MELO3C005959.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C005959.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	protein transport protein Sec61 subunit beta
Location	chr06 : 245855 .. 247586 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATAGAAGAAAAGAAAAGAAAAGTTAGAATTAGCATTCCCTTCTGAATTCCAATTCCATCTCCCCATTCCAAACAAACAACTCTTCTTCGATTTTGTCTCAGGCAAGTCCTCTCCTATCTCTCTTCTACTTCCATGAATCCATCATGAACCAACCTGATCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATTTTTTTTCATACGATTTGGTAAATTAGGGTTTCCTAACCATTCTAATTTTTTTCATACGATTTGGTCGTTGTCGTGGTCGTCAGATCTGGATTCATTCTATTTTATTTTTTGCTAATTATCAGTTCGAGTAAATTATATTATTTGCGCCTCTTGAGAATGTTCGTTTATACATATGCTTTGTTTTCCATCTCGATTTTCTTTTGCGAAACAGATCTCCCTCTTTACTCAAAACTAATTACCCTCCCCCTTTCCTCCTTGTTTTTGTTCAGTTTGGCGCTAATCTGTGGTGGCTGTTATAAAAAATTAGGGCTCCAAATTGTTTCTTCTGTTGTTAATTTATCGGTCGATTATATGTTTTAATTTACAAACTCTAACTTTTAGGGAGTGTTTGAGGCCTCGCGCATTTTCTGGTTCGAGGCCTTGGGGAAGTCTAGGATCTAATAGTTTTTTTTCTTCAAGAACAAAATCGTTAATTTAGCTTCTGATTCCATGCATAGTTTGGTACCTTGCGTTCTAATTTTCTTTGAAACTATTGATCTGAATCAGTTCCGAGTCTGTCAACATTTAATCTCAATTCATGCAGTATGGCCTACCAATTGGTTTAATTACGCAGTACCTAGTTTTAGGGGTTCAAAGTTCATTCTTTCGTATGTCGAGAGAATCCATATTCATGTTAACGAACATTTGCACGGATTTTTGGAGTTCTAGGTAGATCAAAGTTCATTGTTTCGTGTGATGGAGATTGTCTTGTTAGATAATGAAGTTTTGATAACCTGATTTGAGAAAGGTCAGGGAAGGAATGGAAGGTTTGGAGGTTAACATTCCTTCCTACCTACATGTTCATATTTGATTCAGAAGTGCTCAACAAGGGATGTCTCCCGTTCCCGATATCAATTGTCAGCTTGAAAGTTTCTAAATTTTCATTCTCTTTGTCGATACAGAATGGCTTTAGGTGGAGGTCCCCAGAGAGGAAGTGCGGCAGCTACTGCCAGCATGCGCAGGAGAAGAACAACAAGTTCTGGTACATCTGGAGGTGCAGCTGGAACAATGCTGCAGTTTTACACGGATGATGCTCCTGGACTCAAGATATCCCCCAATGTTGTTCTCGTCATGAGCATTGGTTTCATTGCTTTTGTTGCCGTTCTCCATGTTATGGGTAAGCTGTACTTCGTGCGAAGAGAAGCCTAGAGGGTTTTCCCCTGATAAAAGTGTGATGCATATTTAAATTCATTGTGGCAAAAGTTTAATTTTGAACTGAACTCTCGTTTGTCATTACAGTCAAAACTAATTTCGATTTTGTTACTAGTTAGAATGAAAGAGCTTTTCTGTTCTCTAAATTTTGCTTTTTCCGTTTGTTGATTATTCTTATGCTGCACATTAAAGCCCTACTGCAATTTATAACAATGACAACCGCCGGAGTGTAGAATCAGATTTGTTGTGGAAATGACAGTCAATTTCCATATTCTGCCTGTGTTATAATTGATATATTTAAGCAATAAGTTCTTAATAGTTTTTCTTTCTTC

mRNA sequence

AAATAGAAGAAAAGAAAAGAAAAGTTAGAATTAGCATTCCCTTCTGAATTCCAATTCCATCTCCCCATTCCAAACAAACAACTCTTCTTCGATTTTGTCTCAGAATGGCTTTAGGTGGAGGTCCCCAGAGAGGAAGTGCGGCAGCTACTGCCAGCATGCGCAGGAGAAGAACAACAAGTTCTGGTACATCTGGAGGTGCAGCTGGAACAATGCTGCAGTTTTACACGGATGATGCTCCTGGACTCAAGATATCCCCCAATGTTGTTCTCGTCATGAGCATTGGTTTCATTGCTTTTGTTGCCGTTCTCCATGTTATGGCCCTACTGCAATTTATAACAATGACAACCGCCGGAGTGTAGAATCAGATTTGTTGTGGAAATGACAGTCAATTTCCATATTCTGCCTGTGTTATAATTGATATATTTAAGCAATAAGTTCTTAATAGTTTTTCTTTCTTC

Coding sequence (CDS)

ATGGCTTTAGGTGGAGGTCCCCAGAGAGGAAGTGCGGCAGCTACTGCCAGCATGCGCAGGAGAAGAACAACAAGTTCTGGTACATCTGGAGGTGCAGCTGGAACAATGCTGCAGTTTTACACGGATGATGCTCCTGGACTCAAGATATCCCCCAATGTTGTTCTCGTCATGAGCATTGGTTTCATTGCTTTTGTTGCCGTTCTCCATGTTATGGCCCTACTGCAATTTATAACAATGACAACCGCCGGAGTGTAG

Protein sequence

MALGGGPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMALLQFITMTTAGV

Homology

[Close]

BLAST of MELO3C005959.2 vs. NCBI nr
Match: XP_011650635.1 (PREDICTED: protein transport protein Sec61 subunit beta [Cucumis sativus] >KGN56357.1 hypothetical protein Csa_3G117430 [Cucumis sativus])

HSP 1 Score: 72.8 bits (177), Expect = 6.3e-10
Identity = 38/42 (90.48%), Postives = 39/42 (92.86%), Query Frame = 0


Query: 36 MLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMALLQFI 78
          MLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVM  L F+
Sbjct: 37 MLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFV 78

[Close]

BLAST of MELO3C005959.2 vs. NCBI nr
Match: XP_006427859.1 (protein transport protein Sec61 subunit beta [Citrus clementina] >XP_006464569.1 protein transport protein Sec61 subunit beta isoform X2 [Citrus sinensis] >ESR41099.1 hypothetical protein CICLE_v10027536mg [Citrus clementina] >KDO53388.1 hypothetical protein CISIN_1g034675mg [Citrus sinensis])

HSP 1 Score: 72.8 bits (177), Expect = 6.3e-10
Identity = 38/42 (90.48%), Postives = 39/42 (92.86%), Query Frame = 0


Query: 36 MLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMALLQFI 78
          MLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVM  L F+
Sbjct: 43 MLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFV 84

[Close]

BLAST of MELO3C005959.2 vs. NCBI nr
Match: XP_008437786.1 (PREDICTED: protein transport protein Sec61 subunit beta [Cucumis melo])

HSP 1 Score: 72.8 bits (177), Expect = 6.3e-10
Identity = 38/42 (90.48%), Postives = 39/42 (92.86%), Query Frame = 0


Query: 36 MLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMALLQFI 78
          MLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVM  L F+
Sbjct: 36 MLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFV 77

[Close]

BLAST of MELO3C005959.2 vs. NCBI nr
Match: XP_010544608.1 (PREDICTED: protein transport protein Sec61 subunit beta [Tarenaya hassleriana])

HSP 1 Score: 72.8 bits (177), Expect = 6.3e-10
Identity = 38/42 (90.48%), Postives = 39/42 (92.86%), Query Frame = 0


Query: 36 MLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMALLQFI 78
          MLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVM  L F+
Sbjct: 37 MLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFV 78

[Close]

BLAST of MELO3C005959.2 vs. NCBI nr
Match: XP_010524405.1 (PREDICTED: protein transport protein Sec61 subunit beta [Tarenaya hassleriana] >XP_010524406.1 PREDICTED: protein transport protein Sec61 subunit beta [Tarenaya hassleriana])

HSP 1 Score: 72.8 bits (177), Expect = 6.3e-10
Identity = 38/42 (90.48%), Postives = 39/42 (92.86%), Query Frame = 0


Query: 36 MLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMALLQFI 78
          MLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVM  L F+
Sbjct: 39 MLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFV 80

[Close]

BLAST of MELO3C005959.2 vs. TAIR10
Match: AT3G60540.1 (Preprotein translocase Sec, Sec61-beta subunit protein)

HSP 1 Score: 72.4 bits (176), Expect = 1.5e-13
Identity = 37/42 (88.10%), Postives = 39/42 (92.86%), Query Frame = 0


Query: 36 MLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMALLQFI 78
          MLQFYTDDAPGLKISPNVVL+MSIGFIAFVAVLHVM  L F+
Sbjct: 37 MLQFYTDDAPGLKISPNVVLIMSIGFIAFVAVLHVMGKLYFV 78

[Close]

BLAST of MELO3C005959.2 vs. TAIR10
Match: AT2G45070.1 (Preprotein translocase Sec, Sec61-beta subunit protein)

HSP 1 Score: 68.9 bits (167), Expect = 1.7e-12
Identity = 35/40 (87.50%), Postives = 37/40 (92.50%), Query Frame = 0


Query: 38 QFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMALLQFI 78
          QFYTDDAPGLKISPNVVL+MSIGFIAFVAVLHVM  L F+
Sbjct: 42 QFYTDDAPGLKISPNVVLIMSIGFIAFVAVLHVMGKLYFV 81

[Close]

BLAST of MELO3C005959.2 vs. TAIR10
Match: AT5G60460.1 (Preprotein translocase Sec, Sec61-beta subunit protein)

HSP 1 Score: 55.1 bits (131), Expect = 2.5e-08
Identity = 28/39 (71.79%), Postives = 31/39 (79.49%), Query Frame = 0


Query: 36  MLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMALL 75
           ML+FYTDDAPGLKISP VVL+MS+ FI FV  LHV   L
Sbjct: 62  MLRFYTDDAPGLKISPTVVLIMSLCFIGFVTALHVFGKL 100

[Close]

BLAST of MELO3C005959.2 vs. Swiss-Prot
Match: sp|P38389|SC61B_ARATH (Protein transport protein Sec61 subunit beta OS=Arabidopsis thaliana OX=3702 GN=At2g45070 PE=1 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 3.0e-11
Identity = 35/40 (87.50%), Postives = 37/40 (92.50%), Query Frame = 0


Query: 38 QFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMALLQFI 78
          QFYTDDAPGLKISPNVVL+MSIGFIAFVAVLHVM  L F+
Sbjct: 42 QFYTDDAPGLKISPNVVLIMSIGFIAFVAVLHVMGKLYFV 81

[Close]

BLAST of MELO3C005959.2 vs. Swiss-Prot
Match: sp|A8I6P9|SC61B_CHLRE (Protein transport protein Sec61 subunit beta OS=Chlamydomonas reinhardtii OX=3055 GN=SEC61B PE=1 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 3.2e-05
Identity = 23/39 (58.97%), Postives = 29/39 (74.36%), Query Frame = 0


Query: 37 LQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMALLQ 76
          + FYTDD PG K+SP VV+ MS+ FIAFV +LHV+   Q
Sbjct: 51 MNFYTDDTPGWKMSPVVVITMSLSFIAFVTILHVVGKFQ 89

[Close]

BLAST of MELO3C005959.2 vs. Swiss-Prot
Match: sp|Q54YR4|SC61B_DICDI (Protein transport protein Sec61 subunit beta OS=Dictyostelium discoideum OX=44689 GN=sec61b PE=3 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 2.1e-04
Identity = 21/36 (58.33%), Postives = 29/36 (80.56%), Query Frame = 0


Query: 36 MLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVM 72
          M++FY++DA GLK+ P  VL MS+ FIAFV +LH+M
Sbjct: 20 MMKFYSEDAIGLKVGPTAVLFMSLIFIAFVIILHIM 55

[Close]

BLAST of MELO3C005959.2 vs. Swiss-Prot
Match: sp|O43002|SC61B_SCHPO (Protein transport protein sec61 subunit beta OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=sbh1 PE=3 SV=1)

HSP 1 Score: 44.7 bits (104), Expect = 6.0e-04
Identity = 20/37 (54.05%), Postives = 30/37 (81.08%), Query Frame = 0


Query: 36 MLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMA 73
          +L+ YTD+A G K+ P VV+V+S+GFIA V +LH++A
Sbjct: 57 LLKLYTDEASGFKVDPVVVMVLSVGFIASVFLLHIVA 93

[Close]

BLAST of MELO3C005959.2 vs. Swiss-Prot
Match: sp|Q9HFC7|SC61B_YARLI (Protein transport protein Sec61 subunit beta OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=SBH1 PE=3 SV=1)

HSP 1 Score: 44.3 bits (103), Expect = 7.9e-04
Identity = 20/37 (54.05%), Postives = 29/37 (78.38%), Query Frame = 0


Query: 36 MLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMA 73
          ML+ YTD++ GLK+ P VV+V+S+GFI  V  LH++A
Sbjct: 47 MLKLYTDESQGLKVDPVVVMVLSLGFIFSVVALHILA 83

[Close]

BLAST of MELO3C005959.2 vs. TrEMBL
Match: tr|V4UNS3|V4UNS3_9ROSI (Protein transport protein Sec61 subunit beta OS=Citrus clementina OX=85681 GN=CICLE_v10027536mg PE=3 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 4.2e-10
Identity = 38/42 (90.48%), Postives = 39/42 (92.86%), Query Frame = 0


Query: 36 MLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMALLQFI 78
          MLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVM  L F+
Sbjct: 43 MLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFV 84

[Close]

BLAST of MELO3C005959.2 vs. TrEMBL
Match: tr|A0A2J6LW80|A0A2J6LW80_LACSA (Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_7X10180 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 4.2e-10
Identity = 38/42 (90.48%), Postives = 39/42 (92.86%), Query Frame = 0


Query: 36  MLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMALLQFI 78
           MLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVM  L F+
Sbjct: 83  MLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFV 124

[Close]

BLAST of MELO3C005959.2 vs. TrEMBL
Match: tr|A0A2J6JK13|A0A2J6JK13_LACSA (Protein transport protein Sec61 subunit beta OS=Lactuca sativa OX=4236 GN=LSAT_4X44381 PE=3 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 4.2e-10
Identity = 38/42 (90.48%), Postives = 39/42 (92.86%), Query Frame = 0


Query: 36 MLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMALLQFI 78
          MLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVM  L F+
Sbjct: 41 MLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFV 82

[Close]

BLAST of MELO3C005959.2 vs. TrEMBL
Match: tr|A0A251S185|A0A251S185_HELAN (Uncharacterized protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr16g0519721 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 4.2e-10
Identity = 38/42 (90.48%), Postives = 39/42 (92.86%), Query Frame = 0


Query: 36  MLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMALLQFI 78
           MLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVM  L F+
Sbjct: 107 MLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFV 148

[Close]

BLAST of MELO3C005959.2 vs. TrEMBL
Match: tr|A0A251V4K1|A0A251V4K1_HELAN (Protein transport protein Sec61 subunit beta OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr04g0123411 PE=3 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 4.2e-10
Identity = 38/42 (90.48%), Postives = 39/42 (92.86%), Query Frame = 0


Query: 36  MLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMALLQFI 78
           MLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVM  L F+
Sbjct: 82  MLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFV 123

The following BLAST results are available for this feature:

BLAST of MELO3C005959.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011650635.1	6.3e-10	90.48	PREDICTED: protein transport protein Sec61 subunit beta [Cucumis sativus] >KGN56...	[more]
XP_006427859.1	6.3e-10	90.48	protein transport protein Sec61 subunit beta [Citrus clementina] >XP_006464569.1...	[more]
XP_008437786.1	6.3e-10	90.48	PREDICTED: protein transport protein Sec61 subunit beta [Cucumis melo]	[more]
XP_010544608.1	6.3e-10	90.48	PREDICTED: protein transport protein Sec61 subunit beta [Tarenaya hassleriana]	[more]
XP_010524405.1	6.3e-10	90.48	PREDICTED: protein transport protein Sec61 subunit beta [Tarenaya hassleriana] >...	[more]

BLAST of MELO3C005959.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G60540.1	1.5e-13	88.10	Preprotein translocase Sec, Sec61-beta subunit protein	[more]
AT2G45070.1	1.7e-12	87.50	Preprotein translocase Sec, Sec61-beta subunit protein	[more]
AT5G60460.1	2.5e-08	71.79	Preprotein translocase Sec, Sec61-beta subunit protein	[more]

BLAST of MELO3C005959.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P38389\|SC61B_ARATH	3.0e-11	87.50	Protein transport protein Sec61 subunit beta OS=Arabidopsis thaliana OX=3702 GN=...	[more]
sp\|A8I6P9\|SC61B_CHLRE	3.2e-05	58.97	Protein transport protein Sec61 subunit beta OS=Chlamydomonas reinhardtii OX=305...	[more]
sp\|Q54YR4\|SC61B_DICDI	2.1e-04	58.33	Protein transport protein Sec61 subunit beta OS=Dictyostelium discoideum OX=4468...	[more]
sp\|O43002\|SC61B_SCHPO	6.0e-04	54.05	Protein transport protein sec61 subunit beta OS=Schizosaccharomyces pombe (strai...	[more]
sp\|Q9HFC7\|SC61B_YARLI	7.9e-04	54.05	Protein transport protein Sec61 subunit beta OS=Yarrowia lipolytica (strain CLIB...	[more]

BLAST of MELO3C005959.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|V4UNS3\|V4UNS3_9ROSI	4.2e-10	90.48	Protein transport protein Sec61 subunit beta OS=Citrus clementina OX=85681 GN=CI...	[more]
tr\|A0A2J6LW80\|A0A2J6LW80_LACSA	4.2e-10	90.48	Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_7X10180 PE=4 SV=1	[more]
tr\|A0A2J6JK13\|A0A2J6JK13_LACSA	4.2e-10	90.48	Protein transport protein Sec61 subunit beta OS=Lactuca sativa OX=4236 GN=LSAT_4...	[more]
tr\|A0A251S185\|A0A251S185_HELAN	4.2e-10	90.48	Uncharacterized protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr16g0519721 PE...	[more]
tr\|A0A251V4K1\|A0A251V4K1_HELAN	4.2e-10	90.48	Protein transport protein Sec61 subunit beta OS=Helianthus annuus OX=4232 GN=Han...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005784	Sec61 translocon complex

Vocabulary: **Biological Process**
Term	Definition
GO:0006886	intracellular protein transport

Vocabulary: **INTERPRO**
Term	Definition
IPR016482	SecG/Sec61-beta/Sbh
IPR030671	Sec61-beta/Sbh

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005784	Sec61 translocon complex
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C005959.2.1	MELO3C005959.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR030671	Protein transport Sec61-beta/Sbh	PIRSF	PIRSF006398	Sec61_beta	coord: 2..80 e-value: 1.1E-25 score: 86.8
IPR030671	Protein transport Sec61-beta/Sbh	PANTHER	PTHR13509	SEC61BETA-PROV PROTEIN	coord: 4..77
IPR016482	Protein transport protein SecG/Sec61-beta/Sbh	PFAM	PF03911	Sec61_beta	coord: 33..72 e-value: 1.6E-18 score: 66.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..33
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..33
None	No IPR available	PANTHER	PTHR13509:SF2	PREPROTEIN TRANSLOCASE SEC, SEC61-BETA SUBUNIT PROTEIN-RELATED	coord: 4..77

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C005959.2	Csa3G117430	Cucumber (Chinese Long) v2	cumedB223
MELO3C005959.2	CSPI03G07280	Wild cucumber (PI 183967)	cpimedB224
MELO3C005959.2	Cucsa.259840	Cucumber (Gy14) v1	cgymedB432
MELO3C005959.2	CmaCh14G021540	Cucurbita maxima (Rimu)	cmamedB273
MELO3C005959.2	CmaCh06G009610	Cucurbita maxima (Rimu)	cmamedB863
MELO3C005959.2	CmoCh06G009830	Cucurbita moschata (Rifu)	cmomedB857
MELO3C005959.2	CmoCh14G022260	Cucurbita moschata (Rifu)	cmomedB260
MELO3C005959.2	Lsi05G022040	Bottle gourd (USVL1VR-Ls)	lsimedB396
MELO3C005959.2	Cp4.1LG08g00370	Cucurbita pepo (Zucchini)	cpemedB951
MELO3C005959.2	Cp4.1LG03g15720	Cucurbita pepo (Zucchini)	cpemedB693
MELO3C005959.2	CsGy3G007420	Cucumber (Gy14) v2	cgybmedB201
MELO3C005959.2	Cla021092	Watermelon (97103) v1	medwmB447
MELO3C005959.2	ClCG05G000250	Watermelon (Charleston Gray)	medwcgB416
MELO3C005959.2	Cla97C05G080230	Watermelon (97103) v2	medwmbB423
MELO3C005959.2	Bhi01G000433	Wax gourd	medwgoB542
MELO3C005959.2	Carg17680	Silver-seed gourd	carmedB0142
MELO3C005959.2	Carg24172	Silver-seed gourd	carmedB0101
MELO3C005959.2	CsaV3_3G007400	Cucumber (Chinese Long) v3	cucmedB230

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None