Bhi07G000178 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi07G000178
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	BnaCnng70620D protein
Location	chr7 : 9929168 .. 9930293 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATATTCCTTACCCATCACATTTATAAACCTCTGAAAAAGAACACCACCTTTGTCTTCTTCAAACACTCGTCCCCCTTTTTAATTTTTATTTTTTTTTTTTTTATAAAAACATTATCTTATCTCTCTCTTCTTTTCTTTCAAATTCAATTGGGTTCCAAATTTCCATCAATGTCCATCCCCCAACTGCCATTTTCACCTTCTAATTTCATTGCCACTTCCAATAATAATACTCCCAAGGTTCAGAGGGTATCCAAATCCACTTCAGACAGATTGCTTCAGAAATTCTTCGATGCCACTGAATTTGGATTCGATTACGAAACAAGTGGCCTTTGGTCTCCCCCTCTTCAACGCAGTGTTTATTTGAGCTCTTCGGGTCAAGTTTTCAATCAAACGGATTTGCATACCAAACTTCAGACGGTGTTGAATTCTCGTAGAAGAAGACATAAAAGTTGTTTCAAATTCAGAGTAAGCTGCTGCCTCTGCCTACCCTCTTTTTTCTCTTTTAATTTCTTTCTCTCTTTCGCTTTACATTTGGTACTTTGGTTTCAGATAATCTCTTCATATATTGCTTTCTGTTTAGAATTAGATGTGTGCAGTTTATATGTTGTAGGTGTTTTGGTGCTCTGTGAGGCCCAAAGCTGCAATCTGTCATCTTTAGTGCTATGCTTCCATTTTTGCTTAATGGGGATCGATGATAATGGAGTTTCAAAGTCCCAGCGTAGAAAACAAAAGCAGAGGGGGGCCCTCTAGAAGAAAAAAGATCCATCCCATACAGTTCCTATTTTGTACAAGTTCAATAGTTGATATAACTGATTGATTGTTGCTGATCCAAAGTTCAAAACATGAATCTCTTTGACCTGTTCACTAACACCCATCAACTCTTTCTTTTTCCCCTTATGAATATGACATTATTACAATGAAGAAGTTTACTGTTGAGTTATGTTTATAATGGGGGTTTGAATTATAACTTCGTTGGGTGAAATTACATGGAATCCAATGCCACATTTTAAGGAAGACAATATAAAATCAAAACTTGTGGGAAAGTGGAAAAAAACAAAGAGGGCATAAGAGGGTGAATTTAGATTAACGTAGATCCGCCTCAAATTTGGAGCCACTGATAGCCGGG

mRNA sequence

ATATTCCTTACCCATCACATTTATAAACCTCTGAAAAAGAACACCACCTTTGTCTTCTTCAAACACTCGTCCCCCTTTTTAATTTTTATTTTTTTTTTTTTTATAAAAACATTATCTTATCTCTCTCTTCTTTTCTTTCAAATTCAATTGGGTTCCAAATTTCCATCAATGTCCATCCCCCAACTGCCATTTTCACCTTCTAATTTCATTGCCACTTCCAATAATAATACTCCCAAGGTTCAGAGGGTATCCAAATCCACTTCAGACAGATTGCTTCAGAAATTCTTCGATGCCACTGAATTTGGATTCGATTACGAAACAAGTGGCCTTTGGTCTCCCCCTCTTCAACGCAGTGTTTATTTGAGCTCTTCGGGTCAAGTTTTCAATCAAACGGATTTGCATACCAAACTTCAGACGGTGTTGAATTCTCGTAGAAGAAGACATAAAAGTTGTTTCAAATTCAGAGTGTTTTGGTGCTCTGTGAGGCCCAAAGCTGCAATCTGTCATCTTTAGTGCTATGCTTCCATTTTTGCTTAATGGGGATCGATGATAATGGAGTTTCAAAGTCCCAGCGTAGAAAACAAAAGCAGAGGGGGGCCCTCTAGAAGAAAAAAGATCCATCCCATACAGTTCCTATTTTGTACAAGTTCAATAGTTGATATAACTGATTGATTGTTGCTGATCCAAAGTTCAAAACATGAATCTCTTTGACCTGTTCACTAACACCCATCAACTCTTTCTTTTTCCCCTTATGAATATGACATTATTACAATGAAGAAGTTTACTGTTGAGTTATGTTTATAATGGGGGTTTGAATTATAACTTCGTTGGGTGAAATTACATGGAATCCAATGCCACATTTTAAGGAAGACAATATAAAATCAAAACTTGTGGGAAAGTGGAAAAAAACAAAGAGGGCATAAGAGGGTGAATTTAGATTAACGTAGATCCGCCTCAAATTTGGAGCCACTGATAGCCGGG

Coding sequence (CDS)

ATGTCCATCCCCCAACTGCCATTTTCACCTTCTAATTTCATTGCCACTTCCAATAATAATACTCCCAAGGTTCAGAGGGTATCCAAATCCACTTCAGACAGATTGCTTCAGAAATTCTTCGATGCCACTGAATTTGGATTCGATTACGAAACAAGTGGCCTTTGGTCTCCCCCTCTTCAACGCAGTGTTTATTTGAGCTCTTCGGGTCAAGTTTTCAATCAAACGGATTTGCATACCAAACTTCAGACGGTGTTGAATTCTCGTAGAAGAAGACATAAAAGTTGTTTCAAATTCAGAGTGTTTTGGTGCTCTGTGAGGCCCAAAGCTGCAATCTGTCATCTTTAG

Protein sequence

MSIPQLPFSPSNFIATSNNNTPKVQRVSKSTSDRLLQKFFDATEFGFDYETSGLWSPPLQRSVYLSSSGQVFNQTDLHTKLQTVLNSRRRRHKSCFKFRVFWCSVRPKAAICHL

Homology

[Close]

BLAST of Bhi07G000178 vs. TrEMBL
Match: tr|A0A0A0KLQ8|A0A0A0KLQ8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G519730 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 3.6e-41
Identity = 88/106 (83.02%), Postives = 92/106 (86.79%), Query Frame = 0


Query: 1   MSIPQLPFSPSNFIATSNNNTPKVQRVSKSTSDRLLQKFFDATEFGFDYETSGLWSPPLQ 60
           MSIP+LPFSPSN         PKVQRVSKSTSDRLLQKFFDATEFGFDYE SGLWSPPLQ
Sbjct: 1   MSIPELPFSPSN---------PKVQRVSKSTSDRLLQKFFDATEFGFDYERSGLWSPPLQ 60

Query: 61  RSVYLSSSGQVFNQTDLHTKLQTVLNSRRRRHKSCFKFRVFWCSVR 107
           R+VYL+SSGQV NQTDLHTKLQTVLNSR R HKSCFKFRVFWC V+
Sbjct: 61  RTVYLTSSGQVLNQTDLHTKLQTVLNSRSRTHKSCFKFRVFWCYVK 97

[Close]

BLAST of Bhi07G000178 vs. TrEMBL
Match: tr|D7TJP6|D7TJP6_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_10s0003g01630 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 6.7e-19
Identity = 54/96 (56.25%), Postives = 72/96 (75.00%), Query Frame = 0


Query: 9   SPSNFIATSNNNTPKVQRVSKSTSDRLLQKFFDATEFGFDYETSGLWSPPLQRSVYLSSS 68
           SPS   A+ + +  +VQ VSKS SDRLLQKFFD++EF FDYE SGLWSPP++RSV+LSS 
Sbjct: 7   SPSLPGASPSPSPLRVQVVSKSVSDRLLQKFFDSSEFDFDYEQSGLWSPPIRRSVFLSSP 66

Query: 69  GQVFNQTDLHTKLQTVLNSRR-RRHKSCFKFRVFWC 104
           G++FN+ ++  KL++V  SRR R+ + C  F  FWC
Sbjct: 67  GKIFNEHEMLAKLKSVTGSRRGRKRRVC--FYAFWC 100

[Close]

BLAST of Bhi07G000178 vs. TrEMBL
Match: tr|A0A2I4H1H8|A0A2I4H1H8_9ROSI (uncharacterized protein LOC109012687 isoform X1 OS=Juglans regia OX=51240 GN=LOC109012687 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 8.7e-19
Identity = 55/110 (50.00%), Postives = 78/110 (70.91%), Query Frame = 0


Query: 1   MSIPQLPFSPSN-FIATSNNNTPKVQRVSKSTSDRLLQKFFDATEFGFDYETSGLWSPPL 60
           MSIP+ PFS S+   +    ++ +V+ VSK  SDRL+QKF+D +EFGFDYE SGLWSPP+
Sbjct: 52  MSIPESPFSSSSPSPSLPQTSSGRVELVSKFVSDRLVQKFYDVSEFGFDYEQSGLWSPPV 111

Query: 61  QRSVYLSSSGQVFNQTDLHTKLQTVLNSRR--RRHKS-CFKFRVFWCSVR 107
           QR+V++SSSG++F + D+ +KL++ L   R  R+H+S CF   V    VR
Sbjct: 112 QRTVFMSSSGKIFTEADILSKLRSALQRHRRGRKHRSLCFNVLVCCFRVR 161

[Close]

BLAST of Bhi07G000178 vs. TrEMBL
Match: tr|A0A2I4H1F6|A0A2I4H1F6_9ROSI (uncharacterized protein LOC109012687 isoform X4 OS=Juglans regia OX=51240 GN=LOC109012687 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 8.7e-19
Identity = 55/110 (50.00%), Postives = 78/110 (70.91%), Query Frame = 0


Query: 1   MSIPQLPFSPSN-FIATSNNNTPKVQRVSKSTSDRLLQKFFDATEFGFDYETSGLWSPPL 60
           MSIP+ PFS S+   +    ++ +V+ VSK  SDRL+QKF+D +EFGFDYE SGLWSPP+
Sbjct: 32  MSIPESPFSSSSPSPSLPQTSSGRVELVSKFVSDRLVQKFYDVSEFGFDYEQSGLWSPPV 91

Query: 61  QRSVYLSSSGQVFNQTDLHTKLQTVLNSRR--RRHKS-CFKFRVFWCSVR 107
           QR+V++SSSG++F + D+ +KL++ L   R  R+H+S CF   V    VR
Sbjct: 92  QRTVFMSSSGKIFTEADILSKLRSALQRHRRGRKHRSLCFNVLVCCFRVR 141

[Close]

BLAST of Bhi07G000178 vs. TrEMBL
Match: tr|A0A2I4H1H1|A0A2I4H1H1_9ROSI (uncharacterized protein LOC109012687 isoform X3 OS=Juglans regia OX=51240 GN=LOC109012687 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 8.7e-19
Identity = 55/110 (50.00%), Postives = 78/110 (70.91%), Query Frame = 0


Query: 1   MSIPQLPFSPSN-FIATSNNNTPKVQRVSKSTSDRLLQKFFDATEFGFDYETSGLWSPPL 60
           MSIP+ PFS S+   +    ++ +V+ VSK  SDRL+QKF+D +EFGFDYE SGLWSPP+
Sbjct: 32  MSIPESPFSSSSPSPSLPQTSSGRVELVSKFVSDRLVQKFYDVSEFGFDYEQSGLWSPPV 91

Query: 61  QRSVYLSSSGQVFNQTDLHTKLQTVLNSRR--RRHKS-CFKFRVFWCSVR 107
           QR+V++SSSG++F + D+ +KL++ L   R  R+H+S CF   V    VR
Sbjct: 92  QRTVFMSSSGKIFTEADILSKLRSALQRHRRGRKHRSLCFNVLVCCFRVR 141

[Close]

BLAST of Bhi07G000178 vs. NCBI nr
Match: KGN49322.1 (hypothetical protein Csa_6G519730 [Cucumis sativus])

HSP 1 Score: 176.4 bits (446), Expect = 5.5e-41
Identity = 88/106 (83.02%), Postives = 92/106 (86.79%), Query Frame = 0


Query: 1   MSIPQLPFSPSNFIATSNNNTPKVQRVSKSTSDRLLQKFFDATEFGFDYETSGLWSPPLQ 60
           MSIP+LPFSPSN         PKVQRVSKSTSDRLLQKFFDATEFGFDYE SGLWSPPLQ
Sbjct: 1   MSIPELPFSPSN---------PKVQRVSKSTSDRLLQKFFDATEFGFDYERSGLWSPPLQ 60

Query: 61  RSVYLSSSGQVFNQTDLHTKLQTVLNSRRRRHKSCFKFRVFWCSVR 107
           R+VYL+SSGQV NQTDLHTKLQTVLNSR R HKSCFKFRVFWC V+
Sbjct: 61  RTVYLTSSGQVLNQTDLHTKLQTVLNSRSRTHKSCFKFRVFWCYVK 97

[Close]

BLAST of Bhi07G000178 vs. NCBI nr
Match: XP_021813179.1 (uncharacterized protein LOC110756101 isoform X1 [Prunus avium])

HSP 1 Score: 106.3 bits (264), Expect = 7.0e-20
Identity = 49/83 (59.04%), Postives = 64/83 (77.11%), Query Frame = 0


Query: 22  PKVQRVSKSTSDRLLQKFFDATEFGFDYETSGLWSPPLQRSVYLSSSGQVFNQTDLHTKL 81
           P VQ V KSTSDRLLQKFFDA EF FDYE SGLWSPP++R+V+LSS G++F + ++  KL
Sbjct: 28  PMVQLVPKSTSDRLLQKFFDAAEFDFDYEQSGLWSPPVKRTVFLSSQGKIFTEQEMLAKL 87

Query: 82  QTVLNSRRRRHKSCFKFRVFWCS 105
            T++++   +HK+C   R FWCS
Sbjct: 88  STLMDAPTSKHKAC--CRAFWCS 108

[Close]

BLAST of Bhi07G000178 vs. NCBI nr
Match: PQQ03423.1 (uncharacterized protein Pyn_33883 [Prunus yedoensis var. nudiflora])

HSP 1 Score: 106.3 bits (264), Expect = 7.0e-20
Identity = 49/83 (59.04%), Postives = 64/83 (77.11%), Query Frame = 0


Query: 22  PKVQRVSKSTSDRLLQKFFDATEFGFDYETSGLWSPPLQRSVYLSSSGQVFNQTDLHTKL 81
           P VQ V KSTSDRLLQKFFDA EF FDYE SGLWSPP++R+V+LSS G++F + ++  KL
Sbjct: 28  PMVQLVPKSTSDRLLQKFFDAAEFDFDYEQSGLWSPPVKRTVFLSSQGRIFTEQEMLAKL 87

Query: 82  QTVLNSRRRRHKSCFKFRVFWCS 105
            T++++   +HK+C   R FWCS
Sbjct: 88  STLMDAPTSKHKAC--CRAFWCS 108

[Close]

BLAST of Bhi07G000178 vs. NCBI nr
Match: PQQ21819.1 (uncharacterized protein Pyn_19857 [Prunus yedoensis var. nudiflora])

HSP 1 Score: 106.3 bits (264), Expect = 7.0e-20
Identity = 49/83 (59.04%), Postives = 64/83 (77.11%), Query Frame = 0


Query: 22  PKVQRVSKSTSDRLLQKFFDATEFGFDYETSGLWSPPLQRSVYLSSSGQVFNQTDLHTKL 81
           P VQ V KSTSDRLLQKFFDA EF FDYE SGLWSPP++R+V+LSS G++F + ++  KL
Sbjct: 28  PMVQLVPKSTSDRLLQKFFDAAEFDFDYEQSGLWSPPVKRTVFLSSQGRIFTEQEMLAKL 87

Query: 82  QTVLNSRRRRHKSCFKFRVFWCS 105
            T++++   +HK+C   R FWCS
Sbjct: 88  STLMDAPTSKHKAC--CRAFWCS 108

[Close]

BLAST of Bhi07G000178 vs. NCBI nr
Match: XP_008225225.1 (PREDICTED: uncharacterized protein LOC103324891 [Prunus mume])

HSP 1 Score: 103.6 bits (257), Expect = 4.5e-19
Identity = 48/82 (58.54%), Postives = 62/82 (75.61%), Query Frame = 0


Query: 22  PKVQRVSKSTSDRLLQKFFDATEFGFDYETSGLWSPPLQRSVYLSSSGQVFNQTDLHTKL 81
           P VQ V KSTSDRLLQKFFDA EF FDYE SGLWSPP++R+V+LSS G++F + ++  KL
Sbjct: 28  PMVQLVPKSTSDRLLQKFFDAAEFDFDYEQSGLWSPPVKRTVFLSSQGRIFTEQEMLVKL 87

Query: 82  QTVLNSRRRRHKSCFKFRVFWC 104
            T++++    HK+C   R FWC
Sbjct: 88  STLMDAPTSTHKAC--CRAFWC 107

The following BLAST results are available for this feature:

BLAST of Bhi07G000178 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Bhi07G000178 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Bhi07G000178 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KLQ8\|A0A0A0KLQ8_CUCSA	3.6e-41	83.02	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G519730 PE=4 SV=1	[more]
tr\|D7TJP6\|D7TJP6_VITVI	6.7e-19	56.25	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_10s0003g01630 PE=4 SV=...	[more]
tr\|A0A2I4H1H8\|A0A2I4H1H8_9ROSI	8.7e-19	50.00	uncharacterized protein LOC109012687 isoform X1 OS=Juglans regia OX=51240 GN=LOC...	[more]
tr\|A0A2I4H1F6\|A0A2I4H1F6_9ROSI	8.7e-19	50.00	uncharacterized protein LOC109012687 isoform X4 OS=Juglans regia OX=51240 GN=LOC...	[more]
tr\|A0A2I4H1H1\|A0A2I4H1H1_9ROSI	8.7e-19	50.00	uncharacterized protein LOC109012687 isoform X3 OS=Juglans regia OX=51240 GN=LOC...	[more]

BLAST of Bhi07G000178 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN49322.1	5.5e-41	83.02	hypothetical protein Csa_6G519730 [Cucumis sativus]	[more]
XP_021813179.1	7.0e-20	59.04	uncharacterized protein LOC110756101 isoform X1 [Prunus avium]	[more]
PQQ03423.1	7.0e-20	59.04	uncharacterized protein Pyn_33883 [Prunus yedoensis var. nudiflora]	[more]
PQQ21819.1	7.0e-20	59.04	uncharacterized protein Pyn_19857 [Prunus yedoensis var. nudiflora]	[more]
XP_008225225.1	4.5e-19	58.54	PREDICTED: uncharacterized protein LOC103324891 [Prunus mume]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi07M000178	Bhi07M000178	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34287	FAMILY NOT NAMED	coord: 18..104
None	No IPR available	PANTHER	PTHR34287:SF2	SUBFAMILY NOT NAMED	coord: 18..104

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Bhi07G000178	Csa6G519730	Cucumber (Chinese Long) v2	cuwgoB642
Bhi07G000178	MELO3C007199	Melon (DHL92) v3.5.1	mewgoB668
Bhi07G000178	ClCG01G023890	Watermelon (Charleston Gray)	wcgwgoB248
Bhi07G000178	CSPI06G35540	Wild cucumber (PI 183967)	cpiwgoB649
Bhi07G000178	Cucsa.047110	Cucumber (Gy14) v1	cgywgoB030
Bhi07G000178	CmaCh07G001730	Cucurbita maxima (Rimu)	cmawgoB1083
Bhi07G000178	CmaCh03G013340	Cucurbita maxima (Rimu)	cmawgoB0810
Bhi07G000178	CmoCh07G001680	Cucurbita moschata (Rifu)	cmowgoB1077
Bhi07G000178	CmoCh03G013350	Cucurbita moschata (Rifu)	cmowgoB0806
Bhi07G000178	Lsi01G002260	Bottle gourd (USVL1VR-Ls)	lsiwgoB196
Bhi07G000178	Cp4.1LG10g05520	Cucurbita pepo (Zucchini)	cpewgoB0110
Bhi07G000178	Cp4.1LG19g06510	Cucurbita pepo (Zucchini)	cpewgoB0621
Bhi07G000178	CsGy6G035030	Cucumber (Gy14) v2	cgybwgoB611
Bhi07G000178	MELO3C007199.2	Melon (DHL92) v3.6.1	medwgoB676
Bhi07G000178	Carg15357	Silver-seed gourd	carwgoB0660
Bhi07G000178	Carg23111	Silver-seed gourd	carwgoB1110
Bhi07G000178	CsaV3_6G051040	Cucumber (Chinese Long) v3	cucwgoB662

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi07G000178	Watermelon (97103) v2	wgowmbB510
Bhi07G000178	Watermelon (97103) v1	wgowmB557