MELO3C002906 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C002906
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Ribonuclease H
Location	chr9 : 7338855 .. 7348666 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGGGAAAGAAGTAGGTGGAGTCAGTGAGCAGCTTTGAATGGACAAAAAAACCTATTGGACGACCTTGAAAGCTGGGAATCTTCATAGTCACCGGAAAACTACCTTCTGATGAACTGCCTCTCCCAAGTCTCTACCTATACTCGCGTCATTTTCAGAAGGACCAATCTTGTTTTTGCGGCTTCAACCTCCATTCATGGCTGCTCTAATCCCTACTGGAGCTCAACCTTTCACAATGTCGCTGTAAAGGCTACTGCTTTAGACTCCTTGTGTTCCAGATTCGGTCTACGGTGCTATTCCACTCGAAAACCCCGAAAACCCCGAAAGCCAACTTCTCCTTCACCCAAGTTGGATTCTGAACCTCCTATGGAATCAGAGATGGGCGACTTCTTTGTCGTTCGAAAAGGGGATGTTGTTGGAGTCTATAAAAGTTTTAGTGATTGTCATGCGCAAATTGGATCTTCGGTACTCATTTCTTCAGTTTTCACTAGTGATTTCTTGCTTCTTCAGCTACTGTTCTAATTGATTGATTATTTTCTTGCTTTCTCTGAGACTTGACTGCTTTGGTGCTTCTCGGCTTTCTTGTTTGAAGTTACATTAGGGTTTTATATTGGTTACATTTAATTGTTTTCGAAGCATTAGCTCAATGATCGATCAGTTCTTCTCCTTCTGCGGGCTTTTTATTGCATAAAGCTTATGTTTTTACTTGAGAAGCATAGGTTTTCTTATTTGTTAGTTTTACCCTTTCCTGCGGATTTCTTGTAATTGGTACATATCATTTAGTGGATTAAGCTCGGGTGTTATCTTTTCTTTTCTATGGCAGATATGCGATCTTCCTGTTAGTGTGTTTAAAGGACACTCATTACCAAAAGACAGTGAGGAATATCTTGCTTCCATTGGGCTTAAGAACGCTCTGTACACTATTAAAGCTGCAGATATGAGACCTGATCTTTTCGGTTCGCTCGTGCCTTGCACTTTTCATGTATGGTGTTTCATTAATTTGTTGATTGAGTTAAAAAGTTTAAGAGACCCTTTTCTGCCATGTTTATATAAGAAAATGGTAGGAAACAGATAATAGTTTGGTCTTTTATGGAACTATTTAAGGATTCAATTGGTTGGTATTTTCCCAAATAGATTATCCTAGGTTGGTCATTATAGAAGAGGGTGAATTTTACGGCTTTTGTCTTCCATTTCTTATAATTGTTAGCAAGGGATCATAGTGTTCGTGAAGAAATGGCATATTATTTGTCTCCGTAGGTCATCACTTTGAGTTTATGCTCCACTTCCTCTCTTACCATGTAACTTTCTATTTTGTAGAGATCATGGTTTATTGTCTTATAGACAGAACCATATAACTAGTCAGTTTGAACTTTAAAGCCAGACGTTGAAGGCTGTAAACTACAGCCACATGAAGCATTTTATAATTACCGGTCTTTTCCAATAGCTAAATTAGGAGGTTAGGCTTTCAATGTTGATTATACATAGATTCAGTGTTTACTAGATGTACTATCAAGAACATCTAAAATGTTTCAATTTATCCAATATCCTTCCTAGACTATCTTTGTTCACTCTAGCATGAGTTAAAATGTTTCTGTCGGCCAGGATGGAGATGCTTCTCTTACAGGTGAGACTTCTGGCCAAGATGCCATAAAGAAGAGATCAAGAGAGGCTATTGTATCAGAAAATGTTGTAAGTTTTTAACTGAAGCAAATAATGCCTCTAATTGTATACAAAGTAACTTGCTAAACTGTATTTGATATGCAACTTATGGCTTTTGTTGTCATGTTTGTTTGCATGTGGTTAATGTAGATTTTAATGTTTGCAGGGGTCGTCTGTTTTAACTCCTACATCAGTAACTCCTACATCAGAAGATCCCACGAGGAAACATATCAAGTTGGAAGATTCCATTGTGTCCCTATCCTCCAACCACGTAAGTCATTGGGTTGTGTTCGTGTGATTCGGTATTTATTGTCTTGTGTGGCTGTTAGGTATCTAACATAATATTTTCTGCAAAAGACAAGTAAGCAGCAAACATACAGCCAAATGACACCTGGAAGAATGAAAATATTTACAGTCTCACTGTTTGATTGAGAGTTCTTCAATATACAGAGATATTTATACTTCGAAAGAACGATTATGCTCCCTTTGCCTTAAGAAGACAAGATACAATCCCCTAAACTCTAGAGAGAGAGGGTTGGTTCTCACTTCTCATATATTCACTTCAATACCAAAAACATACCCTAGGCACACACTTCCCACAACTATAAGAACCCTGAGAATGCACAACCAAAGAGTTCCCTACTTAATACTGTTCCTACCCTTCATGAATAACTTGTCCTCAAGGTGAAAAAAGGAAACTGCCACATGTAGAATTCCATTGCTTCCCAAGTTGCATTAGATGGCAGTTGCCATCGCATTGTATGAGCCATTCATCCATGCTTTTTCCACATTCCATCTAATCCCTAAGCACGCCTTTCGGTTCAACTTGCCATTCATTATTCTCCAGAAATAGAGGTAATGACTGTTAAGGCTGATTGGAACCCTGTAACTTCTTTAACTGGTCTTACAAACAGAGTAAGGCGTGAATAATGGATGTTCCAATGTATCGTATGAAGTCTGCTTTTAAACTAGTTATGTATTTGATTTTTTCCTATGTTGCTGTAAGTGTATGATCATTCAAAAGATGTTAAACCAGTAAACCTTCAGAATTTTCCCATCTTCTGCCAGCTGCTTATATCAAGTTGTTAATCTTATCATGGGGTTGTTTGGGGCATTGAGTTGATATAAAATGTTTGGAGTGCATATACCTGGAGAGTTTATTTGCCTACAGAGTTCATGTTTGTGTTTACGAGTGCATCGTTGTTTTGTCTGAGTTCATATGTATATGTTTGGGGTACAGAGTTGAGTTCATATGTTAGGAGTACCTGATAAGTTTTTTAAACTCTTCACAATATGTTTTAATGATTACTATTTTTGTTTTGAAACGTTTTTTTGCAATAATTCTACCCATTTTTGTTTGAATAAGGTATGGATTGCAATTTTTTTTCCTTTTATTTTAAAAAGTTTTTCTTTTTTTCAATTTTTGTTTTTTGGTAATGAACAACGATTAACCAACTACATTTTTTGCAAGAATATAATTAAATGAAATAGGAAACCAAAGAGAAAATAGAACTTTTGATTCCAATTTTTGTACATGAATTTCAACATATTATTCTTCTTTTTCTTTTTCTTCTTGTTGCTACTCTGTATTTTTCCGTCATTAATTTTTTTAGTTGAATCTCCCCTCTCATGTTTCATCAATTCCACTTTCAATTCCTCCGGAGGATCATCAGAGGAAAAATGTCCATTTTCATTTTTATTTGCTAGAAAATGCTCTAGAAAACTAATAGGGCTTCGTACATGTCTGACAAAAAGGGTTAAAAGAAATAGGCCCATAGCATAGTGCACAAACTTATTTACTTTGGCAAAAATGACAAGAAAAAAAAAAAAGCCCAAACCATGTGATACCCTTGTTATACACTTGATACACCACTGACACATACTTGATATGCTTGATACACACGACACACTTGATATACTACTAATATACATTTGATACATTATTGATATCTACTTTGCTATGCTTGATACACCTATGATATACATTTGATACCCTTCTAATATGCACTTGGTACACTTGATTTGCACTTAATACATACTTGATACACGTGATATACACTTAATATACACTTGGTACACATTTGATACACACATAATAAACTTGATATACACTTCATACATACTTGATCTACCAAATATTGGGATTTAAGATAAAAGATTTTGAATTTTTGTTAGATGATCGAGAAAAGTAAAATATATATTTATTGTAAAAATATAAACCACAAACACGTACTATTATAACTCAAACTAAAATAATTTACACCTCAAACACAAACTATCTGTTAGACCTCCCATCAAGTTTGTTTACAAAAGAAAGAATAAAGAACACGTGTAAAATGTGGTAGGGGGAGATAAGTCGGTGAGCTGTCTAGTATAAATAGGAGTTGTTTAGGTGGGAAAGTCAGTTAGCATTTTATGTGAAGTTTAGTTGTTGCATCTTGAGAGAAAGATCAACAAAGTGTATTTCTGAATTGATAGTATCAATTCAGATTGTAAATCTATATTGAAATAAATACGAATTTCATACCAAAGATAGAGTTCTATCACTATCATAACCCAACTATAAAAACCTAACATTATTTAACTCATTCCTTGCCTTAGACGTCGCCTAAAAACTTTTTCTCGTTTTTTTTGCCCTAAGTTGATAAAGATCAACTTGTCTCCTATAATGTCACATTGATTTATTTACCCAAATGCCATTAGACATATTTACTTAATTTTCTTTAAATTAAAAACCTTTAATATTTTGTCATTTTCAACATTTATGTGTGTATCAAATGTATCAAGTATATATCGTGTGTATCAAATGTACATTGGGTGTATCATTTGGGTCGGACTTATTTTTTGACATATCTGCAAAATGGAAAAAAGTGTGTGACAAGCTTGCAAATCCCTAAATTGCCACCCACTACAATTTTCCAAACAAGTATCTATTTTATGGTTTTTTTGTTATTTGTTATTTTTGTTTTGAGCTTTTGTTTTTGTTTGTTTTTTATTAACTTTTTATTCCTCCATTCTACTACATACATATTAATCCAAATTCTTAACACTCATTTAATATGTGAATTCATTTTACATATAACTATTGCATTTAAAGTAGACAAAATACAACTATTTATATAATCAACAACCATACAATACACTTTAACAATCCTAGAATGCATGAGTTGAACTTGGACAAAAAATAGGGTTGTTAGTAGGGTTTAATTACACGTTCACAAATAATAGAGATTGAAATTGGTCAACGGAGTTGGTTGCGTGAAGGTGGTTATCGGAGTTGTTTGCTGGAGGTGTCATCAGAGATGATTGTCGAACTTGCAATTGGTCGTCAGAGTTGGTTGTATGAAGAAGTTCATCAAAGTTGTTGTGGAAGGTGGATGTTAGAGCTTGTAATTGGTTGTTGGAGTTGGTCGCACGAAGGTGGTTTGTTGGGGACCCAAAATTGGTCCTGTGAAGTTAGTGCTGGAGTTGTCATTGGAGCCCAAAATTGGTCGCTAGAAGTGGTTGTTGAAGTCCAAGGTTGGTCGTCGGAGTTGGGCATGTGAAGTGGTTGTTGGGGTTAGTTCCCAGAGTGTTGTTGGATGGCCAATGAATGAAACATTGAAAAACGAAGAAAGGAGAGTTGGGGTGAGCTGGTAAAATATACCTACTCAACTCCAACATTTAAAGTTGGTGGGCCAAACAATGAGTTCTGATATATTTTACTGACTCAACTCATACTGGTGAGCCAAACCCAAGATCGTTATAAATTGATAAGATTGTTAATTGACCATTCATATACAAAGATTTAATTGGGGTTTTGAAATATTACTTGTAATTTTAAAAGGCCAAAACGAAACTAAAAAATGGTTTGTGGTCTCCTGATGATAATTATATTTTGTACAAAAGAACCGAGGATGCAATCATGCAAGTGGAATCTCATTTTAGTTTTGTTTCTAAACCAAGTGCTAGTCATGCTTTGATTTCATGGTCCAGATTCTGAAACGATCTTTCCAAAATACAATGGAATAGAATCCCTGAGTTTAAATTTTCAACTTACTTGACAGATTCTGATTGCCATAATAATTTTCCATGTACAGGAATCTTGCTTTCTAGAATTCGATGGTGCCTCAAAAGGAAATCCTGGACAAGCCGGGGCAGGAGCTGTTCTGCGAGCTCATGATGGGAGTGTGGTATACATTCTTGATTCTTCCTTTTGGAACCCACATTAACATGTGTATTCTTATTAATGCTTCTTATTAAGGCGTATCTAATCTCTCTCCCCCCTTGGAACAGATATGTCGACTGCGTGAAGGTCTAGGTATAGCAACCAATAATGTTGCTGAATATCGAGCTATTCTTTTAGGGTTGAAGTTTGCACTTAAGAAAGGGTTCACTAGGATTCACGTCCAAGGTGACTCCAAACTTGTCTGTATGCAGGTTGGTTACAATTTTTTTACCTTGCAATTTTTTTCCCTTGTCAATTTATTTCTTGTTGTGTATCTTCACATTATAAACTTGTTAAGTAAGTCATGATATATTTAGGAAATATTCAGAGGGATGGGTTTAATGGTTAATCTTTGGAGTTAAGCAAGAATCTGGAAGCTGAAAGTGAAAACTTTTTGTTTAAAGGATAATTTTTTTTTTTATAAAACATTGCAAAATTATTATTATATTGCAAGAATAATTTGTCTTGAAACTTGAAAGGAAATAGTTAGTCCAGACTGCATGAAATAATTTGTCATGAGATAGTCTTGTTTCTGTGTCAAAAGAGAAAAAAAAGTCCAAACTGCATGAAAGCTAATATTGTCATTTCTGACATGAGAAGCTTCCGATAGTATTGTTGGGCCTGACTTGCGACTGTCAAAGGACTATTTCATCAAGGGTTGTACTTCTCTTTTCTTCCAAGTAAGGGAAGGAGACTCAACTTCGTTTTCTCAATGTGCCTGCTCTGTGAAGGTTCCCCCCATACAACCAACCCTAACACAAGTAGGCAGGAGCGTTAGAAGAAAACATTCCAATTGACAAATGCAAAGTGAAGTCGTAGAACTTTTACTTAAAGCATTCTGATTCTAAAACTTTTGCTTGCTTTCTATTATCCCTTTTGTCAACACATGGGATGAAAGTCTACTACAGCGGAACAATTTTCTGGTTAACCGCATTGACGAAAAACCTTTCCTCTATTGAGATGTTAACAGGTCTTGTCTTCAAGTTGAAAAGTATATTGTCGATGTAGCTTCTTCCATATATGATTTCTTTTGAATATATTAGCATTGGTTTTTGTGGATGCTGATTGTGAAGATTCATTAATATAAAGTTTGAGGAGAATTTGAACCAAACTCAGTTCTTATATGGAGTTAATTATTAATGCATAGCTGTTGCAATTAAAGGATTAAAATGTATTCAGCCACTTTTTCTGGGAGATTTATATTCAAGTCCTCATTCTAAGATTATTTTCCCGAGTAGAATAGTTTTGCTGCAATACATTGTTTATGTGGTTATTTAATATTGGGGACTTCTAAAACTGGACTGAACCTGCAAGTGTTTTGTATTATCAACCTCCGTAGAATCAAAACCGTCCCTATCTGATAGAACCCTCTCTGTGCAAGCACCTGGGCCCATCTATTTTTTTTGATTTCATGGCATCTTCGTTGTCCCACTTTTCATTATGTATTTGTATATTCCATTGTACAGGTTCAAGGTTTATGGAAGGCAAAAAATGAAAATATATCTGAGTTATGTAATGAAGTTGTGAAGCTGAAGAATAAATTTCTCTCTTTCGAGGTCAATCATGTACTAAGGGTCAGTACCATTAATTCTTCTCTAATTGCGTCTTTCACAATGTTGTTTGTTTTGTTTCTGTTTATACTGTTGGGAACATTACACTTTTGGGATCAAAGTTTCGGTTTAAGTTTAGGTTACATATGGGTCCTTAAGTTTTGAAACTCAATAATTTTACCCCGGAGGTTTGCAAGTGCTCGGGTTTCTGTTAATACCAATGGAAGGCTGATGTGACACCTACTTTTATTAGAAAATTTTTTCCCCAAATTTTTATTCATTACATAAAATTTTTTTACTTATTTATTCTCTCCTCGCTTTCCTAATTCCTCCAGTTCGAACTAGCCGCCATTGGTGAGTGTCATTTTTTTCCCATCCTGTTTCGACTTCTCTCCTTTCTTTCATCTAAAATAAATTGAACGAATTCCCCTTTCATTGAAGGTTTTTCCCCTTCTAATTATTTAATTTATTTTTTTAGAAAAACAAAACTGGACAAATGGTACATCAGATCTGGCAGTTGTTGTTGACATGAGTCTCGAACGAGATCATTGATTAGAGAGAAGAAGGGAAGGGGAAGGATAAATGATTAGAAGGGAGAAGAATTTTTCATTTGAGAAATAGTGGGCTTGGGTCATGTTGAAAGTCCAGGGGTAGTTTAGATTGATTTTACCCTAATTTTTTTATTATTTTAATTAGGCTCGTGTTGCCTATAAATTTGTTTCCTTTGTACCTTTCTTTATCATCAAAAAATAATAAGAAGCATCTATACCGTGGATTTTCTCCTTAGACTAGGGTTTCCACGTAGACCTTGTGTTCTTTCTTCGTCTCTATTTTTCGATATTTACTAATAAAAATTATAATTCTTTTGTTTAAAAAGATAGGAAAACTATTCTTTAGTTAAAGTTTAGTGTCACGTACTCAAGTCAACTTTCCATTAGTATTTAATGGAGAATTTGGCAAATAAATTTAGGGGTAAAATTGTTGAGTTTGAAAACTAAAAGACACAAATGGAATGTGCACTCAACAACCTCAGAAAGCATAAATGTACTTTTCCGTTATTGTTTCTTGTGCTCTTAAGAATTTAGTGTAGGCTGTAGGTTCCTTACTATTTGAGATCCGAAGCTGGCTAAAATAATTTTGATCCTTAATTTCATTTGTCGCACAATGACAATTCTCATTTTAAAAATTGATGGCAGAGATGTCATATGACCACTTTCACTTTTATTGATTTATTGATATGATTATTTATGGGTCGATTTCATCCATGTTTAACTTGTCTAACTCTAAACCGTAGAAATACAGGCTTATACGTCTGTCTTGTTCTAGTTCAGTTTTTTGATAAACCAGTTATCGTAAGACAAATTAGAGTTTGCACTCATTCATTGAGGGAAAAATATAAATAAATCAAAAATAAAAATGTAAGAATACAACATACAAGAAAATCGATCTGACAGAAAGGGAGCTCAACTTTGAGAATGAACTCCCAAAATAGTGAGATCGAAGCCTAAAAATACGGACTTCCCATCTTGTTTTTTAACACCTGTTTGTGTACTTTATCTTGGTGTAAATTCTCTCATTTCTTTCGTGACTATATTCTTACTACCCTTAGATCCCAATGTAATTGCTTTTGTAATCTTCATGGCTATTACAACCCTTTTGTCTTCTCTTATTTGTTGATATTCTTACTTGTGCGTTCTTTGAAATTCTGACGTTCTGTCTTTCATCCTGGAAAGCATCTAAACTCAGAAGCCGATGCTCAAGCGAACTTGGCTCTCACTTTAGCTGGTAATACTTCATTTAAATAATTTTAGCGACTTTTTTTTTTTTAGGTTTGCCATAAGATTCACGAGTAAATGAGGTGGTCCTTTCTATTGTAGACGGCGAAATCCAGGAGTCTGAAGATTAATGGTTAAAATGCACCGCAGGATATATCTTACAGCATAGCAAAATTTTCTGAGGAGAGCATTGCCTTTGTAGGCCAATGCTTTGCATGCTACTATTCTTTACCCAAAATTGCCAAGATCTTTGGGCGTTGTTTTGGTTTTACCTACATTTCCGTGGCCCTAACTTAGCAAACTGGAATTCTAGTTGAGACAATGAATTAGTATTTATTTTCTTTTTATTATTCAATAGCATGTTTGGGAAGTTTCAAGCAAGGTGAGATTAACAAAATTGGGGCCATTTGGCATTTGGTTGAAAGTTCATTTGAGGACTAGATTTCAGGATTTGATTTTTCTTTTATAATTTTTTTTAAAATGTTGGAGATGACCTTCAACCTCAAGGAAGGTCGTGTAGATGCCTTATACCTTGAGTTTACGTAAAGGAGAATGTATTGCTCTTCATCATATTATTCTGTAAACTCTTTGAAATTTATAGAAAGGAAAATCTATTGCTCTTAC

mRNA sequence

AGGGAAAGAAGTAGGTGGAGTCAGTGAGCAGCTTTGAATGGACAAAAAAACCTATTGGACGACCTTGAAAGCTGGGAATCTTCATAGTCACCGGAAAACTACCTTCTGATGAACTGCCTCTCCCAAGTCTCTACCTATACTCGCGTCATTTTCAGAAGGACCAATCTTGTTTTTGCGGCTTCAACCTCCATTCATGGCTGCTCTAATCCCTACTGGAGCTCAACCTTTCACAATGTCGCTGTAAAGGCTACTGCTTTAGACTCCTTGTGTTCCAGATTCGGTCTACGGTGCTATTCCACTCGAAAACCCCGAAAACCCCGAAAGCCAACTTCTCCTTCACCCAAGTTGGATTCTGAACCTCCTATGGAATCAGAGATGGGCGACTTCTTTGTCGTTCGAAAAGGGGATGTTGTTGGAGTCTATAAAAGTTTTAGTGATTGTCATGCGCAAATTGGATCTTCGATATGCGATCTTCCTGTTAGTGTGTTTAAAGGACACTCATTACCAAAAGACAGTGAGGAATATCTTGCTTCCATTGGGCTTAAGAACGCTCTGTACACTATTAAAGCTGCAGATATGAGACCTGATCTTTTCGGTTCGCTCGTGCCTTGCACTTTTCATGATGGAGATGCTTCTCTTACAGGTGAGACTTCTGGCCAAGATGCCATAAAGAAGAGATCAAGAGAGGCTATTGTATCAGAAAATGTTGGGTCGTCTGTTTTAACTCCTACATCAGTAACTCCTACATCAGAAGATCCCACGAGGAAACATATCAAGTTGGAAGATTCCATTGTGTCCCTATCCTCCAACCACGAATCTTGCTTTCTAGAATTCGATGGTGCCTCAAAAGGAAATCCTGGACAAGCCGGGGCAGGAGCTGTTCTGCGAGCTCATGATGGGAGTGTGATATGTCGACTGCGTGAAGGTCTAGGTATAGCAACCAATAATGTTGCTGAATATCGAGCTATTCTTTTAGGGTTGAAGTTTGCACTTAAGAAAGGGTTCACTAGGATTCACGTCCAAGGTGACTCCAAACTTGTCTGTATGCAGGTTCAAGGTTTATGGAAGGCAAAAAATGAAAATATATCTGAGTTATGTAATGAAGTTGTGAAGCTGAAGAATAAATTTCTCTCTTTCGAGGTCAATCATGTACTAAGGCATCTAAACTCAGAAGCCGATGCTCAAGCGAACTTGGCTCTCACTTTAGCTGACGGCGAAATCCAGGAGTCTGAAGATTAATGGTTAAAATGCACCGCAGGATATATCTTACAGCATAGCAAAATTTTCTGAGGAGAGCATTGCCTTTGTAGGCCAATGCTTTGCATGCTACTATTCTTTACCCAAAATTGCCAAGATCTTTGGGCGTTGTTTTGGTTTTACCTACATTTCCGTGGCCCTAACTTAGCAAACTGGAATTCTAGTTGAGACAATGAATTAGTATTTATTTTCTTTTTATTATTCAATAGCATGTTTGGGAAGTTTCAAGCAAGGTGAGATTAACAAAATTGGGGCCATTTGGCATTTGGTTGAAAGTTCATTTGAGGACTAGATTTCAGGATTTGATTTTTCTTTTATAATTTTTTTTAAAATGTTGGAGATGACCTTCAACCTCAAGGAAGGTCGTGTAGATGCCTTATACCTTGAGTTTACGTAAAGGAGAATGTATTGCTCTTCATCATATTATTCTGTAAACTCTTTGAAATTTATAGAAAGGAAAATCTATTGCTCTTAC

Coding sequence (CDS)

ATGAACTGCCTCTCCCAAGTCTCTACCTATACTCGCGTCATTTTCAGAAGGACCAATCTTGTTTTTGCGGCTTCAACCTCCATTCATGGCTGCTCTAATCCCTACTGGAGCTCAACCTTTCACAATGTCGCTGTAAAGGCTACTGCTTTAGACTCCTTGTGTTCCAGATTCGGTCTACGGTGCTATTCCACTCGAAAACCCCGAAAACCCCGAAAGCCAACTTCTCCTTCACCCAAGTTGGATTCTGAACCTCCTATGGAATCAGAGATGGGCGACTTCTTTGTCGTTCGAAAAGGGGATGTTGTTGGAGTCTATAAAAGTTTTAGTGATTGTCATGCGCAAATTGGATCTTCGATATGCGATCTTCCTGTTAGTGTGTTTAAAGGACACTCATTACCAAAAGACAGTGAGGAATATCTTGCTTCCATTGGGCTTAAGAACGCTCTGTACACTATTAAAGCTGCAGATATGAGACCTGATCTTTTCGGTTCGCTCGTGCCTTGCACTTTTCATGATGGAGATGCTTCTCTTACAGGTGAGACTTCTGGCCAAGATGCCATAAAGAAGAGATCAAGAGAGGCTATTGTATCAGAAAATGTTGGGTCGTCTGTTTTAACTCCTACATCAGTAACTCCTACATCAGAAGATCCCACGAGGAAACATATCAAGTTGGAAGATTCCATTGTGTCCCTATCCTCCAACCACGAATCTTGCTTTCTAGAATTCGATGGTGCCTCAAAAGGAAATCCTGGACAAGCCGGGGCAGGAGCTGTTCTGCGAGCTCATGATGGGAGTGTGATATGTCGACTGCGTGAAGGTCTAGGTATAGCAACCAATAATGTTGCTGAATATCGAGCTATTCTTTTAGGGTTGAAGTTTGCACTTAAGAAAGGGTTCACTAGGATTCACGTCCAAGGTGACTCCAAACTTGTCTGTATGCAGGTTCAAGGTTTATGGAAGGCAAAAAATGAAAATATATCTGAGTTATGTAATGAAGTTGTGAAGCTGAAGAATAAATTTCTCTCTTTCGAGGTCAATCATGTACTAAGGCATCTAAACTCAGAAGCCGATGCTCAAGCGAACTTGGCTCTCACTTTAGCTGACGGCGAAATCCAGGAGTCTGAAGATTAA

Protein sequence

MNCLSQVSTYTRVIFRRTNLVFAASTSIHGCSNPYWSSTFHNVAVKATALDSLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPPMESEMGDFFVVRKGDVVGVYKSFSDCHAQIGSSICDLPVSVFKGHSLPKDSEEYLASIGLKNALYTIKAADMRPDLFGSLVPCTFHDGDASLTGETSGQDAIKKRSREAIVSENVGSSVLTPTSVTPTSEDPTRKHIKLEDSIVSLSSNHESCFLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKFALKKGFTRIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNHVLRHLNSEADAQANLALTLADGEIQESED*

Homology

[Close]

BLAST of MELO3C002906 vs. Swiss-Prot
Match: Y2228_MYCTU (Uncharacterized protein Rv2228c OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=Rv2228c PE=1 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.9e-17
Identity = 55/129 (42.64%), Postives = 73/129 (56.59%), Query Frame = 1


Query: 240 LEFDGASKGNPGQAGAGAVLRAHDGS-VICRLREGLGIATNNVAEYRAILLGLKFALKKG 299
           +E DG S+GNPG AG GAV+   D S V+   ++ +G ATNNVAEYR ++ GL  A+K G
Sbjct: 5   IEADGGSRGNPGPAGYGAVVWTADHSTVLAESKQAIGRATNNVAEYRGLIAGLDDAVKLG 64

Query: 300 FTRIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNHVLRHLNSEADA 359
            T   V  DSKLV  Q+ G WK K+ ++ +L  +   L ++F       V R  N+ AD 
Sbjct: 65  ATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPRARNTYADR 124

Query: 360 QANLALTLA 368
            AN A+  A
Sbjct: 125 LANDAMDAA 133

[Close]

BLAST of MELO3C002906 vs. Swiss-Prot
Match: Y2253_MYCBO (Uncharacterized protein Mb2253c OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=Mb2253c PE=3 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.9e-17
Identity = 55/129 (42.64%), Postives = 73/129 (56.59%), Query Frame = 1


Query: 240 LEFDGASKGNPGQAGAGAVLRAHDGS-VICRLREGLGIATNNVAEYRAILLGLKFALKKG 299
           +E DG S+GNPG AG GAV+   D S V+   ++ +G ATNNVAEYR ++ GL  A+K G
Sbjct: 5   IEADGGSRGNPGPAGYGAVVWTADHSTVLAESKQAIGRATNNVAEYRGLIAGLDDAVKLG 64

Query: 300 FTRIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNHVLRHLNSEADA 359
            T   V  DSKLV  Q+ G WK K+ ++ +L  +   L ++F       V R  N+ AD 
Sbjct: 65  ATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPRARNTYADR 124

Query: 360 QANLALTLA 368
            AN A+  A
Sbjct: 125 LANDAMDAA 133

[Close]

BLAST of MELO3C002906 vs. Swiss-Prot
Match: Y2228_MYCTO (Uncharacterized protein MT2287 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=MT2287 PE=3 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.9e-17
Identity = 55/129 (42.64%), Postives = 73/129 (56.59%), Query Frame = 1


Query: 240 LEFDGASKGNPGQAGAGAVLRAHDGS-VICRLREGLGIATNNVAEYRAILLGLKFALKKG 299
           +E DG S+GNPG AG GAV+   D S V+   ++ +G ATNNVAEYR ++ GL  A+K G
Sbjct: 5   IEADGGSRGNPGPAGYGAVVWTADHSTVLAESKQAIGRATNNVAEYRGLIAGLDDAVKLG 64

Query: 300 FTRIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNHVLRHLNSEADA 359
            T   V  DSKLV  Q+ G WK K+ ++ +L  +   L ++F       V R  N+ AD 
Sbjct: 65  ATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPRARNTYADR 124

Query: 360 QANLALTLA 368
            AN A+  A
Sbjct: 125 LANDAMDAA 133

[Close]

BLAST of MELO3C002906 vs. Swiss-Prot
Match: RNH_HALSA (Ribonuclease HI OS=Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) GN=rnhA PE=1 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 1.2e-16
Identity = 50/123 (40.65%), Postives = 67/123 (54.47%), Query Frame = 1


Query: 242 FDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKFALKKGFTR 301
           FDGAS+GNPG A  G VL + DG ++    + +G ATNN AEY A++  L+ A   GF  
Sbjct: 74  FDGASRGNPGPAAVGWVLVSGDGGIVAEGGDTIGRATNNQAEYDALIAALEAAADFGFDD 133

Query: 302 IHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNHVLRHLNSEADAQAN 361
           I ++GDS+LV  Q+ G W   + ++        +L   F  + + HV R  N  ADA AN
Sbjct: 134 IELRGDSQLVEKQLTGAWDTNDPDLRRKRVRARELLTGFDDWSITHVPRATNERADALAN 193

Query: 362 LAL 365
            AL
Sbjct: 194 EAL 196

[Close]

BLAST of MELO3C002906 vs. Swiss-Prot
Match: RNHL_BACSU (14.7 kDa ribonuclease H-like protein OS=Bacillus subtilis (strain 168) GN=rnhA PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.8e-07
Identity = 38/124 (30.65%), Postives = 59/124 (47.58%), Query Frame = 1


Query: 243 DGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKFALKKGFTRI 302
           DGAS GNPG +G G  ++ H+G         +G+ TN  AE+ A++ G+K    +G+  +
Sbjct: 8   DGASAGNPGPSGIGIFIK-HEGKAES-FSIPIGVHTNQEAEFLALIEGMKLCATRGYQSV 67

Query: 303 HVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNHVLRHLNSEADAQANL 362
             + DS +V  +   L   KN        E+++LK  F  F +  +    N +AD  A  
Sbjct: 68  SFRTDSDIV-ERATELEMVKNITFQPFVEEIIRLKAAFPLFFIKWIPGKQNQKADLLAKE 127

Query: 363 ALTL 367
           A+ L
Sbjct: 128 AIRL 128

[Close]

BLAST of MELO3C002906 vs. TrEMBL
Match: A0A0A0KTZ9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G489310 PE=4 SV=1)

HSP 1 Score: 688.7 bits (1776), Expect = 3.9e-195
Identity = 346/378 (91.53%), Postives = 358/378 (94.71%), Query Frame = 1


Query: 1   MNCLSQVSTYTRVIFRRTNLVFAASTSIHGCSNPYWSSTFHNVAVKATALDSLCSRFGLR 60
           MNC SQVSTYTRVIFRRTNLVFAASTSIHGCSN YW+S+FHNVAVK TALDSLCSRFGLR
Sbjct: 1   MNCFSQVSTYTRVIFRRTNLVFAASTSIHGCSNAYWTSSFHNVAVKTTALDSLCSRFGLR 60

Query: 61  CYSTRKPRKPRKPTSPSPKLDSEPPMESEMGDFFVVRKGDVVGVYKSFSDCHAQIGSSIC 120
           CYSTRKPRKPRKPTSPSPKLDSEPP+ESEMGDFFVVRKGDVVGVYKSFSDC AQIGSSIC
Sbjct: 61  CYSTRKPRKPRKPTSPSPKLDSEPPVESEMGDFFVVRKGDVVGVYKSFSDCQAQIGSSIC 120

Query: 121 DLPVSVFKGHSLPKDSEEYLASIGLKNALYTIKAADMRPDLFGSLVPCTFHDGDASLTGE 180
           DLPVSVFKGHSLPKD+EEYLAS+GLKNALYTIKAADMRPDLFGSL PCTFH GD SLTGE
Sbjct: 121 DLPVSVFKGHSLPKDTEEYLASVGLKNALYTIKAADMRPDLFGSLAPCTFHGGDTSLTGE 180

Query: 181 TSGQDAIKKRSREAIVSENVGSSVLTPTSVTPTSEDPTRKHIKLEDSIV--SLSSNHESC 240
           TSGQDAIKKRSREAIV ENVGS+VL     TPT +DPTRKHIKLEDSIV  S+SSN ESC
Sbjct: 181 TSGQDAIKKRSREAIVPENVGSTVL-----TPTLKDPTRKHIKLEDSIVSHSVSSNRESC 240

Query: 241 FLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKFALKKG 300
           FLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLK ALKKG
Sbjct: 241 FLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKSALKKG 300

Query: 301 FTRIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNHVLRHLNSEADA 360
           FTRIHVQGDSKLVCMQVQGLWKAK+EN+SELCNEV KLKNKFLSFEVNHVLRHLNSEADA
Sbjct: 301 FTRIHVQGDSKLVCMQVQGLWKAKHENMSELCNEVTKLKNKFLSFEVNHVLRHLNSEADA 360

Query: 361 QANLALTLADGEIQESED 377
           QANLALTLA+GE+QE ED
Sbjct: 361 QANLALTLAEGEVQEFED 373

[Close]

BLAST of MELO3C002906 vs. TrEMBL
Match: A0A061E5R3_THECC (RNase H family protein, putative isoform 2 OS=Theobroma cacao GN=TCM_010210 PE=4 SV=1)

HSP 1 Score: 413.3 bits (1061), Expect = 3.2e-112
Identity = 219/374 (58.56%), Postives = 271/374 (72.46%), Query Frame = 1


Query: 1   MNCLSQVSTYTRVIFRRTNLVFAASTSIHGCSNPYWSSTFHNVAVKATALDSLCSRFGLR 60
           MNCLS V  Y   IFR+T      ST  + C  P W   F +  VK   L+ L +RF  +
Sbjct: 1   MNCLSHVRAYGSAIFRKTGHFIETSTC-NQCRFPSWKRNFQHAGVKTVDLEFLLTRFHAQ 60

Query: 61  CYSTRKPRKPRKPTSPSPKLDSEPPMESEMGDFFVVRKGDVVGVYKSFSDCHAQIGSSIC 120
           CYS RK    +K    + K+D EP ME+E   F+VVRKGDVVGVYKSF+DC AQ+G SIC
Sbjct: 61  CYSARKSSSGKKAPR-TKKVDPEPVMENEKDAFYVVRKGDVVGVYKSFADCRAQVGPSIC 120

Query: 121 DLPVSVFKGHSLPKDSEEYLASIGLKNALYTIKAADMRPDLFGSLVPCTFHDGDASLTGE 180
           D PVSV+KG+SL KD++EYL S GLKNALYT++AAD++ DLFG L+PC+F +  AS  GE
Sbjct: 121 DPPVSVYKGYSLTKDTKEYLVSCGLKNALYTVRAADVKEDLFGLLMPCSFQE-PASSKGE 180

Query: 181 TSGQDAIKKRSREAIVSENVGSSVLTPTSVTPTSEDPTRKHIKLED-SIVSLSSNHESCF 240
           TS  DA KKRS++ + SE  G   L   +V     DP  KHIKL+  + V ++S++ SC 
Sbjct: 181 TSHMDAAKKRSQDMLKSEYGGLGALGSIAVA----DPVSKHIKLDPYAEVQIASSNCSCI 240

Query: 241 LEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKFALKKGF 300
           LEFDGASKGNPG AGA AVLR   G VIC+LREGLGIAT N AEYRA++LGLK AL+KG+
Sbjct: 241 LEFDGASKGNPGPAGAAAVLRTDTGKVICKLREGLGIATCNAAEYRAVILGLKHALRKGY 300

Query: 301 TRIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNHVLRHLNSEADAQ 360
           + I V+GDSKLVCMQ+QGLWK K+E++SEL  +  KLKNKFLSF++NHVLR LN+EADAQ
Sbjct: 301 SSICVRGDSKLVCMQMQGLWKVKHEHMSELYEQAKKLKNKFLSFQINHVLRELNAEADAQ 360

Query: 361 ANLALTLADGEIQE 374
           ANLA+ LA+G+IQE
Sbjct: 361 ANLAVNLAEGQIQE 367

[Close]

BLAST of MELO3C002906 vs. TrEMBL
Match: A0A0B0MTD0_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_25913 PE=4 SV=1)

HSP 1 Score: 412.9 bits (1060), Expect = 4.1e-112
Identity = 217/377 (57.56%), Postives = 272/377 (72.15%), Query Frame = 1


Query: 1   MNCLSQVSTYTRVIFRRTNLVFAASTSIHGCSNPYWSSTFHNVAVKATALDSLCSRFGLR 60
           MNC   V TY   +FR+       STS++ C  P W   F + +VK   L+ L +RF  +
Sbjct: 1   MNCPPHVQTYGSALFRKAGNFI--STSLNQCHVPLWKRNFEHASVKIVDLEFLLTRFRTQ 60

Query: 61  CYSTRKPRKPRKPTSPSPKLDSEPP--MESEMGDFFVVRKGDVVGVYKSFSDCHAQIGSS 120
           CYS+RK     K TS + K+D E P  ME+E   FFVVRKGDVVGV+KSF+DC  Q+GSS
Sbjct: 61  CYSSRKSSSSTKKTSRTKKVDPEQPKVMENEKDAFFVVRKGDVVGVFKSFADCQTQVGSS 120

Query: 121 ICDLPVSVFKGHSLPKDSEEYLASIGLKNALYTIKAADMRPDLFGSLVPCTFHDGDASLT 180
           ICD PVSV+KG+SL K++E YL+S GLKNA YTI+AAD++ D+FG+L+PC F +  AS  
Sbjct: 121 ICDPPVSVYKGYSLTKETEIYLSSYGLKNARYTIRAADVKEDIFGALMPCPFQE-PASSK 180

Query: 181 GETSGQDAIKKRSREAIVSENVGSSVLTPTSVTPTSEDPTRKHIKLEDSIVS--LSSNHE 240
           GETS  DA KKR ++ + SE  G   L   +V     DP RKH KL+    +   SS H+
Sbjct: 181 GETSHNDATKKRPQDMLQSEYGGLGSLGSIAVA----DPVRKHFKLDPHAEAQITSSGHQ 240

Query: 241 SCFLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKFALK 300
           SC LEFDGASKGNPG AGA AVL+   G+VIC+LREGLGIATNN AEYRAI+LGLK AL+
Sbjct: 241 SCILEFDGASKGNPGPAGAAAVLKTDAGNVICKLREGLGIATNNAAEYRAIILGLKHALR 300

Query: 301 KGFTRIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNHVLRHLNSEA 360
           KG+T I V+GDSKLVCMQ+QGLWK K+E++SEL  + +KLK+KFLSF++NHVLR LN EA
Sbjct: 301 KGYTNIRVRGDSKLVCMQLQGLWKVKHEHMSELYEQAMKLKDKFLSFQINHVLRELNGEA 360

Query: 361 DAQANLALTLADGEIQE 374
           DA+ANLA+ LA+G+IQE
Sbjct: 361 DAEANLAVKLAEGQIQE 370

[Close]

BLAST of MELO3C002906 vs. TrEMBL
Match: A0A0D2SDN8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G350100 PE=4 SV=1)

HSP 1 Score: 410.2 bits (1053), Expect = 2.7e-111
Identity = 215/378 (56.88%), Postives = 274/378 (72.49%), Query Frame = 1


Query: 1   MNCLSQVSTYTRVIFRRTNLVFAASTSIHGCSNPYWSSTFHNVAVKATALDSLCSRFGLR 60
           MNCL  +  Y   +FR+T      STS++ C  P W   F + +VK   L+ L +RF  +
Sbjct: 1   MNCLPHMHAYGSALFRKTGNFI--STSLNQCHVPLWKRNFEDASVKTVDLEFLLTRFRTQ 60

Query: 61  CYSTRKPRKPRKPTSPSPKLDSEPP--MESEMGDFFVVRKGDVVGVYKSFSDCHAQIGSS 120
           CYS+RK     K TS + K+D E P  ME+E   FFVVRKGDVVGV+KSF+DC  Q+GSS
Sbjct: 61  CYSSRKSSSSTKKTSGTKKVDPEQPQVMENEKDAFFVVRKGDVVGVFKSFADCQTQVGSS 120

Query: 121 ICDLPVSVFKGHSLPKDSEEYLASIGLKNALYTIKAADMRPDLFGSLVPCTFHDGDASLT 180
           ICD PVSV+KG++L K++E YL+S GLKNA YTI+AAD++ D+FG+L+PC F +  AS  
Sbjct: 121 ICDPPVSVYKGYALTKETEIYLSSYGLKNARYTIRAADVKEDIFGALMPCPFQE-PASSK 180

Query: 181 GETSGQDAIKKRSREAIVSE-NVGSSVLTPTSVTPTSEDPTRKHIKLEDSIVS--LSSNH 240
           GETS  DA KKR ++ +  E  VG   L   +V     D  RKH+KL+    +   SS H
Sbjct: 181 GETSHYDATKKRPQDMLQLEYGVGLGSLGSIAVA----DLARKHVKLDPHAEAQITSSGH 240

Query: 241 ESCFLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKFAL 300
           +SC LEFDGASKGNPG AGA AVL+   G+VIC+LREGLGIATNN AEYRA++LGLK AL
Sbjct: 241 QSCTLEFDGASKGNPGPAGAAAVLKTDAGNVICKLREGLGIATNNAAEYRALILGLKHAL 300

Query: 301 KKGFTRIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNHVLRHLNSE 360
           +KG+T IHV+GDSKLVCMQ+QGLWK K+E++SELC + +KLK+KFLSF++NHVLR LN  
Sbjct: 301 RKGYTNIHVRGDSKLVCMQLQGLWKVKHEHMSELCEQAMKLKDKFLSFQINHVLRELNGA 360

Query: 361 ADAQANLALTLADGEIQE 374
           ADA+ANLA+ LA+G+IQE
Sbjct: 361 ADAEANLAVKLAEGQIQE 371

[Close]

BLAST of MELO3C002906 vs. TrEMBL
Match: A0A0D2RNX8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G185700 PE=4 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 5.6e-109
Identity = 216/378 (57.14%), Postives = 271/378 (71.69%), Query Frame = 1


Query: 1   MNCLSQVSTYTRVIFRRTNLVFAASTSIHGCSNPYWSSTFHNVAVKATALDSLCSRFGLR 60
           MNCL  V  Y   +FR+    F A+TS++ C  P W   F +  VK   L+ L +RF  +
Sbjct: 1   MNCLPHVRAYGSALFRKAGN-FIATTSLNQCHVPLWRRNFEHAGVKTVDLEFLLTRFRTQ 60

Query: 61  CYSTRKPRKPR--KPTSPSPKLDSEPP--MESEMGDFFVVRKGDVVGVYKSFSDCHAQIG 120
           CYS+RK +     K  S + K+  E P  ME+E   FFVVRKGD VGV+KSF+DC AQ+G
Sbjct: 61  CYSSRKSKSSSSTKKASRTKKVHPEQPPVMENEKDAFFVVRKGDTVGVFKSFADCQAQVG 120

Query: 121 SSICDLPVSVFKGHSLPKDSEEYLASIGLKNALYTIKAADMRPDLFGSLVPCTFHDGDAS 180
           SSICD PVSV+KG+SL K++E YL+S GLKNALYTI+AAD++ DLFG+L+PC F +  AS
Sbjct: 121 SSICDPPVSVYKGYSLTKETEIYLSSCGLKNALYTIRAADVKEDLFGALMPCPFQE-PAS 180

Query: 181 LTGETSGQDAIKKRSREAIVSENVGSSVLTPTSVTPTSEDPTRKHIKLEDSIVS--LSSN 240
             GETS  DA KKR ++ + SE  G   L   +V     DP RKH KL+    +   SS 
Sbjct: 181 SKGETSHNDATKKRPQDMLQSEYGGLGSLGSIAVA----DPVRKHFKLDPHAEAQITSSG 240

Query: 241 HESCFLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKFA 300
           H+SC LEFDGASKGNPG AGA AVL+   G+VIC+LREGLGIATNN AEYRAI+LGLK A
Sbjct: 241 HQSCILEFDGASKGNPGPAGAAAVLKTDSGNVICKLREGLGIATNNAAEYRAIILGLKQA 300

Query: 301 LKKGFTRIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNHVLRHLNS 360
           L+KG+T I V+GDSKLVCMQ+QGLWK K+E++SEL  + +KLK+KFLSF++NHVLR LN 
Sbjct: 301 LRKGYTNIRVRGDSKLVCMQLQGLWKVKHEHMSELYEQAMKLKDKFLSFQINHVLRELNG 360

Query: 361 EADAQANLALTLADGEIQ 373
           EADA+ANLA+ LA GE++
Sbjct: 361 EADAEANLAVKLA-GEVK 371

[Close]

BLAST of MELO3C002906 vs. TAIR10
Match: AT1G24090.1 (AT1G24090.1 RNase H family protein)

HSP 1 Score: 305.4 bits (781), Expect = 4.7e-83
Identity = 165/377 (43.77%), Postives = 239/377 (63.40%), Query Frame = 1


Query: 1   MNCLSQVSTYTRV-IFRRTNLVFAASTSIHGCSNPYWSSTFHNV----AVKATALDSLCS 60
           MNCLS   +Y  + + +R++ V          S+  W+  F  +     +K  A+ S+  
Sbjct: 1   MNCLSHARSYIALGLLKRSSYV----------SSIPWNECFFYMPSKSCLKPVAVSSVFG 60

Query: 61  RFGLRCYSTRKPRKPRKPTSPSPKLDSEPPMESEMGDFFVVRKGDVVGVYKSFSDCHAQI 120
              +  YS+R      K  S +        ++ E   FFVVRKGDV+G+YK  SDC AQ+
Sbjct: 61  ICSVHSYSSRSKAVKSKMLSSTVV----SAVDKEKDAFFVVRKGDVIGIYKDLSDCQAQV 120

Query: 121 GSSICDLPVSVFKGHSLPKDSEEYLASIGLKNALYTIKAADMRPDLFGSLVPCTFHDGDA 180
           GSS+ DLPVSV+KG+SLPKD+EEYL+S+GLK  LY+++A+D++ D+FG+L PC F +   
Sbjct: 121 GSSVFDLPVSVYKGYSLPKDTEEYLSSVGLKKPLYSLRASDLKDDMFGALTPCLFQEPAP 180

Query: 181 SLTGETSGQDAIKKRSREAIVSENVGSSVLTPTSVTPTSEDPTRKHIKLEDSIVSLSSNH 240
                +  +   + +S++    +   +S+         S DP  K  K+E S      + 
Sbjct: 181 CTVKVSEDETTSETKSKDDKKDQLPSASI---------SYDPLEKLSKVEPSAYI---SD 240

Query: 241 ESCFLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKFAL 300
           E+CF+EFDGASKGNPG +GA AVL+  DGS+ICR+R+GLGIATNN AEY A++LGLK+A+
Sbjct: 241 ETCFIEFDGASKGNPGLSGAAAVLKTEDGSLICRVRQGLGIATNNAAEYHALILGLKYAI 300

Query: 301 KKGFTRIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNHVLRHLNSE 360
           +KG+  I V+GDSKLVCMQ++G WK  +E +++L  E   L NK +SFE++HVLR+LN++
Sbjct: 301 EKGYKNIKVKGDSKLVCMQIKGQWKVNHEVLAKLHKEAKLLCNKCVSFEISHVLRNLNAD 351

Query: 361 ADAQANLALTLADGEIQ 373
           AD QANLA+ L +GE++
Sbjct: 361 ADEQANLAVRLPEGEVE 351

[Close]

BLAST of MELO3C002906 vs. TAIR10
Match: AT3G01410.1 (AT3G01410.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 269.6 bits (688), Expect = 2.9e-72
Identity = 138/289 (47.75%), Postives = 190/289 (65.74%), Query Frame = 1


Query: 86  MESEMGDFFVVRKGDVVGVYKSFSDCHAQIGSSICDLPVSVFKGHSLPKDSEEYLASIGL 145
           ME E   F++VRKGD++GVY+S S+C  Q GSS+    +SV+KG+  PK +E+ L+S G+
Sbjct: 5   MEDEKDAFYIVRKGDIIGVYRSLSECQGQAGSSVSHPAMSVYKGYGWPKGAEDLLSSFGI 64

Query: 146 KNALYTIKAADMRPDLFGSLVPCTFHDGDASLTGETSGQDAIKKRSREAIVSENVGSSVL 205
           KNAL+++ A+ ++ D FG L+PC      +S  GE+  + +  KR ++    E+   S  
Sbjct: 65  KNALFSVNASHVKDDAFGKLIPCPVQQPSSS-QGESLNKSSPSKRLQDMGSGESGSFSPS 124

Query: 206 TPTSVTPTSEDPTRKHIKLEDSIVSLSS--NHESCFLEFDGASKGNPGQAGAGAVLRAHD 265
            P        D  R+   +  S+++ +    ++SC +EFDGASKGNPG+AGAGAVLRA D
Sbjct: 125 PPQKQLKIENDMLRR---IPSSLLTRTPIRQNDSCTIEFDGASKGNPGKAGAGAVLRASD 184

Query: 266 GSVICRLREGLGIATNNVAEYRAILLGLKFALKKGFTRIHVQGDSKLVCMQVQGLWKAKN 325
            SV+  LREG+G ATNNVAEYRA+LLGL+ AL KGF  +HV GDS LVCMQVQG WK  +
Sbjct: 185 NSVLFYLREGVGNATNNVAEYRALLLGLRSALDKGFKNVHVLGDSMLVCMQVQGAWKTNH 244

Query: 326 ENISELCNEVVKLKNKFLSFEVNHVLRHLNSEADAQANLALTLADGEIQ 373
             ++ELC +  +L N F +F++ H+ R  NSEAD QAN A+ LADG+ Q
Sbjct: 245 PKMAELCKQAKELMNSFKTFDIKHIAREKNSEADKQANSAIFLADGQTQ 289

[Close]

BLAST of MELO3C002906 vs. TAIR10
Match: AT5G51080.1 (AT5G51080.1 RNase H family protein)

HSP 1 Score: 178.3 bits (451), Expect = 8.7e-45
Identity = 84/150 (56.00%), Postives = 116/150 (77.33%), Query Frame = 1


Query: 223 KLEDSIVSLSSNHESCFLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVA 282
           KL +   S  +++E+C +EFDGASKGNPG +GA AVL+  DGS+I ++R+GLGIATNN A
Sbjct: 171 KLAELEPSADTSYETCIIEFDGASKGNPGLSGAAAVLKTEDGSLIFKMRQGLGIATNNAA 230

Query: 283 EYRAILLGLKFALKKGFTRIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLS 342
           EY  ++LGLK A++KG+T+I V+ DSKLVCMQ++G WK  +E +S+L  E  +L +K LS
Sbjct: 231 EYHGLILGLKHAIEKGYTKIKVKTDSKLVCMQMKGQWKVNHEVLSKLHKEAKQLSDKCLS 290

Query: 343 FEVNHVLRHLNSEADAQANLALTLADGEIQ 373
           FE++HVLR LNS+AD QAN+A  L++GE++
Sbjct: 291 FEISHVLRSLNSDADEQANMAARLSEGEVE 320

HSP 2 Score: 123.2 bits (308), Expect = 3.3e-28
Identity = 68/173 (39.31%), Postives = 101/173 (58.38%), Query Frame = 1


Query: 1   MNCLSQVSTY-TRVIFRRTNLVFAASTSIHGCSNPYWSSTFHNVAVKATALDSLCSRFGL 60
           MN  S+  +Y + V+FR+++ V          S+  W+  F+  ++K++   +  S   +
Sbjct: 1   MNRFSRARSYISLVLFRKSSYV---------TSHIPWNQCFYT-SLKSSLKPASVSVSSV 60

Query: 61  RCYSTRKPRKPRKPTSPSPKLDSEPPMESEMGDFFVVRKGDVVGVYKSFSDCHAQIGSSI 120
            CYS+R      K +  S  +      + E   FFVVRKGD+VG+YK   DC AQ+GSS+
Sbjct: 61  HCYSSRSKTAKSKMSKSSVSVSDS---DKEKDAFFVVRKGDIVGIYKDLIDCQAQVGSSV 120

Query: 121 CDLPVSVFKGHSLPKDSEEYLASIGLKNALYTIKAADMRPDLFGSLVPCTFHD 173
            D PVSV+KG+SL KD+EE L+++GLK  LY  +A D++ D+FG+L PC F D
Sbjct: 121 YDPPVSVYKGYSLLKDTEECLSTVGLKKPLYVFRALDLKEDMFGALTPCLFQD 160

[Close]

BLAST of MELO3C002906 vs. NCBI nr
Match: gi|659131431|ref|XP_008465682.1| (PREDICTED: uncharacterized protein LOC103503315 isoform X1 [Cucumis melo])

HSP 1 Score: 753.4 bits (1944), Expect = 1.9e-214
Identity = 376/376 (100.00%), Postives = 376/376 (100.00%), Query Frame = 1


Query: 1   MNCLSQVSTYTRVIFRRTNLVFAASTSIHGCSNPYWSSTFHNVAVKATALDSLCSRFGLR 60
           MNCLSQVSTYTRVIFRRTNLVFAASTSIHGCSNPYWSSTFHNVAVKATALDSLCSRFGLR
Sbjct: 1   MNCLSQVSTYTRVIFRRTNLVFAASTSIHGCSNPYWSSTFHNVAVKATALDSLCSRFGLR 60

Query: 61  CYSTRKPRKPRKPTSPSPKLDSEPPMESEMGDFFVVRKGDVVGVYKSFSDCHAQIGSSIC 120
           CYSTRKPRKPRKPTSPSPKLDSEPPMESEMGDFFVVRKGDVVGVYKSFSDCHAQIGSSIC
Sbjct: 61  CYSTRKPRKPRKPTSPSPKLDSEPPMESEMGDFFVVRKGDVVGVYKSFSDCHAQIGSSIC 120

Query: 121 DLPVSVFKGHSLPKDSEEYLASIGLKNALYTIKAADMRPDLFGSLVPCTFHDGDASLTGE 180
           DLPVSVFKGHSLPKDSEEYLASIGLKNALYTIKAADMRPDLFGSLVPCTFHDGDASLTGE
Sbjct: 121 DLPVSVFKGHSLPKDSEEYLASIGLKNALYTIKAADMRPDLFGSLVPCTFHDGDASLTGE 180

Query: 181 TSGQDAIKKRSREAIVSENVGSSVLTPTSVTPTSEDPTRKHIKLEDSIVSLSSNHESCFL 240
           TSGQDAIKKRSREAIVSENVGSSVLTPTSVTPTSEDPTRKHIKLEDSIVSLSSNHESCFL
Sbjct: 181 TSGQDAIKKRSREAIVSENVGSSVLTPTSVTPTSEDPTRKHIKLEDSIVSLSSNHESCFL 240

Query: 241 EFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKFALKKGFT 300
           EFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKFALKKGFT
Sbjct: 241 EFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKFALKKGFT 300

Query: 301 RIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNHVLRHLNSEADAQA 360
           RIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNHVLRHLNSEADAQA
Sbjct: 301 RIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNHVLRHLNSEADAQA 360

Query: 361 NLALTLADGEIQESED 377
           NLALTLADGEIQESED
Sbjct: 361 NLALTLADGEIQESED 376

[Close]

BLAST of MELO3C002906 vs. NCBI nr
Match: gi|659131435|ref|XP_008465684.1| (PREDICTED: uncharacterized protein LOC103503315 isoform X3 [Cucumis melo])

HSP 1 Score: 704.5 bits (1817), Expect = 9.9e-200
Identity = 350/350 (100.00%), Postives = 350/350 (100.00%), Query Frame = 1


Query: 1   MNCLSQVSTYTRVIFRRTNLVFAASTSIHGCSNPYWSSTFHNVAVKATALDSLCSRFGLR 60
           MNCLSQVSTYTRVIFRRTNLVFAASTSIHGCSNPYWSSTFHNVAVKATALDSLCSRFGLR
Sbjct: 1   MNCLSQVSTYTRVIFRRTNLVFAASTSIHGCSNPYWSSTFHNVAVKATALDSLCSRFGLR 60

Query: 61  CYSTRKPRKPRKPTSPSPKLDSEPPMESEMGDFFVVRKGDVVGVYKSFSDCHAQIGSSIC 120
           CYSTRKPRKPRKPTSPSPKLDSEPPMESEMGDFFVVRKGDVVGVYKSFSDCHAQIGSSIC
Sbjct: 61  CYSTRKPRKPRKPTSPSPKLDSEPPMESEMGDFFVVRKGDVVGVYKSFSDCHAQIGSSIC 120

Query: 121 DLPVSVFKGHSLPKDSEEYLASIGLKNALYTIKAADMRPDLFGSLVPCTFHDGDASLTGE 180
           DLPVSVFKGHSLPKDSEEYLASIGLKNALYTIKAADMRPDLFGSLVPCTFHDGDASLTGE
Sbjct: 121 DLPVSVFKGHSLPKDSEEYLASIGLKNALYTIKAADMRPDLFGSLVPCTFHDGDASLTGE 180

Query: 181 TSGQDAIKKRSREAIVSENVGSSVLTPTSVTPTSEDPTRKHIKLEDSIVSLSSNHESCFL 240
           TSGQDAIKKRSREAIVSENVGSSVLTPTSVTPTSEDPTRKHIKLEDSIVSLSSNHESCFL
Sbjct: 181 TSGQDAIKKRSREAIVSENVGSSVLTPTSVTPTSEDPTRKHIKLEDSIVSLSSNHESCFL 240

Query: 241 EFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKFALKKGFT 300
           EFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKFALKKGFT
Sbjct: 241 EFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKFALKKGFT 300

Query: 301 RIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNHVLR 351
           RIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNHVLR
Sbjct: 301 RIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNHVLR 350

[Close]

BLAST of MELO3C002906 vs. NCBI nr
Match: gi|659131433|ref|XP_008465683.1| (PREDICTED: uncharacterized protein LOC103503315 isoform X2 [Cucumis melo])

HSP 1 Score: 704.5 bits (1817), Expect = 9.9e-200
Identity = 350/350 (100.00%), Postives = 350/350 (100.00%), Query Frame = 1


Query: 1   MNCLSQVSTYTRVIFRRTNLVFAASTSIHGCSNPYWSSTFHNVAVKATALDSLCSRFGLR 60
           MNCLSQVSTYTRVIFRRTNLVFAASTSIHGCSNPYWSSTFHNVAVKATALDSLCSRFGLR
Sbjct: 1   MNCLSQVSTYTRVIFRRTNLVFAASTSIHGCSNPYWSSTFHNVAVKATALDSLCSRFGLR 60

Query: 61  CYSTRKPRKPRKPTSPSPKLDSEPPMESEMGDFFVVRKGDVVGVYKSFSDCHAQIGSSIC 120
           CYSTRKPRKPRKPTSPSPKLDSEPPMESEMGDFFVVRKGDVVGVYKSFSDCHAQIGSSIC
Sbjct: 61  CYSTRKPRKPRKPTSPSPKLDSEPPMESEMGDFFVVRKGDVVGVYKSFSDCHAQIGSSIC 120

Query: 121 DLPVSVFKGHSLPKDSEEYLASIGLKNALYTIKAADMRPDLFGSLVPCTFHDGDASLTGE 180
           DLPVSVFKGHSLPKDSEEYLASIGLKNALYTIKAADMRPDLFGSLVPCTFHDGDASLTGE
Sbjct: 121 DLPVSVFKGHSLPKDSEEYLASIGLKNALYTIKAADMRPDLFGSLVPCTFHDGDASLTGE 180

Query: 181 TSGQDAIKKRSREAIVSENVGSSVLTPTSVTPTSEDPTRKHIKLEDSIVSLSSNHESCFL 240
           TSGQDAIKKRSREAIVSENVGSSVLTPTSVTPTSEDPTRKHIKLEDSIVSLSSNHESCFL
Sbjct: 181 TSGQDAIKKRSREAIVSENVGSSVLTPTSVTPTSEDPTRKHIKLEDSIVSLSSNHESCFL 240

Query: 241 EFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKFALKKGFT 300
           EFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKFALKKGFT
Sbjct: 241 EFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKFALKKGFT 300

Query: 301 RIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNHVLR 351
           RIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNHVLR
Sbjct: 301 RIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNHVLR 350

[Close]

BLAST of MELO3C002906 vs. NCBI nr
Match: gi|449452100|ref|XP_004143798.1| (PREDICTED: uncharacterized protein LOC101210930 isoform X1 [Cucumis sativus])

HSP 1 Score: 688.7 bits (1776), Expect = 5.6e-195
Identity = 346/378 (91.53%), Postives = 358/378 (94.71%), Query Frame = 1


Query: 1   MNCLSQVSTYTRVIFRRTNLVFAASTSIHGCSNPYWSSTFHNVAVKATALDSLCSRFGLR 60
           MNC SQVSTYTRVIFRRTNLVFAASTSIHGCSN YW+S+FHNVAVK TALDSLCSRFGLR
Sbjct: 1   MNCFSQVSTYTRVIFRRTNLVFAASTSIHGCSNAYWTSSFHNVAVKTTALDSLCSRFGLR 60

Query: 61  CYSTRKPRKPRKPTSPSPKLDSEPPMESEMGDFFVVRKGDVVGVYKSFSDCHAQIGSSIC 120
           CYSTRKPRKPRKPTSPSPKLDSEPP+ESEMGDFFVVRKGDVVGVYKSFSDC AQIGSSIC
Sbjct: 61  CYSTRKPRKPRKPTSPSPKLDSEPPVESEMGDFFVVRKGDVVGVYKSFSDCQAQIGSSIC 120

Query: 121 DLPVSVFKGHSLPKDSEEYLASIGLKNALYTIKAADMRPDLFGSLVPCTFHDGDASLTGE 180
           DLPVSVFKGHSLPKD+EEYLAS+GLKNALYTIKAADMRPDLFGSL PCTFH GD SLTGE
Sbjct: 121 DLPVSVFKGHSLPKDTEEYLASVGLKNALYTIKAADMRPDLFGSLAPCTFHGGDTSLTGE 180

Query: 181 TSGQDAIKKRSREAIVSENVGSSVLTPTSVTPTSEDPTRKHIKLEDSIV--SLSSNHESC 240
           TSGQDAIKKRSREAIV ENVGS+VL     TPT +DPTRKHIKLEDSIV  S+SSN ESC
Sbjct: 181 TSGQDAIKKRSREAIVPENVGSTVL-----TPTLKDPTRKHIKLEDSIVSHSVSSNRESC 240

Query: 241 FLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKFALKKG 300
           FLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLK ALKKG
Sbjct: 241 FLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKSALKKG 300

Query: 301 FTRIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNHVLRHLNSEADA 360
           FTRIHVQGDSKLVCMQVQGLWKAK+EN+SELCNEV KLKNKFLSFEVNHVLRHLNSEADA
Sbjct: 301 FTRIHVQGDSKLVCMQVQGLWKAKHENMSELCNEVTKLKNKFLSFEVNHVLRHLNSEADA 360

Query: 361 QANLALTLADGEIQESED 377
           QANLALTLA+GE+QE ED
Sbjct: 361 QANLALTLAEGEVQEFED 373

[Close]

BLAST of MELO3C002906 vs. NCBI nr
Match: gi|778703066|ref|XP_011655308.1| (PREDICTED: uncharacterized protein LOC101210930 isoform X2 [Cucumis sativus])

HSP 1 Score: 645.2 bits (1663), Expect = 7.1e-182
Identity = 324/354 (91.53%), Postives = 334/354 (94.35%), Query Frame = 1


Query: 1   MNCLSQVSTYTRVIFRRTNLVFAASTSIHGCSNPYWSSTFHNVAVKATALDSLCSRFGLR 60
           MNC SQVSTYTRVIFRRTNLVFAASTSIHGCSN YW+S+FHNVAVK TALDSLCSRFGLR
Sbjct: 1   MNCFSQVSTYTRVIFRRTNLVFAASTSIHGCSNAYWTSSFHNVAVKTTALDSLCSRFGLR 60

Query: 61  CYSTRKPRKPRKPTSPSPKLDSEPPMESEMGDFFVVRKGDVVGVYKSFSDCHAQIGSSIC 120
           CYSTRKPRKPRKPTSPSPKLDSEPP+ESEMGDFFVVRKGDVVGVYKSFSDC AQIGSSIC
Sbjct: 61  CYSTRKPRKPRKPTSPSPKLDSEPPVESEMGDFFVVRKGDVVGVYKSFSDCQAQIGSSIC 120

Query: 121 DLPVSVFKGHSLPKDSEEYLASIGLKNALYTIKAADMRPDLFGSLVPCTFHDGDASLTGE 180
           DLPVSVFKGHSLPKD+EEYLAS+GLKNALYTIKAADMRPDLFGSL PCTFH GD SLTGE
Sbjct: 121 DLPVSVFKGHSLPKDTEEYLASVGLKNALYTIKAADMRPDLFGSLAPCTFHGGDTSLTGE 180

Query: 181 TSGQDAIKKRSREAIVSENVGSSVLTPTSVTPTSEDPTRKHIKLEDSIV--SLSSNHESC 240
           TSGQDAIKKRSREAIV ENVGS+VL     TPT +DPTRKHIKLEDSIV  S+SSN ESC
Sbjct: 181 TSGQDAIKKRSREAIVPENVGSTVL-----TPTLKDPTRKHIKLEDSIVSHSVSSNRESC 240

Query: 241 FLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKFALKKG 300
           FLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLK ALKKG
Sbjct: 241 FLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKSALKKG 300

Query: 301 FTRIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNHVLRHL 353
           FTRIHVQGDSKLVCMQVQGLWKAK+EN+SELCNEV KLKNKFLSFEVNHVLR L
Sbjct: 301 FTRIHVQGDSKLVCMQVQGLWKAKHENMSELCNEVTKLKNKFLSFEVNHVLRKL 349

The following BLAST results are available for this feature:

BLAST of MELO3C002906 vs. Swiss-Prot


Match Name	E-value	Identity	Description
Y2228_MYCTU	1.9e-17	42.64	Uncharacterized protein Rv2228c OS=Mycobacterium tuberculosis (strain ATCC 25618...	[more]
Y2253_MYCBO	1.9e-17	42.64	Uncharacterized protein Mb2253c OS=Mycobacterium bovis (strain ATCC BAA-935 / AF...	[more]
Y2228_MYCTO	1.9e-17	42.64	Uncharacterized protein MT2287 OS=Mycobacterium tuberculosis (strain CDC 1551 / ...	[more]
RNH_HALSA	1.2e-16	40.65	Ribonuclease HI OS=Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC...	[more]
RNHL_BACSU	1.8e-07	30.65	14.7 kDa ribonuclease H-like protein OS=Bacillus subtilis (strain 168) GN=rnhA P...	[more]

BLAST of MELO3C002906 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KTZ9_CUCSA	3.9e-195	91.53	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G489310 PE=4 SV=1	[more]
A0A061E5R3_THECC	3.2e-112	58.56	RNase H family protein, putative isoform 2 OS=Theobroma cacao GN=TCM_010210 PE=4...	[more]
A0A0B0MTD0_GOSAR	4.1e-112	57.56	Uncharacterized protein OS=Gossypium arboreum GN=F383_25913 PE=4 SV=1	[more]
A0A0D2SDN8_GOSRA	2.7e-111	56.88	Uncharacterized protein OS=Gossypium raimondii GN=B456_009G350100 PE=4 SV=1	[more]
A0A0D2RNX8_GOSRA	5.6e-109	57.14	Uncharacterized protein OS=Gossypium raimondii GN=B456_005G185700 PE=4 SV=1	[more]

BLAST of MELO3C002906 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G24090.1	4.7e-83	43.77	RNase H family protein	[more]
AT3G01410.1	2.9e-72	47.75	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT5G51080.1	8.7e-45	56.00	RNase H family protein	[more]

BLAST of MELO3C002906 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659131431\|ref\|XP_008465682.1\|	1.9e-214	100.00	PREDICTED: uncharacterized protein LOC103503315 isoform X1 [Cucumis melo]	[more]
gi\|659131435\|ref\|XP_008465684.1\|	9.9e-200	100.00	PREDICTED: uncharacterized protein LOC103503315 isoform X3 [Cucumis melo]	[more]
gi\|659131433\|ref\|XP_008465683.1\|	9.9e-200	100.00	PREDICTED: uncharacterized protein LOC103503315 isoform X2 [Cucumis melo]	[more]
gi\|449452100\|ref\|XP_004143798.1\|	5.6e-195	91.53	PREDICTED: uncharacterized protein LOC101210930 isoform X1 [Cucumis sativus]	[more]
gi\|778703066\|ref\|XP_011655308.1\|	7.1e-182	91.53	PREDICTED: uncharacterized protein LOC101210930 isoform X2 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002156	RNaseH_domain
IPR011320	RNase_H1_N
IPR012337	RNaseH-like_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0004523	RNA-DNA hybrid ribonuclease activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051252	regulation of RNA metabolic process
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU52996	melon EST collection version 4.0	transcribed_cluster
MU57904	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C002906T1	MELO3C002906T1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU52996	MU52996	transcribed_cluster
MU57904	MU57904	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002156	Ribonuclease H domain	PROFILE	PS50879	RNASE_H	coord: 234..365 score: 15
IPR011320	Ribonuclease H1, N-terminal	GENE3D	G3DSA:3.40.970.10		coord: 91..141 score: 6.
IPR012337	Ribonuclease H-like domain	GENE3D	G3DSA:3.30.420.10		coord: 241..366 score: 4.5
IPR012337	Ribonuclease H-like domain	unknown	SSF53098	Ribonuclease H-like	coord: 237..361 score: 1.52
None	No IPR available	PANTHER	PTHR33033	FAMILY NOT NAMED	coord: 86..212 score: 5.6E-110coord: 238..375 score: 5.6E
None	No IPR available	PANTHER	PTHR33033:SF11	RNASE H DOMAIN-CONTAINING PROTEIN	coord: 238..375 score: 5.6E-110coord: 86..212 score: 5.6E
None	No IPR available	PFAM	PF13456	RVT_3	coord: 242..363 score: 2.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C002906	Csa5G489310	Cucumber (Chinese Long) v2	cumeB361
MELO3C002906	Cla004748	Watermelon (97103) v1	mewmB003
MELO3C002906	ClCG09G020670	Watermelon (Charleston Gray)	mewcgB002
MELO3C002906	Cla97C09G182090	Watermelon (97103) v2	mewmbB038
MELO3C002906	Bhi06G000551	Wax gourd	mewgoB030
MELO3C002906	CSPI05G16700	Wild cucumber (PI 183967)	cpimeB350
MELO3C002906	CmaCh05G009250	Cucurbita maxima (Rimu)	cmameB716
MELO3C002906	CmoCh05G009200	Cucurbita moschata (Rifu)	cmomeB705
MELO3C002906	Lsi02G017240	Bottle gourd (USVL1VR-Ls)	lsimeB162
MELO3C002906	Cp4.1LG11g07390	Cucurbita pepo (Zucchini)	cpemeB078
MELO3C002906	Carg26435	Silver-seed gourd	carmeB1030
MELO3C002906	CsaV3_5G025720	Cucumber (Chinese Long) v3	cucmeB359

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C002906	Cucumber (Gy14) v1	cgymeB460
MELO3C002906	Cucurbita moschata (Rifu)	cmomeB135
MELO3C002906	Cucurbita pepo (Zucchini)	cpemeB741
MELO3C002906	Cucumber (Gy14) v2	cgybmeB300