MELO3C006057T1 (mRNA) Melon (DHL92) v3.5.1

Overview
NameMELO3C006057T1
TypemRNA
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionSodium/glucose cotransporter 2
Locationchr6 : 820035 .. 820235 (-)
Sequence length201
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCAAGAAAGAAGAAGAAGAGGATGAGTATCACCTTATAGGCGAACCGGTGACCGGAGACCCGCCGGAATTCCGATCATCCGATGAGAAGAAGTTGATGGAAAATGCGAGAGTGAGACAGAGGAGGAAGAAGAGTGAGTCTTGTGACGGTGGCGGAAATTTGGGTATGCAAGGCCTTTCGATTGATTGCGTCACATAA

mRNA sequence

ATGATCAAGAAAGAAGAAGAAGAGGATGAGTATCACCTTATAGGCGAACCGGTGACCGGAGACCCGCCGGAATTCCGATCATCCGATGAGAAGAAGTTGATGGAAAATGCGAGAGTGAGACAGAGGAGGAAGAAGAGTGAGTCTTGTGACGGTGGCGGAAATTTGGGTATGCAAGGCCTTTCGATTGATTGCGTCACATAA

Coding sequence (CDS)

ATGATCAAGAAAGAAGAAGAAGAGGATGAGTATCACCTTATAGGCGAACCGGTGACCGGAGACCCGCCGGAATTCCGATCATCCGATGAGAAGAAGTTGATGGAAAATGCGAGAGTGAGACAGAGGAGGAAGAAGAGTGAGTCTTGTGACGGTGGCGGAAATTTGGGTATGCAAGGCCTTTCGATTGATTGCGTCACATAA

Protein sequence

MIKKEEEEDEYHLIGEPVTGDPPEFRSSDEKKLMENARVRQRRKKSESCDGGGNLGMQGLSIDCVT*
Homology
[Close]
BLAST of MELO3C006057T1 vs. TrEMBL
Match: A0A0A0L794_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G120360 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 3.4e-25
Identity = 61/67 (91.04%), Postives = 62/67 (92.54%), Query Frame = 1 

Query: 1  MIKKEEEEDEYHLIGEPVTGDPPEFRSSDEKKLMENARVRQRRK-KSESCDGGGNLGMQG 60
          MIKKEEE+DEYHL GEPVT DPPEFRSSDEKKLMENARVRQRRK  SESCDGGGNLGMQ 
Sbjct: 1  MIKKEEEDDEYHLRGEPVTEDPPEFRSSDEKKLMENARVRQRRKTSSESCDGGGNLGMQC 60

Query: 61 LSIDCVT 67
          LSIDCVT
Sbjct: 61 LSIDCVT 67

[Close]
BLAST of MELO3C006057T1 vs. NCBI nr
Match: gi|700201324|gb|KGN56457.1| (hypothetical protein Csa_3G120360 [Cucumis sativus])

HSP 1 Score: 121.7 bits (304), Expect = 4.9e-25
Identity = 61/67 (91.04%), Postives = 62/67 (92.54%), Query Frame = 1 

Query: 1  MIKKEEEEDEYHLIGEPVTGDPPEFRSSDEKKLMENARVRQRRK-KSESCDGGGNLGMQG 60
          MIKKEEE+DEYHL GEPVT DPPEFRSSDEKKLMENARVRQRRK  SESCDGGGNLGMQ 
Sbjct: 1  MIKKEEEDDEYHLRGEPVTEDPPEFRSSDEKKLMENARVRQRRKTSSESCDGGGNLGMQC 60

Query: 61 LSIDCVT 67
          LSIDCVT
Sbjct: 61 LSIDCVT 67

The following BLAST results are available for this feature:
BLAST of MELO3C006057T1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L794_CUCSA3.4e-2591.04Uncharacterized protein OS=Cucumis sativus GN=Csa_3G120360 PE=4 SV=1[more]
BLAST of MELO3C006057T1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700201324|gb|KGN56457.1|4.9e-2591.04hypothetical protein Csa_3G120360 [Cucumis sativus][more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MELO3C006057MELO3C006057gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MELO3C006057T1MELO3C006057T1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C006057T1.cds1MELO3C006057T1.cds1CDS