MELO3C007199.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C007199.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionBnaCnng70620D protein
Locationchr08 : 1428341 .. 1429110 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGTGTGTGTTCTTTTTCTTGGATTTGAAATTCAATTGGGTTCCAAATTTCCATCAATGTCCATTCCTGAACTGCCATTTTCACCTTCTAATCCAAAGGTTCAGAGAGTGTCAAAATCCACTTCAGACAGGTTGCTTCAGAAATTCTTCGATGCTACTGAATTTGGATTTGATTACGAGAGAAGTGGGCTGTGGTCTCCCCCTCTTCAACGCACTGTTTATTTAACTTCTTCGGGTCAAGTCCTCAATCAAACGGATTTACATACAAAACTTCAGACGGTCTTGAATTCTCGAAGTAGAACACATAAAAGTTGTTTCAAATTCAGAGTAAGTCCCGTCTTTCCTTTTACCTTCTTTTTTTTTTTTTTTCTTTCTTTTGTTTCTCTTTTAATCTTGTTTTCTTTTCACTATTGCCTTTAGATTTTATAAAATCCCAAATAATGTGTTCATACATTGGTTTAATTTCGTGTTTTAGAATTAGATGTTTGCAGTTTATATGTTGTAGGTGTTTTGGTGCTATGTGAAGCAAATCTGAAAGCTGGAATTTTTATTGCTTCTAATGGCTTCAATTTTTTACCGAACGCGATGGATGATAATGGAGTTTCATAGTCCCACTCCCAGCCAAAACAAAAGCAGAAGGGGTCCCCCAAAGAAGGAGAAAAAACCCATCCTATACAGTTCTTATTTTGTTTATTTTGTATAACTTCATTATTGTTGATATAACATATTAATGTAGCTAATCCAAAGTTCAATCATATAACATCAATCAAAT

mRNA sequence

TGTGTGTGTTCTTTTTCTTGGATTTGAAATTCAATTGGGTTCCAAATTTCCATCAATGTCCATTCCTGAACTGCCATTTTCACCTTCTAATCCAAAGGTTCAGAGAGTGTCAAAATCCACTTCAGACAGGTTGCTTCAGAAATTCTTCGATGCTACTGAATTTGGATTTGATTACGAGAGAAGTGGGCTGTGGTCTCCCCCTCTTCAACGCACTGTTTATTTAACTTCTTCGGGTCAAGTCCTCAATCAAACGGATTTACATACAAAACTTCAGACGGTCTTGAATTCTCGAAGTAGAACACATAAAAGTTGTTTCAAATTCAGATTTATATGTTGTAGGTGTTTTGGTGCTATGTGAAGCAAATCTGAAAGCTGGAATTTTTATTGCTTCTAATGGCTTCAATTTTTTACCGAACGCGATGGATGATAATGGAGTTTCATAGTCCCACTCCCAGCCAAAACAAAAGCAGAAGGGGTCCCCCAAAGAAGGAGAAAAAACCCATCCTATACAGTTCTTATTTTGTTTATTTTGTATAACTTCATTATTGTTGATATAACATATTAATGTAGCTAATCCAAAGTTCAATCATATAACATCAATCAAAT

Coding sequence (CDS)

ATGTCCATTCCTGAACTGCCATTTTCACCTTCTAATCCAAAGGTTCAGAGAGTGTCAAAATCCACTTCAGACAGGTTGCTTCAGAAATTCTTCGATGCTACTGAATTTGGATTTGATTACGAGAGAAGTGGGCTGTGGTCTCCCCCTCTTCAACGCACTGTTTATTTAACTTCTTCGGGTCAAGTCCTCAATCAAACGGATTTACATACAAAACTTCAGACGGTCTTGAATTCTCGAAGTAGAACACATAAAAGTTGTTTCAAATTCAGATTTATATGTTGTAGGTGTTTTGGTGCTATGTGA

Protein sequence

MSIPELPFSPSNPKVQRVSKSTSDRLLQKFFDATEFGFDYERSGLWSPPLQRTVYLTSSGQVLNQTDLHTKLQTVLNSRSRTHKSCFKFRFICCRCFGAM
Homology
[Close]
BLAST of MELO3C007199.2 vs. NCBI nr
Match: KGN49322.1 (hypothetical protein Csa_6G519730 [Cucumis sativus])

HSP 1 Score: 185.7 bits (470), Expect = 7.9e-44
Identity = 91/94 (96.81%), Postives = 91/94 (96.81%), Query Frame = 0 

Query: 1  MSIPELPFSPSNPKVQRVSKSTSDRLLQKFFDATEFGFDYERSGLWSPPLQRTVYLTSSG 60
          MSIPELPFSPSNPKVQRVSKSTSDRLLQKFFDATEFGFDYERSGLWSPPLQRTVYLTSSG
Sbjct: 1  MSIPELPFSPSNPKVQRVSKSTSDRLLQKFFDATEFGFDYERSGLWSPPLQRTVYLTSSG 60

Query: 61 QVLNQTDLHTKLQTVLNSRSRTHKSCFKFRFICC 95
          QVLNQTDLHTKLQTVLNSRSRTHKSCFKFR   C
Sbjct: 61 QVLNQTDLHTKLQTVLNSRSRTHKSCFKFRVFWC 94

[Close]
BLAST of MELO3C007199.2 vs. NCBI nr
Match: XP_018849993.1 (PREDICTED: uncharacterized protein LOC109012687 isoform X1 [Juglans regia])

HSP 1 Score: 105.1 bits (261), Expect = 1.4e-19
Identity = 55/107 (51.40%), Postives = 76/107 (71.03%), Query Frame = 0 

Query: 1   MSIPELPFSPSNP----------KVQRVSKSTSDRLLQKFFDATEFGFDYERSGLWSPPL 60
           MSIPE PFS S+P          +V+ VSK  SDRL+QKF+D +EFGFDYE+SGLWSPP+
Sbjct: 52  MSIPESPFSSSSPSPSLPQTSSGRVELVSKFVSDRLVQKFYDVSEFGFDYEQSGLWSPPV 111

Query: 61  QRTVYLTSSGQVLNQTDLHTKLQTVL--NSRSRTHKS-CFKFRFICC 95
           QRTV+++SSG++  + D+ +KL++ L  + R R H+S CF    +CC
Sbjct: 112 QRTVFMSSSGKIFTEADILSKLRSALQRHRRGRKHRSLCFNV-LVCC 157

[Close]
BLAST of MELO3C007199.2 vs. NCBI nr
Match: XP_018849994.1 (PREDICTED: uncharacterized protein LOC109012687 isoform X2 [Juglans regia])

HSP 1 Score: 105.1 bits (261), Expect = 1.4e-19
Identity = 58/116 (50.00%), Postives = 79/116 (68.10%), Query Frame = 0 

Query: 1   MSIPELPFSPSNP----------KVQRVSKSTSDRLLQKFFDATEFGFDYERSGLWSPPL 60
           MSIPE PFS S+P          +V+ VSK  SDRL+QKF+D +EFGFDYE+SGLWSPP+
Sbjct: 32  MSIPESPFSSSSPSPSLPQTSSGRVELVSKFVSDRLVQKFYDVSEFGFDYEQSGLWSPPV 91

Query: 61  QRTVYLTSSGQVLNQTDLHTKLQTVL--NSRSRTHKS-CFKFRFICC---RCFGAM 101
           QRTV+++SSG++  + D+ +KL++ L  + R R H+S CF    +CC   RC   M
Sbjct: 92  QRTVFMSSSGKIFTEADILSKLRSALQRHRRGRKHRSLCFNV-LVCCFRVRCSRVM 146

[Close]
BLAST of MELO3C007199.2 vs. NCBI nr
Match: XP_018849995.1 (PREDICTED: uncharacterized protein LOC109012687 isoform X3 [Juglans regia])

HSP 1 Score: 105.1 bits (261), Expect = 1.4e-19
Identity = 55/107 (51.40%), Postives = 76/107 (71.03%), Query Frame = 0 

Query: 1   MSIPELPFSPSNP----------KVQRVSKSTSDRLLQKFFDATEFGFDYERSGLWSPPL 60
           MSIPE PFS S+P          +V+ VSK  SDRL+QKF+D +EFGFDYE+SGLWSPP+
Sbjct: 32  MSIPESPFSSSSPSPSLPQTSSGRVELVSKFVSDRLVQKFYDVSEFGFDYEQSGLWSPPV 91

Query: 61  QRTVYLTSSGQVLNQTDLHTKLQTVL--NSRSRTHKS-CFKFRFICC 95
           QRTV+++SSG++  + D+ +KL++ L  + R R H+S CF    +CC
Sbjct: 92  QRTVFMSSSGKIFTEADILSKLRSALQRHRRGRKHRSLCFNV-LVCC 137

[Close]
BLAST of MELO3C007199.2 vs. NCBI nr
Match: XP_018849996.1 (PREDICTED: uncharacterized protein LOC109012687 isoform X4 [Juglans regia])

HSP 1 Score: 105.1 bits (261), Expect = 1.4e-19
Identity = 55/107 (51.40%), Postives = 76/107 (71.03%), Query Frame = 0 

Query: 1   MSIPELPFSPSNP----------KVQRVSKSTSDRLLQKFFDATEFGFDYERSGLWSPPL 60
           MSIPE PFS S+P          +V+ VSK  SDRL+QKF+D +EFGFDYE+SGLWSPP+
Sbjct: 32  MSIPESPFSSSSPSPSLPQTSSGRVELVSKFVSDRLVQKFYDVSEFGFDYEQSGLWSPPV 91

Query: 61  QRTVYLTSSGQVLNQTDLHTKLQTVL--NSRSRTHKS-CFKFRFICC 95
           QRTV+++SSG++  + D+ +KL++ L  + R R H+S CF    +CC
Sbjct: 92  QRTVFMSSSGKIFTEADILSKLRSALQRHRRGRKHRSLCFNV-LVCC 137

[Close]
BLAST of MELO3C007199.2 vs. TrEMBL
Match: tr|A0A0A0KLQ8|A0A0A0KLQ8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G519730 PE=4 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 5.3e-44
Identity = 91/94 (96.81%), Postives = 91/94 (96.81%), Query Frame = 0 

Query: 1  MSIPELPFSPSNPKVQRVSKSTSDRLLQKFFDATEFGFDYERSGLWSPPLQRTVYLTSSG 60
          MSIPELPFSPSNPKVQRVSKSTSDRLLQKFFDATEFGFDYERSGLWSPPLQRTVYLTSSG
Sbjct: 1  MSIPELPFSPSNPKVQRVSKSTSDRLLQKFFDATEFGFDYERSGLWSPPLQRTVYLTSSG 60

Query: 61 QVLNQTDLHTKLQTVLNSRSRTHKSCFKFRFICC 95
          QVLNQTDLHTKLQTVLNSRSRTHKSCFKFR   C
Sbjct: 61 QVLNQTDLHTKLQTVLNSRSRTHKSCFKFRVFWC 94

[Close]
BLAST of MELO3C007199.2 vs. TrEMBL
Match: tr|A0A2I4H1H8|A0A2I4H1H8_9ROSI (uncharacterized protein LOC109012687 isoform X1 OS=Juglans regia OX=51240 GN=LOC109012687 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 9.0e-20
Identity = 55/107 (51.40%), Postives = 76/107 (71.03%), Query Frame = 0 

Query: 1   MSIPELPFSPSNP----------KVQRVSKSTSDRLLQKFFDATEFGFDYERSGLWSPPL 60
           MSIPE PFS S+P          +V+ VSK  SDRL+QKF+D +EFGFDYE+SGLWSPP+
Sbjct: 52  MSIPESPFSSSSPSPSLPQTSSGRVELVSKFVSDRLVQKFYDVSEFGFDYEQSGLWSPPV 111

Query: 61  QRTVYLTSSGQVLNQTDLHTKLQTVL--NSRSRTHKS-CFKFRFICC 95
           QRTV+++SSG++  + D+ +KL++ L  + R R H+S CF    +CC
Sbjct: 112 QRTVFMSSSGKIFTEADILSKLRSALQRHRRGRKHRSLCFNV-LVCC 157

[Close]
BLAST of MELO3C007199.2 vs. TrEMBL
Match: tr|A0A2I4H1F6|A0A2I4H1F6_9ROSI (uncharacterized protein LOC109012687 isoform X4 OS=Juglans regia OX=51240 GN=LOC109012687 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 9.0e-20
Identity = 55/107 (51.40%), Postives = 76/107 (71.03%), Query Frame = 0 

Query: 1   MSIPELPFSPSNP----------KVQRVSKSTSDRLLQKFFDATEFGFDYERSGLWSPPL 60
           MSIPE PFS S+P          +V+ VSK  SDRL+QKF+D +EFGFDYE+SGLWSPP+
Sbjct: 32  MSIPESPFSSSSPSPSLPQTSSGRVELVSKFVSDRLVQKFYDVSEFGFDYEQSGLWSPPV 91

Query: 61  QRTVYLTSSGQVLNQTDLHTKLQTVL--NSRSRTHKS-CFKFRFICC 95
           QRTV+++SSG++  + D+ +KL++ L  + R R H+S CF    +CC
Sbjct: 92  QRTVFMSSSGKIFTEADILSKLRSALQRHRRGRKHRSLCFNV-LVCC 137

[Close]
BLAST of MELO3C007199.2 vs. TrEMBL
Match: tr|A0A2I4H1H1|A0A2I4H1H1_9ROSI (uncharacterized protein LOC109012687 isoform X3 OS=Juglans regia OX=51240 GN=LOC109012687 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 9.0e-20
Identity = 55/107 (51.40%), Postives = 76/107 (71.03%), Query Frame = 0 

Query: 1   MSIPELPFSPSNP----------KVQRVSKSTSDRLLQKFFDATEFGFDYERSGLWSPPL 60
           MSIPE PFS S+P          +V+ VSK  SDRL+QKF+D +EFGFDYE+SGLWSPP+
Sbjct: 32  MSIPESPFSSSSPSPSLPQTSSGRVELVSKFVSDRLVQKFYDVSEFGFDYEQSGLWSPPV 91

Query: 61  QRTVYLTSSGQVLNQTDLHTKLQTVL--NSRSRTHKS-CFKFRFICC 95
           QRTV+++SSG++  + D+ +KL++ L  + R R H+S CF    +CC
Sbjct: 92  QRTVFMSSSGKIFTEADILSKLRSALQRHRRGRKHRSLCFNV-LVCC 137

[Close]
BLAST of MELO3C007199.2 vs. TrEMBL
Match: tr|A0A2I4H1I2|A0A2I4H1I2_9ROSI (uncharacterized protein LOC109012687 isoform X2 OS=Juglans regia OX=51240 GN=LOC109012687 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 9.0e-20
Identity = 58/116 (50.00%), Postives = 79/116 (68.10%), Query Frame = 0 

Query: 1   MSIPELPFSPSNP----------KVQRVSKSTSDRLLQKFFDATEFGFDYERSGLWSPPL 60
           MSIPE PFS S+P          +V+ VSK  SDRL+QKF+D +EFGFDYE+SGLWSPP+
Sbjct: 32  MSIPESPFSSSSPSPSLPQTSSGRVELVSKFVSDRLVQKFYDVSEFGFDYEQSGLWSPPV 91

Query: 61  QRTVYLTSSGQVLNQTDLHTKLQTVL--NSRSRTHKS-CFKFRFICC---RCFGAM 101
           QRTV+++SSG++  + D+ +KL++ L  + R R H+S CF    +CC   RC   M
Sbjct: 92  QRTVFMSSSGKIFTEADILSKLRSALQRHRRGRKHRSLCFNV-LVCCFRVRCSRVM 146

The following BLAST results are available for this feature:
BLAST of MELO3C007199.2 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN49322.17.9e-4496.81hypothetical protein Csa_6G519730 [Cucumis sativus][more]
XP_018849993.11.4e-1951.40PREDICTED: uncharacterized protein LOC109012687 isoform X1 [Juglans regia][more]
XP_018849994.11.4e-1950.00PREDICTED: uncharacterized protein LOC109012687 isoform X2 [Juglans regia][more]
XP_018849995.11.4e-1951.40PREDICTED: uncharacterized protein LOC109012687 isoform X3 [Juglans regia][more]
XP_018849996.11.4e-1951.40PREDICTED: uncharacterized protein LOC109012687 isoform X4 [Juglans regia][more]
BLAST of MELO3C007199.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C007199.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C007199.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KLQ8|A0A0A0KLQ8_CUCSA5.3e-4496.81Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G519730 PE=4 SV=1[more]
tr|A0A2I4H1H8|A0A2I4H1H8_9ROSI9.0e-2051.40uncharacterized protein LOC109012687 isoform X1 OS=Juglans regia OX=51240 GN=LOC... [more]
tr|A0A2I4H1F6|A0A2I4H1F6_9ROSI9.0e-2051.40uncharacterized protein LOC109012687 isoform X4 OS=Juglans regia OX=51240 GN=LOC... [more]
tr|A0A2I4H1H1|A0A2I4H1H1_9ROSI9.0e-2051.40uncharacterized protein LOC109012687 isoform X3 OS=Juglans regia OX=51240 GN=LOC... [more]
tr|A0A2I4H1I2|A0A2I4H1I2_9ROSI9.0e-2050.00uncharacterized protein LOC109012687 isoform X2 OS=Juglans regia OX=51240 GN=LOC... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C007199.2.1MELO3C007199.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availablePANTHERPTHR34287FAMILY NOT NAMEDcoord: 4..94
NoneNo IPR availablePANTHERPTHR34287:SF2SUBFAMILY NOT NAMEDcoord: 4..94

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C007199.2Csa6G519730Cucumber (Chinese Long) v2cumedB486
MELO3C007199.2CSPI06G35540Wild cucumber (PI 183967)cpimedB496
MELO3C007199.2Cucsa.047110Cucumber (Gy14) v1cgymedB025
MELO3C007199.2CmaCh03G013340Cucurbita maxima (Rimu)cmamedB704
MELO3C007199.2CmaCh07G001730Cucurbita maxima (Rimu)cmamedB897
MELO3C007199.2CmoCh07G001680Cucurbita moschata (Rifu)cmomedB886
MELO3C007199.2CmoCh03G013350Cucurbita moschata (Rifu)cmomedB695
MELO3C007199.2Lsi01G002260Bottle gourd (USVL1VR-Ls)lsimedB156
MELO3C007199.2Cp4.1LG19g06510Cucurbita pepo (Zucchini)cpemedB540
MELO3C007199.2Cp4.1LG10g05520Cucurbita pepo (Zucchini)cpemedB081
MELO3C007199.2CsGy6G035030Cucumber (Gy14) v2cgybmedB442
MELO3C007199.2ClCG01G023890Watermelon (Charleston Gray)medwcgB510
MELO3C007199.2Bhi07G000178Wax gourdmedwgoB676
MELO3C007199.2Carg15357Silver-seed gourdcarmedB0560
MELO3C007199.2Carg23111Silver-seed gourdcarmedB0943
MELO3C007199.2CsaV3_6G051040Cucumber (Chinese Long) v3cucmedB508
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C007199.2Watermelon (97103) v1medwmB554
MELO3C007199.2Cucumber (Gy14) v2cgybmedB070
MELO3C007199.2Cucurbita maxima (Rimu)cmamedB233
MELO3C007199.2Cucumber (Gy14) v1cgymedB376
MELO3C007199.2Cucurbita maxima (Rimu)cmamedB440
MELO3C007199.2Cucurbita maxima (Rimu)cmamedB563
MELO3C007199.2Cucurbita moschata (Rifu)cmomedB217
MELO3C007199.2Cucurbita moschata (Rifu)cmomedB429
MELO3C007199.2Cucurbita moschata (Rifu)cmomedB551
MELO3C007199.2Cucurbita pepo (Zucchini)cpemedB052
MELO3C007199.2Cucurbita pepo (Zucchini)cpemedB287
MELO3C007199.2Cucurbita pepo (Zucchini)cpemedB572
MELO3C007199.2Wild cucumber (PI 183967)cpimedB074
MELO3C007199.2Cucumber (Chinese Long) v2cumedB075
MELO3C007199.2Melon (DHL92) v3.6.1medmedB074
MELO3C007199.2Bottle gourd (USVL1VR-Ls)lsimedB239
MELO3C007199.2Watermelon (Charleston Gray)medwcgB518
MELO3C007199.2Watermelon (Charleston Gray)medwcgB541
MELO3C007199.2Watermelon (97103) v1medwmB549
MELO3C007199.2Watermelon (97103) v1medwmB561
MELO3C007199.2Silver-seed gourdcarmedB0157
MELO3C007199.2Silver-seed gourdcarmedB0809
MELO3C007199.2Cucumber (Chinese Long) v3cucmedB083
MELO3C007199.2Watermelon (97103) v2medwmbB507
MELO3C007199.2Watermelon (97103) v2medwmbB523
MELO3C007199.2Wax gourdmedwgoB628
MELO3C007199.2Wax gourdmedwgoB671