Cp4.1LG10g01060 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG10g01060
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Translation initiation factor IF-2, putative isoform 1
Location	Cp4.1LG10 : 3399821 .. 3407604 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAACACTAGACAACCGTTCGATATAAAGGTAGAATAAATGTAGGCGTGCTGTGATTCAAATTGTAAAAGTTCAAAGGAAAAACATGTAAGTTAGTTAAGAATTTAGAGATGAACCATGAAAATCCATGGTAGCTATCTTTTGAGATGAACCCACTACTGGTTTCAGCAATGGATGTTCTGCAGTCAAGGTAGGATTTATGTTGTATGGCTGATTTAGGCAGATTTCTAAAATGAAACCAAACTTTCAAAAGAGCAACAGAGGAAGAACGTACCTGGTTTTCTCATGCTTGGTGTGTGTGTTTTTGTCATATCAACCAGTATTCTTTTGTGGATGAAATCTCTAAATGATTACGCCTACCAATAGTCCCGACAAGAACAGGCGCCATCCTTAAAATGGTGAAATCGAGTAGCATCTCTCACAATGATTTCCCTTCCTACAAGCTTGGAGATGAACTTTATAGCAGAATGGCAGTCATTACAAACTCTAAGGTTCTTCATAATCCTCAGCACAGTGTTCTCTGGTGTACTCAGAAGACCAAATGCTATAGCAAGTTTCTCACTATGATATCTAAGAATCTGCTCCTTCACCTCTTCTTCAAGGTCATGAAGCACTGATTCAGTGTCAGGGATGAACCCCATCTTTTTTATGTCCTCCCAAATCTCATCCATCAACTTATAGATTTCATCTTTCTGTGGATGAATCACGTCTTCAACTCCAAATGCATGAACTTTGTTCTTAATATGAATCCAACTAAATCCTTTATCTTTCTTCACTCCTCTATCCTTCATCAGCTTTCTAGTTTTGGCAGCGTTTTCCCATTTCCCGCAAGCTGAATATACATTAGCAAGAGCTGAGTATGCGCCGCTGTTTCCAGGATCAATATGAAGCAGTCTTTCCGCTGCAACTTTCGCCAAATCTGCATTTTTATGGATCTTACAAGATGCTAGTAGCGATCCCCAAGCTATATTATCTGGCTCTATAGGCATGCTTTCAATGAATTGGTATGCTTCTTGAAGCAATCCAGCTCGTCCATAAAGATCGATCATACATGCATAATGACTTAGAGTAGGTTCAATTTTATGTACTTCAGTCATCAGATTATAGTAATTTCGACCTTGTTCTATTAATCCCACGTGTGTACAAGCAGACAGCACTCCTACATAAGTGATATGGTCAGGTTTCATACCAACTGAGAGCATCCTCTCAAACAGGCTGATGGCTTCTTCTCCAAAGCCATGCTGCGCCAGAGCCATGATCATTGATGTCCAGGACACAGTTTCCTTCTTCCCGCTGGTAAGATCAAAAACTCTTTTGGCTATATTGATGCTTCCTGCTTTAGCATACATGGCTATCAAGGCATTAGTAACAGAAGCTGTTGAAGATTCTCCTGCTTTTATGGCTCTGGCATGGATTTGTTTTCCATGCTCCAAACTAGCCAAACTTGAACTTACACTCAGCATGCTCGCCAGGGTATAACTATTCGGCTCAGGGCCTTCGTTAACCATCGACCGAAACAGTTCCAGCGCTTCATTCCATAACCCGTTTTGCACATAACCAACAATCATGGCTGTCCATGCTATCACATCACGATCTCTTAATTTGTTAAATATCTCTCTGGCTGGTTTAACATCTCCAAGCTTGGTATAACCATCCAGTAGGGAAGTAAACGCTATAATGTTTAGATTTGAAGTCCTGTTATGCTCAATAATCAGTCTAGCTATTTCTACCCCACCTGACTTTGCATACATTGATATCAAAGCATTGCCAACTGCTTCAGAAGTTTCAGTTTCTGTTCTTAGAATATAAGCATGTATCTGTTTTCCAATATTCAGCTTCTCAAGATTGGCACAAGCTGATAAAACGCTTGCCAAGGTGAACTTATCTGGCTTTAAAGAAGATTCAAACAACATCTTCGAGAAGATATTCAGTGCTTCAAGATCATACCCTATCTGATTATAACCTGAAATCATCGAATTCCAAGAAACTATATCTCGGTCAGGCATTTTCTCGAACTGTGAAGCAGCAAGGTTAATCTGCCCAGATTGCATGTACAATGAAATCAAAGCATTCCACGTTGAAATGTTCTTCAGCGTCATCCTATCAAAAACAACTTTCGCTATAACCGGATCTCCACATTTTGCGTACATATTCAGCAGGGAAGTTGCAACAGAAGCGTGGCTGCCAAGTCCGAGTTTGACAACAAATGAATGAATCTTCCTACCAATGTCCAAAGCTTGATTTGCCGCGCAGGAAGAAAGAACATTACTGACCGTGAATTGAGAAGGCGGGACTCTCTCGGATATCATCTTCGCAAACATTCCAATCGCATTATCAAATAGACCCAATTGATTGTAACCCACGATGATCGCAGTCCAAGAAACGGGGTCGCAATCAGGCATTTCATACAGAAGGCGACGCGACGCATCGAAATTGCCCTGTTTAGCATACGCAGAGATCAAAGTGTTCCATGAGAATGTTGACTTAATGGGCATTTCATCGAACACATGGTGGGCATCCCTAACTGACCCAGTTTTAGCATAGAAGGTCATAAGATTATTTATCAAGTACACGCCAAGATGAAGGCCTTTCTTGATTATTTGAGAGTGAACTGACCTTCCGGCAAATGGGTCTCTGATTCTGACGCTTGTTTGCAGGATATGTGCAAAGAAGTCAGAAGAAGTGGGTGCATGAGCAACTTCCATAATTGAAGATTAATCCAGAGACGAAAAACAATCCCAGTGTTTAACCTCGCCATGAATTTATAGCCATCAATTTCAAAAGATAGCCAAATTGGTGGGAGACCGAGGCTCAGGTGCTTTGCTTTCGAAGCTACTGAGGATGCGTGCCAAAATGAGCGAAATGGTGTGGCGTAGCCACTGCCTGGTCTGAGTCGAATGACGCTTGGTTTAAAAAGTTTAAGAAAGACTTAAATATTCTCCCATTTTAGCCCCACTTTCTGGGCTCAACGGCCCATTTTAGGCACATCTGTAATATCCAACCCGCGCCATTCTCTTACCGTCCGCGGCATTATTCAGTTTCAAACTAGCTTCTTTCCCCGCCCAATCTTCCCCGCATCTTAACACTGCCCCTCCGCCGGAGCTGAAAAGGAGGAGAGAGAGATTTCGCAGCAGTTCACCGGCGAAGTTTAATCCATTCATTCCTGTCTCCGGTAGTTAGATTTCCTGAAGTCTTGGAAACCAATTGTTAGAAATTCAGGTTATTGACTTTCATTTGTGTTTATTTATGCCATTACCACTACGAACTTCAATTAATTACACTATGCACAACATTTAGGGTTTGAAAGTCTTTGTATTATTTTCATTTATGAAAATCTAGTGACAAATTGCGGATTCGTTTGAGAATGCTGCAACGTGAGTAGTCCAGTAAAGCCTAGAAAGACTGGTTGCTGAAATGGCAAGGCGAAAGGCGAAGAAGTCAGTTAAGAAGTCCAGCCCTTCACCTGTTCGAGAAGCAAAGGATGGATCAGCGAATGAGCTAAAAAGTGAGGATCAAGCATCATTGGTGTCCGACGAGGATGGTATGTTGAAATTCGCAGTAATTCCGATTCTTTTTCCGGAAGCCGGAACTTGATTTAAGGAAGAAAAAATTTTCTGTTAAAATTGTCCGAGGATTTAACATAATTGTTGCGCTGCTTTCGCCATTGTTTATGTTTAGTTGAACGGCATGCTACTGCAATCCGTGCGATTCGGGATGTGGAAATCGAGCGTTTGATTACTGAATTGCGGTTGCTGCGTTCGTATTTCAACAAAGAGCAATTGCAAACTCCTCTATTGCAATTTTTCGAAGAAAAACTTCCAAGCTTGTCCATTTCAAGACGAGGCGAACAAGGAGAAATTGAAGTGCAATGGAAGAATACAGAGGATGAATTACACACTAATCCAGCTGATGGAATAGATATACATGCTTCTCTCCTGCATCGCCTGTCCACAGCTTACCCTAACTGTTCTGCCGGAATGCGATCTTTTAATGGATTTGAATTTTCCAGTAAATCAGGTATCTGTAGATTTTGGATTTTGGATTTTGATGCGTAAAACTAATTGGTAAGTACACCTTTATGTGATGTTTCATTGCTGTAACTCATCTTCTTTCTCTACTGGTGGCAGTGAAAACAAATCCTTTCAATGTTGAGAACCTGCAAATTCCAAACTTCGTAAGTAATTTTACATTTGATATCTTAAATGTTTGCTAGAAATTCTTAAATTTAGACCTGTAGAATGAGTGATACCTTGTGAGCTCACAAAGTATGATTTAGTTTGTCTATATCTTTTGTTTCATGTCATTGTTTTGTGGAAGAATGCCTTACTCGTCTTCACGAGAAATAAAACCGTGTACGCTTTGGTATTGACTGATATATTTATTGACAATTCTTGCTTTCTAGGCTTTGGAGGAACCCTCAGATAACATGGTGCTTGGCATGCCAGACCTTCTCCAAACTCCTGGGGTTCGTATCTTCATGGTTTTTGAACATCGCTTATTAAGTTAGCCGTTTCATGTTAATATTCTATGATTGTCTGTTATGCCATTTTTTCAATATTTGGTGGTTCTCGACTCAAATTATTTAGGCACATATACGTTCCGGGTCAAAGGAATAGAATTACTGTAGTGGTAGCGTGTCTGCAATCAATTATTGATGTTTTGTTTCAAATAATTAAGGGCGTCTAAGCGAACTTGTGTGTATAAACTAATTATAAACAATTATCTAGCTTAATATTGAACTTCAATAAGTTTGGATACACGATGTCTTTGTCTTGGTAATGAGTTGGAATCTTGTTGCTGACCATCGGTTAGACTAGACTTTGTGGCTAACAAGGTCCACTATATAAATAGTGTAAACGGCTTAGAGAAAATGAGTTCAACACATAGTGGCCATCTTAGCTACGTAAGATTTAATATCCTGCAAGTATTTTTGATAGCCAATTATAATAGGTTCAGACGATTTTCCTGTTAGGTATAGTTGAAGCTCACAAACTCACCTCGATAAGATTTGTACTTTGTATACTCCGGTAAATTGTAAATGATCTTTATTACTGGTATTGGTTTTACAAAAGAATGCTATTTGAAAATACTAGTCATGGAACGTTGGATTATAGCTGAGTCTTCAGTGGTAATGTTCCTATGGATATCAATACCATGATAAAGGTTGTTCATATTCTTAAATGTACTCTGCTATCATCTGATCAAAGTTATCAACTGGAGGTGAAAAATCAATTGCAGGACAAGGATACAAAAAAGGTTATTGGGAGGCAATAATTGATAATTACTCATTGAAGTATAATTTTGTACGTAACAATAAATCACTACAGTGTGATTCGATTGCAAAGGGATTGATGGAAGTGCTGGTCTCATTTCAAGTTATTATTGCCATTACAAGTTTTAGTTATAGATTAAAAAAAAAATAATAAAAAAAAAATATATATATATATATTGACGCATTGAAATTTAGAAAAAGCGAGGAAAATCTTGATCCCATGGAAGGAAGCTGCAAAGATGAATTCCTAGTACAAAGATTAGTAAGGCTGTAGTTAAAAAACATGGTCTACATTTGGTAACGTTGTTTGGGGAATTGTTTCAGTAAAGTTTTCTATCTTTTTAGGAAAAGAATAATGTGTTTAGTTAACTGTTTCTTAAGTCTGGTTTGCCTTTCTTTTAGTGTATTCTACAATAAGCTAACTAATTCTCGTTCTGTAGGTAAGTAACCAAAGATTGTCTATTGGAATGACGCCAAAAACCCGAAGGCTGCCAAAGCCGGGGGAGGTGCTTGTATCTATCCATGGATCCCCGCTTGGCGTTTACAGGGAAGAAAACATGGAAGCAATCCATGGTATGTACAATTTGGAAATGTTAACGAGTAGGCCAAATAAGTTGGTGGGTAGATATGTTTATCATGCTTCTAAATTTTTCTAATAGACAAATTAATGTGCAGAATCAGAAGAGGGTTGATTTGCTGATTCAAGGCCACTTGACTGCTTGTCAATTAAAAAACTTCAAATGCAATCGTCCTGAGCATCGTTCCACCGGTCGTTCTATCAACCTACTTGCCATGTATCTACCCTTTTGATTACTGCTTATTAAAAGCTACTCCTTGTGTATAACTAAAAATTTGAGTGCTTTTACTCGAGGGAACGAGCATGAACAAACGCACAATATCTCCACTAGATTTTTGTGTGTGAATATTTGTTGTGAACCTTGATGTTGATATTGATCAAAGGTGAATCAAAGGCTAAATCAGCTTTTACTCCATTAATTTCCCTCCAGAATACGTTGAGAATCTTGCATCGCAAATTTATCATCACTCTTGACTGGTCTTTATTTCCAGACATTTTCTGTGATCACTGAAACAGTTTCAAATAGCTTATGAAGCAAAAAAATGGATCAGATGGGTGAGAAGGCTCCCTGATGATCACTGAATTAATTTATATATCCCGATTTTATGAGATAAGAAATGAGCATATATACAAAATTTTGACTTCTTGTTAACACTCCACATTCCTGTATCTTTCTTTGAACTGCAGCACCTTTCTCCAATGGGGGAAGTCAAGAAGCTCCTTATGAATGAAGACCGACTACAAAACTTCTTAAGCTAAGCCCAACTCTGGAGCATGGTTTTTCACACTACTTTCCAATTTTCTTGAACCTCTTCTATTTCTTGAAGATATTGGTTTTTCCACACTACTTTCTGAGTGTCTTGAACCTGTTCCAGTTCTTGCAGGTTCTGGTTTTTCTGGTGAAGATCCAACAGTTCCCAAAGCATCGAGGAAGAATCTCTTATTTGGAATGATGCCAGCTTTGTCCATGTTCTTCAAGAGCTTCTCCACAAGTTCCTTCGCATCAGCTTTGGTGTAAGCTTTATACAAAAGCTTGTATGTTGTTGAATCTGGAAACACCTTCATACTACTCGCACTCTCGAAAAGCAAATCGGCTTCCATGGGCAAACCATTCATGCAGTAAACATCAAGCATGGCGTTGAGGGTCGAGACTCTCACTGCCTTCCCAGAATTAACCATTCCATCAAAGATTTCTCTAGCCTTAGAAACACAGTCACAGTGACCATACATCATGATTAGACTTTCACAAGTGACATAGCTTGGATCATATCCCATATCCTTCATCTTCCTAAAAACTTCTTCAGCTCTCTCTCTAAGTCGTGCCTTCCCGTAGTTTGTGATCATCGAATTGAATGTAGGTAGCGTCGGCCTCTCCTTCGATCGTAATAAACTCTTGAACACCTGTTCCATCTTGTCAAATAGCTGTTTCTTCCCATATGAATCAATCAACAAGTTAAAGGATATGATATCTGGTTTGATTTCATTACTTTTCATGCGAGCAAGCATCGTTTCCATCTCTTTGATCATCCCATTTTTCCCATATGCATCCATCACTCCATTATATGTGTATATATCAGCTGAAACAATGCTCTCATCAAGATCTTTAAACAAGGCATTAACTTGATCCACTTTTCCAGCTTGAGCAAAAGCTCTGGTAAGAATGTTGTAAGTAACAACATTTGGCTTACACCGTTCCATTCCCTTCATCTTCTCAAAGTACCAAAGGACTTTAACCAAAGCCTTGGCTTTGTCCTTAGAATGAAGGTGCGCTGTGATAAGTGCATTGTAGACAGAAGTATCAGGTCGACACCCACTATTTCGCATCTCAGAAAAGAGCCATATAGCCATCCGAATTTGGCCCTTCTTTCCCATAATAGATATCAGTTTAGAATAAACCCCATTGTCAGCAATATACCAGCGCTGTTTCTGCATCCAT

mRNA sequence

AGAACACTAGACAACCGTTCGATATAAAGGTAGAATAAATGTAGGCGTGCTGTGATTCAAATTGTAAAAGTTCAAAGGAAAAACATGTAAGTTAGTTAAGAATTTAGAGATGAACCATGAAAATCCATGGTAGCTATCTTTTGAGATGAACCCACTACTGGTTTCAGCAATGGATGTTCTGCAGTCAAGGTAGGATTTATGTTGTATGGCTGATTTAGGCAGATTTCTAAAATGAAACCAAACTTTCAAAAGAGCAACAGAGGAAGAACGTACCTGGTTTTCTCATGCTTGGTGTGTGTGTTTTTGTCATATCAACCAGTATTCTTTTGTGGATGAAATCTCTAAATGATTACGCCTACCAATAGTCCCGACAAGAACAGGCGCCATCCTTAAAATGGTGAAATCGAGTAGCATCTCTCACAATGATTTCCCTTCCTACAAGCTTGGAGATGAACTTTATAGCAGAATGGCAGTCATTACAAACTCTAAGGTTCTTCATAATCCTCAGCACAGTGTTCTCTGGTGTACTCAGAAGACCAAATGCTATAGCAAGTTTCTCACTATGATATCTAAGAATCTGCTCCTTCACCTCTTCTTCAAGGTCATGAAGCACTGATTCAGTGTCAGGGATGAACCCCATCTTTTTTATGTCCTCCCAAATCTCATCCATCAACTTATAGATTTCATCTTTCTGTGGATGAATCACGTCTTCAACTCCAAATGCATGAACTTTGTTCTTAATATGAATCCAACTAAATCCTTTATCTTTCTTCACTCCTCTATCCTTCATCAGCTTTCTAGTTTTGGCAGCGTTTTCCCATTTCCCGCAAGCTGAATATACATTAGCAAGAGCTGAGTATGCGCCGCTGTTTCCAGGATCAATATGAAGCAGTCTTTCCGCTGCAACTTTCGCCAAATCTGCATTTTTATGGATCTTACAAGATGCTAGTAGCGATCCCCAAGCTATATTATCTGGCTCTATAGGCATGCTTTCAATGAATTGGTATGCTTCTTGAAGCAATCCAGCTCGTCCATAAAGATCGATCATACATGCATAATGACTTAGAGTAGGTTCAATTTTATGTACTTCAGTCATCAGATTATAGTAATTTCGACCTTGTTCTATTAATCCCACGTGTGTACAAGCAGACAGCACTCCTACATAAGTGATATGGTCAGGTTTCATACCAACTGAGAGCATCCTCTCAAACAGGCTGATGGCTTCTTCTCCAAAGCCATGCTGCGCCAGAGCCATGATCATTGATGTCCAGGACACAGTTTCCTTCTTCCCGCTGGTAAGATCAAAAACTCTTTTGGCTATATTGATGCTTCCTGCTTTAGCATACATGGCTATCAAGGCATTAGTAACAGAAGCTGTTGAAGATTCTCCTGCTTTTATGGCTCTGGCATGGATTTGTTTTCCATGCTCCAAACTAGCCAAACTTGAACTTACACTCAGCATGCTCGCCAGGGTATAACTATTCGGCTCAGGGCCTTCGTTAACCATCGACCGAAACAGTTCCAGCGCTTCATTCCATAACCCGTTTTGCACATAACCAACAATCATGGCTGTCCATGCTATCACATCACGATCTCTTAATTTGTTAAATATCTCTCTGGCTGGTTTAACATCTCCAAGCTTGGTATAACCATCCAGTAGGGAAGTAAACGCTATAATGTTTAGATTTGAAGTCCTGTTATGCTCAATAATCAGTCTAGCTATTTCTACCCCACCTGACTTTGCATACATTGATATCAAAGCATTGCCAACTGCTTCAGAAGTTTCAGTTTCTGTTCTTAGAATATAAGCATGTATCTGTTTTCCAATATTCAGCTTCTCAAGATTGGCACAAGCTGATAAAACGCTTGCCAAGGTGAACTTATCTGGCTTTAAAGAAGATTCAAACAACATCTTCGAGAAGATATTCAGTGCTTCAAGATCATACCCTATCTGATTATAACCTGAAATCATCGAATTCCAAGAAACTATATCTCGGTCAGGCATTTTCTCGAACTGTGAAGCAGCAAGGTTAATCTGCCCAGATTGCATGTACAATGAAATCAAAGCATTCCACGTTGAAATGTTCTTCAGCGTCATCCTATCAAAAACAACTTTCGCTATAACCGGATCTCCACATTTTGCGTACATATTCAGCAGGGAAGTTGCAACAGAAGCGTGGCTGCCAAGTCCGAGTTTGACAACAAATGAATGAATCTTCCTACCAATGTCCAAAGCTTGATTTGCCGCGCAGGAAGAAAGAACATTACTGACCGTGAATTGAGAAGGCGGGACTCTCTCGGATATCATCTTCGCAAACATTCCAATCGCATTATCAAATAGACCCAATTGATTGTAACCCACGATGATCGCAGTCCAAGAAACGGGGTCGCAATCAGGCATTTCATACAGAAGGCGACGCGACGCATCGAAATTGCCCTGTTTAGCATACGCAGAGATCAAAGTGTTCCATGAGAATGTTGACTTAATGGGCATTTCATCGAACACATGGTGGGCATCCCTAACTGACCCAGTTTTAGCATAGAAGGTCATAAGATTATTTATCAAGTACACGCCAAGATGAAGGCCTTTCTTGATTATTTGAGAGTGAACTGACCTTCCGGCAAATGGGTCTCTGATTCTGACGCTTGTTTGCAGGATATGTGCAAAGAAGTCAGAAGAAGTGGGTGCATGAGCAACTTCCATAATTGAAGATTAATCCAGAGACGAAAAACAATCCCAGTGTTTAACCTCGCCATGAATTTATAGCCATCAATTTCAAAAGATAGCCAAATTGGTGGGAGACCGAGGCTCAGGTGCTTTGCTTTCGAAGCTACTGAGGATGCGTGCCAAAATGAGCGAAATGGTGTGGCGTAGCCACTGCCTGGTCTGAGTCGAATGACGCTTGGTTTAAAAAGTTTAAGAAAGACTTAAATATTCTCCCATTTTAGCCCCACTTTCTGGGCTCAACGGCCCATTTTAGGCACATCTGTAATATCCAACCCGCGCCATTCTCTTACCGTCCGCGGCATTATTCAGTTTCAAACTAGCTTCTTTCCCCGCCCAATCTTCCCCGCATCTTAACACTGCCCCTCCGCCGGAGCTGAAAAGGAGGAGAGAGAGATTTCGCAGCAGTTCACCGGCGAAGTTTAATCCATTCATTCCTGTCTCCGGTAGTTAGATTTCCTGAAGTCTTGGAAACCAATTGTTAGAAATTCAGTGACAAATTGCGGATTCGTTTGAGAATGCTGCAACGTGAGTAGTCCAGTAAAGCCTAGAAAGACTGGTTGCTGAAATGGCAAGGCGAAAGGCGAAGAAGTCAGTTAAGAAGTCCAGCCCTTCACCTGTTCGAGAAGCAAAGGATGGATCAGCGAATGAGCTAAAAAGTGAGGATCAAGCATCATTGGTGTCCGACGAGGATGTTGAACGGCATGCTACTGCAATCCGTGCGATTCGGGATGTGGAAATCGAGCGTTTGATTACTGAATTGCGGTTGCTGCGTTCGTATTTCAACAAAGAGCAATTGCAAACTCCTCTATTGCAATTTTTCGAAGAAAAACTTCCAAGCTTGTCCATTTCAAGACGAGGCGAACAAGGAGAAATTGAAGTGCAATGGAAGAATACAGAGGATGAATTACACACTAATCCAGCTGATGGAATAGATATACATGCTTCTCTCCTGCATCGCCTGTCCACAGCTTACCCTAACTGTTCTGCCGGAATGCGATCTTTTAATGGATTTGAATTTTCCAGTAAATCAGTGAAAACAAATCCTTTCAATGTTGAGAACCTGCAAATTCCAAACTTCGCTTTGGAGGAACCCTCAGATAACATGGTGCTTGGCATGCCAGACCTTCTCCAAACTCCTGGGGTTCGTATCTTCATGGTTGTTCATATTCTTAAATGTACTCTGCTATCATCTGATCAAAGTTATCAACTGGAGGTGAAAAATCAATTGCAGGACAAGGATACAAAAAAGGTAAGTAACCAAAGATTGTCTATTGGAATGACGCCAAAAACCCGAAGGCTGCCAAAGCCGGGGGAGGTGCTTGTATCTATCCATGGATCCCCGCTTGGCGTTTACAGGGAAGAAAACATGGAAGCAATCCATGAATCAGAAGAGGGTTGATTTGCTGATTCAAGGCCACTTGACTGCTTGTCAATTAAAAAACTTCAAATGCAATCGTCCTGAGCATCGTTCCACCGGTCGTTCTATCAACCTACTTGCCATGTATCTACCCTTTTGATTACTGCTTATTAAAAGCTACTCCTTGTGTATAACTAAAAATTTGAGTGCTTTTACTCGAGGGAACGAGCATGAACAAACGCACAATATCTCCACTAGATTTTTGTGTGTGAATATTTGTTGTGAACCTTGATGTTGATATTGATCAAAGGTGAATCAAAGGCTAAATCAGCTTTTACTCCATTAATTTCCCTCCAGAATACGTTGAGAATCTTGCATCGCAAATTTATCATCACTCTTGACTGGTCTTTATTTCCAGACATTTTCTGTGATCACTGAAACAGTTTCAAATAGCTTATGAAGCAAAAAAATGGATCAGATGGGTGAGAAGGCTCCCTGATGATCACTGAATTAATTTATATATCCCGATTTTATGAGATAAGAAATGAGCATATATACAAAATTTTGACTTCTTGTTAACACTCCACATTCCTGTATCTTTCTTTGAACTGCAGCACCTTTCTCCAATGGGGGAAGTCAAGAAGCTCCTTATGAATGAAGACCGACTACAAAACTTCTTAAGCTAAGCCCAACTCTGGAGCATGGTTTTTCACACTACTTTCCAATTTTCTTGAACCTCTTCTATTTCTTGAAGATATTGGTTTTTCCACACTACTTTCTGAGTGTCTTGAACCTGTTCCAGTTCTTGCAGGTTCTGGTTTTTCTGGTGAAGATCCAACAGTTCCCAAAGCATCGAGGAAGAATCTCTTATTTGGAATGATGCCAGCTTTGTCCATGTTCTTCAAGAGCTTCTCCACAAGTTCCTTCGCATCAGCTTTGGTGTAAGCTTTATACAAAAGCTTGTATGTTGTTGAATCTGGAAACACCTTCATACTACTCGCACTCTCGAAAAGCAAATCGGCTTCCATGGGCAAACCATTCATGCAGTAAACATCAAGCATGGCGTTGAGGGTCGAGACTCTCACTGCCTTCCCAGAATTAACCATTCCATCAAAGATTTCTCTAGCCTTAGAAACACAGTCACAGTGACCATACATCATGATTAGACTTTCACAAGTGACATAGCTTGGATCATATCCCATATCCTTCATCTTCCTAAAAACTTCTTCAGCTCTCTCTCTAAGTCGTGCCTTCCCGTAGTTTGTGATCATCGAATTGAATGTAGGTAGCGTCGGCCTCTCCTTCGATCGTAATAAACTCTTGAACACCTGTTCCATCTTGTCAAATAGCTGTTTCTTCCCATATGAATCAATCAACAAGTTAAAGGATATGATATCTGGTTTGATTTCATTACTTTTCATGCGAGCAAGCATCGTTTCCATCTCTTTGATCATCCCATTTTTCCCATATGCATCCATCACTCCATTATATGTGTATATATCAGCTGAAACAATGCTCTCATCAAGATCTTTAAACAAGGCATTAACTTGATCCACTTTTCCAGCTTGAGCAAAAGCTCTGGTAAGAATGTTGTAAGTAACAACATTTGGCTTACACCGTTCCATTCCCTTCATCTTCTCAAAGTACCAAAGGACTTTAACCAAAGCCTTGGCTTTGTCCTTAGAATGAAGGTGCGCTGTGATAAGTGCATTGTAGACAGAAGTATCAGGTCGACACCCACTATTTCGCATCTCAGAAAAGAGCCATATAGCCATCCGAATTTGGCCCTTCTTTCCCATAATAGATATCAGTTTAGAATAAACCCCATTGTCAGCAATATACCAGCGCTGTTTCTGCATCCAT

Coding sequence (CDS)

ATGGCAAGGCGAAAGGCGAAGAAGTCAGTTAAGAAGTCCAGCCCTTCACCTGTTCGAGAAGCAAAGGATGGATCAGCGAATGAGCTAAAAAGTGAGGATCAAGCATCATTGGTGTCCGACGAGGATGTTGAACGGCATGCTACTGCAATCCGTGCGATTCGGGATGTGGAAATCGAGCGTTTGATTACTGAATTGCGGTTGCTGCGTTCGTATTTCAACAAAGAGCAATTGCAAACTCCTCTATTGCAATTTTTCGAAGAAAAACTTCCAAGCTTGTCCATTTCAAGACGAGGCGAACAAGGAGAAATTGAAGTGCAATGGAAGAATACAGAGGATGAATTACACACTAATCCAGCTGATGGAATAGATATACATGCTTCTCTCCTGCATCGCCTGTCCACAGCTTACCCTAACTGTTCTGCCGGAATGCGATCTTTTAATGGATTTGAATTTTCCAGTAAATCAGTGAAAACAAATCCTTTCAATGTTGAGAACCTGCAAATTCCAAACTTCGCTTTGGAGGAACCCTCAGATAACATGGTGCTTGGCATGCCAGACCTTCTCCAAACTCCTGGGGTTCGTATCTTCATGGTTGTTCATATTCTTAAATGTACTCTGCTATCATCTGATCAAAGTTATCAACTGGAGGTGAAAAATCAATTGCAGGACAAGGATACAAAAAAGGTAAGTAACCAAAGATTGTCTATTGGAATGACGCCAAAAACCCGAAGGCTGCCAAAGCCGGGGGAGGTGCTTGTATCTATCCATGGATCCCCGCTTGGCGTTTACAGGGAAGAAAACATGGAAGCAATCCATGAATCAGAAGAGGGTTGA

Protein sequence

MARRKAKKSVKKSSPSPVREAKDGSANELKSEDQASLVSDEDVERHATAIRAIRDVEIERLITELRLLRSYFNKEQLQTPLLQFFEEKLPSLSISRRGEQGEIEVQWKNTEDELHTNPADGIDIHASLLHRLSTAYPNCSAGMRSFNGFEFSSKSVKTNPFNVENLQIPNFALEEPSDNMVLGMPDLLQTPGVRIFMVVHILKCTLLSSDQSYQLEVKNQLQDKDTKKVSNQRLSIGMTPKTRRLPKPGEVLVSIHGSPLGVYREENMEAIHESEEG

Homology

[Close]

BLAST of Cp4.1LG10g01060 vs. TrEMBL
Match: A0A0A0KRH4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G622550 PE=4 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 1.9e-106
Identity = 212/277 (76.53%), Postives = 229/277 (82.67%), Query Frame = 1


Query: 1   MARRKAKKSVKKSSPSPVREAKDGSANELKSEDQASLVSDEDVERHATAIRAIRDVEIER 60
           MARRKAKK+VKKSSPS  R+AKD + N+LK++      SDEDVERHA AIRAIRDVEIER
Sbjct: 3   MARRKAKKTVKKSSPSSGRDAKDEAVNKLKTD------SDEDVERHAAAIRAIRDVEIER 62

Query: 61  LITELRLLRSYFNKEQLQTPLLQFFEEKLPSLSISRRGEQGEIEVQWKNTEDELHTNPAD 120
           LIT LRLLRSYFNKEQLQTPLLQFFEEKLPSLSIS RG+QGEIEV+WK+TEDELHTNPAD
Sbjct: 63  LITVLRLLRSYFNKEQLQTPLLQFFEEKLPSLSISIRGKQGEIEVRWKDTEDELHTNPAD 122

Query: 121 GIDIHASLLHRLSTAYPNCSAGMRSFNGFEFSSKSVKTNPFNVENLQIPNFALEEPSDNM 180
           G+DIHASLLHRLSTAYP CSAGMRSFNGFEFSSKSVKTNPFN ENLQIPNF LEEPSD+M
Sbjct: 123 GVDIHASLLHRLSTAYPYCSAGMRSFNGFEFSSKSVKTNPFNAENLQIPNFVLEEPSDDM 182

Query: 181 VLGMPDLLQTPGVRIFMVVHILKCTLLSSDQSYQLEVKNQLQDKDTKKVSNQRLSIGMTP 240
            LGMPD++QTPGVRIFM                               +SNQRLSIGMTP
Sbjct: 183 TLGMPDIVQTPGVRIFM-------------------------------ISNQRLSIGMTP 242

Query: 241 KTRRLPKPGEVLVSIHGSPLGVYREENMEAIHESEEG 278
           KTRRLPKPGE+LVSIHGSPLGVY+E+NMEAIHESEEG
Sbjct: 243 KTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESEEG 242

[Close]

BLAST of Cp4.1LG10g01060 vs. TrEMBL
Match: A0A0A0KK81_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G501280 PE=4 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 2.3e-83
Identity = 184/277 (66.43%), Postives = 199/277 (71.84%), Query Frame = 1


Query: 1   MARRKAKKSVKKSSPSPVREAKDGSANELKSEDQASLVSDEDVERHATAIRAIRDVEIER 60
           MARRKAKK+VKKSSPSP+ EAKD +AN            DEDVERHA AIRAIRDVEIER
Sbjct: 1   MARRKAKKTVKKSSPSPILEAKDEAAN------------DEDVERHAAAIRAIRDVEIER 60

Query: 61  LITELRLLRSYFNKEQLQTPLLQFFEEKLPSLSISRRGEQGEIEVQWKNTEDELHTNPAD 120
           LIT LRLLRSYFNKEQLQTPLLQFFEEKLP LSISR GEQGEIEVQWK+TEDEL TNPAD
Sbjct: 61  LITVLRLLRSYFNKEQLQTPLLQFFEEKLPRLSISRTGEQGEIEVQWKDTEDELRTNPAD 120

Query: 121 GIDIHASLLHRLSTAYPNCSAGMRSFNGFEFSSKSVKTNPFNVENLQIPNFALEEPSDNM 180
           GIDIHASLLHRLS AYPNCSAGMRSFNGFEFSSKSVKTNPF VENLQIPNF LEEPSDN+
Sbjct: 121 GIDIHASLLHRLSIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNFVLEEPSDNL 180

Query: 181 VLGMPDLLQTPGVRIFMVVHILKCTLLSSDQSYQLEVKNQLQDKDTKKVSNQRLSIGMTP 240
           VLGMPD+ QTPGV                  + +L +    + +   K     +SI  +P
Sbjct: 181 VLGMPDIHQTPGV-----------------SNQRLSIGMTPKTRRLPKPGEMLVSIHGSP 229

Query: 241 KTRRLPKPGEVLVSIHGSPLGVYREENMEAIHESEEG 278
                               GVY+E+NMEAIHESEEG
Sbjct: 241 L-------------------GVYKEDNMEAIHESEEG 229

[Close]

BLAST of Cp4.1LG10g01060 vs. TrEMBL
Match: M5VZV5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010712mg PE=4 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 2.5e-50
Identity = 127/277 (45.85%), Postives = 167/277 (60.29%), Query Frame = 1


Query: 1   MARRKAKKSVKKSSPSPVREAKDGSANELKSEDQASLVSDEDVERHATAIRAIRDVEIER 60
           MAR++AKK+VK+ + SP  +       E ++  Q +  +D DVER  +AIRAIRDVE E 
Sbjct: 1   MARKRAKKTVKQVALSPGTDFNVAEEKEPQNAKQEAQFTDPDVERQISAIRAIRDVETEH 60

Query: 61  LITELRLLRSYFNKEQLQTPLLQFFEEKLPSLSISRRGEQGEIEVQWKNTEDELHTNPAD 120
           L+T LRLLRSYFNKEQ +TP+LQ+F+E   +LSI R GE G++EVQW + +  +  N  D
Sbjct: 61  LLTNLRLLRSYFNKEQQRTPVLQYFKENFQNLSIVRNGENGQMEVQWIDKDGNVSMN--D 120

Query: 121 GIDIHASLLHRLSTAYPNCSAGMRSFNGFEFSSKSVKTNPFNVENLQIPNFALEEPSDNM 180
           G+D+H +LL RLS AY  CSA + S  GFEFSSK+ KT+    +NLQI +F LEEP D +
Sbjct: 121 GMDLHETLLRRLSIAYSGCSAAIPSLGGFEFSSKADKTSLLGADNLQISDFGLEEPFDTL 180

Query: 181 VLGMPDLLQTPGVRIFMVVHILKCTLLSSDQSYQLEVKNQLQDKDTKKVSNQRLSIGMTP 240
           +LG  D LQTPGV                  S +L +    + +   K            
Sbjct: 181 MLGKQDTLQTPGV-----------------SSQRLSIGMTPKTRRLPKPGEM-------- 239

Query: 241 KTRRLPKPGEVLVSIHGSPLGVYREENMEAIHESEEG 278
                      L+S+HGSPLGVY+E+NMEAIHESEEG
Sbjct: 241 -----------LLSVHGSPLGVYKEDNMEAIHESEEG 239

[Close]

BLAST of Cp4.1LG10g01060 vs. TrEMBL
Match: A0A0B0NLX1_GOSAR (Putative cytochrome P450 OS=Gossypium arboreum GN=F383_02081 PE=4 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 1.6e-49
Identity = 129/277 (46.57%), Postives = 169/277 (61.01%), Query Frame = 1


Query: 1   MARRKAKKSVKKSSPSPVREAKDGSANELKSEDQASLVSDEDVERHATAIRAIRDVEIER 60
           MA+R+AKK+VK+   S   E +     E ++E+    + D++VER   AIRA+RDVEIE 
Sbjct: 1   MAKRRAKKTVKEVPASAECEVERNDRKEGQNEENIPGLIDQEVERQCAAIRALRDVEIEH 60

Query: 61  LITELRLLRSYFNKEQLQTPLLQFFEEKLPSLSISRRGEQGEIEVQWKNTEDELHTNPAD 120
           ++T LRLLRSY N+EQLQTP LQFF + LP+LSI R  E G+ EVQWK+ +  +  + AD
Sbjct: 61  MLTALRLLRSYCNEEQLQTPALQFFNDNLPNLSIVRNAENGQFEVQWKHEDGNISIHGAD 120

Query: 121 GIDIHASLLHRLSTAYPNCSAGMRSFNGFEFSSKSVKTNPFNVENLQIPNFALEEPSDNM 180
           G D+HASLLHR+S  Y NC +                          IP+F+  E S   
Sbjct: 121 GRDVHASLLHRMSLVYANCPS--------------------------IPSFSGFELSTEA 180

Query: 181 VLGMPDLLQTPGVRIFMVVHILKCTLLSSDQSYQLEVKNQLQDKDTKKVSNQRLSIGMTP 240
                 LL+    +I   V      L  + +S    + + LQ   T  V++QRLSIGMTP
Sbjct: 181 A--RKSLLRVDSQQIKDFV------LEGTSESQMFGMHDGLQ---TPGVTSQRLSIGMTP 240

Query: 241 KTRRLPKPGEVLVSIHGSPLGVYREENMEAIHESEEG 278
           KT+RLPKPGE+L+S+HGSPLGVY+EENMEAIHESEEG
Sbjct: 241 KTKRLPKPGEILLSVHGSPLGVYKEENMEAIHESEEG 240

[Close]

BLAST of Cp4.1LG10g01060 vs. TrEMBL
Match: A0A0D2T9T5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G062000 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 2.4e-48
Identity = 129/277 (46.57%), Postives = 169/277 (61.01%), Query Frame = 1


Query: 1   MARRKAKKSVKKSSPSPVREAKDGSANELKSEDQASLVSDEDVERHATAIRAIRDVEIER 60
           MA+R+AKK+VK+   S   E +     E ++E+  S +  ++VER   AIRA+RDVEIE 
Sbjct: 1   MAKRRAKKTVKEVPASAECEVERNDKKEDQNEENISGLIYQEVERQCAAIRAVRDVEIEH 60

Query: 61  LITELRLLRSYFNKEQLQTPLLQFFEEKLPSLSISRRGEQGEIEVQWKNTEDELHTNPAD 120
           ++T LRLLRSYF++EQLQTP LQFF E LP+LSI R  E G+ EVQWK+ +  +  + AD
Sbjct: 61  MLTALRLLRSYFSEEQLQTPALQFFNENLPNLSIVRNAENGQFEVQWKHEDGNISIHGAD 120

Query: 121 GIDIHASLLHRLSTAYPNCSAGMRSFNGFEFSSKSVKTNPFNVENLQIPNFALEEPSDNM 180
           G D+HASLLHR+S  Y N  +                          IP+F+  E S   
Sbjct: 121 GRDVHASLLHRMSLVYANRPS--------------------------IPSFSGFEFSTEA 180

Query: 181 VLGMPDLLQTPGVRIFMVVHILKCTLLSSDQSYQLEVKNQLQDKDTKKVSNQRLSIGMTP 240
                 LL+    +I   V      L  + +S    + + LQ   T  V++QRLSIGMTP
Sbjct: 181 A--RKSLLRVDSQQIKDFV------LEGTSESQMFGMHDGLQ---TPGVTSQRLSIGMTP 240

Query: 241 KTRRLPKPGEVLVSIHGSPLGVYREENMEAIHESEEG 278
           KT+RLPKPGE+L+S+HGSPLGVY+EENMEAIHESEEG
Sbjct: 241 KTKRLPKPGEILLSVHGSPLGVYKEENMEAIHESEEG 240

[Close]

BLAST of Cp4.1LG10g01060 vs. TAIR10
Match: AT4G39630.1 (AT4G39630.1 unknown protein)

HSP 1 Score: 130.6 bits (327), Expect = 1.5e-30
Identity = 80/193 (41.45%), Postives = 115/193 (59.59%), Query Frame = 1


Query: 1   MARRKAKKSVKKSSPSPVREAKDGSANELKSEDQASLVSDEDVERHATAIRAIRDVEIER 60
           M +RKAK+ VK      + E        ++ E++     DE+VER   AIRAIRDVEIE+
Sbjct: 1   MPKRKAKECVK------LTEEDRNDEKRIRIEEKKEDFVDEEVERQIAAIRAIRDVEIEQ 60

Query: 61  LITELRLLRSYFNKEQLQTPLLQFFEEKLPSLSISRRGEQGEIEVQWKNTEDELHTNPAD 120
           ++T LRLLRSYF +EQL TP+L FF+E LP LSISR  E GEIE++W++   +      +
Sbjct: 61  MLTALRLLRSYFTEEQLHTPVLDFFKENLPDLSISRNEETGEIELKWRDENGDSFAGNEN 120

Query: 121 GIDIHASLLHRLSTAYPNCSAGMRSFNGFEFSSKSVKTNPFNVENLQIPNFALEEPSDNM 180
           G+D++ S+L RLS  + +  +   S  G++    +VK N    +N Q+ N   +  S+N 
Sbjct: 121 GVDMNYSILKRLSMRFTDLYS-RSSLGGYDLPD-NVKANLLGTDNPQLDNLVFQGTSENQ 180

Query: 181 VLGMPDLLQTPGV 194
           +L   D  QTPGV
Sbjct: 181 MLPGHDAFQTPGV 185

[Close]

BLAST of Cp4.1LG10g01060 vs. NCBI nr
Match: gi|659091950|ref|XP_008446820.1| (PREDICTED: uncharacterized protein LOC103489436 isoform X1 [Cucumis melo])

HSP 1 Score: 400.2 bits (1027), Expect = 2.9e-108
Identity = 216/277 (77.98%), Postives = 230/277 (83.03%), Query Frame = 1


Query: 1   MARRKAKKSVKKSSPSPVREAKDGSANELKSEDQASLVSDEDVERHATAIRAIRDVEIER 60
           MARRKAKK+VKKSSPS  R AKD +A+++K+       SDEDVERHA AIRAIRDVEIER
Sbjct: 1   MARRKAKKTVKKSSPSSGRHAKDEAADKIKTH------SDEDVERHAAAIRAIRDVEIER 60

Query: 61  LITELRLLRSYFNKEQLQTPLLQFFEEKLPSLSISRRGEQGEIEVQWKNTEDELHTNPAD 120
           LITELRLLRSYFNKEQLQTPLLQFFEEKLPSLSIS RG+QGEIEVQWK+TEDELHTNPAD
Sbjct: 61  LITELRLLRSYFNKEQLQTPLLQFFEEKLPSLSISIRGDQGEIEVQWKDTEDELHTNPAD 120

Query: 121 GIDIHASLLHRLSTAYPNCSAGMRSFNGFEFSSKSVKTNPFNVENLQIPNFALEEPSDNM 180
           G+DIHASLLHRLSTAYP CSAGMRSFNGFEFSSKSVKTNPFN ENLQIPNF LEEPSDNM
Sbjct: 121 GVDIHASLLHRLSTAYPYCSAGMRSFNGFEFSSKSVKTNPFNAENLQIPNFVLEEPSDNM 180

Query: 181 VLGMPDLLQTPGVRIFMVVHILKCTLLSSDQSYQLEVKNQLQDKDTKKVSNQRLSIGMTP 240
           VLGMPD+LQTPGVRIFM                               +SNQRLSIGMTP
Sbjct: 181 VLGMPDILQTPGVRIFM-------------------------------ISNQRLSIGMTP 240

Query: 241 KTRRLPKPGEVLVSIHGSPLGVYREENMEAIHESEEG 278
           KTRRLPKPGE+LVSIHGSPLGVY+E+NMEAIHESEEG
Sbjct: 241 KTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESEEG 240

[Close]

BLAST of Cp4.1LG10g01060 vs. NCBI nr
Match: gi|778706510|ref|XP_011655865.1| (PREDICTED: uncharacterized protein LOC101204054 isoform X1 [Cucumis sativus])

HSP 1 Score: 393.7 bits (1010), Expect = 2.7e-106
Identity = 212/277 (76.53%), Postives = 229/277 (82.67%), Query Frame = 1


Query: 1   MARRKAKKSVKKSSPSPVREAKDGSANELKSEDQASLVSDEDVERHATAIRAIRDVEIER 60
           MARRKAKK+VKKSSPS  R+AKD + N+LK++      SDEDVERHA AIRAIRDVEIER
Sbjct: 3   MARRKAKKTVKKSSPSSGRDAKDEAVNKLKTD------SDEDVERHAAAIRAIRDVEIER 62

Query: 61  LITELRLLRSYFNKEQLQTPLLQFFEEKLPSLSISRRGEQGEIEVQWKNTEDELHTNPAD 120
           LIT LRLLRSYFNKEQLQTPLLQFFEEKLPSLSIS RG+QGEIEV+WK+TEDELHTNPAD
Sbjct: 63  LITVLRLLRSYFNKEQLQTPLLQFFEEKLPSLSISIRGKQGEIEVRWKDTEDELHTNPAD 122

Query: 121 GIDIHASLLHRLSTAYPNCSAGMRSFNGFEFSSKSVKTNPFNVENLQIPNFALEEPSDNM 180
           G+DIHASLLHRLSTAYP CSAGMRSFNGFEFSSKSVKTNPFN ENLQIPNF LEEPSD+M
Sbjct: 123 GVDIHASLLHRLSTAYPYCSAGMRSFNGFEFSSKSVKTNPFNAENLQIPNFVLEEPSDDM 182

Query: 181 VLGMPDLLQTPGVRIFMVVHILKCTLLSSDQSYQLEVKNQLQDKDTKKVSNQRLSIGMTP 240
            LGMPD++QTPGVRIFM                               +SNQRLSIGMTP
Sbjct: 183 TLGMPDIVQTPGVRIFM-------------------------------ISNQRLSIGMTP 242

Query: 241 KTRRLPKPGEVLVSIHGSPLGVYREENMEAIHESEEG 278
           KTRRLPKPGE+LVSIHGSPLGVY+E+NMEAIHESEEG
Sbjct: 243 KTRRLPKPGEMLVSIHGSPLGVYKEDNMEAIHESEEG 242

[Close]

BLAST of Cp4.1LG10g01060 vs. NCBI nr
Match: gi|659080202|ref|XP_008440665.1| (PREDICTED: uncharacterized protein LOC103485008 [Cucumis melo])

HSP 1 Score: 333.6 bits (854), Expect = 3.4e-88
Identity = 192/277 (69.31%), Postives = 205/277 (74.01%), Query Frame = 1


Query: 1   MARRKAKKSVKKSSPSPVREAKDGSANELKSEDQASLVSDEDVERHATAIRAIRDVEIER 60
           MARRKAKK+VKKS+PSPV EAKD +AN            DEDVERHA AIRAIRDVEI R
Sbjct: 1   MARRKAKKTVKKSNPSPVLEAKDETAN------------DEDVERHAAAIRAIRDVEIGR 60

Query: 61  LITELRLLRSYFNKEQLQTPLLQFFEEKLPSLSISRRGEQGEIEVQWKNTEDELHTNPAD 120
           LITELRLLRSYFNKEQLQTPLLQFFEEKLP LSISR GEQGEIEVQWK+TEDEL TNPAD
Sbjct: 61  LITELRLLRSYFNKEQLQTPLLQFFEEKLPRLSISRTGEQGEIEVQWKDTEDELRTNPAD 120

Query: 121 GIDIHASLLHRLSTAYPNCSAGMRSFNGFEFSSKSVKTNPFNVENLQIPNFALEEPSDNM 180
           GIDIHASLLHRLS AYPNCSAGMRSFNGFEFSSKSVKTNPF VENLQIPNF LEEPSDNM
Sbjct: 121 GIDIHASLLHRLSIAYPNCSAGMRSFNGFEFSSKSVKTNPFIVENLQIPNFDLEEPSDNM 180

Query: 181 VLGMPDLLQTPGVRIFMVVHILKCTLLSSDQSYQLEVKNQLQDKDTKKVSNQRLSIGMTP 240
           VLGMPD+LQTPGV             ++   S  +  K +   K  + +           
Sbjct: 181 VLGMPDILQTPGV-------------INQRLSIGMTPKTRRLPKPGEML----------- 229

Query: 241 KTRRLPKPGEVLVSIHGSPLGVYREENMEAIHESEEG 278
                       VSIHGSPLGVY+E+NMEAIHESEEG
Sbjct: 241 ------------VSIHGSPLGVYKEDNMEAIHESEEG 229

[Close]

BLAST of Cp4.1LG10g01060 vs. NCBI nr
Match: gi|659091954|ref|XP_008446822.1| (PREDICTED: uncharacterized protein LOC103489436 isoform X2 [Cucumis melo])

HSP 1 Score: 326.6 bits (836), Expect = 4.1e-86
Identity = 186/277 (67.15%), Postives = 206/277 (74.37%), Query Frame = 1


Query: 1   MARRKAKKSVKKSSPSPVREAKDGSANELKSEDQASLVSDEDVERHATAIRAIRDVEIER 60
           MARRKAKK+VKKSSPS  R AKD +A+++K+       SDEDVERHA AIRAIRDVEIER
Sbjct: 1   MARRKAKKTVKKSSPSSGRHAKDEAADKIKTH------SDEDVERHAAAIRAIRDVEIER 60

Query: 61  LITELRLLRSYFNKEQLQTPLLQFFEEKLPSLSISRRGEQGEIEVQWKNTEDELHTNPAD 120
           LITELRLLRSYFNKEQLQTPLLQFFEEKLPSLSIS RG+QGEIEVQWK+TEDELHTNPAD
Sbjct: 61  LITELRLLRSYFNKEQLQTPLLQFFEEKLPSLSISIRGDQGEIEVQWKDTEDELHTNPAD 120

Query: 121 GIDIHASLLHRLSTAYPNCSAGMRSFNGFEFSSKSVKTNPFNVENLQIPNFALEEPSDNM 180
           G+DIHASLLHRLSTAYP CSAGMRSFNGFEFSSKSVKTNPFN ENLQIPNF LEEPSDNM
Sbjct: 121 GVDIHASLLHRLSTAYPYCSAGMRSFNGFEFSSKSVKTNPFNAENLQIPNFVLEEPSDNM 180

Query: 181 VLGMPDLLQTPGVRIFMVVHILKCTLLSSDQSYQLEVKNQLQDKDTKKVSNQRLSIGMTP 240
           VLGMPD+LQTPG+                  + +L +    + +   K     +SI  +P
Sbjct: 181 VLGMPDILQTPGI-----------------SNQRLSIGMTPKTRRLPKPGEMLVSIHGSP 235

Query: 241 KTRRLPKPGEVLVSIHGSPLGVYREENMEAIHESEEG 278
                               GVY+E+NMEAIHESEEG
Sbjct: 241 L-------------------GVYKEDNMEAIHESEEG 235

[Close]

BLAST of Cp4.1LG10g01060 vs. NCBI nr
Match: gi|778706526|ref|XP_011655868.1| (PREDICTED: uncharacterized protein LOC101204054 isoform X2 [Cucumis sativus])

HSP 1 Score: 320.1 bits (819), Expect = 3.8e-84
Identity = 182/277 (65.70%), Postives = 205/277 (74.01%), Query Frame = 1


Query: 1   MARRKAKKSVKKSSPSPVREAKDGSANELKSEDQASLVSDEDVERHATAIRAIRDVEIER 60
           MARRKAKK+VKKSSPS  R+AKD + N+LK++      SDEDVERHA AIRAIRDVEIER
Sbjct: 3   MARRKAKKTVKKSSPSSGRDAKDEAVNKLKTD------SDEDVERHAAAIRAIRDVEIER 62

Query: 61  LITELRLLRSYFNKEQLQTPLLQFFEEKLPSLSISRRGEQGEIEVQWKNTEDELHTNPAD 120
           LIT LRLLRSYFNKEQLQTPLLQFFEEKLPSLSIS RG+QGEIEV+WK+TEDELHTNPAD
Sbjct: 63  LITVLRLLRSYFNKEQLQTPLLQFFEEKLPSLSISIRGKQGEIEVRWKDTEDELHTNPAD 122

Query: 121 GIDIHASLLHRLSTAYPNCSAGMRSFNGFEFSSKSVKTNPFNVENLQIPNFALEEPSDNM 180
           G+DIHASLLHRLSTAYP CSAGMRSFNGFEFSSKSVKTNPFN ENLQIPNF LEEPSD+M
Sbjct: 123 GVDIHASLLHRLSTAYPYCSAGMRSFNGFEFSSKSVKTNPFNAENLQIPNFVLEEPSDDM 182

Query: 181 VLGMPDLLQTPGVRIFMVVHILKCTLLSSDQSYQLEVKNQLQDKDTKKVSNQRLSIGMTP 240
            LGMPD++QTPG+                  + +L +    + +   K     +SI  +P
Sbjct: 183 TLGMPDIVQTPGI-----------------SNQRLSIGMTPKTRRLPKPGEMLVSIHGSP 237

Query: 241 KTRRLPKPGEVLVSIHGSPLGVYREENMEAIHESEEG 278
                               GVY+E+NMEAIHESEEG
Sbjct: 243 L-------------------GVYKEDNMEAIHESEEG 237

The following BLAST results are available for this feature:

BLAST of Cp4.1LG10g01060 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG10g01060 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KRH4_CUCSA	1.9e-106	76.53	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G622550 PE=4 SV=1	[more]
A0A0A0KK81_CUCSA	2.3e-83	66.43	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G501280 PE=4 SV=1	[more]
M5VZV5_PRUPE	2.5e-50	45.85	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010712mg PE=4 SV=1	[more]
A0A0B0NLX1_GOSAR	1.6e-49	46.57	Putative cytochrome P450 OS=Gossypium arboreum GN=F383_02081 PE=4 SV=1	[more]
A0A0D2T9T5_GOSRA	2.4e-48	46.57	Uncharacterized protein OS=Gossypium raimondii GN=B456_007G062000 PE=4 SV=1	[more]

BLAST of Cp4.1LG10g01060 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G39630.1	1.5e-30	41.45	unknown protein	[more]

BLAST of Cp4.1LG10g01060 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659091950\|ref\|XP_008446820.1\|	2.9e-108	77.98	PREDICTED: uncharacterized protein LOC103489436 isoform X1 [Cucumis melo]	[more]
gi\|778706510\|ref\|XP_011655865.1\|	2.7e-106	76.53	PREDICTED: uncharacterized protein LOC101204054 isoform X1 [Cucumis sativus]	[more]
gi\|659080202\|ref\|XP_008440665.1\|	3.4e-88	69.31	PREDICTED: uncharacterized protein LOC103485008 [Cucumis melo]	[more]
gi\|659091954\|ref\|XP_008446822.1\|	4.1e-86	67.15	PREDICTED: uncharacterized protein LOC103489436 isoform X2 [Cucumis melo]	[more]
gi\|778706526\|ref\|XP_011655868.1\|	3.8e-84	65.70	PREDICTED: uncharacterized protein LOC101204054 isoform X2 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016569	chromatin modification
biological_process	GO:0016458	gene silencing
biological_process	GO:0090304	nucleic acid metabolic process
biological_process	GO:2000112	regulation of cellular macromolecule biosynthetic process
biological_process	GO:0019219	regulation of nucleobase-containing compound metabolic process
biological_process	GO:1902589	single-organism organelle organization
biological_process	GO:0048856	anatomical structure development
biological_process	GO:0006342	chromatin silencing
biological_process	GO:0034968	histone lysine methylation
biological_process	GO:1903047	mitotic cell cycle process
biological_process	GO:0044767	single-organism developmental process
biological_process	GO:0008150	biological_process
biological_process	GO:0044271	cellular nitrogen compound biosynthetic process
biological_process	GO:0044267	cellular protein metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG10g01060.1	Cp4.1LG10g01060.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37248	FAMILY NOT NAMED	coord: 230..277 score: 6.2E-99coord: 1..193 score: 6.2
None	No IPR available	PANTHER	PTHR37248:SF1	SUBFAMILY NOT NAMED	coord: 1..193 score: 6.2E-99coord: 230..277 score: 6.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG10g01060	Cucsa.104730	Cucumber (Gy14) v1	cgycpeB0211
Cp4.1LG10g01060	CmaCh03G007840	Cucurbita maxima (Rimu)	cmacpeB656
Cp4.1LG10g01060	CmaCh07G005150	Cucurbita maxima (Rimu)	cmacpeB866
Cp4.1LG10g01060	CmoCh07G005100	Cucurbita moschata (Rifu)	cmocpeB806
Cp4.1LG10g01060	CmoCh03G008180	Cucurbita moschata (Rifu)	cmocpeB606
Cp4.1LG10g01060	Cla014177	Watermelon (97103) v1	cpewmB073
Cp4.1LG10g01060	Csa6G501280	Cucumber (Chinese Long) v2	cpecuB085
Cp4.1LG10g01060	MELO3C007790	Melon (DHL92) v3.5.1	cpemeB060
Cp4.1LG10g01060	ClCG01G019130	Watermelon (Charleston Gray)	cpewcgB061
Cp4.1LG10g01060	CSPI06G30600	Wild cucumber (PI 183967)	cpecpiB080
Cp4.1LG10g01060	Lsi01G007240	Bottle gourd (USVL1VR-Ls)	cpelsiB054
Cp4.1LG10g01060	MELO3C007790.2	Melon (DHL92) v3.6.1	cpemedB080
Cp4.1LG10g01060	CsaV3_6G045820	Cucumber (Chinese Long) v3	cpecucB0092
Cp4.1LG10g01060	Bhi03G000953	Wax gourd	cpewgoB0084
Cp4.1LG10g01060	CsGy6G030060	Cucumber (Gy14) v2	cgybcpeB710
Cp4.1LG10g01060	Carg16025	Silver-seed gourd	carcpeB1064
Cp4.1LG10g01060	Carg00669	Silver-seed gourd	carcpeB0554

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG10g01060	Cp4.1LG19g09490	Cucurbita pepo (Zucchini)	cpecpeB076

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG10g01060	Cucurbita pepo (Zucchini)	cpecpeB065
Cp4.1LG10g01060	Cucurbita pepo (Zucchini)	cpecpeB073
Cp4.1LG10g01060	Cucurbita maxima (Rimu)	cmacpeB702
Cp4.1LG10g01060	Cucurbita moschata (Rifu)	cmocpeB655
Cp4.1LG10g01060	Melon (DHL92) v3.6.1	cpemedB079
Cp4.1LG10g01060	Silver-seed gourd	carcpeB1300
Cp4.1LG10g01060	Silver-seed gourd	carcpeB1413