGGTAGCTGAGAATGGCAAGGCGAAAGGCGAAGAAAACAGTTAAGAAGTCCAACCCTTCACCCGTACTAGAAGCAAAGGATGAAACAGCGAATGACGAGGATGTTGAACGGCATGCTGCTGCAATCCGTGCCATTCGGGATGTGGAGATCGGGCGTTTGATTACTGAATTGCGGTTGCTTCGTTCGTATTTCAACAAGGAGCAATTACAAACTCCTTTATTGCAATTCTTCGAAGAAAAACTTCCTAGGTTGTCTATTTCGAGAACAGGCGAACAAGGAGAAATTGAAGTACAATGGAAGGATACAGAGGATGAGTTACGCACCAATCCAGCTGATGGAATAGATATACATGCGTCTCTCCTTCACCGCCTGTCGATAGCTTATCCTAACTGCTCTGCCGGAATGCGATCTTTCAATGGATTCGAATTTTCCAGTAAATCAGTGAAAACGAATCCTTTCATTGTCGAGAACCTGCAAATTCCGAACTTCGATTTGGAGGAGCCCTCGGATAATATGGTGCTCGGCATGCCAGACATACTCCAAACTCCTGGGGTGATTAACCAACGATTGTCCATTGGGATGACTCCGAAAACCCGAAGACTGCCAAAACCAGGCGAGATGCTTGTGTCCATCCATGGATCCCCTTTGGGTGTTTACAAGGAAGACAACATGGAAGCAATCCATGAATCGGAAGAGGGTTGATTTGCTGATTCAAGGCAACCTGACTGCTTGTCAATAGAAGTGATACTCCAACAATCATCTCGACCATTGTTTTACTCATACCTGATGTACTTTCAACCTTCTTGTCTTGTATCTAACCTTTTGATTACTCGTTAAAAGTTACTCTTATGTGTATAACTATAAACTATTGTGTTTTTAACTACAAGGAACGAGCATGTACAAACATGCAATTGGTCAACTAGATTCTTGTGCATTGTTATTTGTTGCGAAAGTTGTATTGGATTAAAGGTGAATCACAGGTTACATCAT

Coding sequence (CDS)

ATGGCAAGGCGAAAGGCGAAGAAAACAGTTAAGAAGTCCAACCCTTCACCCGTACTAGAAGCAAAGGATGAAACAGCGAATGACGAGGATGTTGAACGGCATGCTGCTGCAATCCGTGCCATTCGGGATGTGGAGATCGGGCGTTTGATTACTGAATTGCGGTTGCTTCGTTCGTATTTCAACAAGGAGCAATTACAAACTCCTTTATTGCAATTCTTCGAAGAAAAACTTCCTAGGTTGTCTATTTCGAGAACAGGCGAACAAGGAGAAATTGAAGTACAATGGAAGGATACAGAGGATGAGTTACGCACCAATCCAGCTGATGGAATAGATATACATGCGTCTCTCCTTCACCGCCTGTCGATAGCTTATCCTAACTGCTCTGCCGGAATGCGATCTTTCAATGGATTCGAATTTTCCAGTAAATCAGTGAAAACGAATCCTTTCATTGTCGAGAACCTGCAAATTCCGAACTTCGATTTGGAGGAGCCCTCGGATAATATGGTGCTCGGCATGCCAGACATACTCCAAACTCCTGGGGTGATTAACCAACGATTGTCCATTGGGATGACTCCGAAAACCCGAAGACTGCCAAAACCAGGCGAGATGCTTGTGTCCATCCATGGATCCCCTTTGGGTGTTTACAAGGAAGACAACATGGAAGCAATCCATGAATCGGAAGAGGGTTGA

Protein sequence

MARRKAKKTVKKSNPSPVLEAKDETANDEDVERHAAAIRAIRDVEIGRLITELRLLRSYFNKEQLQTPLLQFFEEKLPRLSISRTGEQGEIEVQWKDTEDELRTNPADGIDIHASLLHRLSIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNFDLEEPSDNMVLGMPDILQTPGVINQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESEEG

Homology

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BLAST of MELO3C007790.2 vs. NCBI nr
Match: XP_008440665.1 (PREDICTED: uncharacterized protein LOC103485008 [Cucumis melo])

HSP 1 Score: 449.1 bits (1154), Expect = 8.8e-123
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0


Query: 1   MARRKAKKTVKKSNPSPVLEAKDETANDEDVERHAAAIRAIRDVEIGRLITELRLLRSYF 60
           MARRKAKKTVKKSNPSPVLEAKDETANDEDVERHAAAIRAIRDVEIGRLITELRLLRSYF
Sbjct: 1   MARRKAKKTVKKSNPSPVLEAKDETANDEDVERHAAAIRAIRDVEIGRLITELRLLRSYF 60

Query: 61  NKEQLQTPLLQFFEEKLPRLSISRTGEQGEIEVQWKDTEDELRTNPADGIDIHASLLHRL 120
           NKEQLQTPLLQFFEEKLPRLSISRTGEQGEIEVQWKDTEDELRTNPADGIDIHASLLHRL
Sbjct: 61  NKEQLQTPLLQFFEEKLPRLSISRTGEQGEIEVQWKDTEDELRTNPADGIDIHASLLHRL 120

Query: 121 SIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNFDLEEPSDNMVLGMPDILQTPG 180
           SIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNFDLEEPSDNMVLGMPDILQTPG
Sbjct: 121 SIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNFDLEEPSDNMVLGMPDILQTPG 180

Query: 181 VINQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESEEG 230
           VINQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESEEG
Sbjct: 181 VINQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESEEG 229

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BLAST of MELO3C007790.2 vs. NCBI nr
Match: XP_004143493.1 (PREDICTED: uncharacterized protein LOC101215210 [Cucumis sativus] >KGN48787.1 hypothetical protein Csa_6G501280 [Cucumis sativus])

HSP 1 Score: 429.5 bits (1103), Expect = 7.2e-117
Identity = 220/229 (96.07%), Postives = 223/229 (97.38%), Query Frame = 0


Query: 1   MARRKAKKTVKKSNPSPVLEAKDETANDEDVERHAAAIRAIRDVEIGRLITELRLLRSYF 60
           MARRKAKKTVKKS+PSP+LEAKDE ANDEDVERHAAAIRAIRDVEI RLIT LRLLRSYF
Sbjct: 1   MARRKAKKTVKKSSPSPILEAKDEAANDEDVERHAAAIRAIRDVEIERLITVLRLLRSYF 60

Query: 61  NKEQLQTPLLQFFEEKLPRLSISRTGEQGEIEVQWKDTEDELRTNPADGIDIHASLLHRL 120
           NKEQLQTPLLQFFEEKLPRLSISRTGEQGEIEVQWKDTEDELRTNPADGIDIHASLLHRL
Sbjct: 61  NKEQLQTPLLQFFEEKLPRLSISRTGEQGEIEVQWKDTEDELRTNPADGIDIHASLLHRL 120

Query: 121 SIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNFDLEEPSDNMVLGMPDILQTPG 180
           SIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNF LEEPSDN+VLGMPDI QTPG
Sbjct: 121 SIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNFVLEEPSDNLVLGMPDIHQTPG 180

Query: 181 VINQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESEEG 230
           V NQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESEEG
Sbjct: 181 VSNQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESEEG 229

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BLAST of MELO3C007790.2 vs. NCBI nr
Match: XP_023543921.1 (uncharacterized protein LOC111803645 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 402.1 bits (1032), Expect = 1.2e-108
Identity = 210/241 (87.14%), Postives = 218/241 (90.46%), Query Frame = 0


Query: 1   MARRKAKKTVKKSNPSPVLEAKDETAN------------DEDVERHAAAIRAIRDVEIGR 60
           MARRKAKK+VKKS+PSPV EAKD +AN            DEDVERHA AIRAIRDVEI R
Sbjct: 1   MARRKAKKSVKKSSPSPVREAKDGSANELKSEDQASLVSDEDVERHATAIRAIRDVEIER 60

Query: 61  LITELRLLRSYFNKEQLQTPLLQFFEEKLPRLSISRTGEQGEIEVQWKDTEDELRTNPAD 120
           LITELRLLRSYFNKEQLQTPLLQFFEEKLP LSISR GEQGEIEVQWK+TEDEL TNPAD
Sbjct: 61  LITELRLLRSYFNKEQLQTPLLQFFEEKLPSLSISRRGEQGEIEVQWKNTEDELHTNPAD 120

Query: 121 GIDIHASLLHRLSIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNFDLEEPSDNM 180
           GIDIHASLLHRLS AYPNCSAGMRSFNGFEFSSKSVKTNPF VENLQIPNF LEEPSDNM
Sbjct: 121 GIDIHASLLHRLSTAYPNCSAGMRSFNGFEFSSKSVKTNPFNVENLQIPNFALEEPSDNM 180

Query: 181 VLGMPDILQTPGVINQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESEE 230
           VLGMPD+LQTPGV NQRLSIGMTPKTRRLPKPGE+LVSIHGSPLGVY+E+NMEAIHESEE
Sbjct: 181 VLGMPDLLQTPGVSNQRLSIGMTPKTRRLPKPGEVLVSIHGSPLGVYREENMEAIHESEE 240

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BLAST of MELO3C007790.2 vs. NCBI nr
Match: XP_016900279.1 (PREDICTED: uncharacterized protein LOC103489436 [Cucumis melo])

HSP 1 Score: 397.1 bits (1019), Expect = 4.0e-107
Identity = 208/235 (88.51%), Postives = 213/235 (90.64%), Query Frame = 0


Query: 1   MARRKAKKTVKKSNPSPVLEAKDETA------NDEDVERHAAAIRAIRDVEIGRLITELR 60
           MARRKAKKTVKKS+PS    AKDE A      +DEDVERHAAAIRAIRDVEI RLITELR
Sbjct: 1   MARRKAKKTVKKSSPSSGRHAKDEAADKIKTHSDEDVERHAAAIRAIRDVEIERLITELR 60

Query: 61  LLRSYFNKEQLQTPLLQFFEEKLPRLSISRTGEQGEIEVQWKDTEDELRTNPADGIDIHA 120
           LLRSYFNKEQLQTPLLQFFEEKLP LSIS  G+QGEIEVQWKDTEDEL TNPADG+DIHA
Sbjct: 61  LLRSYFNKEQLQTPLLQFFEEKLPSLSISIRGDQGEIEVQWKDTEDELHTNPADGVDIHA 120

Query: 121 SLLHRLSIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNFDLEEPSDNMVLGMPD 180
           SLLHRLS AYP CSAGMRSFNGFEFSSKSVKTNPF  ENLQIPNF LEEPSDNMVLGMPD
Sbjct: 121 SLLHRLSTAYPYCSAGMRSFNGFEFSSKSVKTNPFNAENLQIPNFVLEEPSDNMVLGMPD 180

Query: 181 ILQTPGVINQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESEEG 230
           ILQTPG+ NQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESEEG
Sbjct: 181 ILQTPGISNQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESEEG 235

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BLAST of MELO3C007790.2 vs. NCBI nr
Match: XP_022978547.1 (uncharacterized protein LOC111478496 [Cucurbita maxima])

HSP 1 Score: 392.9 bits (1008), Expect = 7.5e-106
Identity = 206/240 (85.83%), Postives = 214/240 (89.17%), Query Frame = 0


Query: 1   MARRKAKKTVKKSNPSPVLEAKDETAN------------DEDVERHAAAIRAIRDVEIGR 60
           MARRKAKK+VKKS+PSPV EAKD +AN            DEDVERHA AIRAIRDVEI R
Sbjct: 1   MARRKAKKSVKKSSPSPVREAKDGSANELKSEDQASLVSDEDVERHATAIRAIRDVEIER 60

Query: 61  LITELRLLRSYFNKEQLQTPLLQFFEEKLPRLSISRTGEQGEIEVQWKDTEDELRTNPAD 120
           LITELRLLRSYFNKEQLQTPLLQFF EKLP LSISR GEQGEIEVQWKDTEDEL TNPAD
Sbjct: 61  LITELRLLRSYFNKEQLQTPLLQFFVEKLPSLSISRRGEQGEIEVQWKDTEDELHTNPAD 120

Query: 121 GIDIHASLLHRLSIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNFDLEEPSDNM 180
           GIDIHASLLHRLS AYPNCSAG+RSFNGFEFSSKSVKTNPF VENLQIPNF LEEPSDNM
Sbjct: 121 GIDIHASLLHRLSTAYPNCSAGIRSFNGFEFSSKSVKTNPFNVENLQIPNFVLEEPSDNM 180

Query: 181 VLGMPDILQTPGVINQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESEE 229
           VLGMPD+LQTPG  NQRLSIGMTPKTRRLPKPGE++VSIHGSPLGVY+E NMEAIHESEE
Sbjct: 181 VLGMPDLLQTPGASNQRLSIGMTPKTRRLPKPGEVIVSIHGSPLGVYREYNMEAIHESEE 240

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BLAST of MELO3C007790.2 vs. TAIR10
Match: AT4G39630.1 (unknown protein)

HSP 1 Score: 151.0 bits (380), Expect = 9.0e-37
Identity = 98/232 (42.24%), Postives = 130/232 (56.03%), Query Frame = 0


Query: 1   MARRKAKKTVKKSNPSP------VLEAKDETANDEDVERHAAAIRAIRDVEIGRLITELR 60
           M +RKAK+ VK +           +E K E   DE+VER  AAIR               
Sbjct: 1   MPKRKAKECVKLTEEDRNDEKRIRIEEKKEDFVDEEVERQIAAIRXXXXXXXXXXXXXXX 60

Query: 61  LLRSYFNKEQLQTPLLQFFEEKLPRLSISRTGEQGEIEVQWKDTEDELRTNPADGIDIHA 120
                     L TP+L FF+E LP LSISR  E GEIE++W+D   +      +G+D++ 
Sbjct: 61  XXXXXXXXXXLHTPVLDFFKENLPDLSISRNEETGEIELKWRDENGDSFAGNENGVDMNY 120

Query: 121 SLLHRLSIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNFDLEEPSDNMVLGMPD 180
           S+L RLS+ + +  +   S  G++    +VK N    +N Q+ N   +  S+N +L   D
Sbjct: 121 SILKRLSMRFTDLYS-RSSLGGYDLPD-NVKANLLGTDNPQLDNLVFQGTSENQMLPGHD 180

Query: 181 ILQTPGVINQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKED-NMEAIHE 226
             QTPGV  QRLS GMTPKT RLPK GEM++S+HGSPLGVYKED NM AI+E
Sbjct: 181 AFQTPGVNGQRLSFGMTPKTLRLPKAGEMMLSVHGSPLGVYKEDHNMGAINE 230

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BLAST of MELO3C007790.2 vs. TrEMBL
Match: tr|A0A1S3B1M1|A0A1S3B1M1_CUCME (uncharacterized protein LOC103485008 OS=Cucumis melo OX=3656 GN=LOC103485008 PE=4 SV=1)

HSP 1 Score: 449.1 bits (1154), Expect = 5.8e-123
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0


Query: 1   MARRKAKKTVKKSNPSPVLEAKDETANDEDVERHAAAIRAIRDVEIGRLITELRLLRSYF 60
           MARRKAKKTVKKSNPSPVLEAKDETANDEDVERHAAAIRAIRDVEIGRLITELRLLRSYF
Sbjct: 1   MARRKAKKTVKKSNPSPVLEAKDETANDEDVERHAAAIRAIRDVEIGRLITELRLLRSYF 60

Query: 61  NKEQLQTPLLQFFEEKLPRLSISRTGEQGEIEVQWKDTEDELRTNPADGIDIHASLLHRL 120
           NKEQLQTPLLQFFEEKLPRLSISRTGEQGEIEVQWKDTEDELRTNPADGIDIHASLLHRL
Sbjct: 61  NKEQLQTPLLQFFEEKLPRLSISRTGEQGEIEVQWKDTEDELRTNPADGIDIHASLLHRL 120

Query: 121 SIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNFDLEEPSDNMVLGMPDILQTPG 180
           SIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNFDLEEPSDNMVLGMPDILQTPG
Sbjct: 121 SIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNFDLEEPSDNMVLGMPDILQTPG 180

Query: 181 VINQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESEEG 230
           VINQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESEEG
Sbjct: 181 VINQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESEEG 229

[Close]

BLAST of MELO3C007790.2 vs. TrEMBL
Match: tr|A0A0A0KK81|A0A0A0KK81_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G501280 PE=4 SV=1)

HSP 1 Score: 429.5 bits (1103), Expect = 4.8e-117
Identity = 220/229 (96.07%), Postives = 223/229 (97.38%), Query Frame = 0


Query: 1   MARRKAKKTVKKSNPSPVLEAKDETANDEDVERHAAAIRAIRDVEIGRLITELRLLRSYF 60
           MARRKAKKTVKKS+PSP+LEAKDE ANDEDVERHAAAIRAIRDVEI RLIT LRLLRSYF
Sbjct: 1   MARRKAKKTVKKSSPSPILEAKDEAANDEDVERHAAAIRAIRDVEIERLITVLRLLRSYF 60

Query: 61  NKEQLQTPLLQFFEEKLPRLSISRTGEQGEIEVQWKDTEDELRTNPADGIDIHASLLHRL 120
           NKEQLQTPLLQFFEEKLPRLSISRTGEQGEIEVQWKDTEDELRTNPADGIDIHASLLHRL
Sbjct: 61  NKEQLQTPLLQFFEEKLPRLSISRTGEQGEIEVQWKDTEDELRTNPADGIDIHASLLHRL 120

Query: 121 SIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNFDLEEPSDNMVLGMPDILQTPG 180
           SIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNF LEEPSDN+VLGMPDI QTPG
Sbjct: 121 SIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNFVLEEPSDNLVLGMPDIHQTPG 180

Query: 181 VINQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESEEG 230
           V NQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESEEG
Sbjct: 181 VSNQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESEEG 229

[Close]

BLAST of MELO3C007790.2 vs. TrEMBL
Match: tr|A0A1S4DWB9|A0A1S4DWB9_CUCME (uncharacterized protein LOC103489436 OS=Cucumis melo OX=3656 GN=LOC103489436 PE=4 SV=1)

HSP 1 Score: 397.1 bits (1019), Expect = 2.6e-107
Identity = 208/235 (88.51%), Postives = 213/235 (90.64%), Query Frame = 0


Query: 1   MARRKAKKTVKKSNPSPVLEAKDETA------NDEDVERHAAAIRAIRDVEIGRLITELR 60
           MARRKAKKTVKKS+PS    AKDE A      +DEDVERHAAAIRAIRDVEI RLITELR
Sbjct: 1   MARRKAKKTVKKSSPSSGRHAKDEAADKIKTHSDEDVERHAAAIRAIRDVEIERLITELR 60

Query: 61  LLRSYFNKEQLQTPLLQFFEEKLPRLSISRTGEQGEIEVQWKDTEDELRTNPADGIDIHA 120
           LLRSYFNKEQLQTPLLQFFEEKLP LSIS  G+QGEIEVQWKDTEDEL TNPADG+DIHA
Sbjct: 61  LLRSYFNKEQLQTPLLQFFEEKLPSLSISIRGDQGEIEVQWKDTEDELHTNPADGVDIHA 120

Query: 121 SLLHRLSIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNFDLEEPSDNMVLGMPD 180
           SLLHRLS AYP CSAGMRSFNGFEFSSKSVKTNPF  ENLQIPNF LEEPSDNMVLGMPD
Sbjct: 121 SLLHRLSTAYPYCSAGMRSFNGFEFSSKSVKTNPFNAENLQIPNFVLEEPSDNMVLGMPD 180

Query: 181 ILQTPGVINQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESEEG 230
           ILQTPG+ NQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESEEG
Sbjct: 181 ILQTPGISNQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESEEG 235

[Close]

BLAST of MELO3C007790.2 vs. TrEMBL
Match: tr|A0A0A0KRH4|A0A0A0KRH4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G622550 PE=4 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 3.9e-103
Identity = 204/240 (85.00%), Postives = 211/240 (87.92%), Query Frame = 0


Query: 1   MARRKAKKTVKKSNPSPVLEAKDETAN------DEDVERHAAAIRAIRDVEIGRLITELR 60
           MARRKAKKTVKKS+PS   +AKDE  N      DEDVERHAAAIRAIRDVEI RLIT LR
Sbjct: 3   MARRKAKKTVKKSSPSSGRDAKDEAVNKLKTDSDEDVERHAAAIRAIRDVEIERLITVLR 62

Query: 61  LLRSYFNKEQLQTPLLQFFEEKLPRLSISRTGEQGEIEVQWKDTEDELRTNPADGIDIHA 120
           LLRSYFNKEQLQTPLLQFFEEKLP LSIS  G+QGEIEV+WKDTEDEL TNPADG+DIHA
Sbjct: 63  LLRSYFNKEQLQTPLLQFFEEKLPSLSISIRGKQGEIEVRWKDTEDELHTNPADGVDIHA 122

Query: 121 SLLHRLSIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNFDLEEPSDNMVLGMPD 180
           SLLHRLS AYP CSAGMRSFNGFEFSSKSVKTNPF  ENLQIPNF LEEPSD+M LGMPD
Sbjct: 123 SLLHRLSTAYPYCSAGMRSFNGFEFSSKSVKTNPFNAENLQIPNFVLEEPSDDMTLGMPD 182

Query: 181 ILQTPGV-----INQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESEEG 230
           I+QTPGV      NQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESEEG
Sbjct: 183 IVQTPGVRIFMISNQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESEEG 242

[Close]

BLAST of MELO3C007790.2 vs. TrEMBL
Match: tr|A0A2I4G2J2|A0A2I4G2J2_9ROSI (uncharacterized protein LOC109004133 isoform X2 OS=Juglans regia OX=51240 GN=LOC109004133 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 2.8e-69
Identity = 151/241 (62.66%), Postives = 178/241 (73.86%), Query Frame = 0


Query: 1   MARRKAKKTVKKSNPSPV--------LEA---KDETA-NDEDVERHAAAIRAIRDVEIGR 60
           MARR+AKKTV KS  SP+         EA   KDE A  D+++ER ++AIRAIRDVEI  
Sbjct: 1   MARRRAKKTVNKSASSPLNGGNGAVATEAQIEKDEVAFTDQEIERQSSAIRAIRDVEIEH 60

Query: 61  LITELRLLRSYFNKEQLQTPLLQFFEEKLPRLSISRTGEQGEIEVQWKDTEDELRTNPAD 120
           L+TELRLLRSYF+KEQLQ+P LQFF+E LP LS+       + EVQW      L  NP D
Sbjct: 61  LLTELRLLRSYFSKEQLQSPALQFFKENLPNLSVVGNEGNRQFEVQWNYENSNLYMNPND 120

Query: 121 GIDIHASLLHRLSIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNFDLEEPSDNM 180
           GID+HAS+L RLS+ YP+CS    S  G EFSSK+VKT+   V NLQI +F   EPS+  
Sbjct: 121 GIDLHASILRRLSMVYPDCSGATASLRGVEFSSKAVKTSLLGVGNLQIGDF---EPSETQ 180

Query: 181 VLGMPDILQTPGVINQRLSIGMTPKTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESEE 230
           +LGM D L+TPGV +QRLS+GMTPKTRRLPKPGEML+S+HGSPLGVYKEDNMEAIHESEE
Sbjct: 181 MLGMQDGLRTPGVSSQRLSVGMTPKTRRLPKPGEMLLSVHGSPLGVYKEDNMEAIHESEE 238

The following BLAST results are available for this feature:

BLAST of MELO3C007790.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008440665.1	8.8e-123	100.00	PREDICTED: uncharacterized protein LOC103485008 [Cucumis melo]	[more]
XP_004143493.1	7.2e-117	96.07	PREDICTED: uncharacterized protein LOC101215210 [Cucumis sativus] >KGN48787.1 hy...	[more]
XP_023543921.1	1.2e-108	87.14	uncharacterized protein LOC111803645 [Cucurbita pepo subsp. pepo]	[more]
XP_016900279.1	4.0e-107	88.51	PREDICTED: uncharacterized protein LOC103489436 [Cucumis melo]	[more]
XP_022978547.1	7.5e-106	85.83	uncharacterized protein LOC111478496 [Cucurbita maxima]	[more]

BLAST of MELO3C007790.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G39630.1	9.0e-37	42.24	unknown protein	[more]

BLAST of MELO3C007790.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of MELO3C007790.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B1M1\|A0A1S3B1M1_CUCME	5.8e-123	100.00	uncharacterized protein LOC103485008 OS=Cucumis melo OX=3656 GN=LOC103485008 PE=...	[more]
tr\|A0A0A0KK81\|A0A0A0KK81_CUCSA	4.8e-117	96.07	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G501280 PE=4 SV=1	[more]
tr\|A0A1S4DWB9\|A0A1S4DWB9_CUCME	2.6e-107	88.51	uncharacterized protein LOC103489436 OS=Cucumis melo OX=3656 GN=LOC103489436 PE=...	[more]
tr\|A0A0A0KRH4\|A0A0A0KRH4_CUCSA	3.9e-103	85.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G622550 PE=4 SV=1	[more]
tr\|A0A2I4G2J2\|A0A2I4G2J2_9ROSI	2.8e-69	62.66	uncharacterized protein LOC109004133 isoform X2 OS=Juglans regia OX=51240 GN=LOC...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006413	translational initiation
biological_process	GO:0044271	cellular nitrogen compound biosynthetic process
biological_process	GO:0019219	regulation of nucleobase-containing compound metabolic process
biological_process	GO:2000112	regulation of cellular macromolecule biosynthetic process
biological_process	GO:0090304	nucleic acid metabolic process
biological_process	GO:0016458	gene silencing
biological_process	GO:0016569	chromatin modification
biological_process	GO:0044267	cellular protein metabolic process
biological_process	GO:0008150	biological_process
biological_process	GO:0044767	single-organism developmental process
biological_process	GO:1903047	mitotic cell cycle process
biological_process	GO:0034968	histone lysine methylation
biological_process	GO:0006342	chromatin silencing
biological_process	GO:0048856	anatomical structure development
biological_process	GO:1902589	single-organism organelle organization
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003743	translation initiation factor activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C007790.2.1	MELO3C007790.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..28
None	No IPR available	PANTHER	PTHR37248	FAMILY NOT NAMED	coord: 1..229

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C007790.2	Csa6G501280	Cucumber (Chinese Long) v2	cumedB483
MELO3C007790.2	CSPI06G30600	Wild cucumber (PI 183967)	cpimedB493
MELO3C007790.2	Cucsa.104730	Cucumber (Gy14) v1	cgymedB131
MELO3C007790.2	CmaCh03G007840	Cucurbita maxima (Rimu)	cmamedB703
MELO3C007790.2	CmaCh07G005150	Cucurbita maxima (Rimu)	cmamedB907
MELO3C007790.2	CmoCh07G005100	Cucurbita moschata (Rifu)	cmomedB896
MELO3C007790.2	CmoCh03G008180	Cucurbita moschata (Rifu)	cmomedB694
MELO3C007790.2	Lsi01G007240	Bottle gourd (USVL1VR-Ls)	lsimedB163
MELO3C007790.2	Cp4.1LG19g09490	Cucurbita pepo (Zucchini)	cpemedB531
MELO3C007790.2	Cp4.1LG10g01060	Cucurbita pepo (Zucchini)	cpemedB080
MELO3C007790.2	CsGy6G030060	Cucumber (Gy14) v2	cgybmedB440
MELO3C007790.2	Cla014177	Watermelon (97103) v1	medwmB559
MELO3C007790.2	ClCG01G019130	Watermelon (Charleston Gray)	medwcgB509
MELO3C007790.2	Cla97C01G018600	Watermelon (97103) v2	medwmbB505
MELO3C007790.2	Bhi03G000953	Wax gourd	medwgoB642
MELO3C007790.2	Carg16025	Silver-seed gourd	carmedB0766
MELO3C007790.2	Carg00669	Silver-seed gourd	carmedB0418
MELO3C007790.2	CsaV3_6G045820	Cucumber (Chinese Long) v3	cucmedB505

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None