MELO3C005682 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C005682
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionATP synthase subunit delta
Locationchr9 : 22306244 .. 22306471 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGGTCTTGTAGCAGTAATACGACGCCGTTTCCACAAATACCGAGACCCTCACCGCAGTACGACGTCGTACTCAGCACAATCCGAGCCCAAAACTGCGAAGAGTAACATGGAGTTGGGGCAGAGCGAGGGAAAGCAACCTTACAATTGCTTGAGTGTAAAGCTTTCTTCCTGCAAATTGGCAGTCCATTTCGTCATTAATCAATCCAAAATCCAATACCCATAA

mRNA sequence

ATGGCGGGTCTTGTAGCAGTAATACGACGCCGTTTCCACAAATACCGAGACCCTCACCGCAGTACGACGTCGTACTCAGCACAATCCGAGCCCAAAACTGCGAAGAGTAACATGGAGTTGGGGCAGAGCGAGGGAAAGCAACCTTACAATTGCTTGAGTGTAAAGCTTTCTTCCTGCAAATTGGCAGTCCATTTCGTCATTAATCAATCCAAAATCCAATACCCATAA

Coding sequence (CDS)

ATGGCGGGTCTTGTAGCAGTAATACGACGCCGTTTCCACAAATACCGAGACCCTCACCGCAGTACGACGTCGTACTCAGCACAATCCGAGCCCAAAACTGCGAAGAGTAACATGGAGTTGGGGCAGAGCGAGGGAAAGCAACCTTACAATTGCTTGAGTGTAAAGCTTTCTTCCTGCAAATTGGCAGTCCATTTCGTCATTAATCAATCCAAAATCCAATACCCATAA

Protein sequence

MAGLVAVIRRRFHKYRDPHRSTTSYSAQSEPKTAKSNMELGQSEGKQPYNCLSVKLSSCKLAVHFVINQSKIQYP*
Homology
[Close]
BLAST of MELO3C005682 vs. TrEMBL
Match: A0A0A0KK84_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G153050 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 8.5e-33
Identity = 74/76 (97.37%), Postives = 74/76 (97.37%), Query Frame = 1 

Query: 1  MAGLVAVIRRRFHKYRDP-HRSTTSYSAQSEPKTAKSNMELGQSEGKQPYNCLSVKLSSC 60
          MAGLVAVIRRRFHKYRDP H STTSYSAQSEPKTAKSNMELGQSEGKQPYNCLSVKLSSC
Sbjct: 1  MAGLVAVIRRRFHKYRDPLHPSTTSYSAQSEPKTAKSNMELGQSEGKQPYNCLSVKLSSC 60

Query: 61 KLAVHFVINQSKIQYP 76
          KLAVHFVINQSKIQYP
Sbjct: 61 KLAVHFVINQSKIQYP 76

[Close]
BLAST of MELO3C005682 vs. NCBI nr
Match: gi|700194913|gb|KGN50090.1| (hypothetical protein Csa_5G153050 [Cucumis sativus])

HSP 1 Score: 147.1 bits (370), Expect = 1.2e-32
Identity = 74/76 (97.37%), Postives = 74/76 (97.37%), Query Frame = 1 

Query: 1  MAGLVAVIRRRFHKYRDP-HRSTTSYSAQSEPKTAKSNMELGQSEGKQPYNCLSVKLSSC 60
          MAGLVAVIRRRFHKYRDP H STTSYSAQSEPKTAKSNMELGQSEGKQPYNCLSVKLSSC
Sbjct: 1  MAGLVAVIRRRFHKYRDPLHPSTTSYSAQSEPKTAKSNMELGQSEGKQPYNCLSVKLSSC 60

Query: 61 KLAVHFVINQSKIQYP 76
          KLAVHFVINQSKIQYP
Sbjct: 61 KLAVHFVINQSKIQYP 76

The following BLAST results are available for this feature:
BLAST of MELO3C005682 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KK84_CUCSA8.5e-3397.37Uncharacterized protein OS=Cucumis sativus GN=Csa_5G153050 PE=4 SV=1[more]
BLAST of MELO3C005682 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700194913|gb|KGN50090.1|1.2e-3297.37hypothetical protein Csa_5G153050 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C005682T1MELO3C005682T1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C005682Csa5G153050Cucumber (Chinese Long) v2cumeB357
MELO3C005682CSPI05G05340Wild cucumber (PI 183967)cpimeB348
MELO3C005682Lsi09G002500Bottle gourd (USVL1VR-Ls)lsimeB012
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C005682Silver-seed gourdcarmeB0903
MELO3C005682Silver-seed gourdcarmeB0920
MELO3C005682Cucumber (Chinese Long) v3cucmeB170
MELO3C005682Cucumber (Chinese Long) v3cucmeB357
MELO3C005682Cucumber (Chinese Long) v3cucmeB426
MELO3C005682Watermelon (97103) v2mewmbB008
MELO3C005682Watermelon (97103) v2mewmbB028
MELO3C005682Watermelon (97103) v2mewmbB030
MELO3C005682Wax gourdmewgoB003
MELO3C005682Melon (DHL92) v3.5.1memeB010
MELO3C005682Cucumber (Gy14) v1cgymeB218
MELO3C005682Cucumber (Gy14) v1cgymeB495
MELO3C005682Cucurbita maxima (Rimu)cmameB250
MELO3C005682Cucurbita maxima (Rimu)cmameB312
MELO3C005682Cucurbita maxima (Rimu)cmameB530
MELO3C005682Cucurbita moschata (Rifu)cmomeB238
MELO3C005682Cucurbita moschata (Rifu)cmomeB305
MELO3C005682Cucurbita moschata (Rifu)cmomeB519
MELO3C005682Cucurbita moschata (Rifu)cmomeB799
MELO3C005682Wild cucumber (PI 183967)cpimeB168
MELO3C005682Wild cucumber (PI 183967)cpimeB412
MELO3C005682Cucumber (Chinese Long) v2cumeB176
MELO3C005682Cucumber (Chinese Long) v2cumeB421
MELO3C005682Watermelon (Charleston Gray)mewcgB018
MELO3C005682Watermelon (Charleston Gray)mewcgB031
MELO3C005682Watermelon (Charleston Gray)mewcgB032
MELO3C005682Watermelon (97103) v1mewmB023
MELO3C005682Watermelon (97103) v1mewmB029
MELO3C005682Cucurbita pepo (Zucchini)cpemeB156
MELO3C005682Cucurbita pepo (Zucchini)cpemeB647
MELO3C005682Bottle gourd (USVL1VR-Ls)lsimeB011
MELO3C005682Bottle gourd (USVL1VR-Ls)lsimeB339
MELO3C005682Cucumber (Gy14) v2cgybmeB144
MELO3C005682Cucumber (Gy14) v2cgybmeB298
MELO3C005682Cucumber (Gy14) v2cgybmeB362