Bhi01G000299 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi01G000299
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Pentatricopeptide repeat-containing protein
Location	chr1 : 7153582 .. 7155405 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTAATATTACATCTCTTATGATCTCCATTCGCCAAAACTCTCGATTTGCCAAGAACCTTAGGATCCACATTCGGAATCTCTCGGTAGAAACGAATGGAGGCAATAAAGGGTATGAAGAGATTGAACCGAGTGAGAAATTGTTGAACCCTACTCGCCGGCAAGACGTCAGTGAGATTGCGGAAGAGGTTTGTAAGGTCATTAGGAACAAACCCAGATGGGAGCAGACTCTGCTTTCTGATTACCCTTCTTTCAATTTCCATGACCCGTCTTTTTTTCGCGAGCTTTTGAAGCAGTTAAACAATGTTTTGCTTTCGTTGAGGTTTTTTCTCTGGTTGAGTTCGCAGCCTAACTTCTTGCCCCATCCAGTCAGTTGCAACACGCTTTTCGATGCTCTTTTGGAAGCCAAGGCTTGTGTTCCCGCTAAATCTTTTCTTCATTCTTTTGGTTTTAGTCCTGAGCCAGCTTCATTGGAGAATTACATTCGATGTGTTTGTGAGGGTGGTTTGGTTGAGGAAGCTGTTAATGTATTGGATGTGTTAAAAGGGACTGGATATCGTCCATCCATTGAGACTTGGAACTTTGCTTTACGGAGTTGTCTTCAGTTTGAGAGGACTGATCTTATTTGGAAACTGTATGAAGAGATGATGAAAGCTGGTGTGCAGAAGGATGTGGGTATTGAGACTGTGGGGTATCTTATCCAGGCATTTTGCAGCGATAACAAGGTTTCAAGAGCTTATGAGCTTCTAAGACAGGCTTTAGAAGATGGATTGGCCCCTTGTAATGATGCTTTCAACAAATTGATTTCTAGATTCTGTGAGGAGAAGAATTATGATAGAGTATCAGAACTTCTTCACACAATGATAGCTAAGAACCGTAATCCGGATATTTTTACCTACCAGGAAATCATCAACGGGCTTTGCAAGGAAAGGAAGCAGCTTCAGGCATTTGAGGTTTTCAATGCCCTCAAGGGTCGGGGATATGCTCCTGATATGGTCATGTATACAACAATGATTCATGGGCTTTGTAAGATGAGGTGGCTTGGAGATGCTAGAAAGCTGTGGTTTGAGATGATTGTTAAGGGATTTCTTCCAAATGAGTATACGTACAACACGTTGATTTATGGATATTGTAAGATTGGAAATTTGGATGAGGCCTTGAAGCTATATAAGGAAATGCATGATAGAGGTTCTAAAGAAACCACTCTGAGCTGCAACATACTGATTGCAGGGTTGTGTCTACACGGAAGGACAGATGAAGCATACAACTTCTTTCGAGAAATGCCTTGCAAGGATGTAGTTTGCGATATTGTAACATACAATACCCTGATTCAAGGATTTTGCAGAGAGGGGAAGATATTGCAGAGCACAGACCTATTTAAGGAGCTGCTAGAGCAGGGGTTGCAGCCTTCAACTTCCTCTTATACTCATCTAATTCAAAAGCTTTGTCAAGTAGGTAGTGTGCAAGAAGCAAAGAAAATGTGGAATGATTTGCATAATAGAGGTCTTCAGCCAATGGTCTGCACTCGTGATCACATAATTAATGGATTGTGTGAACAAGGATGTGTGGTAGAGGGGATGGAGTGGTTGATAACTATGTTGAAGAGCAATCTCAAGCCTCAAAAGCAAACTTTTGTTAAGTTGGTTCAGAGTCTCATTCAAATAGGTAAATTAGATGATTCTTTATCAGTCATAGGCTCAATGCTTAGAGTAGGATATGAACTAGAAGAAGACACTCTCAGTTATCTCTTGAATAAACTATGTGAAAACAAGTATCAGTTTGTTGAATCACAACTAGAGGAAATCATAAATTTCAATCAGTAG

mRNA sequence

ATGGCTAATATTACATCTCTTATGATCTCCATTCGCCAAAACTCTCGATTTGCCAAGAACCTTAGGATCCACATTCGGAATCTCTCGGTAGAAACGAATGGAGGCAATAAAGGGTATGAAGAGATTGAACCGAGTGAGAAATTGTTGAACCCTACTCGCCGGCAAGACGTCAGTGAGATTGCGGAAGAGGTTTGTAAGGTCATTAGGAACAAACCCAGATGGGAGCAGACTCTGCTTTCTGATTACCCTTCTTTCAATTTCCATGACCCGTCTTTTTTTCGCGAGCTTTTGAAGCAGTTAAACAATGTTTTGCTTTCGTTGAGGTTTTTTCTCTGGTTGAGTTCGCAGCCTAACTTCTTGCCCCATCCAGTCAGTTGCAACACGCTTTTCGATGCTCTTTTGGAAGCCAAGGCTTGTGTTCCCGCTAAATCTTTTCTTCATTCTTTTGGTTTTAGTCCTGAGCCAGCTTCATTGGAGAATTACATTCGATGTGTTTGTGAGGGTGGTTTGGTTGAGGAAGCTGTTAATGTATTGGATGTGTTAAAAGGGACTGGATATCGTCCATCCATTGAGACTTGGAACTTTGCTTTACGGAGTTGTCTTCAGTTTGAGAGGACTGATCTTATTTGGAAACTGTATGAAGAGATGATGAAAGCTGGTGTGCAGAAGGATGTGGGTATTGAGACTGTGGGGTATCTTATCCAGGCATTTTGCAGCGATAACAAGGTTTCAAGAGCTTATGAGCTTCTAAGACAGGCTTTAGAAGATGGATTGGCCCCTTGTAATGATGCTTTCAACAAATTGATTTCTAGATTCTGTGAGGAGAAGAATTATGATAGAGTATCAGAACTTCTTCACACAATGATAGCTAAGAACCGTAATCCGGATATTTTTACCTACCAGGAAATCATCAACGGGCTTTGCAAGGAAAGGAAGCAGCTTCAGGCATTTGAGGTTTTCAATGCCCTCAAGGGTCGGGGATATGCTCCTGATATGGTCATGTATACAACAATGATTCATGGGCTTTGTAAGATGAGGTGGCTTGGAGATGCTAGAAAGCTGTGGTTTGAGATGATTGTTAAGGGATTTCTTCCAAATGAGTATACGTACAACACGTTGATTTATGGATATTGTAAGATTGGAAATTTGGATGAGGCCTTGAAGCTATATAAGGAAATGCATGATAGAGGTTCTAAAGAAACCACTCTGAGCTGCAACATACTGATTGCAGGGTTGTGTCTACACGGAAGGACAGATGAAGCATACAACTTCTTTCGAGAAATGCCTTGCAAGGATGTAGTTTGCGATATTGTAACATACAATACCCTGATTCAAGGATTTTGCAGAGAGGGGAAGATATTGCAGAGCACAGACCTATTTAAGGAGCTGCTAGAGCAGGGGTTGCAGCCTTCAACTTCCTCTTATACTCATCTAATTCAAAAGCTTTGTCAAGTAGGTAGTGTGCAAGAAGCAAAGAAAATGTGGAATGATTTGCATAATAGAGGTCTTCAGCCAATGGTCTGCACTCGTGATCACATAATTAATGGATTGTGTGAACAAGGATGTGTGGTAGAGGGGATGGAGTGGTTGATAACTATGTTGAAGAGCAATCTCAAGCCTCAAAAGCAAACTTTTGTTAAGTTGGTTCAGAGTCTCATTCAAATAGGTAAATTAGATGATTCTTTATCAGTCATAGGCTCAATGCTTAGAGTAGGATATGAACTAGAAGAAGACACTCTCAGTTATCTCTTGAATAAACTATGTGAAAACAAGTATCAGTTTGTTGAATCACAACTAGAGGAAATCATAAATTTCAATCAGTAG

Coding sequence (CDS)

ATGGCTAATATTACATCTCTTATGATCTCCATTCGCCAAAACTCTCGATTTGCCAAGAACCTTAGGATCCACATTCGGAATCTCTCGGTAGAAACGAATGGAGGCAATAAAGGGTATGAAGAGATTGAACCGAGTGAGAAATTGTTGAACCCTACTCGCCGGCAAGACGTCAGTGAGATTGCGGAAGAGGTTTGTAAGGTCATTAGGAACAAACCCAGATGGGAGCAGACTCTGCTTTCTGATTACCCTTCTTTCAATTTCCATGACCCGTCTTTTTTTCGCGAGCTTTTGAAGCAGTTAAACAATGTTTTGCTTTCGTTGAGGTTTTTTCTCTGGTTGAGTTCGCAGCCTAACTTCTTGCCCCATCCAGTCAGTTGCAACACGCTTTTCGATGCTCTTTTGGAAGCCAAGGCTTGTGTTCCCGCTAAATCTTTTCTTCATTCTTTTGGTTTTAGTCCTGAGCCAGCTTCATTGGAGAATTACATTCGATGTGTTTGTGAGGGTGGTTTGGTTGAGGAAGCTGTTAATGTATTGGATGTGTTAAAAGGGACTGGATATCGTCCATCCATTGAGACTTGGAACTTTGCTTTACGGAGTTGTCTTCAGTTTGAGAGGACTGATCTTATTTGGAAACTGTATGAAGAGATGATGAAAGCTGGTGTGCAGAAGGATGTGGGTATTGAGACTGTGGGGTATCTTATCCAGGCATTTTGCAGCGATAACAAGGTTTCAAGAGCTTATGAGCTTCTAAGACAGGCTTTAGAAGATGGATTGGCCCCTTGTAATGATGCTTTCAACAAATTGATTTCTAGATTCTGTGAGGAGAAGAATTATGATAGAGTATCAGAACTTCTTCACACAATGATAGCTAAGAACCGTAATCCGGATATTTTTACCTACCAGGAAATCATCAACGGGCTTTGCAAGGAAAGGAAGCAGCTTCAGGCATTTGAGGTTTTCAATGCCCTCAAGGGTCGGGGATATGCTCCTGATATGGTCATGTATACAACAATGATTCATGGGCTTTGTAAGATGAGGTGGCTTGGAGATGCTAGAAAGCTGTGGTTTGAGATGATTGTTAAGGGATTTCTTCCAAATGAGTATACGTACAACACGTTGATTTATGGATATTGTAAGATTGGAAATTTGGATGAGGCCTTGAAGCTATATAAGGAAATGCATGATAGAGGTTCTAAAGAAACCACTCTGAGCTGCAACATACTGATTGCAGGGTTGTGTCTACACGGAAGGACAGATGAAGCATACAACTTCTTTCGAGAAATGCCTTGCAAGGATGTAGTTTGCGATATTGTAACATACAATACCCTGATTCAAGGATTTTGCAGAGAGGGGAAGATATTGCAGAGCACAGACCTATTTAAGGAGCTGCTAGAGCAGGGGTTGCAGCCTTCAACTTCCTCTTATACTCATCTAATTCAAAAGCTTTGTCAAGTAGGTAGTGTGCAAGAAGCAAAGAAAATGTGGAATGATTTGCATAATAGAGGTCTTCAGCCAATGGTCTGCACTCGTGATCACATAATTAATGGATTGTGTGAACAAGGATGTGTGGTAGAGGGGATGGAGTGGTTGATAACTATGTTGAAGAGCAATCTCAAGCCTCAAAAGCAAACTTTTGTTAAGTTGGTTCAGAGTCTCATTCAAATAGGTAAATTAGATGATTCTTTATCAGTCATAGGCTCAATGCTTAGAGTAGGATATGAACTAGAAGAAGACACTCTCAGTTATCTCTTGAATAAACTATGTGAAAACAAGTATCAGTTTGTTGAATCACAACTAGAGGAAATCATAAATTTCAATCAGTAG

Protein sequence

MANITSLMISIRQNSRFAKNLRIHIRNLSVETNGGNKGYEEIEPSEKLLNPTRRQDVSEIAEEVCKVIRNKPRWEQTLLSDYPSFNFHDPSFFRELLKQLNNVLLSLRFFLWLSSQPNFLPHPVSCNTLFDALLEAKACVPAKSFLHSFGFSPEPASLENYIRCVCEGGLVEEAVNVLDVLKGTGYRPSIETWNFALRSCLQFERTDLIWKLYEEMMKAGVQKDVGIETVGYLIQAFCSDNKVSRAYELLRQALEDGLAPCNDAFNKLISRFCEEKNYDRVSELLHTMIAKNRNPDIFTYQEIINGLCKERKQLQAFEVFNALKGRGYAPDMVMYTTMIHGLCKMRWLGDARKLWFEMIVKGFLPNEYTYNTLIYGYCKIGNLDEALKLYKEMHDRGSKETTLSCNILIAGLCLHGRTDEAYNFFREMPCKDVVCDIVTYNTLIQGFCREGKILQSTDLFKELLEQGLQPSTSSYTHLIQKLCQVGSVQEAKKMWNDLHNRGLQPMVCTRDHIINGLCEQGCVVEGMEWLITMLKSNLKPQKQTFVKLVQSLIQIGKLDDSLSVIGSMLRVGYELEEDTLSYLLNKLCENKYQFVESQLEEIINFNQ

Homology

[Close]

BLAST of Bhi01G000299 vs. TAIR10
Match: AT5G18950.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 201.1 bits (510), Expect = 2.0e-51
Identity = 116/260 (44.62%), Postives = 155/260 (59.62%), Query Frame = 0


Query: 1   MANITSLMISIRQNSRFAKNLRIHIRNLSVETNGGNKGYEEIEPSEKLLNPTRRQDVSEI 60
           M+   S +IS  +N R  KN    IR+L+VE+        E +P E+          +E+
Sbjct: 1   MSRGQSYLISFFRN-RTRKNPNTQIRSLTVESRDC-----ESKPDEQ----KSAVSYTEM 60

Query: 61  AEEVCKVIRNKPRWEQTLLSDYPSFNFHDPSFFRELLKQLNNVLLSLRFFLWLSSQPNFL 120
           A+ V  ++R + RW+QTL+SD+PSF+F DP FF ELLK  NNVL SL FF WL S  ++ 
Sbjct: 61  AKTVSTIMRERQRWQQTLVSDFPSFDFADPLFFGELLKSQNNVLFSLWFFRWLCSNYDYT 120

Query: 121 PHPVSCNTLFDALLEAKACVPAKSFLHSFGFSPEPASLENYIRCVCEGGLVEEAVNVLDV 180
           P PVS N LF ALL+ KA   AKSFL + GF PEP  LE Y++C+ E GLVEEA+ V +V
Sbjct: 121 PGPVSLNILFGALLDGKAVKAAKSFLDTTGFKPEPTLLEQYVKCLSEEGLVEEAIEVYNV 180

Query: 181 LKGTGYRPSIETWNFALRSCLQFERTDLIWKLYEEMMKAGVQKDVGIETVGYLIQAFCSD 240
           LK  G   S+ T N  L  CL+  + D  W+L++EM    V+ +   E +  LI+A C  
Sbjct: 181 LKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEM----VESEFDSERIRCLIRALCDG 240

Query: 241 NKVSRAYELLRQALEDGLAP 261
             VS  YELL+Q L+ GL P
Sbjct: 241 GDVSEGYELLKQGLKQGLDP 246

[Close]

BLAST of Bhi01G000299 vs. TAIR10
Match: AT5G25630.2 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 51.6 bits (122), Expect = 2.0e-06
Identity = 32/107 (29.91%), Postives = 54/107 (50.47%), Query Frame = 0


Query: 162 IRCVCEGGLVEEAVNVLDVLKGTGYRPSIETWNFALRSCLQFERTDLIWKLYEEMMKAGV 221
           I    E G +E+AV  L  +K  G  P+  T+N  ++      + +   +L + M++ G 
Sbjct: 122 INAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEG- 181

Query: 222 QKDVG--IETVGYLIQAFCSDNKVSRAYELLRQALEDGLAPCNDAFN 267
             DVG  I T   L+QA+C   KV  A+E++++  E G+ P    +N
Sbjct: 182 NVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYN 227

[Close]

BLAST of Bhi01G000299 vs. TAIR10
Match: AT2G15630.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 45.4 bits (106), Expect = 1.4e-04
Identity = 26/101 (25.74%), Postives = 45/101 (44.55%), Query Frame = 0


Query: 125 SCNTLFDALLEAKACVPAKSFLHSFGFSPEPASLENYIRCVCEGGLVEEAVNVLDVLKGT 184
           S   LFD L+ A   +  KS +            +  +RC C+  +V+EA+    ++K  
Sbjct: 135 SIRNLFDELVLAHDRLETKSTI----------LFDLLVRCCCQLRMVDEAIECFYLMKEK 194

Query: 185 GYRPSIETWNFALRSCLQFERTDLIWKLYEEMMKAGVQKDV 226
           G+ P  ET N  L    +  R +  W  Y +M +  ++ +V
Sbjct: 195 GFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNV 225

[Close]

BLAST of Bhi01G000299 vs. TAIR10
Match: AT2G17670.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 44.7 bits (104), Expect = 2.4e-04
Identity = 37/148 (25.00%), Postives = 64/148 (43.24%), Query Frame = 0


Query: 113 LSSQPNFLPHPVSCNTLFDALLEAKACVPAKS---------FLHSFGFSPEPASLENYIR 172
           L SQPNF P      + F  LL      P  S          + + G  P+  + +  +R
Sbjct: 112 LKSQPNFRPG----RSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVR 171

Query: 173 CVCEGGLVEEAVNVLDVLKGTGYRPSIETWNFALRSCLQFERTDLIWKLYEEMM-KAGVQ 232
            +CE G V+EA +++  L      P   T+NF L+   + +   ++++  +EM     V+
Sbjct: 172 SLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVK 231

Query: 233 KDVGIETVGYLIQAFCSDNKVSRAYELL 251
            D+   T+  LI   C+   +  A  L+
Sbjct: 232 PDLVSFTI--LIDNVCNSKNLREAMYLV 253

[Close]

BLAST of Bhi01G000299 vs. Swiss-Prot
Match: sp|Q8GYM2|PP393_ARATH (Pentatricopeptide repeat-containing protein At5g18950 OS=Arabidopsis thaliana OX=3702 GN=At5g18950 PE=2 SV=2)

HSP 1 Score: 201.1 bits (510), Expect = 3.6e-50
Identity = 116/260 (44.62%), Postives = 155/260 (59.62%), Query Frame = 0


Query: 1   MANITSLMISIRQNSRFAKNLRIHIRNLSVETNGGNKGYEEIEPSEKLLNPTRRQDVSEI 60
           M+   S +IS  +N R  KN    IR+L+VE+        E +P E+          +E+
Sbjct: 1   MSRGQSYLISFFRN-RTRKNPNTQIRSLTVESRDC-----ESKPDEQ----KSAVSYTEM 60

Query: 61  AEEVCKVIRNKPRWEQTLLSDYPSFNFHDPSFFRELLKQLNNVLLSLRFFLWLSSQPNFL 120
           A+ V  ++R + RW+QTL+SD+PSF+F DP FF ELLK  NNVL SL FF WL S  ++ 
Sbjct: 61  AKTVSTIMRERQRWQQTLVSDFPSFDFADPLFFGELLKSQNNVLFSLWFFRWLCSNYDYT 120

Query: 121 PHPVSCNTLFDALLEAKACVPAKSFLHSFGFSPEPASLENYIRCVCEGGLVEEAVNVLDV 180
           P PVS N LF ALL+ KA   AKSFL + GF PEP  LE Y++C+ E GLVEEA+ V +V
Sbjct: 121 PGPVSLNILFGALLDGKAVKAAKSFLDTTGFKPEPTLLEQYVKCLSEEGLVEEAIEVYNV 180

Query: 181 LKGTGYRPSIETWNFALRSCLQFERTDLIWKLYEEMMKAGVQKDVGIETVGYLIQAFCSD 240
           LK  G   S+ T N  L  CL+  + D  W+L++EM    V+ +   E +  LI+A C  
Sbjct: 181 LKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEM----VESEFDSERIRCLIRALCDG 240

Query: 241 NKVSRAYELLRQALEDGLAP 261
             VS  YELL+Q L+ GL P
Sbjct: 241 GDVSEGYELLKQGLKQGLDP 246

[Close]

BLAST of Bhi01G000299 vs. Swiss-Prot
Match: sp|Q8GZ63|PP397_ARATH (Pentatricopeptide repeat-containing protein At5g25630 OS=Arabidopsis thaliana OX=3702 GN=At5g25630 PE=2 SV=2)

HSP 1 Score: 51.6 bits (122), Expect = 3.6e-05
Identity = 32/107 (29.91%), Postives = 54/107 (50.47%), Query Frame = 0


Query: 162 IRCVCEGGLVEEAVNVLDVLKGTGYRPSIETWNFALRSCLQFERTDLIWKLYEEMMKAGV 221
           I    E G +E+AV  L  +K  G  P+  T+N  ++      + +   +L + M++ G 
Sbjct: 122 INAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEG- 181

Query: 222 QKDVG--IETVGYLIQAFCSDNKVSRAYELLRQALEDGLAPCNDAFN 267
             DVG  I T   L+QA+C   KV  A+E++++  E G+ P    +N
Sbjct: 182 NVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYN 227

[Close]

BLAST of Bhi01G000299 vs. TrEMBL
Match: tr|A0A1S3AVU1|A0A1S3AVU1_CUCME (pentatricopeptide repeat-containing protein At5g18950 OS=Cucumis melo OX=3656 GN=LOC103483227 PE=4 SV=1)

HSP 1 Score: 468.8 bits (1205), Expect = 1.9e-128
Identity = 228/265 (86.04%), Postives = 241/265 (90.94%), Query Frame = 0


Query: 1   MANITSLMISIRQNSRFAKNLRIHIRNLSVETNGGNKGYEEIEPSEKLLNPTRRQDVSEI 60
           M N+TSLMISIRQNSRF K+LRIHIRNLSVETNGGN G EEIE SEKLLN T R+DVSEI
Sbjct: 1   MVNLTSLMISIRQNSRFVKSLRIHIRNLSVETNGGNNGREEIESSEKLLNLTHRKDVSEI 60

Query: 61  AEEVCKVIRNKPRWEQTLLSDYPSFNFHDPSFFRELLKQLNNVLLSLRFFLWLSSQPNFL 120
           A EV KVIR+KPRWEQ+LLSDYPSFNFHDPSFF ELLKQLNNV LSLRFFLWLSSQP FL
Sbjct: 61  AAEVGKVIRSKPRWEQSLLSDYPSFNFHDPSFFSELLKQLNNVFLSLRFFLWLSSQPEFL 120

Query: 121 PHPVSCNTLFDALLEAKACVPAKSFLHSFGFSPEPASLENYIRCVCEGGLVEEAVNVLDV 180
           PHPVSCN LFDALLEAKAC PAKSFLHSF FSPEPASLENYIRCVCEGG+VEEAV + DV
Sbjct: 121 PHPVSCNKLFDALLEAKACAPAKSFLHSFDFSPEPASLENYIRCVCEGGIVEEAVKIFDV 180

Query: 181 LKGTGYRPSIETWNFALRSCLQFERTDLIWKLYEEMMKAGVQKDVGIETVGYLIQAFCSD 240
           LK  GY PS+ETWNFA +SCL+F RTDLIWKLYEEMM+AGVQKDV IETVGYLIQAFC+D
Sbjct: 181 LKEAGYHPSVETWNFAFQSCLKFGRTDLIWKLYEEMMEAGVQKDVDIETVGYLIQAFCND 240

Query: 241 NKVSRAYELLRQALEDGLAPCNDAF 266
           NKVSRAYE+LRQ LEDGLAPCNDAF
Sbjct: 241 NKVSRAYEILRQVLEDGLAPCNDAF 265

[Close]

BLAST of Bhi01G000299 vs. TrEMBL
Match: tr|A0A0A0L3A3|A0A0A0L3A3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G120440 PE=4 SV=1)

HSP 1 Score: 461.8 bits (1187), Expect = 2.3e-126
Identity = 226/265 (85.28%), Postives = 240/265 (90.57%), Query Frame = 0


Query: 1   MANITSLMISIRQNSRFAKNLRIHIRNLSVETNGGNKGYEEIEPSEKLLNPTRRQDVSEI 60
           M N+TSLMISIRQNSRF KNLRIHIRNLSVETNGGN G EEIE SEKLLN T+R+DVSEI
Sbjct: 1   MVNLTSLMISIRQNSRFVKNLRIHIRNLSVETNGGNNGREEIESSEKLLNLTQRKDVSEI 60

Query: 61  AEEVCKVIRNKPRWEQTLLSDYPSFNFHDPSFFRELLKQLNNVLLSLRFFLWLSSQPNFL 120
           A EV KVIR+KPRWEQ+LLSDYPSFNFHDPSFF ELLKQLNNV LSLRFFLWLSSQP FL
Sbjct: 61  AAEVGKVIRSKPRWEQSLLSDYPSFNFHDPSFFSELLKQLNNVFLSLRFFLWLSSQPEFL 120

Query: 121 PHPVSCNTLFDALLEAKACVPAKSFLHSFGFSPEPASLENYIRCVCEGGLVEEAVNVLDV 180
           PHPVSCN LFDALLEAKACVPAKSFL+SF FSPEPASLENYIRCVCEGGLVEEAV   D+
Sbjct: 121 PHPVSCNKLFDALLEAKACVPAKSFLYSFEFSPEPASLENYIRCVCEGGLVEEAVYTFDM 180

Query: 181 LKGTGYRPSIETWNFALRSCLQFERTDLIWKLYEEMMKAGVQKDVGIETVGYLIQAFCSD 240
           LK  GYRP +ETWNFA +SCL+F RTDLIWKLYE MM+ GVQKDV IETVGYLIQAFC+D
Sbjct: 181 LKEAGYRPYVETWNFAFQSCLKFGRTDLIWKLYEGMMETGVQKDVDIETVGYLIQAFCND 240

Query: 241 NKVSRAYELLRQALEDGLAPCNDAF 266
           NKVSRAYE+LRQ+LEDGL PCNDAF
Sbjct: 241 NKVSRAYEILRQSLEDGLTPCNDAF 265

[Close]

BLAST of Bhi01G000299 vs. TrEMBL
Match: tr|A0A2N9IWQ4|A0A2N9IWQ4_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS56890 PE=4 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 2.9e-76
Identity = 152/263 (57.79%), Postives = 187/263 (71.10%), Query Frame = 0


Query: 5   TSLMISIRQNSRFAKNLRIHIRNLSVETNGGN-KGYEEIEPSEKLLNPTRRQDVSEIAEE 64
           +S+++ IRQN R  +N    IRNL++ET  G+ K     E S+   N     D  EI +E
Sbjct: 6   SSILVFIRQNPRTRQNPNTQIRNLALETKDGDFKPNPNHESSQNAQN-----DFLEIVKE 65

Query: 65  VCKVIRNKPRWEQTLLSDYPSFNFHDPSFFRELLKQLNNVLLSLRFFLWLSSQPNFLPHP 124
           V ++ R KPRWEQ+LLSD+PSFNF DP FF EL++  NNVLLSLRFF WL S   F P P
Sbjct: 66  VSRITRTKPRWEQSLLSDFPSFNFTDPQFFYELIRNQNNVLLSLRFFHWLCSFNGFEPDP 125

Query: 125 VSCNTLFDALLEAKACVPAKSFLHSFGFSPEPASLENYIRCVCEGGLVEEAVNVLDVLKG 184
           +S N +FDAL+EAKAC  AKSFL S GF PEPASLE+YIRC+CEGGLVEEA++V D LKG
Sbjct: 126 LSLNAIFDALVEAKACNAAKSFLDSTGFKPEPASLEHYIRCLCEGGLVEEALDVFDRLKG 185

Query: 185 TGYRPSIETWNFALRSCLQFERTDLIWKLYEEMMKAGVQKDVGIETVGYLIQAFCSDNKV 244
               P+IETWN AL  CL+  RT+L+WKLY+EMM++ V + V +ETV YLI+AFC D  V
Sbjct: 186 IEVCPAIETWNSALSGCLKVGRTELVWKLYKEMMESSVVEKVDVETVEYLIRAFCEDKDV 245

Query: 245 SRAYELLRQALEDGLAPCNDAFN 267
           S+ YELL+Q L DG  P N AFN
Sbjct: 246 SKGYELLQQVLGDGSVPGNAAFN 263

[Close]

BLAST of Bhi01G000299 vs. TrEMBL
Match: tr|A0A2I4F2U4|A0A2I4F2U4_9ROSI (pentatricopeptide repeat-containing protein At5g18950 OS=Juglans regia OX=51240 GN=LOC108994972 PE=4 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 2.3e-73
Identity = 151/264 (57.20%), Postives = 180/264 (68.18%), Query Frame = 0


Query: 1   MANITSLMISIRQNSRFAKNLRIHIRNLSVETNGGNKGYEEIEPSEKLLNPTR--RQDVS 60
           MA   S +  IRQN R + N    IRNL++E    +    EI+P+     P+R    + +
Sbjct: 1   MARAPSPIFFIRQNPRTSPNPNTQIRNLALEIGEADCRGGEIKPNPD-HEPSRNAHNEFT 60

Query: 61  EIAEEVCKVIRNKPRWEQTLLSDYPSFNFHDPSFFRELLKQLNNVLLSLRFFLWLSSQPN 120
           EIA+EVCK+ R +PRWEQTL+SD+PSFNF DP FF EL+K  NNVLLSLRFF WL S   
Sbjct: 61  EIAKEVCKITRTRPRWEQTLVSDFPSFNFSDPRFFNELIKHQNNVLLSLRFFHWLCSCDG 120

Query: 121 FLPHPVSCNTLFDALLEAKACVPAKSFLHSFGFSPEPASLENYIRCVCEGGLVEEAVNVL 180
           F P P+S NTLF+AL+EAKAC  AK FL   GF PE ASLE Y RC+CE GLVEEA++V 
Sbjct: 121 FSPDPLSLNTLFNALVEAKACSVAKDFLDYTGFKPERASLECYARCLCEVGLVEEALDVF 180

Query: 181 DVLKGTGYRPSIETWNFALRSCLQFERTDLIWKLYEEMMKAGVQKDVGIETVGYLIQAFC 240
           D L+G G  PSI TWN AL   L+  RTDL+WKLY EMM++ V   V +ETVGYLIQAFC
Sbjct: 181 DRLRGDGINPSIATWNSALSGFLKVRRTDLVWKLYREMMESNVAAKVDVETVGYLIQAFC 240

Query: 241 SDNKVSRAYELLRQALEDGLAPCN 263
            D KV +  ELLRQ LEDG  P N
Sbjct: 241 EDGKVPKGNELLRQVLEDGFDPGN 263

[Close]

BLAST of Bhi01G000299 vs. TrEMBL
Match: tr|A0A2P4MFI7|A0A2P4MFI7_QUESU (Pentatricopeptide repeat-containing protein OS=Quercus suber OX=58331 GN=CFP56_47836 PE=4 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 3.3e-72
Identity = 150/263 (57.03%), Postives = 179/263 (68.06%), Query Frame = 0


Query: 5   TSLMISIRQNSRFAKNLRIHIRNLSVETNGGNKGYEEI-EPSEKLLNPTRRQDVSEIAEE 64
           +S++I IRQN R  +N    IRNL+ ET  G+     I EPS+K  N     D  EIA+E
Sbjct: 7   SSILIFIRQNPRTCQNPNTQIRNLTFETKDGDFKPNPIQEPSQKAQN-----DFIEIAKE 66

Query: 65  VCKVIRNKPRWEQTLLSDYPSFNFHDPSFFRELLKQLNNVLLSLRFFLWLSSQPNFLPHP 124
           V ++ R KPRWEQTLLSD+PSFNF DP FF EL++  NNVLLSLRFF WL S   F P P
Sbjct: 67  VSRITRTKPRWEQTLLSDFPSFNFTDPQFFNELIRNQNNVLLSLRFFHWLCSLNGFSPDP 126

Query: 125 VSCNTLFDALLEAKACVPAKSFLHSFGFSPEPASLENYIRCVCEGGLVEEAVNVLDVLKG 184
           +S N LFDAL+EAKAC  AKSF+              YI+C+ EGGLVEEA +V D L+G
Sbjct: 127 LSLNALFDALVEAKACNAAKSFIDYTXXXXXXXXXXLYIQCLFEGGLVEEAFDVFDRLRG 186

Query: 185 TGYRPSIETWNFALRSCLQFERTDLIWKLYEEMMKAGVQKDVGIETVGYLIQAFCSDNKV 244
            G  PSI TWN AL  CL+  RTDL+WKLY+EM+++ V   V +ETV YLI+AFC DNKV
Sbjct: 187 VGVCPSIATWNSALLGCLKVGRTDLVWKLYKEMVESSVVAKVDVETVEYLIRAFCEDNKV 246

Query: 245 SRAYELLRQALEDGLAPCNDAFN 267
           S+ YELLRQ LEDGL P N AFN
Sbjct: 247 SKGYELLRQVLEDGLDPGNAAFN 264

[Close]

BLAST of Bhi01G000299 vs. NCBI nr
Match: XP_022979328.1 (pentatricopeptide repeat-containing protein At5g18950-like [Cucurbita maxima])

HSP 1 Score: 473.0 bits (1216), Expect = 1.5e-129
Identity = 232/265 (87.55%), Postives = 242/265 (91.32%), Query Frame = 0


Query: 1   MANITSLMISIRQNSRFAKNLRIHIRNLSVETNGGNKGYEEIEPSEKLLNPTRRQDVSEI 60
           MANITSLMISIRQNSR  KNLRIHIRNLSVE NGG  G EEI  SEKLLNPT  QDV+EI
Sbjct: 1   MANITSLMISIRQNSRLVKNLRIHIRNLSVEMNGGKDGCEEINLSEKLLNPTHSQDVTEI 60

Query: 61  AEEVCKVIRNKPRWEQTLLSDYPSFNFHDPSFFRELLKQLNNVLLSLRFFLWLSSQPNFL 120
           ++EVCKVIR+KP+WEQTLLSDYPSFNFHDPSFFRELLKQLNNVLLSLRFFLWLSSQP FL
Sbjct: 61  SKEVCKVIRSKPKWEQTLLSDYPSFNFHDPSFFRELLKQLNNVLLSLRFFLWLSSQPEFL 120

Query: 121 PHPVSCNTLFDALLEAKACVPAKSFLHSFGFSPEPASLENYIRCVCEGGLVEEAVNVLDV 180
           PHPVSCNTLFDALLEAKACVPAKSFLHSFGFSPEPASLENYIRCVCEGGLVEEAVNV DV
Sbjct: 121 PHPVSCNTLFDALLEAKACVPAKSFLHSFGFSPEPASLENYIRCVCEGGLVEEAVNVFDV 180

Query: 181 LKGTGYRPSIETWNFALRSCLQFERTDLIWKLYEEMMKAGVQKDVGIETVGYLIQAFCSD 240
           LK  GYRPSIETWNFA +SCL+F R DLIWKLY EMM+ GVQ DVGIETVGYLIQA CSD
Sbjct: 181 LKEAGYRPSIETWNFAFQSCLKFGRIDLIWKLYAEMMETGVQADVGIETVGYLIQALCSD 240

Query: 241 NKVSRAYELLRQALEDGLAPCNDAF 266
           N V++AYELLRQALEDGLAP NDAF
Sbjct: 241 NNVTKAYELLRQALEDGLAPSNDAF 265

[Close]

BLAST of Bhi01G000299 vs. NCBI nr
Match: XP_023527514.1 (pentatricopeptide repeat-containing protein At5g18950-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 472.2 bits (1214), Expect = 2.6e-129
Identity = 232/265 (87.55%), Postives = 241/265 (90.94%), Query Frame = 0


Query: 1   MANITSLMISIRQNSRFAKNLRIHIRNLSVETNGGNKGYEEIEPSEKLLNPTRRQDVSEI 60
           MANITSLMISIRQNSR  KNL IHIRNLSVE NGG  G EEI  SEKLLNPT  QDV+EI
Sbjct: 1   MANITSLMISIRQNSRLVKNLGIHIRNLSVEMNGGKDGCEEINLSEKLLNPTHSQDVTEI 60

Query: 61  AEEVCKVIRNKPRWEQTLLSDYPSFNFHDPSFFRELLKQLNNVLLSLRFFLWLSSQPNFL 120
           ++EVCKVIR+KP+WEQTLLSDYPSFNFHDPSFFRELLKQLNN LLSLRFFLWLSSQP FL
Sbjct: 61  SKEVCKVIRSKPKWEQTLLSDYPSFNFHDPSFFRELLKQLNNALLSLRFFLWLSSQPEFL 120

Query: 121 PHPVSCNTLFDALLEAKACVPAKSFLHSFGFSPEPASLENYIRCVCEGGLVEEAVNVLDV 180
           PHPVSCNTLFDALLEAKACVPAKSFLHSFGFSPEPASLENYIRCVCEGGLVEEAVNV DV
Sbjct: 121 PHPVSCNTLFDALLEAKACVPAKSFLHSFGFSPEPASLENYIRCVCEGGLVEEAVNVFDV 180

Query: 181 LKGTGYRPSIETWNFALRSCLQFERTDLIWKLYEEMMKAGVQKDVGIETVGYLIQAFCSD 240
           LK  GYRPSIETWNFA +SCL+F RTDLIWKLY EMM+ GVQ DVGIETVGYLIQA CSD
Sbjct: 181 LKEAGYRPSIETWNFAFQSCLKFGRTDLIWKLYAEMMETGVQADVGIETVGYLIQALCSD 240

Query: 241 NKVSRAYELLRQALEDGLAPCNDAF 266
           N VS+AYELLRQALEDGLAP NDAF
Sbjct: 241 NNVSKAYELLRQALEDGLAPSNDAF 265

[Close]

BLAST of Bhi01G000299 vs. NCBI nr
Match: XP_022924328.1 (pentatricopeptide repeat-containing protein At5g18950-like [Cucurbita moschata] >XP_022924329.1 pentatricopeptide repeat-containing protein At5g18950-like [Cucurbita moschata])

HSP 1 Score: 471.1 bits (1211), Expect = 5.7e-129
Identity = 232/265 (87.55%), Postives = 242/265 (91.32%), Query Frame = 0


Query: 1   MANITSLMISIRQNSRFAKNLRIHIRNLSVETNGGNKGYEEIEPSEKLLNPTRRQDVSEI 60
           MANITSLMISIRQNSR  KNL IHIRNLSVE NGG  G EEI  SEKLLNPT  QDV+EI
Sbjct: 1   MANITSLMISIRQNSRLVKNLGIHIRNLSVEMNGGKDGCEEINLSEKLLNPTHCQDVTEI 60

Query: 61  AEEVCKVIRNKPRWEQTLLSDYPSFNFHDPSFFRELLKQLNNVLLSLRFFLWLSSQPNFL 120
           ++EVCKVIR+KP+WEQTLLSDYPSFNFHDPSFFRELLKQLNNVLLSLRFFLWLSSQP FL
Sbjct: 61  SKEVCKVIRSKPKWEQTLLSDYPSFNFHDPSFFRELLKQLNNVLLSLRFFLWLSSQPEFL 120

Query: 121 PHPVSCNTLFDALLEAKACVPAKSFLHSFGFSPEPASLENYIRCVCEGGLVEEAVNVLDV 180
           PHPVSCNTLFDALLEAKACVPAKSFLHSFGFSPEPASLENYIRCVCEGGLVEEAVNV DV
Sbjct: 121 PHPVSCNTLFDALLEAKACVPAKSFLHSFGFSPEPASLENYIRCVCEGGLVEEAVNVFDV 180

Query: 181 LKGTGYRPSIETWNFALRSCLQFERTDLIWKLYEEMMKAGVQKDVGIETVGYLIQAFCSD 240
           LK  GYRPSIETWNFA +SCL+F RTDLIWKLY EMM+ GVQ +VGIETVGYLIQA CSD
Sbjct: 181 LKEAGYRPSIETWNFAFQSCLKFGRTDLIWKLYAEMMETGVQANVGIETVGYLIQALCSD 240

Query: 241 NKVSRAYELLRQALEDGLAPCNDAF 266
           N VS+AYELLRQALEDGLAP NDAF
Sbjct: 241 NNVSKAYELLRQALEDGLAPSNDAF 265

[Close]

BLAST of Bhi01G000299 vs. NCBI nr
Match: XP_008437970.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g18950 [Cucumis melo])

HSP 1 Score: 468.8 bits (1205), Expect = 2.9e-128
Identity = 228/265 (86.04%), Postives = 241/265 (90.94%), Query Frame = 0


Query: 1   MANITSLMISIRQNSRFAKNLRIHIRNLSVETNGGNKGYEEIEPSEKLLNPTRRQDVSEI 60
           M N+TSLMISIRQNSRF K+LRIHIRNLSVETNGGN G EEIE SEKLLN T R+DVSEI
Sbjct: 1   MVNLTSLMISIRQNSRFVKSLRIHIRNLSVETNGGNNGREEIESSEKLLNLTHRKDVSEI 60

Query: 61  AEEVCKVIRNKPRWEQTLLSDYPSFNFHDPSFFRELLKQLNNVLLSLRFFLWLSSQPNFL 120
           A EV KVIR+KPRWEQ+LLSDYPSFNFHDPSFF ELLKQLNNV LSLRFFLWLSSQP FL
Sbjct: 61  AAEVGKVIRSKPRWEQSLLSDYPSFNFHDPSFFSELLKQLNNVFLSLRFFLWLSSQPEFL 120

Query: 121 PHPVSCNTLFDALLEAKACVPAKSFLHSFGFSPEPASLENYIRCVCEGGLVEEAVNVLDV 180
           PHPVSCN LFDALLEAKAC PAKSFLHSF FSPEPASLENYIRCVCEGG+VEEAV + DV
Sbjct: 121 PHPVSCNKLFDALLEAKACAPAKSFLHSFDFSPEPASLENYIRCVCEGGIVEEAVKIFDV 180

Query: 181 LKGTGYRPSIETWNFALRSCLQFERTDLIWKLYEEMMKAGVQKDVGIETVGYLIQAFCSD 240
           LK  GY PS+ETWNFA +SCL+F RTDLIWKLYEEMM+AGVQKDV IETVGYLIQAFC+D
Sbjct: 181 LKEAGYHPSVETWNFAFQSCLKFGRTDLIWKLYEEMMEAGVQKDVDIETVGYLIQAFCND 240

Query: 241 NKVSRAYELLRQALEDGLAPCNDAF 266
           NKVSRAYE+LRQ LEDGLAPCNDAF
Sbjct: 241 NKVSRAYEILRQVLEDGLAPCNDAF 265

[Close]

BLAST of Bhi01G000299 vs. NCBI nr
Match: KGN56465.1 (hypothetical protein Csa_3G120440 [Cucumis sativus])

HSP 1 Score: 461.8 bits (1187), Expect = 3.5e-126
Identity = 226/265 (85.28%), Postives = 240/265 (90.57%), Query Frame = 0


Query: 1   MANITSLMISIRQNSRFAKNLRIHIRNLSVETNGGNKGYEEIEPSEKLLNPTRRQDVSEI 60
           M N+TSLMISIRQNSRF KNLRIHIRNLSVETNGGN G EEIE SEKLLN T+R+DVSEI
Sbjct: 1   MVNLTSLMISIRQNSRFVKNLRIHIRNLSVETNGGNNGREEIESSEKLLNLTQRKDVSEI 60

Query: 61  AEEVCKVIRNKPRWEQTLLSDYPSFNFHDPSFFRELLKQLNNVLLSLRFFLWLSSQPNFL 120
           A EV KVIR+KPRWEQ+LLSDYPSFNFHDPSFF ELLKQLNNV LSLRFFLWLSSQP FL
Sbjct: 61  AAEVGKVIRSKPRWEQSLLSDYPSFNFHDPSFFSELLKQLNNVFLSLRFFLWLSSQPEFL 120

Query: 121 PHPVSCNTLFDALLEAKACVPAKSFLHSFGFSPEPASLENYIRCVCEGGLVEEAVNVLDV 180
           PHPVSCN LFDALLEAKACVPAKSFL+SF FSPEPASLENYIRCVCEGGLVEEAV   D+
Sbjct: 121 PHPVSCNKLFDALLEAKACVPAKSFLYSFEFSPEPASLENYIRCVCEGGLVEEAVYTFDM 180

Query: 181 LKGTGYRPSIETWNFALRSCLQFERTDLIWKLYEEMMKAGVQKDVGIETVGYLIQAFCSD 240
           LK  GYRP +ETWNFA +SCL+F RTDLIWKLYE MM+ GVQKDV IETVGYLIQAFC+D
Sbjct: 181 LKEAGYRPYVETWNFAFQSCLKFGRTDLIWKLYEGMMETGVQKDVDIETVGYLIQAFCND 240

Query: 241 NKVSRAYELLRQALEDGLAPCNDAF 266
           NKVSRAYE+LRQ+LEDGL PCNDAF
Sbjct: 241 NKVSRAYEILRQSLEDGLTPCNDAF 265

The following BLAST results are available for this feature:

BLAST of Bhi01G000299 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G18950.1	2.0e-51	44.62	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G25630.2	2.0e-06	29.91	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G15630.1	1.4e-04	25.74	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT2G17670.1	2.4e-04	25.00	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

BLAST of Bhi01G000299 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8GYM2\|PP393_ARATH	3.6e-50	44.62	Pentatricopeptide repeat-containing protein At5g18950 OS=Arabidopsis thaliana OX...	[more]
sp\|Q8GZ63\|PP397_ARATH	3.6e-05	29.91	Pentatricopeptide repeat-containing protein At5g25630 OS=Arabidopsis thaliana OX...	[more]

BLAST of Bhi01G000299 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3AVU1\|A0A1S3AVU1_CUCME	1.9e-128	86.04	pentatricopeptide repeat-containing protein At5g18950 OS=Cucumis melo OX=3656 GN...	[more]
tr\|A0A0A0L3A3\|A0A0A0L3A3_CUCSA	2.3e-126	85.28	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G120440 PE=4 SV=1	[more]
tr\|A0A2N9IWQ4\|A0A2N9IWQ4_FAGSY	2.9e-76	57.79	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS56890 PE=4 SV=1	[more]
tr\|A0A2I4F2U4\|A0A2I4F2U4_9ROSI	2.3e-73	57.20	pentatricopeptide repeat-containing protein At5g18950 OS=Juglans regia OX=51240 ...	[more]
tr\|A0A2P4MFI7\|A0A2P4MFI7_QUESU	3.3e-72	57.03	Pentatricopeptide repeat-containing protein OS=Quercus suber OX=58331 GN=CFP56_4...	[more]

BLAST of Bhi01G000299 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022979328.1	1.5e-129	87.55	pentatricopeptide repeat-containing protein At5g18950-like [Cucurbita maxima]	[more]
XP_023527514.1	2.6e-129	87.55	pentatricopeptide repeat-containing protein At5g18950-like [Cucurbita pepo subsp...	[more]
XP_022924328.1	5.7e-129	87.55	pentatricopeptide repeat-containing protein At5g18950-like [Cucurbita moschata] ...	[more]
XP_008437970.1	2.9e-128	86.04	PREDICTED: pentatricopeptide repeat-containing protein At5g18950 [Cucumis melo]	[more]
KGN56465.1	3.5e-126	85.28	hypothetical protein Csa_3G120440 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR011990	TPR-like_helical_dom_sf
IPR002885	Pentatricopeptide_repeat

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007059	chromosome segregation
biological_process	GO:0006259	DNA metabolic process
biological_process	GO:0007127	meiosis I
biological_process	GO:0050794	regulation of cellular process
biological_process	GO:0050896	response to stimulus
biological_process	GO:0044710	single-organism metabolic process
biological_process	GO:0051276	chromosome organization
biological_process	GO:0065007	biological regulation
biological_process	GO:0007126	meiotic nuclear division
biological_process	GO:0045132	meiotic chromosome segregation
biological_process	GO:0033044	regulation of chromosome organization
biological_process	GO:0000723	telomere maintenance
biological_process	GO:0008150	biological_process
cellular_component	GO:0016020	membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi01M000299	Bhi01M000299	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF12854	PPR_1	coord: 403..428 e-value: 5.6E-8 score: 32.3
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 404..436 e-value: 3.7E-7 score: 27.9 coord: 368..398 e-value: 2.1E-11 score: 41.3 coord: 474..505 e-value: 3.5E-5 score: 21.7 coord: 333..367 e-value: 6.0E-9 score: 33.5 coord: 438..471 e-value: 9.9E-8 score: 29.7 coord: 264..296 e-value: 0.0027 score: 15.7
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 192..221 e-value: 0.36 score: 11.1 coord: 513..537 e-value: 0.39 score: 11.0 coord: 231..258 e-value: 0.24 score: 11.6
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 436..484 e-value: 1.7E-13 score: 50.4 coord: 264..309 e-value: 5.5E-9 score: 36.0 coord: 330..379 e-value: 2.8E-14 score: 52.9
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 401..435 score: 9.942
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 296..330 score: 10.665
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 189..223 score: 9.153
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 436..470 score: 13.296
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 541..575 score: 7.673
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 471..505 score: 10.742
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 506..540 score: 7.552
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 226..260 score: 8.824
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 331..365 score: 11.674
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 261..295 score: 8.265
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 154..188 score: 8.013
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 366..400 score: 13.866
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 228..355 e-value: 3.3E-24 score: 88.0
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 357..430 e-value: 8.4E-21 score: 76.3 coord: 502..602 e-value: 3.0E-6 score: 28.8 coord: 431..501 e-value: 1.1E-17 score: 66.1
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 41..600
None	No IPR available	PANTHER	PTHR24015:SF848	SUBFAMILY NOT NAMED	coord: 41..600
None	No IPR available	SUPERFAMILY	SSF81901	HCP-like	coord: 241..469

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Bhi01G000299	Csa3G120440	Cucumber (Chinese Long) v2	cuwgoB284
Bhi01G000299	MELO3C006065	Melon (DHL92) v3.5.1	mewgoB540
Bhi01G000299	ClCG05G001120	Watermelon (Charleston Gray)	wcgwgoB439
Bhi01G000299	CSPI03G08330	Wild cucumber (PI 183967)	cpiwgoB284
Bhi01G000299	Cucsa.258850	Cucumber (Gy14) v1	cgywgoB514
Bhi01G000299	CmaCh14G020780	Cucurbita maxima (Rimu)	cmawgoB0315
Bhi01G000299	CmoCh14G021360	Cucurbita moschata (Rifu)	cmowgoB0303
Bhi01G000299	Lsi05G020850	Bottle gourd (USVL1VR-Ls)	lsiwgoB433
Bhi01G000299	Cp4.1LG03g16420	Cucurbita pepo (Zucchini)	cpewgoB0770
Bhi01G000299	CsGy3G008450	Cucumber (Gy14) v2	cgybwgoB272
Bhi01G000299	MELO3C006065.2	Melon (DHL92) v3.6.1	medwgoB542
Bhi01G000299	Carg20968	Silver-seed gourd	carwgoB0595
Bhi01G000299	CsaV3_3G008450	Cucumber (Chinese Long) v3	cucwgoB288
Bhi01G000299	Cla021194	Watermelon (97103) v1	wgowmB212

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi01G000299	Wax gourd	wgowgoB053
Bhi01G000299	Cucurbita maxima (Rimu)	cmawgoB0007
Bhi01G000299	Cucurbita maxima (Rimu)	cmawgoB1010
Bhi01G000299	Cucurbita moschata (Rifu)	cmowgoB1013
Bhi01G000299	Cucurbita pepo (Zucchini)	cpewgoB1105
Bhi01G000299	Watermelon (Charleston Gray)	wcgwgoB437
Bhi01G000299	Watermelon (97103) v2	wgowmbB191
Bhi01G000299	Silver-seed gourd	carwgoB1162