MELO3C005114.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C005114.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	30S ribosomal protein S12, chloroplastic
Location	chr09 : 17301621 .. 17304070 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAACAGACCGAAAGGAGCACGAGGAGAGACAATAGAAAAAATGTCACTGGTAGACTACGCTTCATCGGACGAAGACGTGCCGGCGGCGGTGGAGGAGGAGAAGGAGGATAATCGTAATCAGTCGGAAAACCACACAGTTACAGAGCCTCAACTCCCCAAGTACGAGCCGAGGCCTCAATCTCCTCCGGTCAACCAGTAATTTTTCTACCATTTCCTTAGATTTTTTAATTCCCAAGCGGGAGAGTTCCAATTCGGATTGCTTTTTTTGCTTTTTCTCTATTCCAATCGATTTTTCCATCATTTTCCTCTTCTAATTTTTCCATAACCTAATATGTTTAACCTTCGGTGTTAATTAATACTTGTTCACCCCGAAAAATCGAAGGTTTTATTCTACTTCTTAATTTTGTATTTGTATCTTTTTTTAGGGTTGTTGTTATTAGCTAAACTGGGAGGAAGGGAGATTGTTGAGTGGTTCTTTAAAGATTAGCGATATCGTGCTTGTACTGTTGAGTTGCTCTCTCCTTTTAGGGAATGCCTTGGCTGCTGATTCGATTGCCATGACCTTGGAACAATATATTTGCTGTTTTTAGGTTTGGATTGTGTTAGGTCAGGTTTAATTTATTTTCTTATGATTGGCTCTGTACTCTGTAGGCCCATTGTTAAGCCAAATCAACAGTTTGAAACTAATGAGGAGTCTTCTTCTGTGCCTTGGGTTGAGCTTCCTGATGCTTCTTTACTCTTGAATTCTCAAACATCTTCTAGTCTTTTTAGTGGTAGCGATCACTCTTCTCGAGTAGCAGCGGCTATGGCTGCCAATGCATCTCGCAAGAGAGAAACAAATGTTTTAGGATCTTCTCTTCCTAGAAGTAAAGTTCCAAGATCGAGCTTGCCTCACTCTAAGAATGTTCCGGATACTTCAGGGACTTTGTTGGTTCCGCCTCAGCTTACTGGAAGGTTTGTTCTAATGCATTTCTAATTTCCCCTTATTTTCCTTTTGTTTTTGCTGGTATTTGCTTTCATTTTTGACATTGTTCCCTGAATAATAAAATAATTGGGTTTGATGCATTTATATATGTGTGTGTGTGTGTGTATAAGGTACTTGTATCCTTGCGAGATGATAGATTGAAAAAAGTTCTATTCATTCCTCAACTAGGAAACACAGTGAATAAATAATTCATATCATTATTGCGTATATGACTATTGAGTATGCATTTGTGTATTCTTCTAGCCCTAAAAATTGTAATAAGCCTATGCCCCTCCACCGACCTCTCTCTGGAGTCCAATGAAAAAATCTGATTCTAAGTTTAGTAGACACGATTGTAATGGCAATGTACTACTTACTACCAAGTTTGGTATAAAATAAACATGGTTTGTGGACTTCTGGCTATGAATAGTCTGTAGGCCTATTGTTTTTCATGAATATTAGTGTTTAAATATTTTTTAATAAACTTGGTTCTACTTATATTCTATGAAAGTAAATGCAACTATGGCTGTTGATAAACATCATTTGCTGCCTTACAAGAACTCTGAAAATTTCATTTCATTAGTAACGATTTACTATGGCTTAAAAGTAACCGTAACTAGTTTAAGATATTGTAAATTCACTGGTTTAAGTCGAAGGAAATTTGACAATTAAATCTATGATGTGAGTCCTCCATCCAGCGCTATTATATCACCTTAAGAAGCAAACACTAGTAGTGTGAAAACTCAAGCTCAAGCTCAAGCTCGCTCGTTTTCTATTCAGTTTAGAAGTTTGAAATATATGGTTTTAGGTGAATTTCAATTACAATTTTGCACCTACTTTTTATTATTTTATTTATTCTGATAGCTATTCTGCATCTTTGCCAGGAGTAACATTGTCACTGAAGATATAAGCAAGCTGTTCGTGAAGAAGTCAGCCAAACCACCCTCGTAATGGTTGTTATCCTTTTCGTTAACTTTCAGATTGATTGGTCTATTGCAGTTGTACAATGTGAAGAATAGTGTACTGATGTTTACTACAGATAATGCAATGGCCGAATTCAGGAATTGTAATGATCTGTGGATTGCGTGCGGTACGTGAACTTTTTCCCCCTCTAGTAGTAATTAATGTGGCACACTTTCGCTCAGTACTTTCTTGTTTCTCATTAATATATATATACACACACACACACACACACATGCATACCTTCATAGACTAAACTTATAATTTAATGAACAAAAATCTACTATTGAGTTTGGCCACTTGTAAGATGGAACAATCATCAAGTTAGACGGATGTAACATGAGAAATGAGTAGAGTATGAGTTCCTGTATCGGAATTAGAAAGCATGGATAAAGGCATTGTATGAGCAAGGACGTGCTTAGGTTTATATTGCTAATAGATTTGGTTTGTGGCATGAGATGAAGAATTTTGTAAACAATCGAACTATTAGATTGGCTAAGGAGGGTTACCACTTGCCATTATTGAA

mRNA sequence

CAACAGACCGAAAGGAGCACGAGGAGAGACAATAGAAAAAATGTCACTGGTAGACTACGCTTCATCGGACGAAGACGTGCCGGCGGCGGTGGAGGAGGAGAAGGAGGATAATCGTAATCAGTCGGAAAACCACACAGTTACAGAGCCTCAACTCCCCAAGTACGAGCCGAGGCCTCAATCTCCTCCGGTCAACCAGCCCATTGTTAAGCCAAATCAACAGTTTGAAACTAATGAGGAGTCTTCTTCTGTGCCTTGGGTTGAGCTTCCTGATGCTTCTTTACTCTTGAATTCTCAAACATCTTCTAGTCTTTTTAGTGGTAGCGATCACTCTTCTCGAGTAGCAGCGGCTATGGCTGCCAATGCATCTCGCAAGAGAGAAACAAATGTTTTAGGATCTTCTCTTCCTAGAAGTAAAGTTCCAAGATCGAGCTTGCCTCACTCTAAGAATGTTCCGGATACTTCAGGGACTTTGTTGGTTCCGCCTCAGCTTACTGGAAGGAGTAACATTGTCACTGAAGATATAAGCAAGCTGTTCGTGAAGAAGTCAGCCAAACCACCCTCGTAATGATAATGCAATGGCCGAATTCAGGAATTGTAATGATCTGTGGATTGCGTGCGGTACGTGAACTTTTTCCCCCTCTAGTAGTAATTAATGTGGCACACTTTCGCTCAGTACTTTCTTGTTTCTCATTAATATATATATACACACACACACACACACACATGCATACCTTCATAGACTAAACTTATAATTTAATGAACAAAAATCTACTATTGAGTTTGGCCACTTGTAAGATGGAACAATCATCAAGTTAGACGGATGTAACATGAGAAATGAGTAGAGTATGAGTTCCTGTATCGGAATTAGAAAGCATGGATAAAGGCATTGTATGAGCAAGGACGTGCTTAGGTTTATATTGCTAATAGATTTGGTTTGTGGCATGAGATGAAGAATTTTGTAAACAATCGAACTATTAGATTGGCTAAGGAGGGTTACCACTTGCCATTATTGAA

Coding sequence (CDS)

ATGTCACTGGTAGACTACGCTTCATCGGACGAAGACGTGCCGGCGGCGGTGGAGGAGGAGAAGGAGGATAATCGTAATCAGTCGGAAAACCACACAGTTACAGAGCCTCAACTCCCCAAGTACGAGCCGAGGCCTCAATCTCCTCCGGTCAACCAGCCCATTGTTAAGCCAAATCAACAGTTTGAAACTAATGAGGAGTCTTCTTCTGTGCCTTGGGTTGAGCTTCCTGATGCTTCTTTACTCTTGAATTCTCAAACATCTTCTAGTCTTTTTAGTGGTAGCGATCACTCTTCTCGAGTAGCAGCGGCTATGGCTGCCAATGCATCTCGCAAGAGAGAAACAAATGTTTTAGGATCTTCTCTTCCTAGAAGTAAAGTTCCAAGATCGAGCTTGCCTCACTCTAAGAATGTTCCGGATACTTCAGGGACTTTGTTGGTTCCGCCTCAGCTTACTGGAAGGAGTAACATTGTCACTGAAGATATAAGCAAGCTGTTCGTGAAGAAGTCAGCCAAACCACCCTCGTAA

Protein sequence

MSLVDYASSDEDVPAAVEEEKEDNRNQSENHTVTEPQLPKYEPRPQSPPVNQPIVKPNQQFETNEESSSVPWVELPDASLLLNSQTSSSLFSGSDHSSRVAAAMAANASRKRETNVLGSSLPRSKVPRSSLPHSKNVPDTSGTLLVPPQLTGRSNIVTEDISKLFVKKSAKPPS

Homology

[Close]

BLAST of MELO3C005114.2 vs. NCBI nr
Match: XP_008465558.1 (PREDICTED: uncharacterized protein LOC103503186 [Cucumis melo])

HSP 1 Score: 302.0 bits (772), Expect = 1.3e-78
Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 0


Query: 1   MSLVDYASSDEDVPAAVEEEKEDNRNQSENHTVTEPQLPKYEPRPQSPPVNQPIVKPNQQ 60
           MSLVDYASSDEDVPAAVEEEKEDNRNQSENHTVTEPQLPKYEPRPQSPPVNQPIVKPNQQ
Sbjct: 1   MSLVDYASSDEDVPAAVEEEKEDNRNQSENHTVTEPQLPKYEPRPQSPPVNQPIVKPNQQ 60

Query: 61  FETNEESSSVPWVELPDASLLLNSQTSSSLFSGSDHSSRVAAAMAANASRKRETNVLGSS 120
           FETNEESSSVPWVELPDASLLLNSQTSSSLFSGSDHSSRVAAAMAANASRKRETNVLGSS
Sbjct: 61  FETNEESSSVPWVELPDASLLLNSQTSSSLFSGSDHSSRVAAAMAANASRKRETNVLGSS 120

Query: 121 LPRXXXXXXXXXXXKNVPDTSGTLLVPPQLTGRSNIVTEDISKLFVKKSAKPPS 175
           LPRXXXXXXXXXXXKNVPDTSGTLLVPPQLTGRSNIVTEDISKLFVKKSAKPPS
Sbjct: 121 LPRXXXXXXXXXXXKNVPDTSGTLLVPPQLTGRSNIVTEDISKLFVKKSAKPPS 174

[Close]

BLAST of MELO3C005114.2 vs. NCBI nr
Match: XP_004143757.1 (PREDICTED: uncharacterized protein LOC101221543 isoform X1 [Cucumis sativus] >XP_011655268.1 PREDICTED: uncharacterized protein LOC101221543 isoform X2 [Cucumis sativus] >KGN51124.1 hypothetical protein Csa_5G457750 [Cucumis sativus])

HSP 1 Score: 282.7 bits (722), Expect = 8.3e-73
Identity = 158/173 (91.33%), Postives = 163/173 (94.22%), Query Frame = 0


Query: 1   MSLVDYASSDEDVPAAVEEEKEDNRNQSENHTVTEPQLPKYEPRPQSPPVNQPIVKPNQQ 60
           MSLVDYASSDEDVPAAVEEE++DNRNQSENH +TEP LPK+EPRPQSPP+NQPIVKPNQQ
Sbjct: 1   MSLVDYASSDEDVPAAVEEEEKDNRNQSENHIITEPHLPKHEPRPQSPPLNQPIVKPNQQ 60

Query: 61  FETNEESSSVPWVELPDASLLLNSQTSSSLFSGSDHSSRVAAAMAANASRKRETNVLGSS 120
           FETNEESSSVPWV LPDASLLLNS TSSSLFSGSDHSSRVAAAMAANASRKRETNVLGSS
Sbjct: 61  FETNEESSSVPWVGLPDASLLLNSPTSSSLFSGSDHSSRVAAAMAANASRKRETNVLGSS 120

Query: 121 LPRXXXXXXXXXXXKNVPDTSGTLLVPPQLTGRSNIVTEDISKLFVKKSAKPP 174
           LPR   XXXXXX  KNVPDTSG LLVPPQLTGRSNIVTEDISKLFVKKSAKPP
Sbjct: 121 LPRSKFXXXXXXHSKNVPDTSGALLVPPQLTGRSNIVTEDISKLFVKKSAKPP 173

[Close]

BLAST of MELO3C005114.2 vs. NCBI nr
Match: XP_022990875.1 (uncharacterized protein LOC111487632 isoform X1 [Cucurbita maxima])

HSP 1 Score: 191.0 bits (484), Expect = 3.3e-45
Identity = 121/138 (87.68%), Postives = 124/138 (89.86%), Query Frame = 0


Query: 35  EPQLPKYEPRPQSPPVNQPIVKPNQQFETNEESSSVPWVELPDASLLLNSQTSSSLFSGS 94
           EPQ P  EPR QS PVNQPI+KP Q  ETNE+ SSVP VELPDASLLLNS TSSSL SGS
Sbjct: 38  EPQFPNQEPRSQSHPVNQPILKPKQPSETNED-SSVPSVELPDASLLLNSPTSSSLLSGS 97

Query: 95  DHSSRVAAAMAANASRKRETNVLGSSLPRXXXXXXXXXXXKNVPDTSGTLLVPPQLTGRS 154
           DHSSRVAAAMAANASRKRETNVLGSSLPRXXXXXXXXXXXKNVP+T G LLVPPQLTGRS
Sbjct: 98  DHSSRVAAAMAANASRKRETNVLGSSLPRXXXXXXXXXXXKNVPETVGRLLVPPQLTGRS 157

Query: 155 NIVTEDISKLFVKKSAKP 173
           NIVTEDISKLFVKKSAKP
Sbjct: 158 NIVTEDISKLFVKKSAKP 174

[Close]

BLAST of MELO3C005114.2 vs. NCBI nr
Match: XP_022964179.1 (uncharacterized protein LOC111464275 isoform X1 [Cucurbita moschata])

HSP 1 Score: 188.0 bits (476), Expect = 2.8e-44
Identity = 120/138 (86.96%), Postives = 123/138 (89.13%), Query Frame = 0


Query: 35  EPQLPKYEPRPQSPPVNQPIVKPNQQFETNEESSSVPWVELPDASLLLNSQTSSSLFSGS 94
           EPQ P  EPR QS PVNQ I+KP Q  ETNE+ SSVP VELPDASLLLNS TSSSL SGS
Sbjct: 37  EPQFPNQEPRSQSHPVNQSILKPKQPSETNED-SSVPSVELPDASLLLNSPTSSSLLSGS 96

Query: 95  DHSSRVAAAMAANASRKRETNVLGSSLPRXXXXXXXXXXXKNVPDTSGTLLVPPQLTGRS 154
           DHSSRVAAAMAANASRKRETNVLGSSLPRXXXXXXXXXXXKNVP+T G LLVPPQLTGRS
Sbjct: 97  DHSSRVAAAMAANASRKRETNVLGSSLPRXXXXXXXXXXXKNVPETVGRLLVPPQLTGRS 156

Query: 155 NIVTEDISKLFVKKSAKP 173
           NIVTEDISKLFVKKSAKP
Sbjct: 157 NIVTEDISKLFVKKSAKP 173

[Close]

BLAST of MELO3C005114.2 vs. NCBI nr
Match: XP_023517928.1 (uncharacterized protein LOC111781514 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 186.8 bits (473), Expect = 6.2e-44
Identity = 127/172 (73.84%), Postives = 130/172 (75.58%), Query Frame = 0


Query: 1   MSLVDYASSDEDVPAAVEEEKEDNRNQSENHTVTEPQLPKYEPRPQSPPVNQPIVKPNQQ 60
           MSLVDYA                            PQ P  EPR QS PVNQPI+KP Q 
Sbjct: 1   MSLVDYAXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQFPNQEPRSQSHPVNQPILKPKQP 60

Query: 61  FETNEESSSVPWVELPDASLLLNSQTSSSLFSGSDHSSRVAAAMAANASRKRETNVLGSS 120
            ETNE+ SSVP VELPDASLLLNS TSSSL SGSDHSSRVAAAMAANASRKRETNVLGSS
Sbjct: 61  SETNED-SSVPSVELPDASLLLNSPTSSSLLSGSDHSSRVAAAMAANASRKRETNVLGSS 120

Query: 121 LPRXXXXXXXXXXXKNVPDTSGTLLVPPQLTGRSNIVTEDISKLFVKKSAKP 173
           LPRXXXXXXXXXXXKNVP+T G LLVPPQLTGRSNIVTEDISKLFVKKSAKP
Sbjct: 121 LPRXXXXXXXXXXXKNVPETVGRLLVPPQLTGRSNIVTEDISKLFVKKSAKP 171

[Close]

BLAST of MELO3C005114.2 vs. TAIR10
Match: AT5G13470.1 (unknown protein)

HSP 1 Score: 90.5 bits (223), Expect = 1.1e-18
Identity = 78/171 (45.61%), Postives = 98/171 (57.31%), Query Frame = 0


Query: 1   MSLVDY--ASSDEDVPAAVEEEKEDNRNQSENHTVTEPQLPKYEPRPQSPPVNQPIVKPN 60
           MSLVDY  +SSD+DV AA  EEK                LP+ + R  SP  + P     
Sbjct: 1   MSLVDYDDSSSDDDVLAA--EEK---------------PLPQTQKRLVSPAQSFP--PKR 60

Query: 61  QQFETNEESSSVPWVELPDASLLLNSQTSSSLFSGSDHSSRVAAAMAANASRKRETNVLG 120
           Q+FE +E        +LPDA LLL S T + + +G DH+S VAAAMA +A RKR+ +   
Sbjct: 61  QRFEQDESVE-----KLPDALLLLESPTLAQV-TGGDHASVVAAAMAESALRKRDLSGNA 120

Query: 121 SSLP-RXXXXXXXXXXXKNVPDTSGTLLVPPQLTGRSNIVTEDISKLFVKK 169
           SSLP R           KN P+T G +LVPPQL GRSN+ TED+S+LFVKK
Sbjct: 121 SSLPRRPKLPRGNLPHSKNYPETLGNVLVPPQLKGRSNVATEDMSRLFVKK 146

[Close]

BLAST of MELO3C005114.2 vs. TrEMBL
Match: tr|A0A1S3CP27|A0A1S3CP27_CUCME (uncharacterized protein LOC103503186 OS=Cucumis melo OX=3656 GN=LOC103503186 PE=4 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 8.8e-79
Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 0


Query: 1   MSLVDYASSDEDVPAAVEEEKEDNRNQSENHTVTEPQLPKYEPRPQSPPVNQPIVKPNQQ 60
           MSLVDYASSDEDVPAAVEEEKEDNRNQSENHTVTEPQLPKYEPRPQSPPVNQPIVKPNQQ
Sbjct: 1   MSLVDYASSDEDVPAAVEEEKEDNRNQSENHTVTEPQLPKYEPRPQSPPVNQPIVKPNQQ 60

Query: 61  FETNEESSSVPWVELPDASLLLNSQTSSSLFSGSDHSSRVAAAMAANASRKRETNVLGSS 120
           FETNEESSSVPWVELPDASLLLNSQTSSSLFSGSDHSSRVAAAMAANASRKRETNVLGSS
Sbjct: 61  FETNEESSSVPWVELPDASLLLNSQTSSSLFSGSDHSSRVAAAMAANASRKRETNVLGSS 120

Query: 121 LPRXXXXXXXXXXXKNVPDTSGTLLVPPQLTGRSNIVTEDISKLFVKKSAKPPS 175
           LPRXXXXXXXXXXXKNVPDTSGTLLVPPQLTGRSNIVTEDISKLFVKKSAKPPS
Sbjct: 121 LPRXXXXXXXXXXXKNVPDTSGTLLVPPQLTGRSNIVTEDISKLFVKKSAKPPS 174

[Close]

BLAST of MELO3C005114.2 vs. TrEMBL
Match: tr|A0A0A0KQH2|A0A0A0KQH2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G457750 PE=4 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 5.5e-73
Identity = 158/173 (91.33%), Postives = 163/173 (94.22%), Query Frame = 0


Query: 1   MSLVDYASSDEDVPAAVEEEKEDNRNQSENHTVTEPQLPKYEPRPQSPPVNQPIVKPNQQ 60
           MSLVDYASSDEDVPAAVEEE++DNRNQSENH +TEP LPK+EPRPQSPP+NQPIVKPNQQ
Sbjct: 1   MSLVDYASSDEDVPAAVEEEEKDNRNQSENHIITEPHLPKHEPRPQSPPLNQPIVKPNQQ 60

Query: 61  FETNEESSSVPWVELPDASLLLNSQTSSSLFSGSDHSSRVAAAMAANASRKRETNVLGSS 120
           FETNEESSSVPWV LPDASLLLNS TSSSLFSGSDHSSRVAAAMAANASRKRETNVLGSS
Sbjct: 61  FETNEESSSVPWVGLPDASLLLNSPTSSSLFSGSDHSSRVAAAMAANASRKRETNVLGSS 120

Query: 121 LPRXXXXXXXXXXXKNVPDTSGTLLVPPQLTGRSNIVTEDISKLFVKKSAKPP 174
           LPR   XXXXXX  KNVPDTSG LLVPPQLTGRSNIVTEDISKLFVKKSAKPP
Sbjct: 121 LPRSKFXXXXXXHSKNVPDTSGALLVPPQLTGRSNIVTEDISKLFVKKSAKPP 173

[Close]

BLAST of MELO3C005114.2 vs. TrEMBL
Match: tr|A0A2I4GSW0|A0A2I4GSW0_9ROSI (uncharacterized protein LOC109010573 OS=Juglans regia OX=51240 GN=LOC109010573 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.9e-25
Identity = 93/179 (51.96%), Postives = 108/179 (60.34%), Query Frame = 0


Query: 1   MSLVDY-ASSDEDVPAAVEEEKEDNRNQSENHTVTEPQLPKYEPRPQSPPVNQPIVKPNQ 60
           MSLVDY +SSD+DV  A EEE  D   Q        P LP    R    P        NQ
Sbjct: 1   MSLVDYGSSSDDDVSGAEEEEPRDEPEQGPKDIPHRPVLP--HNRVSETP-------SNQ 60

Query: 61  QFETNEESSSVPWVE-LPDASLLLN-SQTSSSLFSGSDHSSRVAAAMAANASRKRET--N 120
           Q +++   SS P +E LPDASLLLN    +S L S SDHSSRVAAAMA N SRKR++  +
Sbjct: 61  QADSSAAHSSEPSIERLPDASLLLNLPAIASGLMSSSDHSSRVAAAMAENVSRKRDSKDS 120

Query: 121 VLGSSLPRXXXXXXXXXXXKNVPDTSGTLLVPPQLTGRSNIVTEDISKLFVKKSAKPPS 175
            L SSLPR           +NVPDT G +LVPPQL GRSN+VTEDI KLFV+K A+P S
Sbjct: 121 TLTSSLPRSKVPRGTLRHSRNVPDTVGGVLVPPQLNGRSNVVTEDIGKLFVRKHAEPSS 170

[Close]

BLAST of MELO3C005114.2 vs. TrEMBL
Match: tr|A0A2P4HFK0|A0A2P4HFK0_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_26637 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 2.8e-24
Identity = 72/117 (61.54%), Postives = 82/117 (70.09%), Query Frame = 0


Query: 59  QQFETNEESSSVPWVELPDASLLLNSQTS-SSLFSGSDHSSRVAAAMAANASRKRETNVL 118
           QQ E+   SS      LPDAS LLNS  S S+L S SDHSSRVAAAMA NASRKR++N L
Sbjct: 52  QQPESTAHSSEPSIERLPDASFLLNSPASLSNLMSSSDHSSRVAAAMAENASRKRDSNGL 111

Query: 119 GSSLPRXXXXXXXXXXXKNVPDTSGTLLVPPQLTGRSNIVTEDISKLFVKKSAKPPS 175
            SSLPR           +NVPDT G +LVPPQL+GRSN+VTEDI KLFV+K A+P S
Sbjct: 112 ASSLPRNKVPRGTLPHSRNVPDTVGGVLVPPQLSGRSNVVTEDIGKLFVRKHAEPSS 168

[Close]

BLAST of MELO3C005114.2 vs. TrEMBL
Match: tr|M5X374|M5X374_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa018738mg PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.8e-23
Identity = 79/155 (50.97%), Postives = 100/155 (64.52%), Query Frame = 0


Query: 1   MSLVDYASSDEDVPAAVEEEKEDNRNQSENHTVTEP-QLPKYEPRPQSPPVNQPIVKPNQ 60
           MSLVDYASSD+DV   + E KE+           EP Q+P+ +P+P + P  Q +V   Q
Sbjct: 1   MSLVDYASSDDDVSEEIRENKEN-----------EPAQVPQDDPQPPTRPHTQSVVSSYQ 60

Query: 61  QFETNEESSSVPWVELPDASLLLNSQT-SSSLFSGSDHSSRVAAAMAANASRKRETNVLG 120
           Q E+   SS+    +LPDAS+LLNS   SS++FSG DHSSRVAAA+A +ASRKRE+N   
Sbjct: 61  QPESTAHSSAPSIEKLPDASMLLNSPVFSSNMFSGGDHSSRVAAAIAESASRKRESNEFV 120

Query: 121 SSLPRXXXXXXXXXXXKNVPDTSGTLLVPPQLTGR 154
           SS+PR           KNVPDT G +LVPPQL+GR
Sbjct: 121 SSVPRSKVPKGNLPHSKNVPDTIGGMLVPPQLSGR 144

The following BLAST results are available for this feature:

BLAST of MELO3C005114.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008465558.1	1.3e-78	100.00	PREDICTED: uncharacterized protein LOC103503186 [Cucumis melo]	[more]
XP_004143757.1	8.3e-73	91.33	PREDICTED: uncharacterized protein LOC101221543 isoform X1 [Cucumis sativus] >XP...	[more]
XP_022990875.1	3.3e-45	87.68	uncharacterized protein LOC111487632 isoform X1 [Cucurbita maxima]	[more]
XP_022964179.1	2.8e-44	86.96	uncharacterized protein LOC111464275 isoform X1 [Cucurbita moschata]	[more]
XP_023517928.1	6.2e-44	73.84	uncharacterized protein LOC111781514 isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of MELO3C005114.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G13470.1	1.1e-18	45.61	unknown protein	[more]

BLAST of MELO3C005114.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of MELO3C005114.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CP27\|A0A1S3CP27_CUCME	8.8e-79	100.00	uncharacterized protein LOC103503186 OS=Cucumis melo OX=3656 GN=LOC103503186 PE=...	[more]
tr\|A0A0A0KQH2\|A0A0A0KQH2_CUCSA	5.5e-73	91.33	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G457750 PE=4 SV=1	[more]
tr\|A0A2I4GSW0\|A0A2I4GSW0_9ROSI	1.9e-25	51.96	uncharacterized protein LOC109010573 OS=Juglans regia OX=51240 GN=LOC109010573 P...	[more]
tr\|A0A2P4HFK0\|A0A2P4HFK0_QUESU	2.8e-24	61.54	Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_26637 PE=4 SV=1	[more]
tr\|M5X374\|M5X374_PRUPE	1.8e-23	50.97	Uncharacterized protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa018738m...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0008152	metabolic process
biological_process	GO:0071704	organic substance metabolic process
biological_process	GO:0019637	organophosphate metabolic process
biological_process	GO:0006796	phosphate-containing compound metabolic process
biological_process	GO:0044238	primary metabolic process
biological_process	GO:0044710	single-organism metabolic process
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0016491	oxidoreductase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C005114.2.1	MELO3C005114.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 112..152
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 87..152
None	No IPR available	PANTHER	PTHR33912	FAMILY NOT NAMED	coord: 1..172
None	No IPR available	PANTHER	PTHR33912:SF3	SUBFAMILY NOT NAMED	coord: 1..172

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C005114.2	Csa5G457750	Cucumber (Chinese Long) v2	cumedB341
MELO3C005114.2	CSPI05G15820	Wild cucumber (PI 183967)	cpimedB343
MELO3C005114.2	Cucsa.317670	Cucumber (Gy14) v1	cgymedB524
MELO3C005114.2	CmaCh04G022160	Cucurbita maxima (Rimu)	cmamedB721
MELO3C005114.2	CmoCh04G023170	Cucurbita moschata (Rifu)	cmomedB714
MELO3C005114.2	Lsi09G008210	Bottle gourd (USVL1VR-Ls)	lsimedB014
MELO3C005114.2	Cp4.1LG01g19300	Cucurbita pepo (Zucchini)	cpemedB419
MELO3C005114.2	CsGy5G015560	Cucumber (Gy14) v2	cgybmedB303
MELO3C005114.2	Cla005920	Watermelon (97103) v1	medwmB028
MELO3C005114.2	ClCG01G007790	Watermelon (Charleston Gray)	medwcgB018
MELO3C005114.2	Cla97C01G008110	Watermelon (97103) v2	medwmbB008
MELO3C005114.2	Bhi12G000955	Wax gourd	medwgoB003
MELO3C005114.2	Carg17749	Silver-seed gourd	carmedB0487
MELO3C005114.2	CsaV3_5G024860	Cucumber (Chinese Long) v3	cucmedB354

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C005114.2	Cucurbita maxima (Rimu)	cmamedB286
MELO3C005114.2	Cucurbita moschata (Rifu)	cmomedB272
MELO3C005114.2	Cucurbita pepo (Zucchini)	cpemedB184
MELO3C005114.2	Silver-seed gourd	carmedB0832