CsGy5G015560 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCACTTGTAGACTACGCTTCATCGGACGAAGACGTGCCGGCGGCGGTGGAGGAGGAGGAGAAGGATAATCGTAATCAGTCGGAAAACCACATCATTACAGAGCCTCACCTCCCCAAGCACGAGCCGAGGCCTCAATCTCCTCCCCTCAACCAGTAATTTTTTTACCATTTCTTTAGATTTTTTAACCCTCAAGCCGAAGAGTTCCAATTCGGATTGCTTTTTCTCTATTCCAATCGATTTTCCATCATTTTCCTCTTCTAATTTTTTCATAGCCAAATACGTTTAATCTTCGGTGTTAATTACTACTTGTTCATCCCGAAAAATCGAAGGTTTTATACTACTTCTCCTTAATTTTGTATTGTATCTTTTTTAGGGTTGTTGTTATTAGCAAAACTGGGAGGAAGGGAGATTGTTGAGTGGTTCTTTAAATATTAGCGATATTGTGCTTGTACTATTGAGTTGCTCTCTCCTTTTAGGGAATGCCTTAGCTGCTGATTCGATTGCCATGACCTTGGAACAAAATATTTGCTGTTTTTAGGTTTGGATTGTGTTAGGTCAGGTTTAATTTATTTCCTTATGATTGGCTCTGTACTCTGTAGGCCCATTGTTAAGCCAAATCAACAGTTTGAAACTAATGAGGAGTCTTCTTCTGTGCCTTGGGTTGGGCTTCCTGATGCTTCTTTACTCTTGAATTCTCCAACATCTTCTAGTCTTTTTAGTGGTAGCGATCACTCGTCTCGAGTAGCAGCGGCTATGGCTGCCAATGCATCTCGCAAGAGAGAAACAAATGTTTTAGGATCTTCTCTTCCTAGGAGTAAATTTCCAAGATCGAGCTTGCCTCACTCTAAGAATGTTCCGGATACTTCAGGGGCTTTGTTGGTTCCACCTCAGCTTACTGGAAGGTTTGTTCTAATGCATTTCCAGTTTCCCCTTATTTTCCTTTTGTTTATGCTGGTTTTTGCTTTCATTTTTTACACTGTTCCTTGAATAATAAAATAATTGGTTTGATGCATTTACATATATATATATATAATTTCTGCAGTCCGCTCTAGGTGATGAAAATCAAATCATTTCAAAATCTTTGTACATACTAATGAGTACATTGGCATAGGTAGAGTAGATTCATAAGGTACTTGTATCCTTGTGAGGTGATAGATTGAAAAAAGTTCCAATTCATTCCTCAGCTAGAAAACACAATGAATAAATAAATCATTTCATTATAGCGTATAGGACTATTAAGTATGCATGTGTGTATTCTTCTAGCCCTAAAAAATTGTAATAAGTTTATGCCCCTCCACCGACCTCTCTCTGGAGTCGTATGAAAAGCTCTGATTCTAAGTTCAGTAGACATGATCATAATAGCAATGTATTACTTACTACTAAGTTTGGTATAAGATAAGCATGGTTTGTGGACTTCTGGCTATGAATAGTCTGTAAGCCTATTTATTGTTTTTAATGAATATTAGTGTTTGAAATTTTGTTAATAAACTTGGTTCTAGTTATATTCTATGAAAGTAAATGCAGAACTATGGCTGTTGATAAACATCATTTGCTGCCTTGCAAGAACTCTGAAAATCTGATTTACTATTGCTTAAAAGTAACCGTAACTGCTTTAAGATACATTCACTGGTTTAAGTCAGAAGGAAATTTGACAATTAAACAGCGCTATGATATCACCTTAAGAAGCAAACACTAGTAGTGTGAAAACTCAAGCTCAAGCTCGCGCGTTTTTTATTCAGTTTAGAAGTTTGAAATATATGATTTTAGGTGAATTCCTATTGCAATTTTGCACCTAAAATTTATTATTTTATTTATTCTGATAGCTATTCTGCATCTTTGGCAGGAGTAACATTGTCACCGAAGATATAAGCAAGCTGTTCGTGAAGAAGTCAGCCAAACCACCCTTGTAA ATGTCACTTGTAGACTACGCTTCATCGGACGAAGACGTGCCGGCGGCGGTGGAGGAGGAGGAGAAGGATAATCGTAATCAGTCGGAAAACCACATCATTACAGAGCCTCACCTCCCCAAGCACGAGCCGAGGCCTCAATCTCCTCCCCTCAACCAGCCCATTGTTAAGCCAAATCAACAGTTTGAAACTAATGAGGAGTCTTCTTCTGTGCCTTGGGTTGGGCTTCCTGATGCTTCTTTACTCTTGAATTCTCCAACATCTTCTAGTCTTTTTAGTGGTAGCGATCACTCGTCTCGAGTAGCAGCGGCTATGGCTGCCAATGCATCTCGCAAGAGAGAAACAAATGTTTTAGGATCTTCTCTTCCTAGGAGTAAATTTCCAAGATCGAGCTTGCCTCACTCTAAGAATGTTCCGGATACTTCAGGGGCTTTGTTGGTTCCACCTCAGCTTACTGGAAGGAGTAACATTGTCACCGAAGATATAAGCAAGCTGTTCGTGAAGAAGTCAGCCAAACCACCCTTGTAA ATGTCACTTGTAGACTACGCTTCATCGGACGAAGACGTGCCGGCGGCGGTGGAGGAGGAGGAGAAGGATAATCGTAATCAGTCGGAAAACCACATCATTACAGAGCCTCACCTCCCCAAGCACGAGCCGAGGCCTCAATCTCCTCCCCTCAACCAGCCCATTGTTAAGCCAAATCAACAGTTTGAAACTAATGAGGAGTCTTCTTCTGTGCCTTGGGTTGGGCTTCCTGATGCTTCTTTACTCTTGAATTCTCCAACATCTTCTAGTCTTTTTAGTGGTAGCGATCACTCGTCTCGAGTAGCAGCGGCTATGGCTGCCAATGCATCTCGCAAGAGAGAAACAAATGTTTTAGGATCTTCTCTTCCTAGGAGTAAATTTCCAAGATCGAGCTTGCCTCACTCTAAGAATGTTCCGGATACTTCAGGGGCTTTGTTGGTTCCACCTCAGCTTACTGGAAGGAGTAACATTGTCACCGAAGATATAAGCAAGCTGTTCGTGAAGAAGTCAGCCAAACCACCCTTGTAA MSLVDYASSDEDVPAAVEEEEKDNRNQSENHIITEPHLPKHEPRPQSPPLNQPIVKPNQQFETNEESSSVPWVGLPDASLLLNSPTSSSLFSGSDHSSRVAAAMAANASRKRETNVLGSSLPRSKFPRSSLPHSKNVPDTSGALLVPPQLTGRSNIVTEDISKLFVKKSAKPPL
BLAST of CsGy5G015560 vs. NCBI nr
Match: XP_004143757.1 (PREDICTED: uncharacterized protein LOC101221543 isoform X1 [Cucumis sativus] >XP_011655268.1 PREDICTED: uncharacterized protein LOC101221543 isoform X2 [Cucumis sativus] >KGN51124.1 hypothetical protein Csa_5G457750 [Cucumis sativus]) HSP 1 Score: 318.5 bits (815), Expect = 1.4e-83 Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 0
BLAST of CsGy5G015560 vs. NCBI nr
Match: XP_008465558.1 (PREDICTED: uncharacterized protein LOC103503186 [Cucumis melo]) HSP 1 Score: 285.0 bits (728), Expect = 1.7e-73 Identity = 158/173 (91.33%), Postives = 163/173 (94.22%), Query Frame = 0
BLAST of CsGy5G015560 vs. NCBI nr
Match: XP_022990875.1 (uncharacterized protein LOC111487632 isoform X1 [Cucurbita maxima]) HSP 1 Score: 189.9 bits (481), Expect = 7.3e-45 Identity = 114/138 (82.61%), Postives = 118/138 (85.51%), Query Frame = 0
BLAST of CsGy5G015560 vs. NCBI nr
Match: XP_022964179.1 (uncharacterized protein LOC111464275 isoform X1 [Cucurbita moschata]) HSP 1 Score: 186.8 bits (473), Expect = 6.2e-44 Identity = 113/138 (81.88%), Postives = 117/138 (84.78%), Query Frame = 0
BLAST of CsGy5G015560 vs. NCBI nr
Match: XP_023517928.1 (uncharacterized protein LOC111781514 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 186.4 bits (472), Expect = 8.1e-44 Identity = 120/172 (69.77%), Postives = 124/172 (72.09%), Query Frame = 0
BLAST of CsGy5G015560 vs. TAIR10
Match: AT5G13470.1 (unknown protein) HSP 1 Score: 101.3 bits (251), Expect = 6.2e-22 Identity = 82/171 (47.95%), Postives = 101/171 (59.06%), Query Frame = 0
BLAST of CsGy5G015560 vs. TrEMBL
Match: tr|A0A0A0KQH2|A0A0A0KQH2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G457750 PE=4 SV=1) HSP 1 Score: 318.5 bits (815), Expect = 9.0e-84 Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 0
BLAST of CsGy5G015560 vs. TrEMBL
Match: tr|A0A1S3CP27|A0A1S3CP27_CUCME (uncharacterized protein LOC103503186 OS=Cucumis melo OX=3656 GN=LOC103503186 PE=4 SV=1) HSP 1 Score: 285.0 bits (728), Expect = 1.1e-73 Identity = 158/173 (91.33%), Postives = 163/173 (94.22%), Query Frame = 0
BLAST of CsGy5G015560 vs. TrEMBL
Match: tr|A0A2I4GSW0|A0A2I4GSW0_9ROSI (uncharacterized protein LOC109010573 OS=Juglans regia OX=51240 GN=LOC109010573 PE=4 SV=1) HSP 1 Score: 141.0 bits (354), Expect = 2.6e-30 Identity = 97/177 (54.80%), Postives = 115/177 (64.97%), Query Frame = 0
BLAST of CsGy5G015560 vs. TrEMBL
Match: tr|A0A2P4HFK0|A0A2P4HFK0_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_26637 PE=4 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 9.2e-28 Identity = 75/115 (65.22%), Postives = 86/115 (74.78%), Query Frame = 0
BLAST of CsGy5G015560 vs. TrEMBL
Match: tr|K4AYK4|K4AYK4_SOLLC (Uncharacterized protein OS=Solanum lycopersicum OX=4081 GN=101263846 PE=4 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 1.0e-26 Identity = 90/181 (49.72%), Postives = 113/181 (62.43%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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