MU55064 (transcribed_cluster) Melon (DHL92) v3.5.1

NameMU55064
Typetranscribed_cluster
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionLate embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Locationchr6 : 820098 .. 820655 (+)
Sequence length558
The following sequences are available for this feature:

transcribed_cluster sequence

ACTCTTCTTCCTCCTCTGTCTCACTCTCGCATTTTCCATCAACTTCTTCTCATCGGATGATCGGAATTCCGGCGGGTCTCCGGTCACCGGTTCGCCTATAAGGTGATACTCATCCTCTTCTTCTTCTTTCTTGATCATTTCCGTTCTCCTGATTGCCAGAGATATGTTCGGTTCAGTTGCACATTACAGTGAGATGGAATTCCATTTTTTCTCTCTTTCTTTCCCAAGGAAAACGAAATTCTCTATTACATTTCATATTATTTAATGCGATGCATGTATTTGACTGATTAACTGAATTGATTCGGTTCCTTTTTCTTCGTCTCGTTTTCTGCATTGATTTTTGATTTCTACTGTAATAAATCAGATTTCCGTGAAGAATTTGTTGTGTAGTTCAGAGAATATGGCAGAGCCGACGCCATTGAAACCTATCCTCCAGAAGCCTCCGGGGTTTAAAGATCCAAATCACACTGCTCTGCCGGTGCCGAGACCGCCGGCGAGAAAACTGATATTACCGTCGCCTTTTAGCCAGAAGAAACAAGAAGCGACGGAGCTGCTGGC
Library categoryESTs
melon 15d library1
BLAST of MU55064 vs. TrEMBL
Match: A0A0A0L3Z7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G120370 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 2.3e-15
Identity = 41/47 (87.23%), Postives = 43/47 (91.49%), Query Frame = 2

Query: 401 MAEPTPLKPILQKPPGFKDPNHTALPVPRPPARKLILPSPFSQKKQE 460
           MAEP PLKPILQKPPGFKDPNH ALPVPRPPARKLILPSP SQK ++
Sbjct: 1   MAEPPPLKPILQKPPGFKDPNHIALPVPRPPARKLILPSPLSQKNKK 47

Query: 461 520
           
Sbjct: 61  47

Query: 521 542
           
Sbjct: 121 47

BLAST of MU55064 vs. NCBI nr
Match: gi|659075079|ref|XP_008437954.1| (PREDICTED: protein YLS9-like isoform X1 [Cucumis melo])

HSP 1 Score: 99.0 bits (245), Expect = 9.3e-18
Identity = 47/51 (92.16%), Postives = 49/51 (96.08%), Query Frame = 2

Query: 389 SSENMAEPTPLKPILQKPPGFKDPNHTALPVPRPPARKLILPSPFSQKKQE 448
           SSENMAEPTPLKPILQKPPGFKDPNHTALPVPRPPARKLILPSP SQK ++
Sbjct: 65  SSENMAEPTPLKPILQKPPGFKDPNHTALPVPRPPARKLILPSPLSQKNKK 115

Query: 449 508
           
Sbjct: 125 115

Query: 509 542
           
Sbjct: 185 115

BLAST of MU55064 vs. NCBI nr
Match: gi|659075081|ref|XP_008437955.1| (PREDICTED: protein YLS9-like isoform X2 [Cucumis melo])

HSP 1 Score: 91.3 bits (225), Expect = 1.9e-15
Identity = 43/47 (91.49%), Postives = 45/47 (95.74%), Query Frame = 2

Query: 401 MAEPTPLKPILQKPPGFKDPNHTALPVPRPPARKLILPSPFSQKKQE 460
           MAEPTPLKPILQKPPGFKDPNHTALPVPRPPARKLILPSP SQK ++
Sbjct: 1   MAEPTPLKPILQKPPGFKDPNHTALPVPRPPARKLILPSPLSQKNKK 47

Query: 461 520
           
Sbjct: 61  47

Query: 521 542
           
Sbjct: 121 47

BLAST of MU55064 vs. NCBI nr
Match: gi|778677027|ref|XP_011650715.1| (PREDICTED: uncharacterized protein LOC101214208 [Cucumis sativus])

HSP 1 Score: 86.7 bits (213), Expect = 4.8e-14
Identity = 41/47 (87.23%), Postives = 43/47 (91.49%), Query Frame = 2

Query: 401 MAEPTPLKPILQKPPGFKDPNHTALPVPRPPARKLILPSPFSQKKQE 460
           MAEP PLKPILQKPPGFKDPNH ALPVPRPPARKLILPSP SQK ++
Sbjct: 1   MAEPPPLKPILQKPPGFKDPNHIALPVPRPPARKLILPSPLSQKNKK 47

Query: 461 520
           
Sbjct: 61  47

Query: 521 542
           
Sbjct: 121 47

BLAST of MU55064 vs. NCBI nr
Match: gi|700201324|gb|KGN56457.1| (hypothetical protein Csa_3G120360 [Cucumis sativus])

HSP 1 Score: 70.9 bits (172), Expect = 2.7e-09
Identity = 37/46 (80.43%), Postives = 37/46 (80.43%), Query Frame = -1

Query: 1   MIKKXXXXXXYHLIGEPVTGDPPEFRSSDEKKLMENARVRQRRKKS 60
           MIKK      YHL GEPVT DPPEFRSSDEKKLMENARVRQRRK S
Sbjct: 1   MIKKEEEDDEYHLRGEPVTEDPPEFRSSDEKKLMENARVRQRRKTS 46

Query: 61  120
           
Sbjct: 61  46

Query: 121 139
           
Sbjct: 121 46

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0L3Z7_CUCSA2.3e-1587.23Uncharacterized protein OS=Cucumis sativus GN=Csa_3G120370 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|659075079|ref|XP_008437954.1|9.3e-1892.16PREDICTED: protein YLS9-like isoform X1 [Cucumis melo][more]
gi|659075081|ref|XP_008437955.1|1.9e-1591.49PREDICTED: protein YLS9-like isoform X2 [Cucumis melo][more]
gi|778677027|ref|XP_011650715.1|4.8e-1487.23PREDICTED: uncharacterized protein LOC101214208 [Cucumis sativus][more]
gi|700201324|gb|KGN56457.1|2.7e-0980.43hypothetical protein Csa_3G120360 [Cucumis sativus][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
MELO3C006056MELO3C006056gene
MELO3C006057MELO3C006057gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
15D14G1115D14G11EST