Cla97C05G080230 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C05G080230
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	Protein transport protein Sec61 subunit beta
Location	Cla97Chr05 : 376650 .. 377994 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATTATGAACCAGATCTAGATCTCCATTCCGATTCATTCTTCATACAATTAGGTAAATTAGGGTTTGCGATTTCCTACCTGCCTGTTGCGTCTCGGACTTTGGATGATCGTCAGATCTTGATTTCATATCATTATTATTATTATTATTATTATTATTTGCGAATTGATGTTTGAGTAAATTAGATTCTTTGCGCATCTTGAGAATGTTCGTTTCTTTACTTTTTCTCTTCGATAAGCTTTGAATTTTCTGCAAAGTTTTCTAGAACAAAATTCTCTCCTATTTTCCATTTGGATTTTCTGTTGCAAAGCAGATCTCCCTCTTGACTTAACAGAAGTTAGCATGCACATTTCTTCCTTCTTTTTCTTCCGTTTGGTGTTAATTTATGGTGGTTGTTATGATAAATTAGGACTTGTAGTTGTCTGTTCCCATGTGAATGAATATTGTATATTGGTTTCTGCAACTTATGGGTTGAGATAGGTTGCAATTTATGGACTCTGAACTTCTGTGGAGAGTTCATTTTTTCTTCAATTTGGACATTTCTGGTTTAAGGCTTTGCAGGTCTAGGATTTAAGACACTTTTTTCTTCCTGGCCATAAACGGTTAGATGAGCTTCTAATTTCATGCATTATTTGGTACATTGTAGACATGCTCTCCAATTTTCTTTTTGATCTGAATCAGTTCCGAATGAACCAGTATTTAATCTCAACTCATGCAGTATGACCTACTAATTTGTTTCACTAGTATTGCCTCGTTTTAAAAATGTTTGGTATGATACAAAAATCCAAACTCATGTCAGCGAAAATCTATACGGATGTTTGGAGTTCTGGCTAGATTTTTTTTATCTTTTTTTTTTCCCTCCCTCCAAGAACGATTGCGTGATAGGTTGTTTTGTTAGATAATGAGGTTTCGATAACTTGTGATTTGAGAAAAGTTAGGAAAAGGAAAGGAAAGGTTGCAGGTTAACATTCCTTCCTGCCTACAATGTTCTTATTTGATTCAGAAATGTTTTAACAAAGGATGTCTTCCGCGTTCTTCATTGCTGTCAATTGGTCAATGGAAGTTCCAACTTTACTTACTCTTTGTCAATACAGAATGGCACTAGGTGGAGCAAATCCCCAGAGAGGAAGTGCGGCAGCTACTGCCAGCATGCGTAGGAGAAGGACAACAAGTTCTGGTACATCTGGAGGGGCAGCTGGAACAATGCTGCAGTTCTACACGGATGATGCTCCTGGACTCAAGATATCCCCCAATGTTGTTCTCGTCATGAGCATTGGTTTCATTGCTTTTGTTGCCATTCTCCATGTTATGGGTAAGCTATACTTCGTGCGAAGAGAAGCCTAG

mRNA sequence

ATGAATTATGAACCAGATCTAGATCTCCATTCCGATTCATTCTTCATACAATTAGACATGCTCTCCAATTTTCTTTTTGATCTGAATCAGTTCCGAATGAACCAAATGGCACTAGGTGGAGCAAATCCCCAGAGAGGAAGTGCGGCAGCTACTGCCAGCATGCGTAGGAGAAGGACAACAAGTTCTGGTACATCTGGAGGGGCAGCTGGAACAATGCTGCAGTTCTACACGGATGATGCTCCTGGACTCAAGATATCCCCCAATGTTGTTCTCGTCATGAGCATTGGTTTCATTGCTTTTGTTGCCATTCTCCATGTTATGGGTAAGCTATACTTCGTGCGAAGAGAAGCCTAG

Coding sequence (CDS)

ATGAATTATGAACCAGATCTAGATCTCCATTCCGATTCATTCTTCATACAATTAGACATGCTCTCCAATTTTCTTTTTGATCTGAATCAGTTCCGAATGAACCAAATGGCACTAGGTGGAGCAAATCCCCAGAGAGGAAGTGCGGCAGCTACTGCCAGCATGCGTAGGAGAAGGACAACAAGTTCTGGTACATCTGGAGGGGCAGCTGGAACAATGCTGCAGTTCTACACGGATGATGCTCCTGGACTCAAGATATCCCCCAATGTTGTTCTCGTCATGAGCATTGGTTTCATTGCTTTTGTTGCCATTCTCCATGTTATGGGTAAGCTATACTTCGTGCGAAGAGAAGCCTAG

Protein sequence

MNYEPDLDLHSDSFFIQLDMLSNFLFDLNQFRMNQMALGGANPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA

Homology

[Close]

BLAST of Cla97C05G080230 vs. NCBI nr
Match: EOY04701.1 (Preprotein translocase Sec [Theobroma cacao])

HSP 1 Score: 91.7 bits (226), Expect = 1.8e-15
Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = 0


Query: 72  MLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA 118
           MLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA
Sbjct: 36  MLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA 81

[Close]

BLAST of Cla97C05G080230 vs. NCBI nr
Match: XP_014490350.1 (protein transport protein Sec61 subunit beta [Vigna radiata var. radiata] >XP_017441578.1 PREDICTED: protein transport protein Sec61 subunit beta-like [Vigna angularis] >BAT97620.1 hypothetical protein VIGAN_09112300 [Vigna angularis var. angularis])

HSP 1 Score: 91.7 bits (226), Expect = 1.8e-15
Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = 0


Query: 72  MLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA 118
           MLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA
Sbjct: 37  MLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA 82

[Close]

BLAST of Cla97C05G080230 vs. NCBI nr
Match: XP_021907537.1 (protein transport protein Sec61 subunit beta-like [Carica papaya])

HSP 1 Score: 91.7 bits (226), Expect = 1.8e-15
Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = 0


Query: 72  MLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA 118
           MLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA
Sbjct: 37  MLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA 82

[Close]

BLAST of Cla97C05G080230 vs. NCBI nr
Match: XP_022146520.1 (protein transport protein Sec61 subunit beta-like [Momordica charantia] >XP_022924769.1 protein transport protein Sec61 subunit beta-like [Cucurbita moschata] >XP_022924770.1 protein transport protein Sec61 subunit beta-like [Cucurbita moschata] >XP_022980768.1 protein transport protein Sec61 subunit beta-like [Cucurbita maxima] >XP_023526368.1 protein transport protein Sec61 subunit beta-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 91.7 bits (226), Expect = 1.8e-15
Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = 0


Query: 72  MLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA 118
           MLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA
Sbjct: 37  MLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA 82

[Close]

BLAST of Cla97C05G080230 vs. NCBI nr
Match: XP_022895738.1 (protein transport protein Sec61 subunit beta-like [Olea europaea var. sylvestris])

HSP 1 Score: 91.7 bits (226), Expect = 1.8e-15
Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = 0


Query: 72  MLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA 118
           MLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA
Sbjct: 37  MLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA 82

[Close]

BLAST of Cla97C05G080230 vs. TrEMBL
Match: tr|A0A1S3T9A3|A0A1S3T9A3_VIGRR (Protein transport protein Sec61 subunit beta OS=Vigna radiata var. radiata OX=3916 GN=LOC106753079 PE=3 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.2e-15
Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = 0


Query: 72  MLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA 118
           MLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA
Sbjct: 37  MLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA 82

[Close]

BLAST of Cla97C05G080230 vs. TrEMBL
Match: tr|A0A061EIP2|A0A061EIP2_THECC (Protein transport protein Sec61 subunit beta OS=Theobroma cacao OX=3641 GN=TCM_019890 PE=3 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.2e-15
Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = 0


Query: 72  MLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA 118
           MLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA
Sbjct: 36  MLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA 81

[Close]

BLAST of Cla97C05G080230 vs. TrEMBL
Match: tr|A0A2R6R993|A0A2R6R993_ACTCH (Protein transport protein Sec61 subunit beta OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc09007 PE=3 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.2e-15
Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = 0


Query: 72  MLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA 118
           MLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA
Sbjct: 55  MLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA 100

[Close]

BLAST of Cla97C05G080230 vs. TrEMBL
Match: tr|A0A2R6S0Z3|A0A2R6S0Z3_ACTCH (Protein transport protein Sec61 subunit beta OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc00458 PE=3 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.2e-15
Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = 0


Query: 72  MLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA 118
           MLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA
Sbjct: 39  MLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA 84

[Close]

BLAST of Cla97C05G080230 vs. TrEMBL
Match: tr|A0A0S3SXL4|A0A0S3SXL4_PHAAN (Protein transport protein Sec61 subunit beta OS=Vigna angularis var. angularis OX=157739 GN=Vigan.09G112300 PE=3 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.2e-15
Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = 0


Query: 72  MLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA 118
           MLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA
Sbjct: 37  MLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA 82

[Close]

BLAST of Cla97C05G080230 vs. Swiss-Prot
Match: sp|P38389|SC61B_ARATH (Protein transport protein Sec61 subunit beta OS=Arabidopsis thaliana OX=3702 GN=At2g45070 PE=1 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 1.4e-14
Identity = 38/41 (92.68%), Postives = 41/41 (100.00%), Query Frame = 0


Query: 74  QFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVR 115
           QFYTDDAPGLKISPNVVL+MSIGFIAFVA+LHVMGKLYFV+
Sbjct: 42  QFYTDDAPGLKISPNVVLIMSIGFIAFVAVLHVMGKLYFVK 82

[Close]

BLAST of Cla97C05G080230 vs. Swiss-Prot
Match: sp|A8I6P9|SC61B_CHLRE (Protein transport protein Sec61 subunit beta OS=Chlamydomonas reinhardtii OX=3055 GN=SEC61B PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 6.2e-07
Identity = 25/37 (67.57%), Postives = 30/37 (81.08%), Query Frame = 0


Query: 73  LQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGK 110
           + FYTDD PG K+SP VV+ MS+ FIAFV ILHV+GK
Sbjct: 51  MNFYTDDTPGWKMSPVVVITMSLSFIAFVTILHVVGK 87

[Close]

BLAST of Cla97C05G080230 vs. Swiss-Prot
Match: sp|Q54YR4|SC61B_DICDI (Protein transport protein Sec61 subunit beta OS=Dictyostelium discoideum OX=44689 GN=sec61b PE=3 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 3.1e-06
Identity = 24/38 (63.16%), Postives = 31/38 (81.58%), Query Frame = 0


Query: 72  MLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGK 110
           M++FY++DA GLK+ P  VL MS+ FIAFV ILH+MGK
Sbjct: 20  MMKFYSEDAIGLKVGPTAVLFMSLIFIAFVIILHIMGK 57

[Close]

BLAST of Cla97C05G080230 vs. Swiss-Prot
Match: sp|P60467|SC61B_CANLF (Protein transport protein Sec61 subunit beta OS=Canis lupus familiaris OX=9615 GN=SEC61B PE=1 SV=2)

HSP 1 Score: 48.5 bits (114), Expect = 5.8e-05
Identity = 23/38 (60.53%), Postives = 30/38 (78.95%), Query Frame = 0


Query: 72  MLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGK 110
           M +FYT+D+PGLK+ P  VLVMS+ FIA V +LH+ GK
Sbjct: 55  MWRFYTEDSPGLKVGPVPVLVMSLLFIASVFMLHIWGK 92

[Close]

BLAST of Cla97C05G080230 vs. Swiss-Prot
Match: sp|P60468|SC61B_HUMAN (Protein transport protein Sec61 subunit beta OS=Homo sapiens OX=9606 GN=SEC61B PE=1 SV=2)

HSP 1 Score: 48.5 bits (114), Expect = 5.8e-05
Identity = 23/38 (60.53%), Postives = 30/38 (78.95%), Query Frame = 0


Query: 72  MLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGK 110
           M +FYT+D+PGLK+ P  VLVMS+ FIA V +LH+ GK
Sbjct: 55  MWRFYTEDSPGLKVGPVPVLVMSLLFIASVFMLHIWGK 92

[Close]

BLAST of Cla97C05G080230 vs. TAIR10
Match: AT3G60540.1 (Preprotein translocase Sec, Sec61-beta subunit protein)

HSP 1 Score: 83.6 bits (205), Expect = 9.0e-17
Identity = 40/43 (93.02%), Postives = 43/43 (100.00%), Query Frame = 0


Query: 72  MLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVR 115
           MLQFYTDDAPGLKISPNVVL+MSIGFIAFVA+LHVMGKLYFV+
Sbjct: 37  MLQFYTDDAPGLKISPNVVLIMSIGFIAFVAVLHVMGKLYFVK 79

[Close]

BLAST of Cla97C05G080230 vs. TAIR10
Match: AT2G45070.1 (Preprotein translocase Sec, Sec61-beta subunit protein)

HSP 1 Score: 80.5 bits (197), Expect = 7.6e-16
Identity = 38/41 (92.68%), Postives = 41/41 (100.00%), Query Frame = 0


Query: 74  QFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVR 115
           QFYTDDAPGLKISPNVVL+MSIGFIAFVA+LHVMGKLYFV+
Sbjct: 42  QFYTDDAPGLKISPNVVLIMSIGFIAFVAVLHVMGKLYFVK 82

[Close]

BLAST of Cla97C05G080230 vs. TAIR10
Match: AT5G60460.1 (Preprotein translocase Sec, Sec61-beta subunit protein)

HSP 1 Score: 64.7 bits (156), Expect = 4.3e-11
Identity = 31/40 (77.50%), Postives = 34/40 (85.00%), Query Frame = 0


Query: 72  MLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLY 112
           ML+FYTDDAPGLKISP VVL+MS+ FI FV  LHV GKLY
Sbjct: 62  MLRFYTDDAPGLKISPTVVLIMSLCFIGFVTALHVFGKLY 101

The following BLAST results are available for this feature:

BLAST of Cla97C05G080230 vs. NCBI nr


Match Name	E-value	Identity	Description
EOY04701.1	1.8e-15	100.00	Preprotein translocase Sec [Theobroma cacao]	[more]
XP_014490350.1	1.8e-15	100.00	protein transport protein Sec61 subunit beta [Vigna radiata var. radiata] >XP_01...	[more]
XP_021907537.1	1.8e-15	100.00	protein transport protein Sec61 subunit beta-like [Carica papaya]	[more]
XP_022146520.1	1.8e-15	100.00	protein transport protein Sec61 subunit beta-like [Momordica charantia] >XP_0229...	[more]
XP_022895738.1	1.8e-15	100.00	protein transport protein Sec61 subunit beta-like [Olea europaea var. sylvestris...	[more]

BLAST of Cla97C05G080230 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3T9A3\|A0A1S3T9A3_VIGRR	1.2e-15	100.00	Protein transport protein Sec61 subunit beta OS=Vigna radiata var. radiata OX=39...	[more]
tr\|A0A061EIP2\|A0A061EIP2_THECC	1.2e-15	100.00	Protein transport protein Sec61 subunit beta OS=Theobroma cacao OX=3641 GN=TCM_0...	[more]
tr\|A0A2R6R993\|A0A2R6R993_ACTCH	1.2e-15	100.00	Protein transport protein Sec61 subunit beta OS=Actinidia chinensis var. chinens...	[more]
tr\|A0A2R6S0Z3\|A0A2R6S0Z3_ACTCH	1.2e-15	100.00	Protein transport protein Sec61 subunit beta OS=Actinidia chinensis var. chinens...	[more]
tr\|A0A0S3SXL4\|A0A0S3SXL4_PHAAN	1.2e-15	100.00	Protein transport protein Sec61 subunit beta OS=Vigna angularis var. angularis O...	[more]

BLAST of Cla97C05G080230 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P38389\|SC61B_ARATH	1.4e-14	92.68	Protein transport protein Sec61 subunit beta OS=Arabidopsis thaliana OX=3702 GN=...	[more]
sp\|A8I6P9\|SC61B_CHLRE	6.2e-07	67.57	Protein transport protein Sec61 subunit beta OS=Chlamydomonas reinhardtii OX=305...	[more]
sp\|Q54YR4\|SC61B_DICDI	3.1e-06	63.16	Protein transport protein Sec61 subunit beta OS=Dictyostelium discoideum OX=4468...	[more]
sp\|P60467\|SC61B_CANLF	5.8e-05	60.53	Protein transport protein Sec61 subunit beta OS=Canis lupus familiaris OX=9615 G...	[more]
sp\|P60468\|SC61B_HUMAN	5.8e-05	60.53	Protein transport protein Sec61 subunit beta OS=Homo sapiens OX=9606 GN=SEC61B P...	[more]

BLAST of Cla97C05G080230 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G60540.1	9.0e-17	93.02	Preprotein translocase Sec, Sec61-beta subunit protein	[more]
AT2G45070.1	7.6e-16	92.68	Preprotein translocase Sec, Sec61-beta subunit protein	[more]
AT5G60460.1	4.3e-11	77.50	Preprotein translocase Sec, Sec61-beta subunit protein	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006886	intracellular protein transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0005784	Sec61 translocon complex

Vocabulary: **INTERPRO**
Term	Definition
IPR030671	Sec61-beta/Sbh
IPR016482	SecG/Sec61-beta/Sbh

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0015031	protein transport
biological_process	GO:0031204	posttranslational protein targeting to membrane, translocation
biological_process	GO:0006616	SRP-dependent cotranslational protein targeting to membrane, translocation
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
cellular_component	GO:0005784	Sec61 translocon complex
cellular_component	GO:0031205	endoplasmic reticulum Sec complex
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005086	ARF guanyl-nucleotide exchange factor activity
molecular_function	GO:0015450	P-P-bond-hydrolysis-driven protein transmembrane transporter activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C05G080230.1	Cla97C05G080230.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016482	Protein transport protein SecG/Sec61-beta/Sbh	PFAM	PF03911	Sec61_beta	coord: 69..108 e-value: 3.3E-18 score: 65.3
IPR030671	Protein transport Sec61-beta/Sbh	PIRSF	PIRSF006398	Sec61_beta	coord: 34..115 e-value: 3.1E-26 score: 89.0
IPR030671	Protein transport Sec61-beta/Sbh	PANTHER	PTHR13509	SEC61BETA-PROV PROTEIN	coord: 22..117
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 41..66
None	No IPR available	PANTHER	PTHR13509:SF2	PREPROTEIN TRANSLOCASE SEC, SEC61-BETA SUBUNIT PROTEIN-RELATED	coord: 22..117

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C05G080230	Cla021092	Watermelon (97103) v1	wmwmbB206
Cla97C05G080230	Csa3G117430	Cucumber (Chinese Long) v2	cuwmbB204
Cla97C05G080230	ClCG05G000250	Watermelon (Charleston Gray)	wcgwmbB229
Cla97C05G080230	CSPI03G07280	Wild cucumber (PI 183967)	cpiwmbB209
Cla97C05G080230	Cucsa.259840	Cucumber (Gy14) v1	cgywmbB452
Cla97C05G080230	CmaCh14G021540	Cucurbita maxima (Rimu)	cmawmbB263
Cla97C05G080230	CmaCh06G009610	Cucurbita maxima (Rimu)	cmawmbB857
Cla97C05G080230	CmoCh14G022260	Cucurbita moschata (Rifu)	cmowmbB243
Cla97C05G080230	CmoCh06G009830	Cucurbita moschata (Rifu)	cmowmbB833
Cla97C05G080230	Lsi05G022040	Bottle gourd (USVL1VR-Ls)	lsiwmbB333
Cla97C05G080230	CsGy3G007420	Cucumber (Gy14) v2	cgybwmbB196
Cla97C05G080230	MELO3C005959.2	Melon (DHL92) v3.6.1	medwmbB423
Cla97C05G080230	Carg24172	Silver-seed gourd	carwmbB0098
Cla97C05G080230	Carg17680	Silver-seed gourd	carwmbB0138
Cla97C05G080230	CsaV3_3G007400	Cucumber (Chinese Long) v3	cucwmbB206
Cla97C05G080230	Bhi01G000433	Wax gourd	wgowmbB191

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C05G080230	Cucurbita maxima (Rimu)	cmawmbB007
Cla97C05G080230	Melon (DHL92) v3.5.1	mewmbB434