MELO3C006065 (gene) Melon (DHL92) v3.5.1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTCTGCACTCGTGATCACATCATTAGTGGATTGTGTGAAAAAGGATGTGTGGTTGAGGGGATGGAGTGGTTGATAACTATGTTAAAGAGCAATCTCAAGCCTCAAAAGAAAACCTTTTGTAAGTTGATTCAGAGTCTCATTCAAATTGGTAAATTAGATGATTCTTTATCAATCATAGGCTCAATGTTTAGAGTTGGTTATAAACTAGAAGAAGGCATTCTCAGTCATCTCTTGGATAAACTATGTGAAAACAAGTATCATTTTGTTGAATCAAAATTAGAGGAAATTATAAATTCCAATTAG ATGGTCTGCACTCGTGATCACATCATTAGTGGATTGTGTGAAAAAGGATGTGTGGTTGAGGGGATGGAGTGGTTGATAACTATGTTAAAGAGCAATCTCAAGCCTCAAAAGAAAACCTTTTGTAAGTTGATTCAGAGTCTCATTCAAATTGGTAAATTAGATGATTCTTTATCAATCATAGGCTCAATGTTTAGAGTTGGTTATAAACTAGAAGAAGGCATTCTCAGTCATCTCTTGGATAAACTATGTGAAAACAAGTATCATTTTGTTGAATCAAAATTAGAGGAAATTATAAATTCCAATTAG ATGGTCTGCACTCGTGATCACATCATTAGTGGATTGTGTGAAAAAGGATGTGTGGTTGAGGGGATGGAGTGGTTGATAACTATGTTAAAGAGCAATCTCAAGCCTCAAAAGAAAACCTTTTGTAAGTTGATTCAGAGTCTCATTCAAATTGGTAAATTAGATGATTCTTTATCAATCATAGGCTCAATGTTTAGAGTTGGTTATAAACTAGAAGAAGGCATTCTCAGTCATCTCTTGGATAAACTATGTGAAAACAAGTATCATTTTGTTGAATCAAAATTAGAGGAAATTATAAATTCCAATTAG MVCTRDHIISGLCEKGCVVEGMEWLITMLKSNLKPQKKTFCKLIQSLIQIGKLDDSLSIIGSMFRVGYKLEEGILSHLLDKLCENKYHFVESKLEEIINSN*
BLAST of MELO3C006065 vs. TrEMBL
Match: A0A061EPL5_THECC (Tetratricopeptide repeat-like superfamily protein, putative isoform 2 (Fragment) OS=Theobroma cacao GN=TCM_021066 PE=4 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 1.3e-23 Identity = 56/101 (55.45%), Postives = 72/101 (71.29%), Query Frame = 1
BLAST of MELO3C006065 vs. TrEMBL
Match: A0A061EN69_THECC (Tetratricopeptide repeat-like superfamily protein, putative isoform 1 OS=Theobroma cacao GN=TCM_021066 PE=4 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 1.3e-23 Identity = 56/101 (55.45%), Postives = 72/101 (71.29%), Query Frame = 1
BLAST of MELO3C006065 vs. TrEMBL
Match: F6HDK3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g02440 PE=4 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 2.2e-20 Identity = 50/100 (50.00%), Postives = 71/100 (71.00%), Query Frame = 1
BLAST of MELO3C006065 vs. TrEMBL
Match: A0A0D2STJ2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G074200 PE=4 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 2.5e-19 Identity = 50/99 (50.51%), Postives = 68/99 (68.69%), Query Frame = 1
BLAST of MELO3C006065 vs. TrEMBL
Match: V4RYR3_9ROSI (Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v10007051mg PE=4 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 7.2e-19 Identity = 51/100 (51.00%), Postives = 66/100 (66.00%), Query Frame = 1
BLAST of MELO3C006065 vs. TAIR10
Match: AT3G07290.1 (AT3G07290.1 Pentatricopeptide repeat (PPR) superfamily protein) HSP 1 Score: 48.9 bits (115), Expect = 2.1e-06 Identity = 26/72 (36.11%), Postives = 38/72 (52.78%), Query Frame = 1
HSP 2 Score: 45.1 bits (105), Expect = 3.1e-05 Identity = 29/98 (29.59%), Postives = 46/98 (46.94%), Query Frame = 1
HSP 3 Score: 42.4 bits (98), Expect = 2.0e-04 Identity = 23/77 (29.87%), Postives = 40/77 (51.95%), Query Frame = 1
HSP 4 Score: 33.1 bits (74), Expect = 1.2e-01 Identity = 20/74 (27.03%), Postives = 36/74 (48.65%), Query Frame = 1
BLAST of MELO3C006065 vs. NCBI nr
Match: gi|659075108|ref|XP_008437970.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g18950 [Cucumis melo]) HSP 1 Score: 206.8 bits (525), Expect = 1.7e-50 Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 1
BLAST of MELO3C006065 vs. NCBI nr
Match: gi|659075108|ref|XP_008437970.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g18950 [Cucumis melo]) HSP 1 Score: 35.0 bits (79), Expect = 9.1e+01 Identity = 16/62 (25.81%), Postives = 31/62 (50.00%), Query Frame = 1
HSP 2 Score: 193.4 bits (490), Expect = 2.0e-46 Identity = 96/101 (95.05%), Postives = 98/101 (97.03%), Query Frame = 1
BLAST of MELO3C006065 vs. NCBI nr
Match: gi|590660268|ref|XP_007035355.1| (Tetratricopeptide repeat-like superfamily protein, putative isoform 1 [Theobroma cacao]) HSP 1 Score: 117.1 bits (292), Expect = 1.8e-23 Identity = 56/101 (55.45%), Postives = 72/101 (71.29%), Query Frame = 1
BLAST of MELO3C006065 vs. NCBI nr
Match: gi|590660272|ref|XP_007035356.1| (Tetratricopeptide repeat-like superfamily protein, putative isoform 2, partial [Theobroma cacao]) HSP 1 Score: 117.1 bits (292), Expect = 1.8e-23 Identity = 56/101 (55.45%), Postives = 72/101 (71.29%), Query Frame = 1
BLAST of MELO3C006065 vs. NCBI nr
Match: gi|731389041|ref|XP_010649846.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g18950 [Vitis vinifera]) HSP 1 Score: 106.3 bits (264), Expect = 3.2e-20 Identity = 50/100 (50.00%), Postives = 71/100 (71.00%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |