CmoCh06G009830 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh06G009830
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Protein transport protein Sec61 subunit beta
Location	Cmo_Chr06 : 7745713 .. 7745961 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCACTAGGTGGAGGAGCTCCCCAGAGAGGAAGTGCGGCAGCTACTGCCAGCATGCGCAGGAGAAGGACGACAAGTTCAGGTACATCTGGAGGGGCAGCTGGAACAATGCTGCAATTTTACACGGATGATGCTCCTGGCCTCAAGATCTCCCCCAACGTTGTACTCGTCATGAGCATTGGTTTCATTGCGTTTGTTGCCATTCTCCATGTTATGGGAAAGCTGTACTTCGTGCGAAGAGAAGCCTAG

mRNA sequence

ATGGCACTAGGTGGAGGAGCTCCCCAGAGAGGAAGTGCGGCAGCTACTGCCAGCATGCGCAGGAGAAGGACGACAAGTTCAGGTACATCTGGAGGGGCAGCTGGAACAATGCTGCAATTTTACACGGATGATGCTCCTGGCCTCAAGATCTCCCCCAACGTTGTACTCGTCATGAGCATTGGTTTCATTGCGTTTGTTGCCATTCTCCATGTTATGGGAAAGCTGTACTTCGTGCGAAGAGAAGCCTAG

Coding sequence (CDS)

ATGGCACTAGGTGGAGGAGCTCCCCAGAGAGGAAGTGCGGCAGCTACTGCCAGCATGCGCAGGAGAAGGACGACAAGTTCAGGTACATCTGGAGGGGCAGCTGGAACAATGCTGCAATTTTACACGGATGATGCTCCTGGCCTCAAGATCTCCCCCAACGTTGTACTCGTCATGAGCATTGGTTTCATTGCGTTTGTTGCCATTCTCCATGTTATGGGAAAGCTGTACTTCGTGCGAAGAGAAGCCTAG

Homology

[Close]

BLAST of CmoCh06G009830 vs. Swiss-Prot
Match: SC61B_ARATH (Protein transport protein Sec61 subunit beta OS=Arabidopsis thaliana GN=At2g45070 PE=1 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 2.2e-27
Identity = 67/81 (82.72%), Postives = 73/81 (90.12%), Query Frame = 1


Query: 3  LGGGAPQRGSAAATASMRRRRTTSS----GTSGGAAGTMLQFYTDDAPGLKISPNVVLVM 62
          +G GAPQRGSAAATASMRRR+ TS     G SGGAAG+MLQFYTDDAPGLKISPNVVL+M
Sbjct: 2  VGSGAPQRGSAAATASMRRRKPTSGAGGGGASGGAAGSMLQFYTDDAPGLKISPNVVLIM 61

Query: 63 SIGFIAFVAILHVMGKLYFVR 80
          SIGFIAFVA+LHVMGKLYFV+
Sbjct: 62 SIGFIAFVAVLHVMGKLYFVK 82

[Close]

BLAST of CmoCh06G009830 vs. Swiss-Prot
Match: SC61B_YARLI (Protein transport protein Sec61 subunit beta OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=SBH1 PE=3 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 9.5e-07
Identity = 30/61 (49.18%), Postives = 43/61 (70.49%), Query Frame = 1


Query: 15 ATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGK 74
          A AS R   T S G +GG++ TML+ YTD++ GLK+ P VV+V+S+GFI  V  LH++ K
Sbjct: 26 AKASQRPTSTRSVG-AGGSSSTMLKLYTDESQGLKVDPVVVMVLSLGFIFSVVALHILAK 85

Query: 75 L 76
          +
Sbjct: 86 V 85

[Close]

BLAST of CmoCh06G009830 vs. Swiss-Prot
Match: SC61B_DICDI (Protein transport protein Sec61 subunit beta OS=Dictyostelium discoideum GN=sec61b PE=3 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 6.2e-06
Identity = 27/53 (50.94%), Postives = 38/53 (71.70%), Query Frame = 1


Query: 22 RRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGK 75
          +R  ++   GG   +M++FY++DA GLK+ P  VL MS+ FIAFV ILH+MGK
Sbjct: 7  QRAPATVNKGG--NSMMKFYSEDAIGLKVGPTAVLFMSLIFIAFVIILHIMGK 57

[Close]

BLAST of CmoCh06G009830 vs. Swiss-Prot
Match: SC61B_CANLF (Protein transport protein Sec61 subunit beta OS=Canis lupus familiaris GN=SEC61B PE=1 SV=2)

HSP 1 Score: 51.2 bits (121), Expect = 6.2e-06
Identity = 34/78 (43.59%), Postives = 48/78 (61.54%), Query Frame = 1


Query: 5  GGAPQRGSAAATA--SMRRRRTTSSGT------SGGAAGTMLQFYTDDAPGLKISPNVVL 64
          G +P +  AA  A  ++R+R+  S GT      +    G M +FYT+D+PGLK+ P  VL
Sbjct: 15 GRSPSKAVAARAAGSTVRQRKNASCGTRSAGRTTSAGTGGMWRFYTEDSPGLKVGPVPVL 74

Query: 65 VMSIGFIAFVAILHVMGK 75
          VMS+ FIA V +LH+ GK
Sbjct: 75 VMSLLFIASVFMLHIWGK 92

[Close]

BLAST of CmoCh06G009830 vs. Swiss-Prot
Match: SC61B_HUMAN (Protein transport protein Sec61 subunit beta OS=Homo sapiens GN=SEC61B PE=1 SV=2)

HSP 1 Score: 51.2 bits (121), Expect = 6.2e-06
Identity = 34/78 (43.59%), Postives = 48/78 (61.54%), Query Frame = 1


Query: 5  GGAPQRGSAAATA--SMRRRRTTSSGT------SGGAAGTMLQFYTDDAPGLKISPNVVL 64
          G +P +  AA  A  ++R+R+  S GT      +    G M +FYT+D+PGLK+ P  VL
Sbjct: 15 GRSPSKAVAARAAGSTVRQRKNASCGTRSAGRTTSAGTGGMWRFYTEDSPGLKVGPVPVL 74

Query: 65 VMSIGFIAFVAILHVMGK 75
          VMS+ FIA V +LH+ GK
Sbjct: 75 VMSLLFIASVFMLHIWGK 92

[Close]

BLAST of CmoCh06G009830 vs. TrEMBL
Match: A0A0A0L6Y8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G117430 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 1.9e-33
Identity = 80/82 (97.56%), Postives = 81/82 (98.78%), Query Frame = 1


Query: 1  MALGGGAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI 60
          MALGGG PQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI
Sbjct: 1  MALGGGGPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI 60

Query: 61 GFIAFVAILHVMGKLYFVRREA 83
          GFIAFVA+LHVMGKLYFVRREA
Sbjct: 61 GFIAFVAVLHVMGKLYFVRREA 82

[Close]

BLAST of CmoCh06G009830 vs. TrEMBL
Match: I3T8K1_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 1.3e-31
Identity = 77/82 (93.90%), Postives = 78/82 (95.12%), Query Frame = 1


Query: 1  MALGGGAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI 60
          MALGG APQRGSAAA ASMRRRRTTS G SGGAAGTMLQFYTDDAPGLKISPNVVLVMSI
Sbjct: 1  MALGGAAPQRGSAAAAASMRRRRTTSGGASGGAAGTMLQFYTDDAPGLKISPNVVLVMSI 60

Query: 61 GFIAFVAILHVMGKLYFVRREA 83
          GFIAFVA+LHVMGKLYFVRREA
Sbjct: 61 GFIAFVAVLHVMGKLYFVRREA 82

[Close]

BLAST of CmoCh06G009830 vs. TrEMBL
Match: W9QQ35_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_021777 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 3.9e-31
Identity = 76/82 (92.68%), Postives = 78/82 (95.12%), Query Frame = 1


Query: 1   MALGGGAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI 60
           M LGG AP RGSAAATASMRRRRTTSSG SGGAAGTMLQFYTDDAPGLKISPNVVL+MSI
Sbjct: 511 MVLGGAAPPRGSAAATASMRRRRTTSSGASGGAAGTMLQFYTDDAPGLKISPNVVLIMSI 570

Query: 61  GFIAFVAILHVMGKLYFVRREA 83
           GFIAFVAILHVMGKLYFVRRE+
Sbjct: 571 GFIAFVAILHVMGKLYFVRRES 592

[Close]

BLAST of CmoCh06G009830 vs. TrEMBL
Match: A0A151R1A8_CAJCA (Protein transport protein Sec61 subunit beta OS=Cajanus cajan GN=KK1_042494 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 8.6e-31
Identity = 78/83 (93.98%), Postives = 79/83 (95.18%), Query Frame = 1


Query: 1  MALGGG-APQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMS 60
          MALGGG APQRGSAAATASMRRRRTT  G SGGAAGTMLQFYTDDAPGLKISPNVVLVMS
Sbjct: 1  MALGGGTAPQRGSAAATASMRRRRTTGGGASGGAAGTMLQFYTDDAPGLKISPNVVLVMS 60

Query: 61 IGFIAFVAILHVMGKLYFVRREA 83
          IGFIAFVAILHVMGKLYFVR+EA
Sbjct: 61 IGFIAFVAILHVMGKLYFVRKEA 83

[Close]

BLAST of CmoCh06G009830 vs. TrEMBL
Match: V7AKD3_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_011G169200g PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 1.9e-30
Identity = 75/82 (91.46%), Postives = 77/82 (93.90%), Query Frame = 1


Query: 1  MALGGGAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI 60
          MALGG AP RGSAAATA+MRRRRTT  G SGGAAGTMLQFYTDDAPGLKISPNVVLVMSI
Sbjct: 1  MALGGTAPPRGSAAATANMRRRRTTGGGASGGAAGTMLQFYTDDAPGLKISPNVVLVMSI 60

Query: 61 GFIAFVAILHVMGKLYFVRREA 83
          GFIAFVA+LHVMGKLYFVRREA
Sbjct: 61 GFIAFVAVLHVMGKLYFVRREA 82

[Close]

BLAST of CmoCh06G009830 vs. TAIR10
Match: AT2G45070.1 (AT2G45070.1 Preprotein translocase Sec, Sec61-beta subunit protein)

HSP 1 Score: 122.5 bits (306), Expect = 1.2e-28
Identity = 67/81 (82.72%), Postives = 73/81 (90.12%), Query Frame = 1


Query: 3  LGGGAPQRGSAAATASMRRRRTTSS----GTSGGAAGTMLQFYTDDAPGLKISPNVVLVM 62
          +G GAPQRGSAAATASMRRR+ TS     G SGGAAG+MLQFYTDDAPGLKISPNVVL+M
Sbjct: 2  VGSGAPQRGSAAATASMRRRKPTSGAGGGGASGGAAGSMLQFYTDDAPGLKISPNVVLIM 61

Query: 63 SIGFIAFVAILHVMGKLYFVR 80
          SIGFIAFVA+LHVMGKLYFV+
Sbjct: 62 SIGFIAFVAVLHVMGKLYFVK 82

[Close]

BLAST of CmoCh06G009830 vs. TAIR10
Match: AT3G60540.1 (AT3G60540.1 Preprotein translocase Sec, Sec61-beta subunit protein)

HSP 1 Score: 120.9 bits (302), Expect = 3.6e-28
Identity = 65/78 (83.33%), Postives = 72/78 (92.31%), Query Frame = 1


Query: 3  LGGGAPQRGSAAATASMRRRRTTS-SGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIG 62
          +GGGAPQRGSAAATASMRRR+    S ++GG AGTMLQFYTDDAPGLKISPNVVL+MSIG
Sbjct: 2  VGGGAPQRGSAAATASMRRRKPAGGSSSAGGGAGTMLQFYTDDAPGLKISPNVVLIMSIG 61

Query: 63 FIAFVAILHVMGKLYFVR 80
          FIAFVA+LHVMGKLYFV+
Sbjct: 62 FIAFVAVLHVMGKLYFVK 79

[Close]

BLAST of CmoCh06G009830 vs. TAIR10
Match: AT5G60460.1 (AT5G60460.1 Preprotein translocase Sec, Sec61-beta subunit protein)

HSP 1 Score: 80.9 bits (198), Expect = 4.1e-16
Identity = 51/80 (63.75%), Postives = 56/80 (70.00%), Query Frame = 1


Query: 5   GGAPQRGSAAATASMRRRRTTSSG--TSGGAAGT------MLQFYTDDAPGLKISPNVVL 64
           G A  RGSAAATA MRRRR    G  +SGG +G       ML+FYTDDAPGLKISP VVL
Sbjct: 22  GLAAPRGSAAATAGMRRRRLGGGGGVSSGGGSGVGSGSSNMLRFYTDDAPGLKISPTVVL 81

Query: 65  VMSIGFIAFVAILHVMGKLY 77
           +MS+ FI FV  LHV GKLY
Sbjct: 82  IMSLCFIGFVTALHVFGKLY 101

[Close]

BLAST of CmoCh06G009830 vs. NCBI nr
Match: gi|778676662|ref|XP_011650635.1| (PREDICTED: protein transport protein Sec61 subunit beta [Cucumis sativus])

HSP 1 Score: 149.4 bits (376), Expect = 2.7e-33
Identity = 80/82 (97.56%), Postives = 81/82 (98.78%), Query Frame = 1


Query: 1  MALGGGAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI 60
          MALGGG PQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI
Sbjct: 1  MALGGGGPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI 60

Query: 61 GFIAFVAILHVMGKLYFVRREA 83
          GFIAFVA+LHVMGKLYFVRREA
Sbjct: 61 GFIAFVAVLHVMGKLYFVRREA 82

[Close]

BLAST of CmoCh06G009830 vs. NCBI nr
Match: gi|659074770|ref|XP_008437786.1| (PREDICTED: protein transport protein Sec61 subunit beta [Cucumis melo])

HSP 1 Score: 145.2 bits (365), Expect = 5.0e-32
Identity = 80/82 (97.56%), Postives = 81/82 (98.78%), Query Frame = 1


Query: 1  MALGGGAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI 60
          MALGGG PQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI
Sbjct: 1  MALGGG-PQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI 60

Query: 61 GFIAFVAILHVMGKLYFVRREA 83
          GFIAFVA+LHVMGKLYFVRREA
Sbjct: 61 GFIAFVAVLHVMGKLYFVRREA 81

[Close]

BLAST of CmoCh06G009830 vs. NCBI nr
Match: gi|388521563|gb|AFK48843.1| (unknown [Lotus japonicus])

HSP 1 Score: 143.3 bits (360), Expect = 1.9e-31
Identity = 77/82 (93.90%), Postives = 78/82 (95.12%), Query Frame = 1


Query: 1  MALGGGAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI 60
          MALGG APQRGSAAA ASMRRRRTTS G SGGAAGTMLQFYTDDAPGLKISPNVVLVMSI
Sbjct: 1  MALGGAAPQRGSAAAAASMRRRRTTSGGASGGAAGTMLQFYTDDAPGLKISPNVVLVMSI 60

Query: 61 GFIAFVAILHVMGKLYFVRREA 83
          GFIAFVA+LHVMGKLYFVRREA
Sbjct: 61 GFIAFVAVLHVMGKLYFVRREA 82

[Close]

BLAST of CmoCh06G009830 vs. NCBI nr
Match: gi|703072297|ref|XP_010089248.1| (hypothetical protein L484_021777 [Morus notabilis])

HSP 1 Score: 141.7 bits (356), Expect = 5.5e-31
Identity = 76/82 (92.68%), Postives = 78/82 (95.12%), Query Frame = 1


Query: 1   MALGGGAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI 60
           M LGG AP RGSAAATASMRRRRTTSSG SGGAAGTMLQFYTDDAPGLKISPNVVL+MSI
Sbjct: 511 MVLGGAAPPRGSAAATASMRRRRTTSSGASGGAAGTMLQFYTDDAPGLKISPNVVLIMSI 570

Query: 61  GFIAFVAILHVMGKLYFVRREA 83
           GFIAFVAILHVMGKLYFVRRE+
Sbjct: 571 GFIAFVAILHVMGKLYFVRRES 592

[Close]

BLAST of CmoCh06G009830 vs. NCBI nr
Match: gi|502085814|ref|XP_004488016.1| (PREDICTED: protein transport protein Sec61 subunit beta-like [Cicer arietinum])

HSP 1 Score: 141.7 bits (356), Expect = 5.5e-31
Identity = 76/82 (92.68%), Postives = 77/82 (93.90%), Query Frame = 1


Query: 1  MALGGGAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI 60
          MALGGG PQRGSAAATASMRRR+T   G SGGAAGTMLQFYTDDAPGLKISPNVVLVMSI
Sbjct: 1  MALGGGGPQRGSAAATASMRRRKTAGGGASGGAAGTMLQFYTDDAPGLKISPNVVLVMSI 60

Query: 61 GFIAFVAILHVMGKLYFVRREA 83
          GFIAFVAILHVMGKLYFVRREA
Sbjct: 61 GFIAFVAILHVMGKLYFVRREA 82

The following BLAST results are available for this feature:

BLAST of CmoCh06G009830 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SC61B_ARATH	2.2e-27	82.72	Protein transport protein Sec61 subunit beta OS=Arabidopsis thaliana GN=At2g4507...	[more]
SC61B_YARLI	9.5e-07	49.18	Protein transport protein Sec61 subunit beta OS=Yarrowia lipolytica (strain CLIB...	[more]
SC61B_DICDI	6.2e-06	50.94	Protein transport protein Sec61 subunit beta OS=Dictyostelium discoideum GN=sec6...	[more]
SC61B_CANLF	6.2e-06	43.59	Protein transport protein Sec61 subunit beta OS=Canis lupus familiaris GN=SEC61B...	[more]
SC61B_HUMAN	6.2e-06	43.59	Protein transport protein Sec61 subunit beta OS=Homo sapiens GN=SEC61B PE=1 SV=2	[more]

BLAST of CmoCh06G009830 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L6Y8_CUCSA	1.9e-33	97.56	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G117430 PE=4 SV=1	[more]
I3T8K1_LOTJA	1.3e-31	93.90	Uncharacterized protein OS=Lotus japonicus PE=2 SV=1	[more]
W9QQ35_9ROSA	3.9e-31	92.68	Uncharacterized protein OS=Morus notabilis GN=L484_021777 PE=4 SV=1	[more]
A0A151R1A8_CAJCA	8.6e-31	93.98	Protein transport protein Sec61 subunit beta OS=Cajanus cajan GN=KK1_042494 PE=4...	[more]
V7AKD3_PHAVU	1.9e-30	91.46	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_011G169200g PE=4 SV=1	[more]

BLAST of CmoCh06G009830 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G45070.1	1.2e-28	82.72	Preprotein translocase Sec, Sec61-beta subunit protein	[more]
AT3G60540.1	3.6e-28	83.33	Preprotein translocase Sec, Sec61-beta subunit protein	[more]
AT5G60460.1	4.1e-16	63.75	Preprotein translocase Sec, Sec61-beta subunit protein	[more]

BLAST of CmoCh06G009830 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778676662\|ref\|XP_011650635.1\|	2.7e-33	97.56	PREDICTED: protein transport protein Sec61 subunit beta [Cucumis sativus]	[more]
gi\|659074770\|ref\|XP_008437786.1\|	5.0e-32	97.56	PREDICTED: protein transport protein Sec61 subunit beta [Cucumis melo]	[more]
gi\|388521563\|gb\|AFK48843.1\|	1.9e-31	93.90	unknown [Lotus japonicus]	[more]
gi\|703072297\|ref\|XP_010089248.1\|	5.5e-31	92.68	hypothetical protein L484_021777 [Morus notabilis]	[more]
gi\|502085814\|ref\|XP_004488016.1\|	5.5e-31	92.68	PREDICTED: protein transport protein Sec61 subunit beta-like [Cicer arietinum]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR016482	SecG/Sec61-beta/Sbh

Vocabulary: **Cellular Component**
Term	Definition
GO:0005784	Sec61 translocon complex

Vocabulary: **Biological Process**
Term	Definition
GO:0006886	intracellular protein transport

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
cellular_component	GO:0005784	Sec61 translocon complex
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh06G009830.1	CmoCh06G009830.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016482	Protein transport protein SecG/Sec61-beta/Sbh	PFAM	PF03911	Sec61_beta	coord: 34..73 score: 1.7
None	No IPR available	PANTHER	PTHR13509:SF2	PREPROTEIN TRANSLOCASE SEC, SEC61-BETA SUBUNIT PROTEIN-RELATED	coord: 1..81 score: 4.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh06G009830	Cucsa.259840	Cucumber (Gy14) v1	cgycmoB0718
CmoCh06G009830	CmaCh14G021540	Cucurbita maxima (Rimu)	cmacmoB271
CmoCh06G009830	CmaCh06G009610	Cucurbita maxima (Rimu)	cmacmoB829
CmoCh06G009830	Cla021092	Watermelon (97103) v1	cmowmB793
CmoCh06G009830	Csa3G117430	Cucumber (Chinese Long) v2	cmocuB806
CmoCh06G009830	ClCG05G000250	Watermelon (Charleston Gray)	cmowcgB743
CmoCh06G009830	CSPI03G07280	Wild cucumber (PI 183967)	cmocpiB814
CmoCh06G009830	Lsi05G022040	Bottle gourd (USVL1VR-Ls)	cmolsiB758
CmoCh06G009830	Cp4.1LG03g15720	Cucurbita pepo (Zucchini)	cmocpeB787
CmoCh06G009830	Cp4.1LG08g00370	Cucurbita pepo (Zucchini)	cmocpeB796
CmoCh06G009830	MELO3C005959.2	Melon (DHL92) v3.6.1	cmomedB857
CmoCh06G009830	CsaV3_3G007400	Cucumber (Chinese Long) v3	cmocucB0953
CmoCh06G009830	Cla97C05G080230	Watermelon (97103) v2	cmowmbB833
CmoCh06G009830	Bhi01G000433	Wax gourd	cmowgoB1013
CmoCh06G009830	CsGy3G007420	Cucumber (Gy14) v2	cgybcmoB401
CmoCh06G009830	Carg17680	Silver-seed gourd	carcmoB0185
CmoCh06G009830	Carg24172	Silver-seed gourd	carcmoB0137

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh06G009830	CmoCh14G022260	Cucurbita moschata (Rifu)	cmocmoB224

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh06G009830	Cucurbita maxima (Rimu)	cmacmoB017
CmoCh06G009830	Melon (DHL92) v3.5.1	cmomeB755