ClCG01G007790 (gene) Watermelon (Charleston Gray)

NameClCG01G007790
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionUnknown protein
LocationCG_Chr01 : 8873346 .. 8875753 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GAGAGAGAGAGAGAGAGAGAAGAGTAGAAAGAAAGAGACAAACAAAAATGTCATTGGTAGACTACGCTTCGTCGGACGACGACGTCTCGGCGGCGGAGGTGGAGGAGGTCGTGGAGGAAAATCGGAAACAGCCGGAAAACCACACTGTCGCAGAGCCTCAATCCCCCAAGCCCGAGCCGAGGCCTCAATCCCCTCCCATCAACCGGTAATTTTTCTAACCTTTCTTCTGATTTTCTAATTCCCAAACGGAAGAGTTCCAATTCCAATTTCTTTTTTTGCTTTTTCTCCATTCCAATTGAATTTCAATCATTTTCCTCTTTTGATTTTTCATAAACCAAATAGATTTTGTGTTCGGAGTTAATTACTACTTGTTTTCCCCCAAACAATTGGAGGTTCTATGCCAGTTCCGGTTCTCCTTAATTTTGTGTTAGGGTTTTTGTTATTAGTTAACCTGGAAGGAAGGGATGTTGTTGTGCTTGTGCTTCCAGTTCCAGATGTTGTTGACTGGTTCTGTAAGGATTAGCGATATTGCGTTCGTACTGTTTAAGTGGCTTTCTGCTTTTAGGGAATGCTTTAGCTGCTGATTCAATTACCTTGACCTTGGTATAAAATATTTGCTGTTTTTAGCTTTATTTTGTGTTAGGTCAGGTGTAATTTATTTCCTTGTTATTGGCTCTGTACTCTGTAGGCCGATTGTTAAGCCAAATCAACAGATTGAAACTAATGAGGAGTCTCCTGTGCCTTCGGTTGAGCTTCCTGACGCTTCTTTACTCTTGAATTCTCCTACATCTTCTAGTCTTTTTAGTGGTAGCGATCACTCTTCTCGAGTGGCAGCGGCTATGGCTGCCAATGCATCTCGCAAGAGAGAAACAAATGTTTTAGGATCCTCTCTTCCCAGGAGTAAAGTTCCAAGGTCGAGCTTGCCTCACCCTAAGAATGTCCCGGATACTTCAGGCAGTTTGTTGGTTCCCCCTCAGCTTACCGGCAGGTTCGTTCTAATGTATTTTCCCTCATTTTCCTTTTGTTTATGCTAGTATTTGCTTTCGCTTAAAGGTAATGACATTGTTCCCTGAATATGTGATACCACAAGAAAGAAAATAATTGGGTTTGATGCATTTATATTTAGTTTATGAAGTCTGCACTCGGTGATGAAAATCAAATCATTTCGAAATCTTGTATATGCTGATGAGTACATTGGCATAGATAGATTCATAAGGTAGTATGCATGTACGTCTTCTTCTAGCCCTAGAAAATTGTAATAAGTTTGAAACCCTACACCTTGACCTTGATAACTCTTTTATTTATTTATTTCCCGTGAAAGATCTCTCTCTAGCGTCCAACAAAAACCTATGATTCTAAGTTTAGCACACACGGTAATCGTGGTAATGTATGCTTATGAGGTGATAGATTGAAAATAGTTGCATTCATTATTCAACTAGGAAACACAATTAATAAATAAATCATATCCTTATAGCCTATAGGACTATGGAGAATGTGTGTACATATTCTTCTAGCCCTAGAAAATTGTAACAAGTCTATGCCCCTCGACCTCCATGTAGATAACTCTTTATATATTTATTCCCCGTGAAAGACCTCTCTATGGATTCCAATGAAAATATATTATGCTAATTTAGTAGACACGATCAGAATGGCAATGCAGTACTAAGAAGTTTGGTATAAGATAAACATGGTTTGTGGACTTCTGGCCCTGAATAGTCTGTAAGCCTATCTTTTTCTTTAATCAATATTGGTGTTTGAAATTCTGTTAATACACTTGGTTCTATCCTATGAAAGTAAATGCAGCTATGGGAGTTGGTAATCATCATTTTCTGCCTTGCAAGAACTCTGAGTGTTTCATTTGTAATGCTTTACTATGGCTAAAAAATAACCATAACTCCTTTAAGATATTGTAAATTCACTGGTTTAAGTCGGAAGGAAATTTGACAATTAAATCTTTTAACTGGTGTGATGGTCTTTTCTTTTTTTAATTGATTGCTACTTTCTCTGTCACTGTTCTTTAATATGCTCGATGTGCTTGAGTCCTCCAGCCAGCGTTATTATATCACCTTAAGAATCAAACATAAAGATGCAGAAGTGTTAGAGCTCAACTTTGGTAGTTCGAAATAGGAATTTGGGTGAATTCTGATTGTAATTCTGCACTTGGTTTTGCCTTCGCCAGGAGTAACATTGTCACTGAAGATATAAGCAAGCTGTTCGTGAAGAAGTCAGCCAAACCACCCTCGTAATCGTTGTTTTCCCTTTCATTAATAGTTTGTAGAACTTTCAGATTGATTGGTCTAATGCAGTTGTACCATGTGAAGAATAGTTTACTGATGTTTACTACAGATAATGCAATGGCCGAAGTTCAGGTACTTGTCTCTTCAATCATTTCTCAGGAATTGCAATGA

mRNA sequence

GAGAGAGAGAGAGAGAGAGAAGAGTAGAAAGAAAGAGACAAACAAAAATGTCATTGGTAGACTACGCTTCGTCGGACGACGACGTCTCGGCGGCGGAGGTGGAGGAGGTCGTGGAGGAAAATCGGAAACAGCCGGAAAACCACACTGTCGCAGAGCCTCAATCCCCCAAGCCCGAGCCGAGGCCTCAATCCCCTCCCATCAACCGGCCGATTGTTAAGCCAAATCAACAGATTGAAACTAATGAGGAGTCTCCTGTGCCTTCGGTTGAGCTTCCTGACGCTTCTTTACTCTTGAATTCTCCTACATCTTCTAGTCTTTTTAGTGGTAGCGATCACTCTTCTCGAGTGGCAGCGGCTATGGCTGCCAATGCATCTCGCAAGAGAGAAACAAATGTTTTAGGATCCTCTCTTCCCAGGAGTAAAGTTCCAAGGTCGAGCTTGCCTCACCCTAAGAATGTCCCGGATACTTCAGGCAGTTTGTTGGTTCCCCCTCAGCTTACCGGCAGGAGTAACATTGTCACTGAAGATATAAGCAAGCTATTGATTGGTCTAATGCAGTTGTACCATGTGAAGAATAGTTTACTGATGTTTACTACAGATAATGCAATGGCCGAAGTTCAGGTACTTGTCTCTTCAATCATTTCTCAGGAATTGCAATGA

Coding sequence (CDS)

ATGTCATTGGTAGACTACGCTTCGTCGGACGACGACGTCTCGGCGGCGGAGGTGGAGGAGGTCGTGGAGGAAAATCGGAAACAGCCGGAAAACCACACTGTCGCAGAGCCTCAATCCCCCAAGCCCGAGCCGAGGCCTCAATCCCCTCCCATCAACCGGCCGATTGTTAAGCCAAATCAACAGATTGAAACTAATGAGGAGTCTCCTGTGCCTTCGGTTGAGCTTCCTGACGCTTCTTTACTCTTGAATTCTCCTACATCTTCTAGTCTTTTTAGTGGTAGCGATCACTCTTCTCGAGTGGCAGCGGCTATGGCTGCCAATGCATCTCGCAAGAGAGAAACAAATGTTTTAGGATCCTCTCTTCCCAGGAGTAAAGTTCCAAGGTCGAGCTTGCCTCACCCTAAGAATGTCCCGGATACTTCAGGCAGTTTGTTGGTTCCCCCTCAGCTTACCGGCAGGAGTAACATTGTCACTGAAGATATAAGCAAGCTATTGATTGGTCTAATGCAGTTGTACCATGTGAAGAATAGTTTACTGATGTTTACTACAGATAATGCAATGGCCGAAGTTCAGGTACTTGTCTCTTCAATCATTTCTCAGGAATTGCAATGA

Protein sequence

MSLVDYASSDDDVSAAEVEEVVEENRKQPENHTVAEPQSPKPEPRPQSPPINRPIVKPNQQIETNEESPVPSVELPDASLLLNSPTSSSLFSGSDHSSRVAAAMAANASRKRETNVLGSSLPRSKVPRSSLPHPKNVPDTSGSLLVPPQLTGRSNIVTEDISKLLIGLMQLYHVKNSLLMFTTDNAMAEVQVLVSSIISQELQ
BLAST of ClCG01G007790 vs. TrEMBL
Match: G3MLK6_9ACAR (Uncharacterized protein OS=Amblyomma maculatum PE=2 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 6.4e-27
Identity = 92/179 (51.40%), Postives = 109/179 (60.89%), Query Frame = 1

Query: 1   MSLVDYASS----DDDV-----SAAEVEEVVEENRKQPENHTVAEPQSPKPEPRPQSPPI 60
           MSLVDYA S    DDD      +AA V   VEE  K+         Q  + E  P +PP 
Sbjct: 1   MSLVDYADSSSDQDDDTDKEAAAAAAVAAAVEEEIKKQ--------QQEEEEMPPVAPPS 60

Query: 61  NRPIVKPNQQIETNEESPVPSVE-LPDASLLLNSPTSSSLFS-GSDHSSRVAAAMAANAS 120
           +RP    +         P P +E LPDASLLL SP+ SS  + G+DHSSRVAAAMAA+ S
Sbjct: 61  SRPSASVSPL-------PPPMIERLPDASLLLASPSFSSHQTVGTDHSSRVAAAMAASES 120

Query: 121 RKRETNVLGSSLP--RSKVPRSSLPHPKNVPDTSGSLLVPPQLTGRSNIVTEDISKLLI 167
           RKR  N  GS+ P  RSK+PR  LPH +NVPDTS   L+PPQL GRSN+VTEDISKL +
Sbjct: 121 RKRHHN--GSAFPSTRSKLPRGQLPHSRNVPDTS---LIPPQLRGRSNVVTEDISKLFV 159

BLAST of ClCG01G007790 vs. TAIR10
Match: AT5G13470.1 (AT5G13470.1 unknown protein)

HSP 1 Score: 119.0 bits (297), Expect = 3.4e-27
Identity = 82/170 (48.24%), Postives = 103/170 (60.59%), Query Frame = 1

Query: 1   MSLVDY--ASSDDDVSAAEVEEVVEENRKQPENHTVAEPQSPKPEPRPQSPPINRPIVKP 60
           MSLVDY  +SSDDDV AAE     E+   Q +   V+  QS  P+               
Sbjct: 1   MSLVDYDDSSSDDDVLAAE-----EKPLPQTQKRLVSPAQSFPPK--------------- 60

Query: 61  NQQIETNEESPVPSVE-LPDASLLLNSPTSSSLFSGSDHSSRVAAAMAANASRKRETNVL 120
            Q+ E +E     SVE LPDA LLL SPT + + +G DH+S VAAAMA +A RKR+ +  
Sbjct: 61  RQRFEQDE-----SVEKLPDALLLLESPTLAQV-TGGDHASVVAAAMAESALRKRDLSGN 120

Query: 121 GSSLP-RSKVPRSSLPHPKNVPDTSGSLLVPPQLTGRSNIVTEDISKLLI 167
            SSLP R K+PR +LPH KN P+T G++LVPPQL GRSN+ TED+S+L +
Sbjct: 121 ASSLPRRPKLPRGNLPHSKNYPETLGNVLVPPQLKGRSNVATEDMSRLFV 144

BLAST of ClCG01G007790 vs. NCBI nr
Match: gi|659072425|ref|XP_008465558.1| (PREDICTED: uncharacterized protein LOC103503186 isoform X1 [Cucumis melo])

HSP 1 Score: 273.9 bits (699), Expect = 2.3e-70
Identity = 145/167 (86.83%), Postives = 151/167 (90.42%), Query Frame = 1

Query: 1   MSLVDYASSDDDVSAAEVEEVVEENRKQPENHTVAEPQSPKPEPRPQSPPINRPIVKPNQ 60
           MSLVDYASSD+DV AA VEE  E+NR Q ENHTV EPQ PK EPRPQSPP+N+PIVKPNQ
Sbjct: 1   MSLVDYASSDEDVPAA-VEEEKEDNRNQSENHTVTEPQLPKYEPRPQSPPVNQPIVKPNQ 60

Query: 61  QIETNEESP-VPSVELPDASLLLNSPTSSSLFSGSDHSSRVAAAMAANASRKRETNVLGS 120
           Q ETNEES  VP VELPDASLLLNS TSSSLFSGSDHSSRVAAAMAANASRKRETNVLGS
Sbjct: 61  QFETNEESSSVPWVELPDASLLLNSQTSSSLFSGSDHSSRVAAAMAANASRKRETNVLGS 120

Query: 121 SLPRSKVPRSSLPHPKNVPDTSGSLLVPPQLTGRSNIVTEDISKLLI 167
           SLPRSKVPRSSLPH KNVPDTSG+LLVPPQLTGRSNIVTEDISKL +
Sbjct: 121 SLPRSKVPRSSLPHSKNVPDTSGTLLVPPQLTGRSNIVTEDISKLFV 166

BLAST of ClCG01G007790 vs. NCBI nr
Match: gi|449452018|ref|XP_004143757.1| (PREDICTED: uncharacterized protein LOC101221543 isoform X1 [Cucumis sativus])

HSP 1 Score: 266.2 bits (679), Expect = 4.8e-68
Identity = 140/167 (83.83%), Postives = 148/167 (88.62%), Query Frame = 1

Query: 1   MSLVDYASSDDDVSAAEVEEVVEENRKQPENHTVAEPQSPKPEPRPQSPPINRPIVKPNQ 60
           MSLVDYASSD+DV AA VEE  ++NR Q ENH + EP  PK EPRPQSPP+N+PIVKPNQ
Sbjct: 1   MSLVDYASSDEDVPAA-VEEEEKDNRNQSENHIITEPHLPKHEPRPQSPPLNQPIVKPNQ 60

Query: 61  QIETNEESP-VPSVELPDASLLLNSPTSSSLFSGSDHSSRVAAAMAANASRKRETNVLGS 120
           Q ETNEES  VP V LPDASLLLNSPTSSSLFSGSDHSSRVAAAMAANASRKRETNVLGS
Sbjct: 61  QFETNEESSSVPWVGLPDASLLLNSPTSSSLFSGSDHSSRVAAAMAANASRKRETNVLGS 120

Query: 121 SLPRSKVPRSSLPHPKNVPDTSGSLLVPPQLTGRSNIVTEDISKLLI 167
           SLPRSK PRSSLPH KNVPDTSG+LLVPPQLTGRSNIVTEDISKL +
Sbjct: 121 SLPRSKFPRSSLPHSKNVPDTSGALLVPPQLTGRSNIVTEDISKLFV 166

BLAST of ClCG01G007790 vs. NCBI nr
Match: gi|694327041|ref|XP_009354402.1| (PREDICTED: uncharacterized protein LOC103945545 [Pyrus x bretschneideri])

HSP 1 Score: 167.2 bits (422), Expect = 3.1e-38
Identity = 97/168 (57.74%), Postives = 116/168 (69.05%), Query Frame = 1

Query: 1   MSLVDYASSDDDVSAAEVEEVVEENRKQPENHTVAEPQSPKPEPRPQSPPINRPIVKPNQ 60
           MSLVDY+SSDDDVS  EV E  E   +Q         Q P  +PRP +    + +V   Q
Sbjct: 1   MSLVDYSSSDDDVSEEEVRENKENEPQQ---------QLPSDDPRPHT----QLVVSSYQ 60

Query: 61  QIETNEESPVPSVE-LPDASLLLNSPTSSS-LFSGSDHSSRVAAAMAANASRKRETNVLG 120
           Q E++  S  PS++ LPDAS+LLNSP SSS + SG DHSSRVAAAM  ++SRKRE N   
Sbjct: 61  QPESSAPSSAPSIQQLPDASMLLNSPVSSSNMLSGGDHSSRVAAAMVESSSRKRE-NAFA 120

Query: 121 SSLPRSKVPRSSLPHPKNVPDTSGSLLVPPQLTGRSNIVTEDISKLLI 167
           SS+PR+KVPR +LPH KNVPDT G LLVPPQL GRSNIVTED+ KL +
Sbjct: 121 SSVPRNKVPRGNLPHSKNVPDTVGGLLVPPQLRGRSNIVTEDVGKLFV 154

BLAST of ClCG01G007790 vs. NCBI nr
Match: gi|1009129761|ref|XP_015881940.1| (PREDICTED: chloride channel protein 1 [Ziziphus jujuba])

HSP 1 Score: 162.5 bits (410), Expect = 7.5e-37
Identity = 91/167 (54.49%), Postives = 114/167 (68.26%), Query Frame = 1

Query: 1   MSLVDYASSDDDVSAAEVEEVVEENRKQPENHTVAEPQSPKPEPRPQSPPINRPIVKPNQ 60
           MSLVDY SSD+D      ++V E+  ++ EN +   P    P P P      +P  +  Q
Sbjct: 1   MSLVDYTSSDED------DDVPEDLPEKQENVSDQPPTPSPPPPLPNPLHKQKPSSESYQ 60

Query: 61  QIETNEESPVPSVELPDASLLLNSPT-SSSLFSGSDHSSRVAAAMAANASRKRETNVLGS 120
           + E++     P  +LPDASLLLNSP  SS++ S +DHSS VAAAMA NASRKR++  L S
Sbjct: 61  KPESSHSKEPPIEKLPDASLLLNSPDFSSNMVSATDHSSLVAAAMAENASRKRDSKGLAS 120

Query: 121 SLPRSKVPRSSLPHPKNVPDTSGSLLVPPQLTGRSNIVTEDISKLLI 167
           SLPRSKVP+ SLPH KNVPDT G +LVPPQL+GRSN+VTEDISKL +
Sbjct: 121 SLPRSKVPKGSLPHSKNVPDTVGGMLVPPQLSGRSNVVTEDISKLFV 161

BLAST of ClCG01G007790 vs. NCBI nr
Match: gi|596027830|ref|XP_007219298.1| (hypothetical protein PRUPE_ppa018738mg, partial [Prunus persica])

HSP 1 Score: 159.5 bits (402), Expect = 6.4e-36
Identity = 89/155 (57.42%), Postives = 110/155 (70.97%), Query Frame = 1

Query: 1   MSLVDYASSDDDVSAAEVEEVVEENRKQPENHTVAEPQSPKPEPRPQSPPINRPIVKPNQ 60
           MSLVDYASSDDDVS    EE+ E    +P        Q P+ +P+P + P  + +V   Q
Sbjct: 1   MSLVDYASSDDDVS----EEIRENKENEPA-------QVPQDDPQPPTRPHTQSVVSSYQ 60

Query: 61  QIETNEESPVPSVE-LPDASLLLNSPT-SSSLFSGSDHSSRVAAAMAANASRKRETNVLG 120
           Q E+   S  PS+E LPDAS+LLNSP  SS++FSG DHSSRVAAA+A +ASRKRE+N   
Sbjct: 61  QPESTAHSSAPSIEKLPDASMLLNSPVFSSNMFSGGDHSSRVAAAIAESASRKRESNEFV 120

Query: 121 SSLPRSKVPRSSLPHPKNVPDTSGSLLVPPQLTGR 154
           SS+PRSKVP+ +LPH KNVPDT G +LVPPQL+GR
Sbjct: 121 SSVPRSKVPKGNLPHSKNVPDTIGGMLVPPQLSGR 144

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
G3MLK6_9ACAR6.4e-2751.40Uncharacterized protein OS=Amblyomma maculatum PE=2 SV=1[more]
Match NameE-valueIdentityDescription
AT5G13470.13.4e-2748.24 unknown protein[more]
Match NameE-valueIdentityDescription
gi|659072425|ref|XP_008465558.1|2.3e-7086.83PREDICTED: uncharacterized protein LOC103503186 isoform X1 [Cucumis melo][more]
gi|449452018|ref|XP_004143757.1|4.8e-6883.83PREDICTED: uncharacterized protein LOC101221543 isoform X1 [Cucumis sativus][more]
gi|694327041|ref|XP_009354402.1|3.1e-3857.74PREDICTED: uncharacterized protein LOC103945545 [Pyrus x bretschneideri][more]
gi|1009129761|ref|XP_015881940.1|7.5e-3754.49PREDICTED: chloride channel protein 1 [Ziziphus jujuba][more]
gi|596027830|ref|XP_007219298.1|6.4e-3657.42hypothetical protein PRUPE_ppa018738mg, partial [Prunus persica][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006661 phosphatidylinositol biosynthetic process
biological_process GO:0008152 metabolic process
biological_process GO:0071704 organic substance metabolic process
biological_process GO:0008150 biological_process
biological_process GO:0019637 organophosphate metabolic process
biological_process GO:0006796 phosphate-containing compound metabolic process
biological_process GO:0044238 primary metabolic process
biological_process GO:0044710 single-organism metabolic process
cellular_component GO:0005575 cellular_component
cellular_component GO:0005840 ribosome
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG01G007790.1ClCG01G007790.1mRNA


Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33912FAMILY NOT NAMEDcoord: 2..164
score: 3.2
NoneNo IPR availablePANTHERPTHR33912:SF3SUBFAMILY NOT NAMEDcoord: 2..164
score: 3.2