CsGy6G035030 (gene) Cucumber (Gy14) v2

NameCsGy6G035030
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr6 : 31014997 .. 31016253 (+)
   



The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTCGCTCTCGCTCTCGCTCTCTCTGTGTGTGTTCTTTTTTCTTGGATTTGAAAATCAATTGGCTTCCAAATTTCCATCAATGTCCATTCCTGAACTGCCATTTTCACCTTCTAATCCAAAGGTTCAGAGAGTGTCAAAATCCACTTCAGACAGATTGCTTCAGAAATTCTTCGATGCTACTGAATTTGGATTTGATTACGAGAGAAGTGGGCTCTGGTCTCCCCCTCTTCAACGCACTGTTTATTTAACTTCTTCGGGTCAAGTTCTCAATCAAACGGATTTACATACAAAACTTCAAACCGTCTTGAATTCTCGAAGTAGAACACATAAAAGTTGTTTCAAATTCAGAGTAAGCTGCTGCCTTTACCTCTTTTTTTGTTTCTCTTTTAATTTTGTTTTCTTTTTCACTATTGGCTTTAGATTTTATAAAATCCCAAATAATTTGTTCATATATTGCTTTAATTTTTGTGTTTTAGAATTAGATGTTTGCAGTTTAAATGTTGTAGGTGTTTTGGTGCTATGTGAAGCAAATCTGAAAGCTGGAATCTTTATTGCTTCTATGCCTTCAATTTTTCACTTAATGGGATGGATGATAATGGAGTTTCATAGTCCCAGCCAAAACAAAAGCAGAAGGGGTCCCCTAAAGAAGGAAAAAATAACCCATCCTATACAGTTCTTATTTTGTTTATTTTGTACAAGTTCGATATTGTTGATATAACATATTAATGTTGCTAATCCAAAGTTCAATCATATAACATCAATCAAATTTGAACTTCAACTCTTTCTTTTTTCCATGTGAATATGACACTATTACAATGACCAAGTTTAACTTTTTAGTCCCAATTACTTACTGTGGAGTGTTCGATCAATTATAACTTTGTTGGGTAAAATATGAATGAAATATCAATGCCCCATTTTAAGGAGTATAATATAAAATCAATAAAAAATTTGTAGGAAAGAGGAAAAAACAAAGAGGGGAGAAGAGGATTCGCCTCAAATTTGGAGCCACTGATAGCTGGGAACTATGATATGGCATCAGGTATCCTGTCATGTGGGAAAGCCCTTATAAAACAAACCCCTATCATTGGACTACTCTATTCCAAAATTATATGTATAATCAATAATGTAATACTTACCTTATTCTTGCATTTTCTTTATCATAGCAACAAATATCCAATGGCTACAATATAGCTAGTGGTTTAGTATTGTTGATTATTTCATGCACGCGTGAAAGTAGGTCTCTTAATAGATATTTA

mRNA sequence

TCTCGCTCTCGCTCTCGCTCTCTCTGTGTGTGTTCTTTTTTCTTGGATTTGAAAATCAATTGGCTTCCAAATTTCCATCAATGTCCATTCCTGAACTGCCATTTTCACCTTCTAATCCAAAGGTTCAGAGAGTGTCAAAATCCACTTCAGACAGATTGCTTCAGAAATTCTTCGATGCTACTGAATTTGGATTTGATTACGAGAGAAGTGGGCTCTGGTCTCCCCCTCTTCAACGCACTGTTTATTTAACTTCTTCGGGTCAAGTTCTCAATCAAACGGATTTACATACAAAACTTCAAACCGTCTTGAATTCTCGAAGTAGAACACATAAAAGTTGTTTCAAATTCAGAGTGTTTTGGTGCTATGTGAAGCAAATCTGAAAGCTGGAATCTTTATTGCTTCTATGCCTTCAATTTTTCACTTAATGGGATGGATGATAATGGAGTTTCATAGTCCCAGCCAAAACAAAAGCAGAAGGGGTCCCCTAAAGAAGGAAAAAATAACCCATCCTATACAGTTCTTATTTTGTTTATTTTGTACAAGTTCGATATTGTTGATATAACATATTAATGTTGCTAATCCAAAGTTCAATCATATAACATCAATCAAATTTGAACTTCAACTCTTTCTTTTTTCCATGTGAATATGACACTATTACAATGACCAAGTTTAACTTTTTAGTCCCAATTACTTACTGTGGAGTGTTCGATCAATTATAACTTTGTTGGGTAAAATATGAATGAAATATCAATGCCCCATTTTAAGGAGTATAATATAAAATCAATAAAAAATTTGTAGGAAAGAGGAAAAAACAAAGAGGGGAGAAGAGGATTCGCCTCAAATTTGGAGCCACTGATAGCTGGGAACTATGATATGGCATCAGGTATCCTGTCATGTGGGAAAGCCCTTATAAAACAAACCCCTATCATTGGACTACTCTATTCCAAAATTATATGTATAATCAATAATGTAATACTTACCTTATTCTTGCATTTTCTTTATCATAGCAACAAATATCCAATGGCTACAATATAGCTAGTGGTTTAGTATTGTTGATTATTTCATGCACGCGTGAAAGTAGGTCTCTTAATAGATATTTA

Coding sequence (CDS)

ATGTCCATTCCTGAACTGCCATTTTCACCTTCTAATCCAAAGGTTCAGAGAGTGTCAAAATCCACTTCAGACAGATTGCTTCAGAAATTCTTCGATGCTACTGAATTTGGATTTGATTACGAGAGAAGTGGGCTCTGGTCTCCCCCTCTTCAACGCACTGTTTATTTAACTTCTTCGGGTCAAGTTCTCAATCAAACGGATTTACATACAAAACTTCAAACCGTCTTGAATTCTCGAAGTAGAACACATAAAAGTTGTTTCAAATTCAGAGTGTTTTGGTGCTATGTGAAGCAAATCTGA

Protein sequence

MSIPELPFSPSNPKVQRVSKSTSDRLLQKFFDATEFGFDYERSGLWSPPLQRTVYLTSSGQVLNQTDLHTKLQTVLNSRSRTHKSCFKFRVFWCYVKQI
BLAST of CsGy6G035030 vs. NCBI nr
Match: KGN49322.1 (hypothetical protein Csa_6G519730 [Cucumis sativus])

HSP 1 Score: 205.3 bits (521), Expect = 9.6e-50
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0

Query: 1   MSIPELPFSPSNPKVQRVSKSTSDRLLQKFFDATEFGFDYERSGLWSPPLQRTVYLTSSG 60
           MSIPELPFSPSNPKVQRVSKSTSDRLLQKFFDATEFGFDYERSGLWSPPLQRTVYLTSSG
Sbjct: 1   MSIPELPFSPSNPKVQRVSKSTSDRLLQKFFDATEFGFDYERSGLWSPPLQRTVYLTSSG 60

Query: 61  QVLNQTDLHTKLQTVLNSRSRTHKSCFKFRVFWCYVKQI 100
           QVLNQTDLHTKLQTVLNSRSRTHKSCFKFRVFWCYVKQI
Sbjct: 61  QVLNQTDLHTKLQTVLNSRSRTHKSCFKFRVFWCYVKQI 99

BLAST of CsGy6G035030 vs. NCBI nr
Match: XP_008225225.1 (PREDICTED: uncharacterized protein LOC103324891 [Prunus mume])

HSP 1 Score: 109.0 bits (271), Expect = 9.4e-21
Identity = 49/86 (56.98%), Postives = 67/86 (77.91%), Query Frame = 0

Query: 10  PSNPKVQRVSKSTSDRLLQKFFDATEFGFDYERSGLWSPPLQRTVYLTSSGQVLNQTDLH 69
           P+ P VQ V KSTSDRLLQKFFDA EF FDYE+SGLWSPP++RTV+L+S G++  + ++ 
Sbjct: 25  PTAPMVQLVPKSTSDRLLQKFFDAAEFDFDYEQSGLWSPPVKRTVFLSSQGRIFTEQEML 84

Query: 70  TKLQTVLNSRSRTHKSCFKFRVFWCY 96
            KL T++++ + THK+C   R FWC+
Sbjct: 85  VKLSTLMDAPTSTHKAC--CRAFWCF 108

BLAST of CsGy6G035030 vs. NCBI nr
Match: XP_021813179.1 (uncharacterized protein LOC110756101 isoform X1 [Prunus avium])

HSP 1 Score: 105.5 bits (262), Expect = 1.0e-19
Identity = 48/85 (56.47%), Postives = 65/85 (76.47%), Query Frame = 0

Query: 10  PSNPKVQRVSKSTSDRLLQKFFDATEFGFDYERSGLWSPPLQRTVYLTSSGQVLNQTDLH 69
           P+ P VQ V KSTSDRLLQKFFDA EF FDYE+SGLWSPP++RTV+L+S G++  + ++ 
Sbjct: 25  PTAPMVQLVPKSTSDRLLQKFFDAAEFDFDYEQSGLWSPPVKRTVFLSSQGKIFTEQEML 84

Query: 70  TKLQTVLNSRSRTHKSCFKFRVFWC 95
            KL T++++ +  HK+C   R FWC
Sbjct: 85  AKLSTLMDAPTSKHKAC--CRAFWC 107

BLAST of CsGy6G035030 vs. NCBI nr
Match: PQQ03423.1 (uncharacterized protein Pyn_33883 [Prunus yedoensis var. nudiflora])

HSP 1 Score: 105.5 bits (262), Expect = 1.0e-19
Identity = 48/85 (56.47%), Postives = 65/85 (76.47%), Query Frame = 0

Query: 10  PSNPKVQRVSKSTSDRLLQKFFDATEFGFDYERSGLWSPPLQRTVYLTSSGQVLNQTDLH 69
           P+ P VQ V KSTSDRLLQKFFDA EF FDYE+SGLWSPP++RTV+L+S G++  + ++ 
Sbjct: 25  PTAPMVQLVPKSTSDRLLQKFFDAAEFDFDYEQSGLWSPPVKRTVFLSSQGRIFTEQEML 84

Query: 70  TKLQTVLNSRSRTHKSCFKFRVFWC 95
            KL T++++ +  HK+C   R FWC
Sbjct: 85  AKLSTLMDAPTSKHKAC--CRAFWC 107

BLAST of CsGy6G035030 vs. NCBI nr
Match: PQQ21819.1 (uncharacterized protein Pyn_19857 [Prunus yedoensis var. nudiflora])

HSP 1 Score: 105.5 bits (262), Expect = 1.0e-19
Identity = 48/85 (56.47%), Postives = 65/85 (76.47%), Query Frame = 0

Query: 10  PSNPKVQRVSKSTSDRLLQKFFDATEFGFDYERSGLWSPPLQRTVYLTSSGQVLNQTDLH 69
           P+ P VQ V KSTSDRLLQKFFDA EF FDYE+SGLWSPP++RTV+L+S G++  + ++ 
Sbjct: 25  PTAPMVQLVPKSTSDRLLQKFFDAAEFDFDYEQSGLWSPPVKRTVFLSSQGRIFTEQEML 84

Query: 70  TKLQTVLNSRSRTHKSCFKFRVFWC 95
            KL T++++ +  HK+C   R FWC
Sbjct: 85  AKLSTLMDAPTSKHKAC--CRAFWC 107

BLAST of CsGy6G035030 vs. TrEMBL
Match: tr|A0A0A0KLQ8|A0A0A0KLQ8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G519730 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 6.3e-50
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0

Query: 1   MSIPELPFSPSNPKVQRVSKSTSDRLLQKFFDATEFGFDYERSGLWSPPLQRTVYLTSSG 60
           MSIPELPFSPSNPKVQRVSKSTSDRLLQKFFDATEFGFDYERSGLWSPPLQRTVYLTSSG
Sbjct: 1   MSIPELPFSPSNPKVQRVSKSTSDRLLQKFFDATEFGFDYERSGLWSPPLQRTVYLTSSG 60

Query: 61  QVLNQTDLHTKLQTVLNSRSRTHKSCFKFRVFWCYVKQI 100
           QVLNQTDLHTKLQTVLNSRSRTHKSCFKFRVFWCYVKQI
Sbjct: 61  QVLNQTDLHTKLQTVLNSRSRTHKSCFKFRVFWCYVKQI 99

BLAST of CsGy6G035030 vs. TrEMBL
Match: tr|A0A2I4H1H8|A0A2I4H1H8_9ROSI (uncharacterized protein LOC109012687 isoform X1 OS=Juglans regia OX=51240 GN=LOC109012687 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 2.6e-19
Identity = 54/104 (51.92%), Postives = 74/104 (71.15%), Query Frame = 0

Query: 1   MSIPELPFSPSNP----------KVQRVSKSTSDRLLQKFFDATEFGFDYERSGLWSPPL 60
           MSIPE PFS S+P          +V+ VSK  SDRL+QKF+D +EFGFDYE+SGLWSPP+
Sbjct: 52  MSIPESPFSSSSPSPSLPQTSSGRVELVSKFVSDRLVQKFYDVSEFGFDYEQSGLWSPPV 111

Query: 61  QRTVYLTSSGQVLNQTDLHTKLQTVL--NSRSRTHKS-CFKFRV 92
           QRTV+++SSG++  + D+ +KL++ L  + R R H+S CF   V
Sbjct: 112 QRTVFMSSSGKIFTEADILSKLRSALQRHRRGRKHRSLCFNVLV 155

BLAST of CsGy6G035030 vs. TrEMBL
Match: tr|A0A2I4H1F6|A0A2I4H1F6_9ROSI (uncharacterized protein LOC109012687 isoform X4 OS=Juglans regia OX=51240 GN=LOC109012687 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 2.6e-19
Identity = 54/104 (51.92%), Postives = 74/104 (71.15%), Query Frame = 0

Query: 1   MSIPELPFSPSNP----------KVQRVSKSTSDRLLQKFFDATEFGFDYERSGLWSPPL 60
           MSIPE PFS S+P          +V+ VSK  SDRL+QKF+D +EFGFDYE+SGLWSPP+
Sbjct: 32  MSIPESPFSSSSPSPSLPQTSSGRVELVSKFVSDRLVQKFYDVSEFGFDYEQSGLWSPPV 91

Query: 61  QRTVYLTSSGQVLNQTDLHTKLQTVL--NSRSRTHKS-CFKFRV 92
           QRTV+++SSG++  + D+ +KL++ L  + R R H+S CF   V
Sbjct: 92  QRTVFMSSSGKIFTEADILSKLRSALQRHRRGRKHRSLCFNVLV 135

BLAST of CsGy6G035030 vs. TrEMBL
Match: tr|A0A2I4H1H1|A0A2I4H1H1_9ROSI (uncharacterized protein LOC109012687 isoform X3 OS=Juglans regia OX=51240 GN=LOC109012687 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 2.6e-19
Identity = 54/104 (51.92%), Postives = 74/104 (71.15%), Query Frame = 0

Query: 1   MSIPELPFSPSNP----------KVQRVSKSTSDRLLQKFFDATEFGFDYERSGLWSPPL 60
           MSIPE PFS S+P          +V+ VSK  SDRL+QKF+D +EFGFDYE+SGLWSPP+
Sbjct: 32  MSIPESPFSSSSPSPSLPQTSSGRVELVSKFVSDRLVQKFYDVSEFGFDYEQSGLWSPPV 91

Query: 61  QRTVYLTSSGQVLNQTDLHTKLQTVL--NSRSRTHKS-CFKFRV 92
           QRTV+++SSG++  + D+ +KL++ L  + R R H+S CF   V
Sbjct: 92  QRTVFMSSSGKIFTEADILSKLRSALQRHRRGRKHRSLCFNVLV 135

BLAST of CsGy6G035030 vs. TrEMBL
Match: tr|A0A2I4H1I2|A0A2I4H1I2_9ROSI (uncharacterized protein LOC109012687 isoform X2 OS=Juglans regia OX=51240 GN=LOC109012687 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 2.6e-19
Identity = 54/104 (51.92%), Postives = 74/104 (71.15%), Query Frame = 0

Query: 1   MSIPELPFSPSNP----------KVQRVSKSTSDRLLQKFFDATEFGFDYERSGLWSPPL 60
           MSIPE PFS S+P          +V+ VSK  SDRL+QKF+D +EFGFDYE+SGLWSPP+
Sbjct: 32  MSIPESPFSSSSPSPSLPQTSSGRVELVSKFVSDRLVQKFYDVSEFGFDYEQSGLWSPPV 91

Query: 61  QRTVYLTSSGQVLNQTDLHTKLQTVL--NSRSRTHKS-CFKFRV 92
           QRTV+++SSG++  + D+ +KL++ L  + R R H+S CF   V
Sbjct: 92  QRTVFMSSSGKIFTEADILSKLRSALQRHRRGRKHRSLCFNVLV 135

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN49322.19.6e-50100.00hypothetical protein Csa_6G519730 [Cucumis sativus][more]
XP_008225225.19.4e-2156.98PREDICTED: uncharacterized protein LOC103324891 [Prunus mume][more]
XP_021813179.11.0e-1956.47uncharacterized protein LOC110756101 isoform X1 [Prunus avium][more]
PQQ03423.11.0e-1956.47uncharacterized protein Pyn_33883 [Prunus yedoensis var. nudiflora][more]
PQQ21819.11.0e-1956.47uncharacterized protein Pyn_19857 [Prunus yedoensis var. nudiflora][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0KLQ8|A0A0A0KLQ8_CUCSA6.3e-50100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G519730 PE=4 SV=1[more]
tr|A0A2I4H1H8|A0A2I4H1H8_9ROSI2.6e-1951.92uncharacterized protein LOC109012687 isoform X1 OS=Juglans regia OX=51240 GN=LOC... [more]
tr|A0A2I4H1F6|A0A2I4H1F6_9ROSI2.6e-1951.92uncharacterized protein LOC109012687 isoform X4 OS=Juglans regia OX=51240 GN=LOC... [more]
tr|A0A2I4H1H1|A0A2I4H1H1_9ROSI2.6e-1951.92uncharacterized protein LOC109012687 isoform X3 OS=Juglans regia OX=51240 GN=LOC... [more]
tr|A0A2I4H1I2|A0A2I4H1I2_9ROSI2.6e-1951.92uncharacterized protein LOC109012687 isoform X2 OS=Juglans regia OX=51240 GN=LOC... [more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy6G035030.1CsGy6G035030.1mRNA


Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availablePANTHERPTHR34287FAMILY NOT NAMEDcoord: 4..95
NoneNo IPR availablePANTHERPTHR34287:SF2SUBFAMILY NOT NAMEDcoord: 4..95

The following gene(s) are paralogous to this gene:

None