MELO3C004891.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C004891.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	50S ribosomal protein L19, chloroplastic
Location	chr12 : 7681250 .. 7686412 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAACCATTTCATAAAATCAAAAGAACTCTTTCATCATCTTCTTCGTCTTCATCTTCACGCCGTCTCCTCCTCTGTTTCAGCAGATTGGTTTCGCCGCCGCCGTCGTCTCTCTTAAACTTGTGCCACCTAACCCTCTTTCCCAGCGGTTTTGCACTGATTTCTTACTCCTTTGTTGTGACTGGTATTCTCGTAATCTTCATCTACGTCTTTTTTCACTTGAAAACACATGAGTTTGGACTTGTCTAATGAAACAATGGAGGAGTTTTTTCACTTTTTTTTATTAACAAAATTGAAACGTGGTTTGTATTTGGCTGATCTTATTCGGACGTGAATCAATCGTCCAGTGCTCTACTCTTTTTTTTTCTTTTCTGGTTTCGTTTTAATCTGACATTTCCAGAAATCTTGATCAGTGCAATGTATATTTAAGCTACATTATTTATACGCTGCTTCACTTCCATCATGTTTCCTCTAACCTGCTTGTTTTGTAACAATTCTATGGATATTGTTTTATATTACTCAACGGTCATGAAGTTTCTGTGTATAATAATGCAGCTGGAAATCTTGTGCGAAAATGCAAGGTTTTCGCAGAATTAATCAATTGGTGCGAAGGCAAAGTCCTGATGCACATTTCAAATTGATTAGAGGTTATCCTCTGAATGGGGATGCTAGCTGTAGCTGCTCGGCCCCAATGTTGATGGAAAACAGTTTTACTATTCCTTGTCTTTTTGGGAAGTCATATGGGTCTTTGAGTGGTTCCCTCTGGAGGTCTTTCTCGTGGTCGGGCAATCAATATCCGGAAGCATTCGTATGTATTTCTGTTCGTTTAACTATCTTTCATCTTATGGTCGATTACTAGTATGTTTCATTCTTGTGTTGTTTTTGAAGGTTCTATAACTATTCAGTCAATTCACTTTGGTTTATACTGCATATATAATTAATGACATTTAGTCTAGTTCAAATTGCAAGCTTTTATGAATTCATTTGTGCTTAATGTTTTAGTTCATAAGTAGTGTGACAAGTTAATCTCGTGATATCGGTATTGGCCAACACTTGATTGGTGGTAGGGGAGAGGGTAATATGTATAGTATATGATCAATTATGTATGTTATGAACATGCCTCTAATACTGACCAGACTTGATGTGTGCCGAACGTCTGTTAGACCACCTATTGTTTTACAATACAGTAGAAGGGGAAAGAAGGGAATAGCATGTGTCAAAGGGGACCACAATGGGACCCAAGTTAATTAGAGTTTTATTTATTGTAATTAGATGTTCAAAACGGGAGGGAAAGTTAGATATCTTTAGATTAGAATTTCTGTTTCATCCTTGAGAGAAAGGATAACAGAGAGGAGGGAGTTTATTCTTGATTTCTCGAATTGATTTCTCCATCAATTCGATTTCGTTCCATTTCTGTTCTTGTAATTCCTCTAATACCTATATCGAATAAGAACATTCTTTTTCAATCTTCATCTTCCATTTTCGGGCTCCATCAACGTCTTATTCTATAAAGTAACATAGAGCGTGAATATATGAGCTAGAACTGGCTCTTGAATTTAATTATGGATCTGAGCCATTTGGTGTACCTGTGGGAGTGCCTGCTCACGAACTACCTTTCAGGTGGCAATTCTTTTTGGGGGGCTTAGTGGGGGGATGGGTGTTCGTTGTTGGAGGGAAAGTGATTTTGGATTCCCCTTTTCGGTAGAAAAGTGTTGTGGTAAGCAAGCTTCTATGCTATTTTGTGGAGTATTTGGTTGGAGTGAAATAGTAGAGTTTTTAGGGATGTGGAGAAATCTAGAGAGGAAGTTTGGTTTTTGGTGAGGACTGAGGTCTAATGCTTCCATTTGAGTTTCAGTCACTAGATTGTTTTGTAATTACGATATTGATCTTGTTCTCTTGGATTGGATTATTTTTGGAGTTAGCGTTGCTCTCTTGTTTCTCAGGAGCTTTTTTTTTCCTTTTATTCCTTTATTTTTTCAATGTAAGGTTTTTGTGTCAAAAAAATAAAATAAAAAACCATAAACTTCACAAATGTTGTCCTGTCTCAGACTCTTATTTATTATGTATCCTATTTTCCTCTCAACATAATAAGTGTAGAGAACCACCTATTTAGCTTGCATCAAGCTGATGTAACTTTTCTAGGAAAACAATGTGGTTATAGTCCTTTTCTTCTATGATCCTTGATAATTGGTGCCTTTCTGTAATTTCCTTGGCATTTATGTAGATTGGTTATCTTCCTCTTATCTACCTCTTTTCTTTCAATGTTGCTGAAAATTAGAAAAAACTGTCAACTATCCTCATGAGAAATTTTTTCAGAAACTGTGTTTATGGGTACTCGTTGAGGAAGACCATACATGAATGTTTTCTTTCAATGTTGCTGAAACTTAGCTTGCTATTGGTTTTTGGGTACTTATTGGAAGCAATATCTATTCATTAAGAGTCTATTTTGTAACGTATGACTTAGTAACAATTTATATCAATATTTAGCAGAAAAATATGAGCTCTCAAATGGAATTTGTGGCTTTGAGAAAACATGCATCTTCAACTTTTTCAGTAATCCAAAGTTCTAGGCCACATTTTTTTCAGTTGGCAGAAATTGCAGCTCCTTTTTCTAGTAGGGGCATTGCTACGACAAGCTCGATGGGATCAGCTCTACTGGGATCCCCTGCAGTTGATTCTGTTATACCCCCTCGCATCAAATTTAAGAGACTTGATAAAACGTCAAGACACATAATGCAGGTATTCACATTTCTGAGTATTGTTGGAAAAGAAGTACTTTCATTTCATCTTCCCTTCTGTCTGCTTTCAATATATTATTTTCTTCTACTCACAGATTTTAGACAAGGAAGCTGTTGAGGAGGTAAAAGCACATAGAGAAATTCCAGATATAAAGCCAGGCTATATTGTGCAGCTCAAAGTGGTAGAGTTCATTACTTGCATTCTTCCTTCTTTTTTTTTTTTTCTCTATGAAAGTCGTTGTCTATATAAAAAAGGGGTATAGTTCATTTGAGTCAAATCATATCATGTTGTTTCATTACTTGCAGACGGTTTTTATTCCTAAAGGCAGTTGTAGATGAGTTTATCAAACAGATTTTGGCTTTTGTTGTCAGATGATTTTATCGAACAGCTTTTGGCTTTTGAACAGGAAGTACCTGAGAACAAGCGACGTATCTCAACATTGAAAGGTATCGTGATAGCCAGACGAAATGCCGGTCTAAACTCAACTTTTAGAATAAGGAGGGTAGTTGCTGGTGTTGGGATCGAATCCCTCTTCCCTCTGTAAGTATTACTGATTTTTTGCTATAATTATTTTCTGCAAAATTTACGTTCCCAATTTCATCGTCTTTGTCCCTGCTCACGTTTGTGATGAAGAACAGAAGAATTGTGTATCTGGGAAAAAGGACCCGGATACATCTAGACATTCAACGGACACGTATCTGGGACACTAAAAAATGTGTCAAGATTATTATTATTATTATTATCCTAATTTTGGACAAGTCTTTCAAAAGTATTTAACCTAAAAATGGGGGGTGGTAGACTTTATCCATAAATAATGAATTATTGACCCATCCTAAGTTATTAGGACGACTTTTTCTCTCTGGTCACTGCCAACTAAACTTTCTGTATCTTTTAAATTTTCAATATCATTAAATGACTTAACTTTTTATGTTTTTATGATAAATTTAGGTATATTGTCTATTAAGAAGTGTCAATACTTCACGTATTTTATTTTAAAAAACGTGTCTGCAACATGTATATGTTCTATTTTTTAGAAATTGACATGTCTTTGTGTTTCTTAAGAATTTAATACAAATCATTAAACTTAAGGTGCAAATCTTTATGAATTTGAGTCTTCATTAAATTCGGAGAGAAATTGAGCCGGACGGATTTGGTGGGAGGGGTGTTCACATGTCAAGTTTGAAAGTTCGTGTACATATTTCATATAAATATATAGGCCACTAGGTCTATGAGTTGGTCTATTCAATGTAGAATATAGTATTCTAAAAACTATTTCCTAAACTTTAGTATTCTATGAATTACCTTGGCAATTAAATGTCGTGGAGTGGAGATATTTTGTGAGAATAGTTGAAATGTGTGCAAGCTAGTTTGACCACTTGCTAATACAATTTAAAAAAAAAAAATTTACTGGTACAAGAGGGTGTTATCAGTTCGGTTTGGCTCAGCTTGAGTGTCAAACTGAAGCCGAACCACTAGAATTTTTGAAGAAATTGAAGAACTGCGTGGAACTGCTAAAAGATATTCACCGAACCGATTACTAACGGTATGCTTGGTTTGGCCCACCGGTTCCCATCTCTTTAGTGAAGTTTGGTCTCCAAGCGAATCGCAAGTTCACTTTGCTCTAGGCTCTAGCCAAACTCGGAACCGATCAATTATAATTGGTTTTTTAAACTGGAAACAAAGTCATCCATCGATCCAAACCGATATTAAAGTGAACTGACAGTGGTTTCAGTCAGTTTATTTTGGCTTTTAGGGATTTCGGTTTCCCCTTCACCCCTAGATACAAGTAAAATGTATATGGTGATTGGTGAACAATACTTATTAAAGGTTATGTATTAATATGAATATATATATGTATGGTCTTTCTCTATATGGTTGTTTCTTTAAATGATACTCGCCTCTGATAGCTTTGTGCTTCTGACTAAAATAAGTGGTTTGTGCATGGCAGATACTCACCGAACATAAAAGAGATTAAGGTGTTGGAGAAGAAGAAAGTGCGCAGGGCTAAGCTTTACTATCTTAGGGACAAAATGAACGCGCTTAAGAAGCAGTAGCAAGTTTTCTTTTCAATGGGATCAGAAGTGTTCCGTAACATGGTGCGTTTAAATCCTTTTGAGCGAAAAATCTCACGAGCTTTCACGATTATTTTATCCTGTTTTATGCATGGAGGGTATAAGAAATTAGTGGAGCTAAAATAAGAATAAAAAAATTGACTTCGCGGTGATTGCCTCGAGTAGAAAATGTTCTTTCTTTTATATGATTAGTTGCTCAAGCAAACCGTGTCATCATTTATCTTTTTGTTGGTCGGTTGCCTGATTTTTCCCCTTCTTTGAAATGCCAAAGAGCTTGCTGTTTGTAATATATGGCTGATGAATATTATCATCTTTCTGAATGAAGGATATATTTATTACTTCTTCCCCTTCTTTC

mRNA sequence

AAACCATTTCATAAAATCAAAAGAACTCTTTCATCATCTTCTTCGTCTTCATCTTCACGCCGTCTCCTCCTCTGTTTCAGCAGATTGGTTTCGCCGCCGCCGTCGTCTCTCTTAAACTTGTGCCACCTAACCCTCTTTCCCAGCGGTTTTGCACTGATTTCTTACTCCTTTGTTGTGACTGCTGGAAATCTTGTGCGAAAATGCAAGGTTTTCGCAGAATTAATCAATTGGTGCGAAGGCAAAGTCCTGATGCACATTTCAAATTGATTAGAGGTTATCCTCTGAATGGGGATGCTAGCTGTAGCTGCTCGGCCCCAATGTTGATGGAAAACAGTTTTACTATTCCTTGTCTTTTTGGGAAGTCATATGGGTCTTTGAGTGGTTCCCTCTGGAGGTCTTTCTCGTGGTCGGGCAATCAATATCCGGAAGCATTCCAGAAAAATATGAGCTCTCAAATGGAATTTGTGGCTTTGAGAAAACATGCATCTTCAACTTTTTCAGTAATCCAAAGTTCTAGGCCACATTTTTTTCAGTTGGCAGAAATTGCAGCTCCTTTTTCTAGTAGGGGCATTGCTACGACAAGCTCGATGGGATCAGCTCTACTGGGATCCCCTGCAGTTGATTCTGTTATACCCCCTCGCATCAAATTTAAGAGACTTGATAAAACGTCAAGACACATAATGCAGATTTTAGACAAGGAAGCTGTTGAGGAGGTAAAAGCACATAGAGAAATTCCAGATATAAAGCCAGGCTATATTGTGCAGCTCAAAGTGGAAGTACCTGAGAACAAGCGACGTATCTCAACATTGAAAGGTATCGTGATAGCCAGACGAAATGCCGGTCTAAACTCAACTTTTAGAATAAGGAGGGTAGTTGCTGGTGTTGGGATCGAATCCCTCTTCCCTCTATACTCACCGAACATAAAAGAGATTAAGGTGTTGGAGAAGAAGAAAGTGCGCAGGGCTAAGCTTTACTATCTTAGGGACAAAATGAACGCGCTTAAGAAGCAGTAGCAAGTTTTCTTTTCAATGGGATCAGAAGTGTTCCGTAACATGGTGCGTTTAAATCCTTTTGAGCGAAAAATCTCACGAGCTTTCACGATTATTTTATCCTGTTTTATGCATGGAGGGTATAAGAAATTAGTGGAGCTAAAATAAGAATAAAAAAATTGACTTCGCGGTGATTGCCTCGAGTAGAAAATGTTCTTTCTTTTATATGATTAGTTGCTCAAGCAAACCGTGTCATCATTTATCTTTTTGTTGGTCGGTTGCCTGATTTTTCCCCTTCTTTGAAATGCCAAAGAGCTTGCTGTTTGTAATATATGGCTGATGAATATTATCATCTTTCTGAATGAAGGATATATTTATTACTTCTTCCCCTTCTTTC

Coding sequence (CDS)

ATGCAAGGTTTTCGCAGAATTAATCAATTGGTGCGAAGGCAAAGTCCTGATGCACATTTCAAATTGATTAGAGGTTATCCTCTGAATGGGGATGCTAGCTGTAGCTGCTCGGCCCCAATGTTGATGGAAAACAGTTTTACTATTCCTTGTCTTTTTGGGAAGTCATATGGGTCTTTGAGTGGTTCCCTCTGGAGGTCTTTCTCGTGGTCGGGCAATCAATATCCGGAAGCATTCCAGAAAAATATGAGCTCTCAAATGGAATTTGTGGCTTTGAGAAAACATGCATCTTCAACTTTTTCAGTAATCCAAAGTTCTAGGCCACATTTTTTTCAGTTGGCAGAAATTGCAGCTCCTTTTTCTAGTAGGGGCATTGCTACGACAAGCTCGATGGGATCAGCTCTACTGGGATCCCCTGCAGTTGATTCTGTTATACCCCCTCGCATCAAATTTAAGAGACTTGATAAAACGTCAAGACACATAATGCAGATTTTAGACAAGGAAGCTGTTGAGGAGGTAAAAGCACATAGAGAAATTCCAGATATAAAGCCAGGCTATATTGTGCAGCTCAAAGTGGAAGTACCTGAGAACAAGCGACGTATCTCAACATTGAAAGGTATCGTGATAGCCAGACGAAATGCCGGTCTAAACTCAACTTTTAGAATAAGGAGGGTAGTTGCTGGTGTTGGGATCGAATCCCTCTTCCCTCTATACTCACCGAACATAAAAGAGATTAAGGTGTTGGAGAAGAAGAAAGTGCGCAGGGCTAAGCTTTACTATCTTAGGGACAAAATGAACGCGCTTAAGAAGCAGTAG

Protein sequence

MQGFRRINQLVRRQSPDAHFKLIRGYPLNGDASCSCSAPMLMENSFTIPCLFGKSYGSLSGSLWRSFSWSGNQYPEAFQKNMSSQMEFVALRKHASSTFSVIQSSRPHFFQLAEIAAPFSSRGIATTSSMGSALLGSPAVDSVIPPRIKFKRLDKTSRHIMQILDKEAVEEVKAHREIPDIKPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNSTFRIRRVVAGVGIESLFPLYSPNIKEIKVLEKKKVRRAKLYYLRDKMNALKKQ

Homology

[Close]

BLAST of MELO3C004891.2 vs. NCBI nr
Match: XP_008462626.1 (PREDICTED: 50S ribosomal protein L19-2, chloroplastic-like isoform X1 [Cucumis melo])

HSP 1 Score: 524.2 bits (1349), Expect = 2.5e-145
Identity = 270/270 (100.00%), Postives = 270/270 (100.00%), Query Frame = 0


Query: 1   MQGFRRINQLVRRQSPDAHFKLIRGYPLNGDASCSCSAPMLMENSFTIPCLFGKSYGSLS 60
           MQGFRRINQLVRRQSPDAHFKLIRGYPLNGDASCSCSAPMLMENSFTIPCLFGKSYGSLS
Sbjct: 1   MQGFRRINQLVRRQSPDAHFKLIRGYPLNGDASCSCSAPMLMENSFTIPCLFGKSYGSLS 60

Query: 61  GSLWRSFSWSGNQYPEAFQKNMSSQMEFVALRKHASSTFSVIQSSRPHFFQLAEIAAPFS 120
           GSLWRSFSWSGNQYPEAFQKNMSSQMEFVALRKHASSTFSVIQSSRPHFFQLAEIAAPFS
Sbjct: 61  GSLWRSFSWSGNQYPEAFQKNMSSQMEFVALRKHASSTFSVIQSSRPHFFQLAEIAAPFS 120

Query: 121 SRGIATTSSMGSALLGSPAVDSVIPPRIKFKRLDKTSRHIMQILDKEAVEEVKAHREIPD 180
           SRGIATTSSMGSALLGSPAVDSVIPPRIKFKRLDKTSRHIMQILDKEAVEEVKAHREIPD
Sbjct: 121 SRGIATTSSMGSALLGSPAVDSVIPPRIKFKRLDKTSRHIMQILDKEAVEEVKAHREIPD 180

Query: 181 IKPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNSTFRIRRVVAGVGIESLFPLYSPN 240
           IKPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNSTFRIRRVVAGVGIESLFPLYSPN
Sbjct: 181 IKPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNSTFRIRRVVAGVGIESLFPLYSPN 240

Query: 241 IKEIKVLEKKKVRRAKLYYLRDKMNALKKQ 271
           IKEIKVLEKKKVRRAKLYYLRDKMNALKKQ
Sbjct: 241 IKEIKVLEKKKVRRAKLYYLRDKMNALKKQ 270

[Close]

BLAST of MELO3C004891.2 vs. NCBI nr
Match: XP_008462635.1 (PREDICTED: 50S ribosomal protein L19-2, chloroplastic-like isoform X2 [Cucumis melo])

HSP 1 Score: 517.7 bits (1332), Expect = 2.4e-143
Identity = 269/270 (99.63%), Postives = 269/270 (99.63%), Query Frame = 0


Query: 1   MQGFRRINQLVRRQSPDAHFKLIRGYPLNGDASCSCSAPMLMENSFTIPCLFGKSYGSLS 60
           MQGFRRINQLVRRQSPDAHFKLIRGYPLNGDASCSCSAPMLMENSFTIPCLFGKSYGSLS
Sbjct: 1   MQGFRRINQLVRRQSPDAHFKLIRGYPLNGDASCSCSAPMLMENSFTIPCLFGKSYGSLS 60

Query: 61  GSLWRSFSWSGNQYPEAFQKNMSSQMEFVALRKHASSTFSVIQSSRPHFFQLAEIAAPFS 120
           GSLWRSFSWSGNQYPEAF KNMSSQMEFVALRKHASSTFSVIQSSRPHFFQLAEIAAPFS
Sbjct: 61  GSLWRSFSWSGNQYPEAF-KNMSSQMEFVALRKHASSTFSVIQSSRPHFFQLAEIAAPFS 120

Query: 121 SRGIATTSSMGSALLGSPAVDSVIPPRIKFKRLDKTSRHIMQILDKEAVEEVKAHREIPD 180
           SRGIATTSSMGSALLGSPAVDSVIPPRIKFKRLDKTSRHIMQILDKEAVEEVKAHREIPD
Sbjct: 121 SRGIATTSSMGSALLGSPAVDSVIPPRIKFKRLDKTSRHIMQILDKEAVEEVKAHREIPD 180

Query: 181 IKPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNSTFRIRRVVAGVGIESLFPLYSPN 240
           IKPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNSTFRIRRVVAGVGIESLFPLYSPN
Sbjct: 181 IKPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNSTFRIRRVVAGVGIESLFPLYSPN 240

Query: 241 IKEIKVLEKKKVRRAKLYYLRDKMNALKKQ 271
           IKEIKVLEKKKVRRAKLYYLRDKMNALKKQ
Sbjct: 241 IKEIKVLEKKKVRRAKLYYLRDKMNALKKQ 269

[Close]

BLAST of MELO3C004891.2 vs. NCBI nr
Match: XP_011654038.1 (PREDICTED: 50S ribosomal protein L19-2, chloroplastic isoform X1 [Cucumis sativus] >XP_011654046.1 PREDICTED: 50S ribosomal protein L19-2, chloroplastic isoform X1 [Cucumis sativus])

HSP 1 Score: 475.3 bits (1222), Expect = 1.4e-130
Identity = 253/270 (93.70%), Postives = 254/270 (94.07%), Query Frame = 0


Query: 1   MQGFRRINQLVRRQSPDAHFKLIRGYPLNGDASCSCSAPMLMENSFTIPCLFGKSYGSLS 60
           MQGFRRINQLVRRQ PDA+FKLIRGYPLNGDA CSCSAPM MENSFTIP LFGKSYGSL 
Sbjct: 1   MQGFRRINQLVRRQIPDANFKLIRGYPLNGDAGCSCSAPMSMENSFTIPYLFGKSYGSLC 60

Query: 61  GSLWRSFSWSGNQYPEAFQKNMSSQMEFVALRKHASSTFSVIQSSRPHFFQLAEIAAPFS 120
           GS  RSFS SGNQYPEAF KNMSSQMEFV LRKHASSTFS  QSSRPHFFQLAE AAPFS
Sbjct: 61  GSFLRSFSRSGNQYPEAF-KNMSSQMEFVPLRKHASSTFSAFQSSRPHFFQLAETAAPFS 120

Query: 121 SRGIATTSSMGSALLGSPAVDSVIPPRIKFKRLDKTSRHIMQILDKEAVEEVKAHREIPD 180
           SRGIATTSSM SAL GSPAVDSVIPPRIKFKRLDKTSRHIMQILDKEAVEEVKA REIPD
Sbjct: 121 SRGIATTSSMESALQGSPAVDSVIPPRIKFKRLDKTSRHIMQILDKEAVEEVKARREIPD 180

Query: 181 IKPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNSTFRIRRVVAGVGIESLFPLYSPN 240
           IKPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNSTFRIRRVVAGVGIESLFPLYSPN
Sbjct: 181 IKPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNSTFRIRRVVAGVGIESLFPLYSPN 240

Query: 241 IKEIKVLEKKKVRRAKLYYLRDKMNALKKQ 271
           IKEIKVLEKKKVRRAKLYYLRDKMNALKKQ
Sbjct: 241 IKEIKVLEKKKVRRAKLYYLRDKMNALKKQ 269

[Close]

BLAST of MELO3C004891.2 vs. NCBI nr
Match: KGN64844.1 (hypothetical protein Csa_1G126060 [Cucumis sativus])

HSP 1 Score: 475.3 bits (1222), Expect = 1.4e-130
Identity = 253/270 (93.70%), Postives = 254/270 (94.07%), Query Frame = 0


Query: 1   MQGFRRINQLVRRQSPDAHFKLIRGYPLNGDASCSCSAPMLMENSFTIPCLFGKSYGSLS 60
           MQGFRRINQLVRRQ PDA+FKLIRGYPLNGDA CSCSAPM MENSFTIP LFGKSYGSL 
Sbjct: 138 MQGFRRINQLVRRQIPDANFKLIRGYPLNGDAGCSCSAPMSMENSFTIPYLFGKSYGSLC 197

Query: 61  GSLWRSFSWSGNQYPEAFQKNMSSQMEFVALRKHASSTFSVIQSSRPHFFQLAEIAAPFS 120
           GS  RSFS SGNQYPEAF KNMSSQMEFV LRKHASSTFS  QSSRPHFFQLAE AAPFS
Sbjct: 198 GSFLRSFSRSGNQYPEAF-KNMSSQMEFVPLRKHASSTFSAFQSSRPHFFQLAETAAPFS 257

Query: 121 SRGIATTSSMGSALLGSPAVDSVIPPRIKFKRLDKTSRHIMQILDKEAVEEVKAHREIPD 180
           SRGIATTSSM SAL GSPAVDSVIPPRIKFKRLDKTSRHIMQILDKEAVEEVKA REIPD
Sbjct: 258 SRGIATTSSMESALQGSPAVDSVIPPRIKFKRLDKTSRHIMQILDKEAVEEVKARREIPD 317

Query: 181 IKPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNSTFRIRRVVAGVGIESLFPLYSPN 240
           IKPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNSTFRIRRVVAGVGIESLFPLYSPN
Sbjct: 318 IKPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNSTFRIRRVVAGVGIESLFPLYSPN 377

Query: 241 IKEIKVLEKKKVRRAKLYYLRDKMNALKKQ 271
           IKEIKVLEKKKVRRAKLYYLRDKMNALKKQ
Sbjct: 378 IKEIKVLEKKKVRRAKLYYLRDKMNALKKQ 406

[Close]

BLAST of MELO3C004891.2 vs. NCBI nr
Match: XP_008462642.1 (PREDICTED: 50S ribosomal protein L19, chloroplastic-like isoform X3 [Cucumis melo])

HSP 1 Score: 445.3 bits (1144), Expect = 1.5e-121
Identity = 237/270 (87.78%), Postives = 237/270 (87.78%), Query Frame = 0


Query: 1   MQGFRRINQLVRRQSPDAHFKLIRGYPLNGDASCSCSAPMLMENSFTIPCLFGKSYGSLS 60
           MQGFRRINQLVRRQSPDAHFKLIRGYPLNGDASCSCSAPMLMENSFTIPCLFGKSYGSLS
Sbjct: 1   MQGFRRINQLVRRQSPDAHFKLIRGYPLNGDASCSCSAPMLMENSFTIPCLFGKSYGSLS 60

Query: 61  GSLWRSFSWSGNQYPEAFQKNMSSQMEFVALRKHASSTFSVIQSSRPHFFQLAEIAAPFS 120
           GSLWRSFSWSGNQYPEAF                                 LAEIAAPFS
Sbjct: 61  GSLWRSFSWSGNQYPEAF---------------------------------LAEIAAPFS 120

Query: 121 SRGIATTSSMGSALLGSPAVDSVIPPRIKFKRLDKTSRHIMQILDKEAVEEVKAHREIPD 180
           SRGIATTSSMGSALLGSPAVDSVIPPRIKFKRLDKTSRHIMQILDKEAVEEVKAHREIPD
Sbjct: 121 SRGIATTSSMGSALLGSPAVDSVIPPRIKFKRLDKTSRHIMQILDKEAVEEVKAHREIPD 180

Query: 181 IKPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNSTFRIRRVVAGVGIESLFPLYSPN 240
           IKPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNSTFRIRRVVAGVGIESLFPLYSPN
Sbjct: 181 IKPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNSTFRIRRVVAGVGIESLFPLYSPN 237

Query: 241 IKEIKVLEKKKVRRAKLYYLRDKMNALKKQ 271
           IKEIKVLEKKKVRRAKLYYLRDKMNALKKQ
Sbjct: 241 IKEIKVLEKKKVRRAKLYYLRDKMNALKKQ 237

[Close]

BLAST of MELO3C004891.2 vs. TAIR10
Match: AT1G24240.1 (Ribosomal protein L19 family protein)

HSP 1 Score: 226.5 bits (576), Expect = 2.0e-59
Identity = 125/203 (61.58%), Postives = 155/203 (76.35%), Query Frame = 0


Query: 68  SWSGNQYPEAFQKNMSSQMEFVALRKHASSTFSVIQSSRPHFFQLAEIAAP-FSSRGIAT 127
           SWS N+         S ++ F +     ++T+ +       F  LA +    FSSR  +T
Sbjct: 31  SWSANE---------SRKLGFDSFPSTRAATYLISSLKNAGFSSLAVVPKQNFSSRCFST 90

Query: 128 TSSMGSALLGSPAVDSVIPPRIKFKRLDKTSRHIMQILDKEAVEEVKAHREIPDIKPGYI 187
           T   G ++ GSP  D V+P RIKFKRLDKT++HIMQI+DKEAVEEV+  REIP+IKPGYI
Sbjct: 91  T---GDSVQGSPESDCVVPQRIKFKRLDKTAKHIMQIVDKEAVEEVRTLREIPEIKPGYI 150

Query: 188 VQLKVEVPENKRRISTLKGIVIARRNAGLNSTFRIRRVVAGVGIESLFPLYSPNIKEIKV 247
           VQLKVEVPENKRR+S +KG+VIARRNAGLNSTFRIRR+VAGVG+ES+FPLYSPN++ IKV
Sbjct: 151 VQLKVEVPENKRRVSIVKGVVIARRNAGLNSTFRIRRLVAGVGVESMFPLYSPNLRVIKV 210

Query: 248 LEKKKVRRAKLYYLRDKMNALKK 270
           ++KKKVRRAKLYYLR+K+NALKK
Sbjct: 211 VDKKKVRRAKLYYLREKVNALKK 221

[Close]

BLAST of MELO3C004891.2 vs. TAIR10
Match: AT4G11630.1 (Ribosomal protein L19 family protein)

HSP 1 Score: 224.6 bits (571), Expect = 7.6e-59
Identity = 123/196 (62.76%), Postives = 158/196 (80.61%), Query Frame = 0


Query: 77  AFQKNMSSQMEFVALRKHASSTFSVIQSSRPHFFQLAEIAA---PFSSRGIATTSSMGSA 136
           ++ +N S ++ F +     ++T+ +I S +   F  + I      ++SR  +TT    S+
Sbjct: 32  SWSENESRKLGFDSCPSSRAATY-LISSLKNAGFSSSAIPKQNFTYASRCFSTTGD--SS 91

Query: 137 LLGSPAVDSVIPPRIKFKRLDKTSRHIMQILDKEAVEEVKAHREIPDIKPGYIVQLKVEV 196
           + GSP  D V+P RIKFKRLDKT++HIMQI+DKEAVEEV++ REIP+IKPGYIVQLKVEV
Sbjct: 92  VQGSPESDCVVPQRIKFKRLDKTAKHIMQIVDKEAVEEVRSLREIPEIKPGYIVQLKVEV 151

Query: 197 PENKRRISTLKGIVIARRNAGLNSTFRIRRVVAGVGIESLFPLYSPNIKEIKVLEKKKVR 256
           PENKRR+S +KG+VIARRNAGLNSTFRIRR+VAGVG+ES+FPLYSPN++EIKV++KKKVR
Sbjct: 152 PENKRRVSIVKGVVIARRNAGLNSTFRIRRLVAGVGVESMFPLYSPNLREIKVVDKKKVR 211

Query: 257 RAKLYYLRDKMNALKK 270
           RAKLYYLRDK+NALKK
Sbjct: 212 RAKLYYLRDKVNALKK 224

[Close]

BLAST of MELO3C004891.2 vs. TAIR10
Match: AT5G11750.1 (Ribosomal protein L19 family protein)

HSP 1 Score: 223.0 bits (567), Expect = 2.2e-58
Identity = 116/152 (76.32%), Postives = 136/152 (89.47%), Query Frame = 0


Query: 119 FSSRGIATT-SSMGSALLGSPAVDSVIPPRIKFKRLDKTSRHIMQILDKEAVEEVKAHRE 178
           +S R  +TT  S+ S   GSP  D V+P RIKFKRLDKT++HIMQI+DKEAVEEV+  RE
Sbjct: 77  YSLRCFSTTGDSVQSTPQGSPESDCVVPQRIKFKRLDKTAKHIMQIVDKEAVEEVRNLRE 136

Query: 179 IPDIKPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNSTFRIRRVVAGVGIESLFPLY 238
           IP+IKPGYIVQLKVEVPENKRR+S +KG+VIARRNAGLNSTFRIRR+VAGVG+ES+FPLY
Sbjct: 137 IPEIKPGYIVQLKVEVPENKRRVSIVKGVVIARRNAGLNSTFRIRRLVAGVGVESMFPLY 196

Query: 239 SPNIKEIKVLEKKKVRRAKLYYLRDKMNALKK 270
           SPN++EIKV++KKKVRRAKLYYLRDK+NALKK
Sbjct: 197 SPNLREIKVVDKKKVRRAKLYYLRDKVNALKK 228

[Close]

BLAST of MELO3C004891.2 vs. TAIR10
Match: AT4G17560.1 (Ribosomal protein L19 family protein)

HSP 1 Score: 135.6 bits (340), Expect = 4.6e-32
Identity = 63/108 (58.33%), Postives = 92/108 (85.19%), Query Frame = 0


Query: 160 IMQILDKEAVEEVKAHREIPDIKPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNSTF 219
           +M IL+++A+E  +  R +P+I+ G IV++K+EVPENKRR+S  KGIV++R+NAG+++T 
Sbjct: 114 VMGILNQKAIEVAEKVRPVPEIRTGDIVEIKLEVPENKRRLSIYKGIVMSRQNAGIHTTI 173

Query: 220 RIRRVVAGVGIESLFPLYSPNIKEIKVLEKKKVRRAKLYYLRDKMNAL 268
           RIRR++AG+G+E +FP+YSPNIKEIKV+  +KVRRA+LYYLRDK+  L
Sbjct: 174 RIRRIIAGIGVEIVFPIYSPNIKEIKVVSHRKVRRARLYYLRDKLPRL 221

[Close]

BLAST of MELO3C004891.2 vs. TAIR10
Match: AT5G47190.1 (Ribosomal protein L19 family protein)

HSP 1 Score: 135.2 bits (339), Expect = 6.0e-32
Identity = 63/108 (58.33%), Postives = 91/108 (84.26%), Query Frame = 0


Query: 160 IMQILDKEAVEEVKAHREIPDIKPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNSTF 219
           IM +L+K+A+E  +  R +P ++ G IV++K+EVPENKRR+S  KGIV++R+NAG+++T 
Sbjct: 118 IMGLLNKKAIEVAETVRPVPGLRTGDIVEIKLEVPENKRRLSIYKGIVMSRQNAGIHTTI 177

Query: 220 RIRRVVAGVGIESLFPLYSPNIKEIKVLEKKKVRRAKLYYLRDKMNAL 268
           RIRR++AG+G+E +FP+YSPNIKEIKV+  +KVRRA+LYYLRDK+  L
Sbjct: 178 RIRRIIAGIGVEIVFPIYSPNIKEIKVVSHRKVRRARLYYLRDKLPRL 225

[Close]

BLAST of MELO3C004891.2 vs. Swiss-Prot
Match: sp|P82413|RK19_SPIOL (50S ribosomal protein L19, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL19 PE=1 SV=2)

HSP 1 Score: 137.1 bits (344), Expect = 2.9e-31
Identity = 71/123 (57.72%), Postives = 96/123 (78.05%), Query Frame = 0


Query: 145 PPRIKFKRLDKTSRHIMQILDKEAVEEVKAHREIPDIKPGYIVQLKVEVPENKRRISTLK 204
           PPR +  +L      IM IL+K+AV   +  R +P I+ G IVQ+++EVPENKRR+S  K
Sbjct: 111 PPRQQRVKLG----DIMGILNKKAVHAAEELRPVPGIRTGDIVQIRLEVPENKRRLSVYK 170

Query: 205 GIVIARRNAGLNSTFRIRRVVAGVGIESLFPLYSPNIKEIKVLEKKKVRRAKLYYLRDKM 264
           GIVI+R+NAG+++T RIRR++AGVG+E +FPLYSPNIKEIKV+  +KVR+A+LYYLRDK+
Sbjct: 171 GIVISRQNAGIHTTIRIRRIIAGVGVEIVFPLYSPNIKEIKVVSHRKVRKARLYYLRDKL 229

Query: 265 NAL 268
             L
Sbjct: 231 PRL 229

[Close]

BLAST of MELO3C004891.2 vs. Swiss-Prot
Match: sp|Q8W463|RK191_ARATH (50S ribosomal protein L19-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g17560 PE=2 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 8.3e-31
Identity = 63/108 (58.33%), Postives = 92/108 (85.19%), Query Frame = 0


Query: 160 IMQILDKEAVEEVKAHREIPDIKPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNSTF 219
           +M IL+++A+E  +  R +P+I+ G IV++K+EVPENKRR+S  KGIV++R+NAG+++T 
Sbjct: 114 VMGILNQKAIEVAEKVRPVPEIRTGDIVEIKLEVPENKRRLSIYKGIVMSRQNAGIHTTI 173

Query: 220 RIRRVVAGVGIESLFPLYSPNIKEIKVLEKKKVRRAKLYYLRDKMNAL 268
           RIRR++AG+G+E +FP+YSPNIKEIKV+  +KVRRA+LYYLRDK+  L
Sbjct: 174 RIRRIIAGIGVEIVFPIYSPNIKEIKVVSHRKVRRARLYYLRDKLPRL 221

[Close]

BLAST of MELO3C004891.2 vs. Swiss-Prot
Match: sp|Q8RXX5|RK192_ARATH (50S ribosomal protein L19-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g47190 PE=2 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.1e-30
Identity = 63/108 (58.33%), Postives = 91/108 (84.26%), Query Frame = 0


Query: 160 IMQILDKEAVEEVKAHREIPDIKPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNSTF 219
           IM +L+K+A+E  +  R +P ++ G IV++K+EVPENKRR+S  KGIV++R+NAG+++T 
Sbjct: 118 IMGLLNKKAIEVAETVRPVPGLRTGDIVEIKLEVPENKRRLSIYKGIVMSRQNAGIHTTI 177

Query: 220 RIRRVVAGVGIESLFPLYSPNIKEIKVLEKKKVRRAKLYYLRDKMNAL 268
           RIRR++AG+G+E +FP+YSPNIKEIKV+  +KVRRA+LYYLRDK+  L
Sbjct: 178 RIRRIIAGIGVEIVFPIYSPNIKEIKVVSHRKVRRARLYYLRDKLPRL 225

[Close]

BLAST of MELO3C004891.2 vs. Swiss-Prot
Match: sp|Q2VZV5|RL19_MAGSA (50S ribosomal protein L19 OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) OX=342108 GN=rplS PE=3 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.3e-20
Identity = 50/106 (47.17%), Postives = 77/106 (72.64%), Query Frame = 0


Query: 159 HIMQILDKEAVEEVKAHREIPDIKPGYIVQLKVEVPE-NKRRISTLKGIVIARRNAGLNS 218
           +I++ L+KE +E++ A R +P   PG  +++ V+V E N+ R+   +G+ IAR+N GLNS
Sbjct: 3   NIIEQLEKEQIEKLTADRGVPSFAPGDTLKVNVKVIEGNRERVQAYEGVCIARKNDGLNS 62

Query: 219 TFRIRRVVAGVGIESLFPLYSPNIKEIKVLEKKKVRRAKLYYLRDK 264
           +F +R++  G G+E +FPLYSPNI  I+V+ +  VRRAKLYYLRD+
Sbjct: 63  SFVVRKISYGEGVERIFPLYSPNIASIEVVRRGDVRRAKLYYLRDR 108

[Close]

BLAST of MELO3C004891.2 vs. Swiss-Prot
Match: sp|B6IP95|RL19_RHOCS (50S ribosomal protein L19 OS=Rhodospirillum centenum (strain ATCC 51521 / SW) OX=414684 GN=rplS PE=3 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.9e-19
Identity = 50/106 (47.17%), Postives = 75/106 (70.75%), Query Frame = 0


Query: 159 HIMQILDKEAVEEVKAHREIPDIKPGYIVQLKVEVPENKR-RISTLKGIVIARRNAGLNS 218
           +I+Q L++E V ++ A + IP   PG  V++ V+V E  R R+   +G+VIAR+NAGLNS
Sbjct: 2   NILQQLEQEQVAKLTAGKTIPAFSPGDTVRVNVKVVEGTRERVQAYEGVVIARKNAGLNS 61

Query: 219 TFRIRRVVAGVGIESLFPLYSPNIKEIKVLEKKKVRRAKLYYLRDK 264
           +F +R++  G G+E +FPLYSP I  ++++ K  VRRAKLYYLR +
Sbjct: 62  SFTVRKISYGEGVERVFPLYSPRIDSVELVRKGDVRRAKLYYLRGR 107

[Close]

BLAST of MELO3C004891.2 vs. TrEMBL
Match: tr|A0A1S3CHC3|A0A1S3CHC3_CUCME (50S ribosomal protein L19-2, chloroplastic-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500938 PE=4 SV=1)

HSP 1 Score: 524.2 bits (1349), Expect = 1.7e-145
Identity = 270/270 (100.00%), Postives = 270/270 (100.00%), Query Frame = 0


Query: 1   MQGFRRINQLVRRQSPDAHFKLIRGYPLNGDASCSCSAPMLMENSFTIPCLFGKSYGSLS 60
           MQGFRRINQLVRRQSPDAHFKLIRGYPLNGDASCSCSAPMLMENSFTIPCLFGKSYGSLS
Sbjct: 1   MQGFRRINQLVRRQSPDAHFKLIRGYPLNGDASCSCSAPMLMENSFTIPCLFGKSYGSLS 60

Query: 61  GSLWRSFSWSGNQYPEAFQKNMSSQMEFVALRKHASSTFSVIQSSRPHFFQLAEIAAPFS 120
           GSLWRSFSWSGNQYPEAFQKNMSSQMEFVALRKHASSTFSVIQSSRPHFFQLAEIAAPFS
Sbjct: 61  GSLWRSFSWSGNQYPEAFQKNMSSQMEFVALRKHASSTFSVIQSSRPHFFQLAEIAAPFS 120

Query: 121 SRGIATTSSMGSALLGSPAVDSVIPPRIKFKRLDKTSRHIMQILDKEAVEEVKAHREIPD 180
           SRGIATTSSMGSALLGSPAVDSVIPPRIKFKRLDKTSRHIMQILDKEAVEEVKAHREIPD
Sbjct: 121 SRGIATTSSMGSALLGSPAVDSVIPPRIKFKRLDKTSRHIMQILDKEAVEEVKAHREIPD 180

Query: 181 IKPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNSTFRIRRVVAGVGIESLFPLYSPN 240
           IKPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNSTFRIRRVVAGVGIESLFPLYSPN
Sbjct: 181 IKPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNSTFRIRRVVAGVGIESLFPLYSPN 240

Query: 241 IKEIKVLEKKKVRRAKLYYLRDKMNALKKQ 271
           IKEIKVLEKKKVRRAKLYYLRDKMNALKKQ
Sbjct: 241 IKEIKVLEKKKVRRAKLYYLRDKMNALKKQ 270

[Close]

BLAST of MELO3C004891.2 vs. TrEMBL
Match: tr|A0A1S3CHF9|A0A1S3CHF9_CUCME (50S ribosomal protein L19-2, chloroplastic-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500938 PE=4 SV=1)

HSP 1 Score: 517.7 bits (1332), Expect = 1.6e-143
Identity = 269/270 (99.63%), Postives = 269/270 (99.63%), Query Frame = 0


Query: 1   MQGFRRINQLVRRQSPDAHFKLIRGYPLNGDASCSCSAPMLMENSFTIPCLFGKSYGSLS 60
           MQGFRRINQLVRRQSPDAHFKLIRGYPLNGDASCSCSAPMLMENSFTIPCLFGKSYGSLS
Sbjct: 1   MQGFRRINQLVRRQSPDAHFKLIRGYPLNGDASCSCSAPMLMENSFTIPCLFGKSYGSLS 60

Query: 61  GSLWRSFSWSGNQYPEAFQKNMSSQMEFVALRKHASSTFSVIQSSRPHFFQLAEIAAPFS 120
           GSLWRSFSWSGNQYPEAF KNMSSQMEFVALRKHASSTFSVIQSSRPHFFQLAEIAAPFS
Sbjct: 61  GSLWRSFSWSGNQYPEAF-KNMSSQMEFVALRKHASSTFSVIQSSRPHFFQLAEIAAPFS 120

Query: 121 SRGIATTSSMGSALLGSPAVDSVIPPRIKFKRLDKTSRHIMQILDKEAVEEVKAHREIPD 180
           SRGIATTSSMGSALLGSPAVDSVIPPRIKFKRLDKTSRHIMQILDKEAVEEVKAHREIPD
Sbjct: 121 SRGIATTSSMGSALLGSPAVDSVIPPRIKFKRLDKTSRHIMQILDKEAVEEVKAHREIPD 180

Query: 181 IKPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNSTFRIRRVVAGVGIESLFPLYSPN 240
           IKPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNSTFRIRRVVAGVGIESLFPLYSPN
Sbjct: 181 IKPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNSTFRIRRVVAGVGIESLFPLYSPN 240

Query: 241 IKEIKVLEKKKVRRAKLYYLRDKMNALKKQ 271
           IKEIKVLEKKKVRRAKLYYLRDKMNALKKQ
Sbjct: 241 IKEIKVLEKKKVRRAKLYYLRDKMNALKKQ 269

[Close]

BLAST of MELO3C004891.2 vs. TrEMBL
Match: tr|A0A0A0LV41|A0A0A0LV41_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G126060 PE=4 SV=1)

HSP 1 Score: 475.3 bits (1222), Expect = 9.0e-131
Identity = 253/270 (93.70%), Postives = 254/270 (94.07%), Query Frame = 0


Query: 1   MQGFRRINQLVRRQSPDAHFKLIRGYPLNGDASCSCSAPMLMENSFTIPCLFGKSYGSLS 60
           MQGFRRINQLVRRQ PDA+FKLIRGYPLNGDA CSCSAPM MENSFTIP LFGKSYGSL 
Sbjct: 138 MQGFRRINQLVRRQIPDANFKLIRGYPLNGDAGCSCSAPMSMENSFTIPYLFGKSYGSLC 197

Query: 61  GSLWRSFSWSGNQYPEAFQKNMSSQMEFVALRKHASSTFSVIQSSRPHFFQLAEIAAPFS 120
           GS  RSFS SGNQYPEAF KNMSSQMEFV LRKHASSTFS  QSSRPHFFQLAE AAPFS
Sbjct: 198 GSFLRSFSRSGNQYPEAF-KNMSSQMEFVPLRKHASSTFSAFQSSRPHFFQLAETAAPFS 257

Query: 121 SRGIATTSSMGSALLGSPAVDSVIPPRIKFKRLDKTSRHIMQILDKEAVEEVKAHREIPD 180
           SRGIATTSSM SAL GSPAVDSVIPPRIKFKRLDKTSRHIMQILDKEAVEEVKA REIPD
Sbjct: 258 SRGIATTSSMESALQGSPAVDSVIPPRIKFKRLDKTSRHIMQILDKEAVEEVKARREIPD 317

Query: 181 IKPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNSTFRIRRVVAGVGIESLFPLYSPN 240
           IKPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNSTFRIRRVVAGVGIESLFPLYSPN
Sbjct: 318 IKPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNSTFRIRRVVAGVGIESLFPLYSPN 377

Query: 241 IKEIKVLEKKKVRRAKLYYLRDKMNALKKQ 271
           IKEIKVLEKKKVRRAKLYYLRDKMNALKKQ
Sbjct: 378 IKEIKVLEKKKVRRAKLYYLRDKMNALKKQ 406

[Close]

BLAST of MELO3C004891.2 vs. TrEMBL
Match: tr|A0A1S3CHY3|A0A1S3CHY3_CUCME (50S ribosomal protein L19, chloroplastic-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103500938 PE=4 SV=1)

HSP 1 Score: 445.3 bits (1144), Expect = 9.9e-122
Identity = 237/270 (87.78%), Postives = 237/270 (87.78%), Query Frame = 0


Query: 1   MQGFRRINQLVRRQSPDAHFKLIRGYPLNGDASCSCSAPMLMENSFTIPCLFGKSYGSLS 60
           MQGFRRINQLVRRQSPDAHFKLIRGYPLNGDASCSCSAPMLMENSFTIPCLFGKSYGSLS
Sbjct: 1   MQGFRRINQLVRRQSPDAHFKLIRGYPLNGDASCSCSAPMLMENSFTIPCLFGKSYGSLS 60

Query: 61  GSLWRSFSWSGNQYPEAFQKNMSSQMEFVALRKHASSTFSVIQSSRPHFFQLAEIAAPFS 120
           GSLWRSFSWSGNQYPEAF                                 LAEIAAPFS
Sbjct: 61  GSLWRSFSWSGNQYPEAF---------------------------------LAEIAAPFS 120

Query: 121 SRGIATTSSMGSALLGSPAVDSVIPPRIKFKRLDKTSRHIMQILDKEAVEEVKAHREIPD 180
           SRGIATTSSMGSALLGSPAVDSVIPPRIKFKRLDKTSRHIMQILDKEAVEEVKAHREIPD
Sbjct: 121 SRGIATTSSMGSALLGSPAVDSVIPPRIKFKRLDKTSRHIMQILDKEAVEEVKAHREIPD 180

Query: 181 IKPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNSTFRIRRVVAGVGIESLFPLYSPN 240
           IKPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNSTFRIRRVVAGVGIESLFPLYSPN
Sbjct: 181 IKPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNSTFRIRRVVAGVGIESLFPLYSPN 237

Query: 241 IKEIKVLEKKKVRRAKLYYLRDKMNALKKQ 271
           IKEIKVLEKKKVRRAKLYYLRDKMNALKKQ
Sbjct: 241 IKEIKVLEKKKVRRAKLYYLRDKMNALKKQ 237

[Close]

BLAST of MELO3C004891.2 vs. TrEMBL
Match: tr|A0A2P6P5I7|A0A2P6P5I7_ROSCH (Putative ribosomal protein L19 OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr7g0192431 PE=4 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 1.7e-60
Identity = 145/261 (55.56%), Postives = 175/261 (67.05%), Query Frame = 0


Query: 10  LVRRQSPDAHFKLIRGYPLNGDASCSCSAPMLMENSFTIPCLFGKSYGSLSGSLWRSFSW 69
           L R+ S  AHF  I   P  G A  S S             +     GSLS   + S++ 
Sbjct: 11  LHRQSSKMAHFSPIGANPFRGGAGFSGS-------------IASNGVGSLSKCSYHSWA- 70

Query: 70  SGNQYPEAFQKNMSSQMEFVALRKHASSTFSVIQSSRPHFFQLAEIAAPFSSRGIATTSS 129
                  AF K   SQ E +      SS+  +++S +   F+   ++ PF SR + T  +
Sbjct: 71  -------AFAKT-GSQTETLT----CSSSAMLLRSPQLGLFRWTAVSPPFPSRCMTTVGN 130

Query: 130 MGSALLGSPAVDSVIPPRIKFKRLDKTSRHIMQILDKEAVEEVKAHREIPDIKPGYIVQL 189
              +   +   +   PPRIKFKRLDKT++HIMQILDKEAV+EV+ HREIPDIKPGYIVQL
Sbjct: 131 TVESSTQNSMTELDAPPRIKFKRLDKTAKHIMQILDKEAVQEVRGHREIPDIKPGYIVQL 190

Query: 190 KVEVPENKRRISTLKGIVIARRNAGLNSTFRIRRVVAGVGIESLFPLYSPNIKEIKVLEK 249
           +VEVP+NKRR+S LKGIVIARRNAGLNSTFRIRR+VAGVG+ESLFPLYSPNIKEIK+L+K
Sbjct: 191 RVEVPDNKRRVSVLKGIVIARRNAGLNSTFRIRRLVAGVGVESLFPLYSPNIKEIKILDK 245

Query: 250 KKVRRAKLYYLRDKMNALKKQ 271
           KKVRRAKLYYLRDKMNALKKQ
Sbjct: 251 KKVRRAKLYYLRDKMNALKKQ 245

The following BLAST results are available for this feature:

BLAST of MELO3C004891.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008462626.1	2.5e-145	100.00	PREDICTED: 50S ribosomal protein L19-2, chloroplastic-like isoform X1 [Cucumis m...	[more]
XP_008462635.1	2.4e-143	99.63	PREDICTED: 50S ribosomal protein L19-2, chloroplastic-like isoform X2 [Cucumis m...	[more]
XP_011654038.1	1.4e-130	93.70	PREDICTED: 50S ribosomal protein L19-2, chloroplastic isoform X1 [Cucumis sativu...	[more]
KGN64844.1	1.4e-130	93.70	hypothetical protein Csa_1G126060 [Cucumis sativus]	[more]
XP_008462642.1	1.5e-121	87.78	PREDICTED: 50S ribosomal protein L19, chloroplastic-like isoform X3 [Cucumis mel...	[more]

BLAST of MELO3C004891.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G24240.1	2.0e-59	61.58	Ribosomal protein L19 family protein	[more]
AT4G11630.1	7.6e-59	62.76	Ribosomal protein L19 family protein	[more]
AT5G11750.1	2.2e-58	76.32	Ribosomal protein L19 family protein	[more]
AT4G17560.1	4.6e-32	58.33	Ribosomal protein L19 family protein	[more]
AT5G47190.1	6.0e-32	58.33	Ribosomal protein L19 family protein	[more]

BLAST of MELO3C004891.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P82413\|RK19_SPIOL	2.9e-31	57.72	50S ribosomal protein L19, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL19 P...	[more]
sp\|Q8W463\|RK191_ARATH	8.3e-31	58.33	50S ribosomal protein L19-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At...	[more]
sp\|Q8RXX5\|RK192_ARATH	1.1e-30	58.33	50S ribosomal protein L19-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At...	[more]
sp\|Q2VZV5\|RL19_MAGSA	1.3e-20	47.17	50S ribosomal protein L19 OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 70...	[more]
sp\|B6IP95\|RL19_RHOCS	1.9e-19	47.17	50S ribosomal protein L19 OS=Rhodospirillum centenum (strain ATCC 51521 / SW) OX...	[more]

BLAST of MELO3C004891.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CHC3\|A0A1S3CHC3_CUCME	1.7e-145	100.00	50S ribosomal protein L19-2, chloroplastic-like isoform X1 OS=Cucumis melo OX=36...	[more]
tr\|A0A1S3CHF9\|A0A1S3CHF9_CUCME	1.6e-143	99.63	50S ribosomal protein L19-2, chloroplastic-like isoform X2 OS=Cucumis melo OX=36...	[more]
tr\|A0A0A0LV41\|A0A0A0LV41_CUCSA	9.0e-131	93.70	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G126060 PE=4 SV=1	[more]
tr\|A0A1S3CHY3\|A0A1S3CHY3_CUCME	9.9e-122	87.78	50S ribosomal protein L19, chloroplastic-like isoform X3 OS=Cucumis melo OX=3656...	[more]
tr\|A0A2P6P5I7\|A0A2P6P5I7_ROSCH	1.7e-60	55.56	Putative ribosomal protein L19 OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr7g01924...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005840	ribosome
GO:0005622	intracellular

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **INTERPRO**
Term	Definition
IPR008991	Translation_prot_SH3-like_sf
IPR038657	L19_sf
IPR001857	Ribosomal_L19

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0044238	primary metabolic process
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005840	ribosome
cellular_component	GO:0044444	cytoplasmic part
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005762	mitochondrial large ribosomal subunit
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C004891.2.1	MELO3C004891.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001857	Ribosomal protein L19	PRINTS	PR00061	RIBOSOMALL19	coord: 224..247 score: 40.62 coord: 165..194 score: 20.56
IPR001857	Ribosomal protein L19	TIGRFAM	TIGR01024	TIGR01024	coord: 169..264 e-value: 1.2E-29 score: 100.7
IPR001857	Ribosomal protein L19	PFAM	PF01245	Ribosomal_L19	coord: 168..265 e-value: 1.0E-31 score: 109.1
IPR001857	Ribosomal protein L19	PANTHER	PTHR15680	RIBOSOMAL PROTEIN L19	coord: 145..269
IPR038657	Ribosomal protein L19 superfamily	GENE3D	G3DSA:2.30.30.790		coord: 149..270 e-value: 9.7E-20 score: 72.6
IPR008991	Translation protein SH3-like domain superfamily	SUPERFAMILY	SSF50104	Translation proteins SH3-like domain	coord: 167..265

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C004891.2	Csa1G126060	Cucumber (Chinese Long) v2	cumedB010
MELO3C004891.2	CSPI01G13820	Wild cucumber (PI 183967)	cpimedB011
MELO3C004891.2	Cucsa.206800	Cucumber (Gy14) v1	cgymedB370
MELO3C004891.2	CmaCh13G002520	Cucurbita maxima (Rimu)	cmamedB215
MELO3C004891.2	CmoCh13G002540	Cucurbita moschata (Rifu)	cmomedB203
MELO3C004891.2	Lsi03G000440	Bottle gourd (USVL1VR-Ls)	lsimedB255
MELO3C004891.2	Cp4.1LG20g07290	Cucurbita pepo (Zucchini)	cpemedB563
MELO3C004891.2	CsGy1G013840	Cucumber (Gy14) v2	cgybmedB009
MELO3C004891.2	Cla003417	Watermelon (97103) v1	medwmB165
MELO3C004891.2	ClCG01G013640	Watermelon (Charleston Gray)	medwcgB127
MELO3C004891.2	Cla97C01G012660	Watermelon (97103) v2	medwmbB127
MELO3C004891.2	Bhi08G000157	Wax gourd	medwgoB176
MELO3C004891.2	Carg23713	Silver-seed gourd	carmedB0174
MELO3C004891.2	CsaV3_1G014020	Cucumber (Chinese Long) v3	cucmedB009

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C004891.2	Cucurbita maxima (Rimu)	cmamedB161
MELO3C004891.2	Cucurbita pepo (Zucchini)	cpemedB880