MELO3C006533 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C006533
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionFerredoxin-1
Locationchr6 : 3961409 .. 3962149 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GCTGTGAATCTGTGATGGGGCCATGCTTGAACTCAGAACCTTATCTCTTCATCAACGCCCTCGAATGGTCACAACCTCACAAATTACCTCCTTTTCAAATTCATCCCTAAGCAGAGAAAAGAAAACAATGGCAACTCTTCATTTTGTTCCTTCCGCTTTCTCCCTACCAAAACAAAAGCAACCCATCAAGCTTTCCTCGGTCAAACCCACTACTCACATAAGCTGCTCACGACGGCGCTTGGTGGTCCGGTCGTACAAAGTAGTGATTGAGCACGAGGGGCAGACCACCGAGCTTGAGGTCGATCCCGACGAGAGCATATTGAGCAGTGCATTGGACAATGGCTTAGAAATTCCTCACGATTGCAAGCTTGGAGTTTGCATGACTTGCCCTGCTCGCCTTGTCAGTGGCACCGTCGACCAAAGCGAAGGTATGTTGAGCGATGACGTCGTGGAACAAGGCTATTCGCTTCTGTGCGTGGCTTATCCTCGCTCAGATTGCCACATTAAAACCATCCCTGAGGAGGAATTGCTGGCACTTCAATTAGCGACGGCTAATGACTAAAATCTGAGTACTTCTTCGGATGATTTTGTAGATTTAATTCTTGTTTAGTTTATAACTATATTGAAATCAATCTATCTGGGATGTTGTCTCTTTTGGCTGTTGTTTGGTCATTTCGGTATAATGATAAATCTCTTGATTTGATTCCAGTCAGTGGCAGATGGAAATGGATGTATGTTGTT

mRNA sequence

GCTGTGAATCTGTGATGGGGCCATGCTTGAACTCAGAACCTTATCTCTTCATCAACGCCCTCGAATGGTCACAACCTCACAAATTACCTCCTTTTCAAATTCATCCCTAAGCAGAGAAAAGAAAACAATGGCAACTCTTCATTTTGTTCCTTCCGCTTTCTCCCTACCAAAACAAAAGCAACCCATCAAGCTTTCCTCGGTCAAACCCACTACTCACATAAGCTGCTCACGACGGCGCTTGGTGGTCCGGTCGTACAAAGTAGTGATTGAGCACGAGGGGCAGACCACCGAGCTTGAGGTCGATCCCGACGAGAGCATATTGAGCAGTGCATTGGACAATGGCTTAGAAATTCCTCACGATTGCAAGCTTGGAGTTTGCATGACTTGCCCTGCTCGCCTTGTCAGTGGCACCGTCGACCAAAGCGAAGGTATGTTGAGCGATGACGTCGTGGAACAAGGCTATTCGCTTCTGTGCGTGGCTTATCCTCGCTCAGATTGCCACATTAAAACCATCCCTGAGGAGGAATTGCTGGCACTTCAATTAGCGACGGCTAATGACTAAAATCTGAGTACTTCTTCGGATGATTTTGTAGATTTAATTCTTGTTTAGTTTATAACTATATTGAAATCAATCTATCTGGGATGTTGTCTCTTTTGGCTGTTGTTTGGTCATTTCGGTATAATGATAAATCTCTTGATTTGATTCCAGTCAGTGGCAGATGGAAATGGATGTATGTTGTT

Coding sequence (CDS)

ATGCTTGAACTCAGAACCTTATCTCTTCATCAACGCCCTCGAATGGTCACAACCTCACAAATTACCTCCTTTTCAAATTCATCCCTAAGCAGAGAAAAGAAAACAATGGCAACTCTTCATTTTGTTCCTTCCGCTTTCTCCCTACCAAAACAAAAGCAACCCATCAAGCTTTCCTCGGTCAAACCCACTACTCACATAAGCTGCTCACGACGGCGCTTGGTGGTCCGGTCGTACAAAGTAGTGATTGAGCACGAGGGGCAGACCACCGAGCTTGAGGTCGATCCCGACGAGAGCATATTGAGCAGTGCATTGGACAATGGCTTAGAAATTCCTCACGATTGCAAGCTTGGAGTTTGCATGACTTGCCCTGCTCGCCTTGTCAGTGGCACCGTCGACCAAAGCGAAGGTATGTTGAGCGATGACGTCGTGGAACAAGGCTATTCGCTTCTGTGCGTGGCTTATCCTCGCTCAGATTGCCACATTAAAACCATCCCTGAGGAGGAATTGCTGGCACTTCAATTAGCGACGGCTAATGACTAA

Protein sequence

MLELRTLSLHQRPRMVTTSQITSFSNSSLSREKKTMATLHFVPSAFSLPKQKQPIKLSSVKPTTHISCSRRRLVVRSYKVVIEHEGQTTELEVDPDESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVVEQGYSLLCVAYPRSDCHIKTIPEEELLALQLATAND*
Homology
[Close]
BLAST of MELO3C006533 vs. Swiss-Prot
Match: FER1_DESMC (Ferredoxin-1 OS=Desmonostoc muscorum PE=1 SV=2)

HSP 1 Score: 97.1 bits (240), Expect = 2.2e-19
Identity = 48/94 (51.06%), Postives = 62/94 (65.96%), Query Frame = 1 

Query: 78  YKV-VIEHEGQTTELEVDPDESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQS-E 137
           YKV +++ EG  T ++V  DE IL  A D GL++P+ C+ G C TC  ++VSGTVDQS +
Sbjct: 5   YKVTLVDQEGTETTIDVPDDEYILDIAEDQGLDLPYSCRAGACSTCAGKIVSGTVDQSDQ 64

Query: 138 GMLSDDVVEQGYSLLCVAYPRSDCHIKTIPEEEL 170
             L DD +E+GY L CVAYP SD  I+T  EE+L
Sbjct: 65  SFLDDDQIEKGYVLTCVAYPTSDLKIETHKEEDL 98

[Close]
BLAST of MELO3C006533 vs. Swiss-Prot
Match: FER2_SYNP6 (Ferredoxin-2 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=petF2 PE=3 SV=2)

HSP 1 Score: 96.7 bits (239), Expect = 2.8e-19
Identity = 47/98 (47.96%), Postives = 65/98 (66.33%), Query Frame = 1 

Query: 77  SYKVVIEHEGQTTELEVDPDESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEG 136
           +Y+V + ++GQ+     D D+S+L SA   G+++P  C  GVC TC AR++SG VDQ + 
Sbjct: 3   TYQVEVIYQGQSQTFTADSDQSVLDSAQAAGVDLPASCLTGVCTTCAARILSGEVDQPDA 62

Query: 137 M-LSDDVVEQGYSLLCVAYPRSDCHIKTIPEEELLALQ 174
           M +  +  +QGY+LLCVAYPRSD  I+T  E+EL ALQ
Sbjct: 63  MGVGPEPAKQGYTLLCVAYPRSDLKIETHKEDELYALQ 100

[Close]
BLAST of MELO3C006533 vs. Swiss-Prot
Match: FER_MASLA (Ferredoxin OS=Mastigocladus laminosus GN=petF PE=1 SV=2)

HSP 1 Score: 96.3 bits (238), Expect = 3.7e-19
Identity = 48/96 (50.00%), Postives = 62/96 (64.58%), Query Frame = 1 

Query: 77  SYKVVI--EHEGQTTELEVDPDESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQS 136
           +YKV +  E EG    +EV  D+ IL +A + G+++P+ C+ G C TC  +L+SGTVDQS
Sbjct: 3   TYKVTLINEAEGLNKTIEVPDDQYILDAAEEAGIDLPYSCRAGACSTCAGKLISGTVDQS 62

Query: 137 -EGMLSDDVVEQGYSLLCVAYPRSDCHIKTIPEEEL 170
            +  L DD +E GY L CVAYP SDC I+T  EEEL
Sbjct: 63  DQSFLDDDQIEAGYVLTCVAYPTSDCVIETHKEEEL 98

[Close]
BLAST of MELO3C006533 vs. Swiss-Prot
Match: FER_CHLFR (Ferredoxin OS=Chlorogloeopsis fritschii PE=1 SV=2)

HSP 1 Score: 95.1 bits (235), Expect = 8.2e-19
Identity = 48/96 (50.00%), Postives = 61/96 (63.54%), Query Frame = 1 

Query: 77  SYKVVI--EHEGQTTELEVDPDESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQS 136
           +YKV +  + EG    +EVD D  IL +A + GL++P+ C+ G C TC  ++ SGTVDQS
Sbjct: 3   TYKVTLINDAEGLNQTIEVDDDTYILDAAEEAGLDLPYSCRAGACSTCAGKIKSGTVDQS 62

Query: 137 -EGMLSDDVVEQGYSLLCVAYPRSDCHIKTIPEEEL 170
            +  L DD +E GY L CVAYP SDC I+T  EEEL
Sbjct: 63  DQSFLDDDQIEAGYVLTCVAYPTSDCTIETHKEEEL 98

[Close]
BLAST of MELO3C006533 vs. Swiss-Prot
Match: FER1_LEPBY (Ferredoxin-1 OS=Leptolyngbya boryana GN=petF1 PE=1 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.8e-18
Identity = 46/96 (47.92%), Postives = 61/96 (63.54%), Query Frame = 1 

Query: 77  SYKVVI--EHEGQTTELEVDPDESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQS 136
           S+KV +  E EG  T +EV  DE IL +A + G+++P+ C+ G C TC  ++ +GTVDQS
Sbjct: 3   SFKVTLINETEGLNTTIEVPDDEYILDAAEEQGIDLPYSCRAGACSTCAGKITAGTVDQS 62

Query: 137 -EGMLSDDVVEQGYSLLCVAYPRSDCHIKTIPEEEL 170
            +  L DD ++ GY L CVAYP SDC I T  EE+L
Sbjct: 63  DQSFLDDDQIQAGYVLTCVAYPTSDCTILTHQEEDL 98

[Close]
BLAST of MELO3C006533 vs. TrEMBL
Match: A0A0A0L4U6_CUCSA (Ferredoxin-1 OS=Cucumis sativus GN=Csa_3G146700 PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 1.4e-73
Identity = 141/144 (97.92%), Postives = 142/144 (98.61%), Query Frame = 1 

Query: 36  MATLHFVPSAFSLPKQKQPIKLSSVKPTTHISCSRRRLVVRSYKVVIEHEGQTTELEVDP 95
           MATLHFVPSAFSLPKQKQPIKLSSV+PTT ISCSRRRLVVRSYKVVIEHEGQTTELEVDP
Sbjct: 1   MATLHFVPSAFSLPKQKQPIKLSSVRPTTQISCSRRRLVVRSYKVVIEHEGQTTELEVDP 60

Query: 96  DESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVVEQGYSLLCVAYP 155
           DESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVV QGYSLLCVAYP
Sbjct: 61  DESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVVAQGYSLLCVAYP 120

Query: 156 RSDCHIKTIPEEELLALQLATAND 180
           RSDCHIKTIPEEELLALQLATAND
Sbjct: 121 RSDCHIKTIPEEELLALQLATAND 144

[Close]
BLAST of MELO3C006533 vs. TrEMBL
Match: W9R8L4_9ROSA (Ferredoxin-3 OS=Morus notabilis GN=L484_004463 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 1.8e-52
Identity = 107/146 (73.29%), Postives = 127/146 (86.99%), Query Frame = 1 

Query: 36  MATLHFVPS-AFSLPKQKQPIKLSSVKPTTHISCSRRR-LVVRSYKVVIEHEGQTTELEV 95
           MATLHF PS +FSL +Q+ P KL S    + ++  RRR L VRSYKVVIEHEGQ+TELEV
Sbjct: 1   MATLHFTPSPSFSLTRQRHPTKLFSA---SRLNLRRRRSLTVRSYKVVIEHEGQSTELEV 60

Query: 96  DPDESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVVEQGYSLLCVA 155
           DPDE+ILS ALD+GL +PHDCKLGVCMTCPA+L+SG+VDQS+GMLSDDVVE+GY+LLC A
Sbjct: 61  DPDETILSKALDSGLSVPHDCKLGVCMTCPAKLLSGSVDQSDGMLSDDVVERGYALLCAA 120

Query: 156 YPRSDCHIKTIPEEELLALQLATAND 180
           YP+SDC I+TIPE+ELL+LQLATAND
Sbjct: 121 YPQSDCEIRTIPEDELLSLQLATAND 143

[Close]
BLAST of MELO3C006533 vs. TrEMBL
Match: F6HDQ5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g03490 PE=4 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 4.3e-51
Identity = 106/147 (72.11%), Postives = 123/147 (83.67%), Query Frame = 1 

Query: 36  MATLHFVPS-AFSLPKQKQPIKLSS--VKPTTHISCSRRRLVVRSYKVVIEHEGQTTELE 95
           MATLHF  S +F+L KQ Q  KL +  ++P    +  +  L V++YKVVI+HEG+TTELE
Sbjct: 1   MATLHFTTSPSFTLTKQVQLTKLPTFQIRPRPRPNSRQLSLRVQAYKVVIDHEGKTTELE 60

Query: 96  VDPDESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVVEQGYSLLCV 155
           V+ DESIL  ALD GL +PHDCKLGVCMTCPARLVSGT+DQSEGMLSDDVVE+GY+LLCV
Sbjct: 61  VEEDESILGKALDTGLSVPHDCKLGVCMTCPARLVSGTIDQSEGMLSDDVVERGYALLCV 120

Query: 156 AYPRSDCHIKTIPEEELLALQLATAND 180
           AYPRSDCHIKTIPEEELL+LQLATAND
Sbjct: 121 AYPRSDCHIKTIPEEELLSLQLATAND 147

[Close]
BLAST of MELO3C006533 vs. TrEMBL
Match: B9RTR5_RICCO (Ferredoxin-1, putative OS=Ricinus communis GN=RCOM_0912010 PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 5.7e-51
Identity = 104/150 (69.33%), Postives = 125/150 (83.33%), Query Frame = 1 

Query: 36  MATLHFVPS---AFSLPKQKQPIKLSSVKPTTHISCSRRRL---VVRSYKVVIEHEGQTT 95
           MAT+HF PS   +F+L +Q  P K+ S K    ++C   R    +VRSYKVVIEHEGQ+T
Sbjct: 1   MATIHFTPSPSPSFTLTQQGLPTKIPSFK----LNCRNGRSLKSIVRSYKVVIEHEGQST 60

Query: 96  ELEVDPDESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVVEQGYSL 155
           ELEV+PDE+ILS ALD+GLE+PHDCKLGVCMTCPA+++SGTVDQSEGMLSDDVV+ GY+L
Sbjct: 61  ELEVEPDENILSKALDSGLEVPHDCKLGVCMTCPAKVISGTVDQSEGMLSDDVVDSGYAL 120

Query: 156 LCVAYPRSDCHIKTIPEEELLALQLATAND 180
           LC AYPRSDC I+TIPE+ELL+LQLATAND
Sbjct: 121 LCAAYPRSDCRIRTIPEDELLSLQLATAND 146

[Close]
BLAST of MELO3C006533 vs. TrEMBL
Match: A0A061ETU0_THECC (2Fe-2S ferredoxin-like superfamily protein (Fragment) OS=Theobroma cacao GN=TCM_020628 PE=4 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 1.6e-50
Identity = 103/151 (68.21%), Postives = 123/151 (81.46%), Query Frame = 1 

Query: 32  EKKTMATLHFVPSAFSLPKQKQPIKL--SSVKPTT-HISCSRRRLVVRSYKVVIEHEGQT 91
           +K TMATLHF PS   +  + +P  L  S + P   H S     ++ RSYKVVIEHEGQ+
Sbjct: 74  QKGTMATLHFTPSPSFILNKPRPTTLATSQLNPRARHGSLRFSTVIARSYKVVIEHEGQS 133

Query: 92  TELEVDPDESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVVEQGYS 151
           TELEV+PDE+ILS ALD+GL +PHDCKLGVCMTCPA+L+SG VDQS+GMLSDDV+E+G++
Sbjct: 134 TELEVEPDETILSKALDSGLSVPHDCKLGVCMTCPAKLLSGEVDQSDGMLSDDVMERGFA 193

Query: 152 LLCVAYPRSDCHIKTIPEEELLALQLATAND 180
           LLC AYPRSDCHIKTIPEEELL+LQLATAND
Sbjct: 194 LLCAAYPRSDCHIKTIPEEELLSLQLATAND 224

[Close]
BLAST of MELO3C006533 vs. TAIR10
Match: AT4G14890.1 (AT4G14890.1 2Fe-2S ferredoxin-like superfamily protein)

HSP 1 Score: 185.7 bits (470), Expect = 2.6e-47
Identity = 91/144 (63.19%), Postives = 114/144 (79.17%), Query Frame = 1 

Query: 44  SAFSLPKQ------KQPIKLSSVKPTTHIS--CSRRRLVVRSYKVVIEHEGQTTELEVDP 103
           S  SLPK         P++ +++  TT+     +  R++ R+YKVV+EH+G+TTELEV+P
Sbjct: 11  STISLPKPYLSNSFSFPLRNATLSTTTNRRNFLTTGRIIARAYKVVVEHDGKTTELEVEP 70

Query: 104 DESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVVEQGYSLLCVAYP 163
           DE+ILS ALD+GL++P+DC LGVCMTCPA+LV+GTVDQS GMLSDDVVE+GY+LLC +YP
Sbjct: 71  DETILSKALDSGLDVPYDCNLGVCMTCPAKLVTGTVDQSGGMLSDDVVERGYTLLCASYP 130

Query: 164 RSDCHIKTIPEEELLALQLATAND 180
            SDCHIK IPEEELL+LQLATAND
Sbjct: 131 TSDCHIKMIPEEELLSLQLATAND 154

[Close]
BLAST of MELO3C006533 vs. TAIR10
Match: AT2G27510.1 (AT2G27510.1 ferredoxin 3)

HSP 1 Score: 91.3 bits (225), Expect = 6.7e-19
Identity = 46/94 (48.94%), Postives = 61/94 (64.89%), Query Frame = 1 

Query: 78  YKV-VIEHEGQTTELEVDPDESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEG 137
           YKV ++  +GQ  E EV  D+ IL +A + G+++P+ C+ G C TC  ++VSG VDQS+G
Sbjct: 61  YKVKLLGPDGQEDEFEVQDDQYILDAAEEAGVDLPYSCRAGACSTCAGQIVSGNVDQSDG 120

Query: 138 -MLSDDVVEQGYSLLCVAYPRSDCHIKTIPEEEL 170
             L D  +E+GY L CVAYP+SDC I T  E EL
Sbjct: 121 SFLEDSHLEKGYVLTCVAYPQSDCVIHTHKETEL 154

[Close]
BLAST of MELO3C006533 vs. TAIR10
Match: AT1G10960.1 (AT1G10960.1 ferredoxin 1)

HSP 1 Score: 80.9 bits (198), Expect = 9.0e-16
Identity = 52/158 (32.91%), Postives = 88/158 (55.70%), Query Frame = 1 

Query: 15  MVTTSQITSFSNSSLSREKKTMATLHFVPSAFSLPKQKQPIKLSSVKPTTHISCSRRRLV 74
           M +T+  ++  ++S  R ++T  +L  +P A +         L  +K +T  +   R   
Sbjct: 1   MASTALSSAIVSTSFLRRQQTPISLRSLPFANTQ-------SLFGLKSST--ARGGRVTA 60

Query: 75  VRSYKV-VIEHEGQTTELEVDPDESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQ 134
           + +YKV  I  EG+  E+E + D  +L +A + GL++P+ C+ G C +C  ++VSG++DQ
Sbjct: 61  MATYKVKFITPEGEQ-EVECEEDVYVLDAAEEAGLDLPYSCRAGSCSSCAGKVVSGSIDQ 120

Query: 135 S-EGMLSDDVVEQGYSLLCVAYPRSDCHIKTIPEEELL 171
           S +  L D+ + +GY L CVAYP SD  I+T  EE ++
Sbjct: 121 SDQSFLDDEQMSEGYVLTCVAYPTSDVVIETHKEEAIM 148

[Close]
BLAST of MELO3C006533 vs. TAIR10
Match: AT5G10000.1 (AT5G10000.1 ferredoxin 4)

HSP 1 Score: 79.0 bits (193), Expect = 3.4e-15
Identity = 39/91 (42.86%), Postives = 56/91 (61.54%), Query Frame = 1 

Query: 81  VIEHEGQTTELEVDPDESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEG-MLS 140
           +I  EG+  E+E + D  IL SA + GLE+P+ C+ G C TC  +LVSG VDQS G  L 
Sbjct: 58  LISPEGEEQEIEGNEDCCILESAENAGLELPYSCRSGTCGTCCGKLVSGKVDQSLGSFLE 117

Query: 141 DDVVEQGYSLLCVAYPRSDCHIKTIPEEELL 171
           ++ +++GY L C+A P  DC + T  + +L+
Sbjct: 118 EEQIQKGYILTCIALPLEDCVVYTHKQSDLI 148

[Close]
BLAST of MELO3C006533 vs. TAIR10
Match: AT1G60950.1 (AT1G60950.1 2Fe-2S ferredoxin-like superfamily protein)

HSP 1 Score: 77.8 bits (190), Expect = 7.6e-15
Identity = 51/158 (32.28%), Postives = 84/158 (53.16%), Query Frame = 1 

Query: 15  MVTTSQITSFSNSSLSREKKTMATLHFVPSAFSLPKQKQPIKLSSVKPTTHISCSRRRLV 74
           M +T+  ++   +S  R      +L  +PSA +         L  +K  T  +   R   
Sbjct: 1   MASTALSSAIVGTSFIRRSPAPISLRSLPSANTQ-------SLFGLKSGT--ARGGRVTA 60

Query: 75  VRSYKV-VIEHEGQTTELEVDPDESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQ 134
           + +YKV  I  EG+  E+E D D  +L +A + G+++P+ C+ G C +C  ++VSG+VDQ
Sbjct: 61  MATYKVKFITPEGEL-EVECDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGSVDQ 120

Query: 135 S-EGMLSDDVVEQGYSLLCVAYPRSDCHIKTIPEEELL 171
           S +  L D+ + +G+ L C AYP SD  I+T  EE+++
Sbjct: 121 SDQSFLDDEQIGEGFVLTCAAYPTSDVTIETHKEEDIV 148

[Close]
BLAST of MELO3C006533 vs. NCBI nr
Match: gi|659076437|ref|XP_008438679.1| (PREDICTED: ferredoxin, root R-B2 [Cucumis melo])

HSP 1 Score: 355.1 bits (910), Expect = 7.0e-95
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 1 

Query: 1   MLELRTLSLHQRPRMVTTSQITSFSNSSLSREKKTMATLHFVPSAFSLPKQKQPIKLSSV 60
           MLELRTLSLHQRPRMVTTSQITSFSNSSLSREKKTMATLHFVPSAFSLPKQKQPIKLSSV
Sbjct: 1   MLELRTLSLHQRPRMVTTSQITSFSNSSLSREKKTMATLHFVPSAFSLPKQKQPIKLSSV 60

Query: 61  KPTTHISCSRRRLVVRSYKVVIEHEGQTTELEVDPDESILSSALDNGLEIPHDCKLGVCM 120
           KPTTHISCSRRRLVVRSYKVVIEHEGQTTELEVDPDESILSSALDNGLEIPHDCKLGVCM
Sbjct: 61  KPTTHISCSRRRLVVRSYKVVIEHEGQTTELEVDPDESILSSALDNGLEIPHDCKLGVCM 120

Query: 121 TCPARLVSGTVDQSEGMLSDDVVEQGYSLLCVAYPRSDCHIKTIPEEELLALQLATAND 180
           TCPARLVSGTVDQSEGMLSDDVVEQGYSLLCVAYPRSDCHIKTIPEEELLALQLATAND
Sbjct: 121 TCPARLVSGTVDQSEGMLSDDVVEQGYSLLCVAYPRSDCHIKTIPEEELLALQLATAND 179

[Close]
BLAST of MELO3C006533 vs. NCBI nr
Match: gi|449432700|ref|XP_004134137.1| (PREDICTED: ferredoxin-1 [Cucumis sativus])

HSP 1 Score: 283.9 bits (725), Expect = 2.0e-73
Identity = 141/144 (97.92%), Postives = 142/144 (98.61%), Query Frame = 1 

Query: 36  MATLHFVPSAFSLPKQKQPIKLSSVKPTTHISCSRRRLVVRSYKVVIEHEGQTTELEVDP 95
           MATLHFVPSAFSLPKQKQPIKLSSV+PTT ISCSRRRLVVRSYKVVIEHEGQTTELEVDP
Sbjct: 1   MATLHFVPSAFSLPKQKQPIKLSSVRPTTQISCSRRRLVVRSYKVVIEHEGQTTELEVDP 60

Query: 96  DESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVVEQGYSLLCVAYP 155
           DESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVV QGYSLLCVAYP
Sbjct: 61  DESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVVAQGYSLLCVAYP 120

Query: 156 RSDCHIKTIPEEELLALQLATAND 180
           RSDCHIKTIPEEELLALQLATAND
Sbjct: 121 RSDCHIKTIPEEELLALQLATAND 144

[Close]
BLAST of MELO3C006533 vs. NCBI nr
Match: gi|703078552|ref|XP_010090921.1| (Ferredoxin-3 [Morus notabilis])

HSP 1 Score: 213.8 bits (543), Expect = 2.5e-52
Identity = 107/146 (73.29%), Postives = 127/146 (86.99%), Query Frame = 1 

Query: 36  MATLHFVPS-AFSLPKQKQPIKLSSVKPTTHISCSRRR-LVVRSYKVVIEHEGQTTELEV 95
           MATLHF PS +FSL +Q+ P KL S    + ++  RRR L VRSYKVVIEHEGQ+TELEV
Sbjct: 1   MATLHFTPSPSFSLTRQRHPTKLFSA---SRLNLRRRRSLTVRSYKVVIEHEGQSTELEV 60

Query: 96  DPDESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVVEQGYSLLCVA 155
           DPDE+ILS ALD+GL +PHDCKLGVCMTCPA+L+SG+VDQS+GMLSDDVVE+GY+LLC A
Sbjct: 61  DPDETILSKALDSGLSVPHDCKLGVCMTCPAKLLSGSVDQSDGMLSDDVVERGYALLCAA 120

Query: 156 YPRSDCHIKTIPEEELLALQLATAND 180
           YP+SDC I+TIPE+ELL+LQLATAND
Sbjct: 121 YPQSDCEIRTIPEDELLSLQLATAND 143

[Close]
BLAST of MELO3C006533 vs. NCBI nr
Match: gi|802581282|ref|XP_012069630.1| (PREDICTED: ferredoxin-5, chloroplastic [Jatropha curcas])

HSP 1 Score: 212.6 bits (540), Expect = 5.6e-52
Identity = 108/179 (60.34%), Postives = 138/179 (77.09%), Query Frame = 1 

Query: 2   LELRTLSLHQRPRMVTTSQITSFSNSSLSREKKTMATLHFVPS-AFSLPKQKQPIKLSSV 61
           L L + + H +P+         F      ++KK+MATL+F PS +F++ K+  PIKL S+
Sbjct: 20  LILSSTTHHFKPK----KSFPHFKPPKSKKKKKSMATLNFTPSPSFTITKKALPIKLPSL 79

Query: 62  KPTTHISCSRRRLVVRSYKVVIEHEGQTTELEVDPDESILSSALDNGLEIPHDCKLGVCM 121
           K   + +    +  VRSYKVVIEHEGQ+TELEVDPDE+ILS ALD+GL +PHDCKLGVCM
Sbjct: 80  K-LNYRTARSLKTTVRSYKVVIEHEGQSTELEVDPDENILSKALDSGLSVPHDCKLGVCM 139

Query: 122 TCPARLVSGTVDQSEGMLSDDVVEQGYSLLCVAYPRSDCHIKTIPEEELLALQLATAND 180
           TCPA++VSG +DQSEGMLSDDVVE+GY+LLC +YPRSDC I+TIPE+ELL+LQLAT+ND
Sbjct: 140 TCPAKVVSGKIDQSEGMLSDDVVERGYALLCASYPRSDCRIRTIPEDELLSLQLATSND 193

[Close]
BLAST of MELO3C006533 vs. NCBI nr
Match: gi|297737056|emb|CBI26257.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 209.9 bits (533), Expect = 3.6e-51
Identity = 106/150 (70.67%), Postives = 125/150 (83.33%), Query Frame = 1 

Query: 33  KKTMATLHFVPS-AFSLPKQKQPIKLSS--VKPTTHISCSRRRLVVRSYKVVIEHEGQTT 92
           ++ MATLHF  S +F+L KQ Q  KL +  ++P    +  +  L V++YKVVI+HEG+TT
Sbjct: 46  QENMATLHFTTSPSFTLTKQVQLTKLPTFQIRPRPRPNSRQLSLRVQAYKVVIDHEGKTT 105

Query: 93  ELEVDPDESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVVEQGYSL 152
           ELEV+ DESIL  ALD GL +PHDCKLGVCMTCPARLVSGT+DQSEGMLSDDVVE+GY+L
Sbjct: 106 ELEVEEDESILGKALDTGLSVPHDCKLGVCMTCPARLVSGTIDQSEGMLSDDVVERGYAL 165

Query: 153 LCVAYPRSDCHIKTIPEEELLALQLATAND 180
           LCVAYPRSDCHIKTIPEEELL+LQLATAND
Sbjct: 166 LCVAYPRSDCHIKTIPEEELLSLQLATAND 195

The following BLAST results are available for this feature:
BLAST of MELO3C006533 vs. Swiss-Prot
Match NameE-valueIdentityDescription
FER1_DESMC2.2e-1951.06Ferredoxin-1 OS=Desmonostoc muscorum PE=1 SV=2[more]
FER2_SYNP62.8e-1947.96Ferredoxin-2 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) G... [more]
FER_MASLA3.7e-1950.00Ferredoxin OS=Mastigocladus laminosus GN=petF PE=1 SV=2[more]
FER_CHLFR8.2e-1950.00Ferredoxin OS=Chlorogloeopsis fritschii PE=1 SV=2[more]
FER1_LEPBY1.8e-1847.92Ferredoxin-1 OS=Leptolyngbya boryana GN=petF1 PE=1 SV=1[more]
BLAST of MELO3C006533 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L4U6_CUCSA1.4e-7397.92Ferredoxin-1 OS=Cucumis sativus GN=Csa_3G146700 PE=4 SV=1[more]
W9R8L4_9ROSA1.8e-5273.29Ferredoxin-3 OS=Morus notabilis GN=L484_004463 PE=4 SV=1[more]
F6HDQ5_VITVI4.3e-5172.11Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g03490 PE=4 SV=... [more]
B9RTR5_RICCO5.7e-5169.33Ferredoxin-1, putative OS=Ricinus communis GN=RCOM_0912010 PE=4 SV=1[more]
A0A061ETU0_THECC1.6e-5068.212Fe-2S ferredoxin-like superfamily protein (Fragment) OS=Theobroma cacao GN=TCM_... [more]
BLAST of MELO3C006533 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G14890.12.6e-4763.19 2Fe-2S ferredoxin-like superfamily protein[more]
AT2G27510.16.7e-1948.94 ferredoxin 3[more]
AT1G10960.19.0e-1632.91 ferredoxin 1[more]
AT5G10000.13.4e-1542.86 ferredoxin 4[more]
AT1G60950.17.6e-1532.28 2Fe-2S ferredoxin-like superfamily protein[more]
BLAST of MELO3C006533 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659076437|ref|XP_008438679.1|7.0e-95100.00PREDICTED: ferredoxin, root R-B2 [Cucumis melo][more]
gi|449432700|ref|XP_004134137.1|2.0e-7397.92PREDICTED: ferredoxin-1 [Cucumis sativus][more]
gi|703078552|ref|XP_010090921.1|2.5e-5273.29Ferredoxin-3 [Morus notabilis][more]
gi|802581282|ref|XP_012069630.1|5.6e-5260.34PREDICTED: ferredoxin-5, chloroplastic [Jatropha curcas][more]
gi|297737056|emb|CBI26257.3|3.6e-5170.67unnamed protein product [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR0010412Fe-2S_ferredoxin-type
IPR010241Fd_pln
IPR012675Beta-grasp_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0009055electron carrier activity
GO:0051536iron-sulfur cluster binding
GO:00515372 iron, 2 sulfur cluster binding
Vocabulary: Biological Process
TermDefinition
GO:0022900electron transport chain
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015995 chlorophyll biosynthetic process
biological_process GO:0022900 electron transport chain
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0006364 rRNA processing
biological_process GO:0009644 response to high light intensity
cellular_component GO:0009507 chloroplast
cellular_component GO:0005575 cellular_component
molecular_function GO:0051537 2 iron, 2 sulfur cluster binding
molecular_function GO:0009055 electron carrier activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0051536 iron-sulfur cluster binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU49396melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C006533T1MELO3C006533T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU49396MU49396transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainPFAMPF00111Fer2coord: 83..155
score: 3.9
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainPROFILEPS510852FE2S_FER_2coord: 78..167
score: 12
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainunknownSSF542922Fe-2S ferredoxin-likecoord: 76..173
score: 2.75
IPR010241Ferredoxin [2Fe-2S], plantTIGRFAMsTIGR02008TIGR02008coord: 77..169
score: 3.2
IPR012675Beta-grasp domainGENE3DG3DSA:3.10.20.30coord: 75..175
score: 4.4
NoneNo IPR availablePANTHERPTHR19370NADH-CYTOCHROME B5 REDUCTASEcoord: 77..174
score: 2.3
NoneNo IPR availablePANTHERPTHR19370:SF127SUBFAMILY NOT NAMEDcoord: 77..174
score: 2.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C006533Csa3G146700Cucumber (Chinese Long) v2cumeB236
MELO3C006533Cla021628Watermelon (97103) v1mewmB461
MELO3C006533Cla97C05G086380Watermelon (97103) v2mewmbB434
MELO3C006533Bhi01G000588Wax gourdmewgoB529
MELO3C006533CSPI03G13150Wild cucumber (PI 183967)cpimeB230
MELO3C006533Cucsa.254290Cucumber (Gy14) v1cgymeB439
MELO3C006533CmaCh14G017050Cucurbita maxima (Rimu)cmameB242
MELO3C006533CmoCh14G017480Cucurbita moschata (Rifu)cmomeB230
MELO3C006533Lsi05G016020Bottle gourd (USVL1VR-Ls)lsimeB378
MELO3C006533Cp4.1LG03g10600Cucurbita pepo (Zucchini)cpemeB585
MELO3C006533CsGy3G013290Cucumber (Gy14) v2cgybmeB200
MELO3C006533Carg23523Silver-seed gourdcarmeB0839
MELO3C006533CsaV3_3G013320Cucumber (Chinese Long) v3cucmeB236
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C006533Bottle gourd (USVL1VR-Ls)lsimeB029
MELO3C006533Bottle gourd (USVL1VR-Ls)lsimeB222
MELO3C006533Silver-seed gourdcarmeB0073
MELO3C006533Silver-seed gourdcarmeB0332
MELO3C006533Silver-seed gourdcarmeB0610
MELO3C006533Watermelon (97103) v2mewmbB448
MELO3C006533Watermelon (97103) v2mewmbB453
MELO3C006533Wax gourdmewgoB516
MELO3C006533Melon (DHL92) v3.5.1memeB091
MELO3C006533Cucurbita maxima (Rimu)cmameB342
MELO3C006533Cucurbita maxima (Rimu)cmameB763
MELO3C006533Cucurbita maxima (Rimu)cmameB850
MELO3C006533Cucurbita moschata (Rifu)cmomeB335
MELO3C006533Cucurbita moschata (Rifu)cmomeB832
MELO3C006533Cucurbita moschata (Rifu)cmomeB755
MELO3C006533Watermelon (Charleston Gray)mewcgB411
MELO3C006533Watermelon (Charleston Gray)mewcgB427
MELO3C006533Watermelon (97103) v1mewmB486
MELO3C006533Watermelon (97103) v1mewmB445
MELO3C006533Cucurbita pepo (Zucchini)cpemeB316
MELO3C006533Cucurbita pepo (Zucchini)cpemeB813