MELO3C005682T1 (mRNA) Melon (DHL92) v3.5.1

Overview
NameMELO3C005682T1
TypemRNA
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionATP synthase subunit delta
Locationchr9 : 22306244 .. 22306471 (-)
Sequence length228
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGGTCTTGTAGCAGTAATACGACGCCGTTTCCACAAATACCGAGACCCTCACCGCAGTACGACGTCGTACTCAGCACAATCCGAGCCCAAAACTGCGAAGAGTAACATGGAGTTGGGGCAGAGCGAGGGAAAGCAACCTTACAATTGCTTGAGTGTAAAGCTTTCTTCCTGCAAATTGGCAGTCCATTTCGTCATTAATCAATCCAAAATCCAATACCCATAA

mRNA sequence

ATGGCGGGTCTTGTAGCAGTAATACGACGCCGTTTCCACAAATACCGAGACCCTCACCGCAGTACGACGTCGTACTCAGCACAATCCGAGCCCAAAACTGCGAAGAGTAACATGGAGTTGGGGCAGAGCGAGGGAAAGCAACCTTACAATTGCTTGAGTGTAAAGCTTTCTTCCTGCAAATTGGCAGTCCATTTCGTCATTAATCAATCCAAAATCCAATACCCATAA

Coding sequence (CDS)

ATGGCGGGTCTTGTAGCAGTAATACGACGCCGTTTCCACAAATACCGAGACCCTCACCGCAGTACGACGTCGTACTCAGCACAATCCGAGCCCAAAACTGCGAAGAGTAACATGGAGTTGGGGCAGAGCGAGGGAAAGCAACCTTACAATTGCTTGAGTGTAAAGCTTTCTTCCTGCAAATTGGCAGTCCATTTCGTCATTAATCAATCCAAAATCCAATACCCATAA

Protein sequence

MAGLVAVIRRRFHKYRDPHRSTTSYSAQSEPKTAKSNMELGQSEGKQPYNCLSVKLSSCKLAVHFVINQSKIQYP*
Homology
[Close]
BLAST of MELO3C005682T1 vs. TrEMBL
Match: A0A0A0KK84_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G153050 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 8.5e-33
Identity = 74/76 (97.37%), Postives = 74/76 (97.37%), Query Frame = 1 

Query: 1  MAGLVAVIRRRFHKYRDP-HRSTTSYSAQSEPKTAKSNMELGQSEGKQPYNCLSVKLSSC 60
          MAGLVAVIRRRFHKYRDP H STTSYSAQSEPKTAKSNMELGQSEGKQPYNCLSVKLSSC
Sbjct: 1  MAGLVAVIRRRFHKYRDPLHPSTTSYSAQSEPKTAKSNMELGQSEGKQPYNCLSVKLSSC 60

Query: 61 KLAVHFVINQSKIQYP 76
          KLAVHFVINQSKIQYP
Sbjct: 61 KLAVHFVINQSKIQYP 76

[Close]
BLAST of MELO3C005682T1 vs. NCBI nr
Match: gi|700194913|gb|KGN50090.1| (hypothetical protein Csa_5G153050 [Cucumis sativus])

HSP 1 Score: 147.1 bits (370), Expect = 1.2e-32
Identity = 74/76 (97.37%), Postives = 74/76 (97.37%), Query Frame = 1 

Query: 1  MAGLVAVIRRRFHKYRDP-HRSTTSYSAQSEPKTAKSNMELGQSEGKQPYNCLSVKLSSC 60
          MAGLVAVIRRRFHKYRDP H STTSYSAQSEPKTAKSNMELGQSEGKQPYNCLSVKLSSC
Sbjct: 1  MAGLVAVIRRRFHKYRDPLHPSTTSYSAQSEPKTAKSNMELGQSEGKQPYNCLSVKLSSC 60

Query: 61 KLAVHFVINQSKIQYP 76
          KLAVHFVINQSKIQYP
Sbjct: 61 KLAVHFVINQSKIQYP 76

The following BLAST results are available for this feature:
BLAST of MELO3C005682T1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KK84_CUCSA8.5e-3397.37Uncharacterized protein OS=Cucumis sativus GN=Csa_5G153050 PE=4 SV=1[more]
BLAST of MELO3C005682T1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700194913|gb|KGN50090.1|1.2e-3297.37hypothetical protein Csa_5G153050 [Cucumis sativus][more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MELO3C005682MELO3C005682gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MELO3C005682T1MELO3C005682T1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C005682T1.cds1MELO3C005682T1.cds1CDS