MELO3C006057 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C006057
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionSodium/glucose cotransporter 2
Locationchr6 : 820035 .. 820235 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCAAGAAAGAAGAAGAAGAGGATGAGTATCACCTTATAGGCGAACCGGTGACCGGAGACCCGCCGGAATTCCGATCATCCGATGAGAAGAAGTTGATGGAAAATGCGAGAGTGAGACAGAGGAGGAAGAAGAGTGAGTCTTGTGACGGTGGCGGAAATTTGGGTATGCAAGGCCTTTCGATTGATTGCGTCACATAA

mRNA sequence

ATGATCAAGAAAGAAGAAGAAGAGGATGAGTATCACCTTATAGGCGAACCGGTGACCGGAGACCCGCCGGAATTCCGATCATCCGATGAGAAGAAGTTGATGGAAAATGCGAGAGTGAGACAGAGGAGGAAGAAGAGTGAGTCTTGTGACGGTGGCGGAAATTTGGGTATGCAAGGCCTTTCGATTGATTGCGTCACATAA

Coding sequence (CDS)

ATGATCAAGAAAGAAGAAGAAGAGGATGAGTATCACCTTATAGGCGAACCGGTGACCGGAGACCCGCCGGAATTCCGATCATCCGATGAGAAGAAGTTGATGGAAAATGCGAGAGTGAGACAGAGGAGGAAGAAGAGTGAGTCTTGTGACGGTGGCGGAAATTTGGGTATGCAAGGCCTTTCGATTGATTGCGTCACATAA

Protein sequence

MIKKEEEEDEYHLIGEPVTGDPPEFRSSDEKKLMENARVRQRRKKSESCDGGGNLGMQGLSIDCVT*
Homology
[Close]
BLAST of MELO3C006057 vs. TrEMBL
Match: A0A0A0L794_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G120360 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 3.4e-25
Identity = 61/67 (91.04%), Postives = 62/67 (92.54%), Query Frame = 1 

Query: 1  MIKKEEEEDEYHLIGEPVTGDPPEFRSSDEKKLMENARVRQRRK-KSESCDGGGNLGMQG 60
          MIKKEEE+DEYHL GEPVT DPPEFRSSDEKKLMENARVRQRRK  SESCDGGGNLGMQ 
Sbjct: 1  MIKKEEEDDEYHLRGEPVTEDPPEFRSSDEKKLMENARVRQRRKTSSESCDGGGNLGMQC 60

Query: 61 LSIDCVT 67
          LSIDCVT
Sbjct: 61 LSIDCVT 67

[Close]
BLAST of MELO3C006057 vs. NCBI nr
Match: gi|700201324|gb|KGN56457.1| (hypothetical protein Csa_3G120360 [Cucumis sativus])

HSP 1 Score: 121.7 bits (304), Expect = 4.9e-25
Identity = 61/67 (91.04%), Postives = 62/67 (92.54%), Query Frame = 1 

Query: 1  MIKKEEEEDEYHLIGEPVTGDPPEFRSSDEKKLMENARVRQRRK-KSESCDGGGNLGMQG 60
          MIKKEEE+DEYHL GEPVT DPPEFRSSDEKKLMENARVRQRRK  SESCDGGGNLGMQ 
Sbjct: 1  MIKKEEEDDEYHLRGEPVTEDPPEFRSSDEKKLMENARVRQRRKTSSESCDGGGNLGMQC 60

Query: 61 LSIDCVT 67
          LSIDCVT
Sbjct: 61 LSIDCVT 67

The following BLAST results are available for this feature:
BLAST of MELO3C006057 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L794_CUCSA3.4e-2591.04Uncharacterized protein OS=Cucumis sativus GN=Csa_3G120360 PE=4 SV=1[more]
BLAST of MELO3C006057 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700201324|gb|KGN56457.1|4.9e-2591.04hypothetical protein Csa_3G120360 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU49840melon EST collection version 4.0transcribed_cluster
MU55064melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C006057T1MELO3C006057T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU55064MU55064transcribed_cluster
MU49840MU49840transcribed_cluster


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C006057Cla021186Watermelon (97103) v1mewmB461
MELO3C006057Cla97C05G081340Watermelon (97103) v2mewmbB434
MELO3C006057CsaV3_3G008380Cucumber (Chinese Long) v3cucmeB236
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C006057Cucumber (Chinese Long) v3cucmeB411
MELO3C006057Cucumber (Chinese Long) v3cucmeB511
MELO3C006057Watermelon (97103) v2mewmbB421
MELO3C006057Watermelon (97103) v2mewmbB439
MELO3C006057Watermelon (97103) v2mewmbB447
MELO3C006057Wax gourdmewgoB523
MELO3C006057Wax gourdmewgoB540
MELO3C006057Wax gourdmewgoB550
MELO3C006057Melon (DHL92) v3.5.1memeB018
MELO3C006057Melon (DHL92) v3.5.1memeB055
MELO3C006057Melon (DHL92) v3.5.1memeB150
MELO3C006057Melon (DHL92) v3.5.1memeB151
MELO3C006057Cucumber (Gy14) v1cgymeB139
MELO3C006057Cucumber (Gy14) v1cgymeB223
MELO3C006057Cucumber (Gy14) v1cgymeB439
MELO3C006057Cucurbita maxima (Rimu)cmameB000
MELO3C006057Cucurbita maxima (Rimu)cmameB242
MELO3C006057Cucurbita maxima (Rimu)cmameB770
MELO3C006057Cucurbita moschata (Rifu)cmomeB230
MELO3C006057Cucurbita moschata (Rifu)cmomeB755
MELO3C006057Wild cucumber (PI 183967)cpimeB230
MELO3C006057Wild cucumber (PI 183967)cpimeB291
MELO3C006057Wild cucumber (PI 183967)cpimeB399
MELO3C006057Wild cucumber (PI 183967)cpimeB502
MELO3C006057Cucumber (Chinese Long) v2cumeB297
MELO3C006057Cucumber (Chinese Long) v2cumeB236
MELO3C006057Cucumber (Chinese Long) v2cumeB402
MELO3C006057Watermelon (Charleston Gray)mewcgB420
MELO3C006057Watermelon (Charleston Gray)mewcgB427
MELO3C006057Watermelon (Charleston Gray)mewcgB430
MELO3C006057Watermelon (Charleston Gray)mewcgB440
MELO3C006057Watermelon (97103) v1mewmB478
MELO3C006057Watermelon (97103) v1mewmB466
MELO3C006057Cucurbita pepo (Zucchini)cpemeB585
MELO3C006057Cucurbita pepo (Zucchini)cpemeB698
MELO3C006057Cucurbita pepo (Zucchini)cpemeB815
MELO3C006057Bottle gourd (USVL1VR-Ls)lsimeB031
MELO3C006057Bottle gourd (USVL1VR-Ls)lsimeB037
MELO3C006057Bottle gourd (USVL1VR-Ls)lsimeB378
MELO3C006057Cucumber (Gy14) v2cgybmeB200
MELO3C006057Cucumber (Gy14) v2cgybmeB252
MELO3C006057Cucumber (Gy14) v2cgybmeB349
MELO3C006057Cucumber (Gy14) v2cgybmeB439
MELO3C006057Silver-seed gourdcarmeB0497
MELO3C006057Silver-seed gourdcarmeB0607
MELO3C006057Silver-seed gourdcarmeB0968
MELO3C006057Cucumber (Chinese Long) v3cucmeB297