Carg26435 (gene) Silver-seed gourd

Overview
NameCarg26435
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionRibonuclease H protein
LocationCucurbita_argyrosperma_scaffold_094 : 201563 .. 206984 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCTGATGAACTGCTTCTCCCAATTCTCTACCTACACTCGCGCCATTTTCAGAACCACCAATCTTGCTTTTGCAGCTTCCACCTCCATTAATGGCTGCCGCGTTAATCTCTACTGGACCTCGAGCTTTCACAGCGTCACTCTTAAACCTACTCCTTTAGACTCCTTGTGTTCCAGATTTCGTCTACGTTGCTACTCCTCTCGAAAACTCCGCAAGGGCGCTTCTCCTTCTCCCAACTTAGATTCTAAACCTCCCATGGAACCAGACATGGGCGACTTCTTTGTCGTTCGGAAGGGGGACGTTGTTGGAGTCTATAAAAGTTTTACCGACTGTCAGGCGCAAATTGGATCTTCGGTATTCATTTCTTTAACTTATGAGTGGTGATTTTTGACAGATTGTTGTCGTTAATGTGTTTTTTTGTTGTCGTTAACTTATGAGTGGTGATTTAACACATTTTGAATTCATGTTCTCTCTGCAAACTTAGATTAGGTTTTCCTACTGGTTATTTAATTGTTTTTGAAGTATTGGCTCAGTGATCGATCAGTTCAGCATACTTTTAATTGCTTAAGGATTTTGGCTTACTCGACAAGCATAGTTCTTTGTTAATTTTACTTATGGTTGCCGGTTTGTTGTAACTGGTGCATTTCGTTCAGTGGATTAAGCTCGGGTGTTATCGTTTCTTTTCTGTGGCAGATATGCGATCTTCCTGTTAGCGTGTATAAGGGACACTCATTGCCGAAAGACACTGGGGAATATCTTTCTTCCGTCGGGCTTAAGAATGCTCTGTACACTATTAAAGCTGCAGATATGAGACCTGATCTTTTCAGTTCGCTCGTTCCTTGCACTTTTCATGTATGATGCTTCATTAGTTGAATGATTATCGAGTTAAAAGTTTAAGAGAACATTACTGTCATGAATTATATAAGAAAAAAGTAGGAAAAATATAGTAATTCTGCTCTTATACTAGACTTATTCAAGCATCACAAAGATTAATATTTCCCAAATGTTAGATCATCCATGTTTGGTCATTATTGAAGAGGGTGAATTTGGCCCTATCATGGGATGCTCTACAGATGTTTGCGAGAAAGGAGCATATTGTTTTAGTCTCCCTAGGTCACAATTTTGAGTTTGTACTCCATGCCTCCCTTGCCTTGTAACTTTCTATTTTGTAGAGAACACGGTTTCATGTTTTATAGGAAGAATAGTATAACTAGCACAGTTTGCACTTTAAAGTCAGACGATGAAGGCTGTAAACTACAACAACATGAAGCATTTTATCAGATTGGTTTTTTACAATAGCAAATTAGGATGTTAGGTTTTCAATTTTGTTTTTATGTAGATTCAATCTCCTTCCTGGACTATCTTTATGCACTCTAGCATAAGTTTGTTATATTTATAAAATGTTTCTGTTTTCCAGGATGAAGCTACTTCTCTTAAAGGTGAGGCTTCTGGCCAGGATGCCATAAAGAAGAGATCAAGAGAGACCATTGTATCAGAAAATATTGTAAGTTGATTTTCATGTCATCTTCTAAGCTAAAATTTTAATTGAAGCAATAAAGCTCTTTACAAAGGAACTTGCAACACTGAATTTGATATGCAACTTATGGTTTTTGTTGTCAATGCTTGTTTACTTGGGGTTAATGCAGATTTAAATGTTTGCAGGGGTCAACTGTTTTAACTCCTACTTCAAAAGATCCCTTGAGGAAACATGTCAAGTTGGAAGATTCCGTTGTGTCCCAAGCACCCTCTAACCATGTAAGTCAAAGTCTCGGTGATGTCATAGTGATTGGACCAATACTATGAACTGCATACTCTTGTCTGTAGCTAAATATTTGTGTACATGTGATTCTGTATTTTTTGCCTAGTGTTGCTTAAGTGGTTGATTAAAAAAAGAAATAATTACTGCATTTGTTTGTTGTCCTCTGAGCTGTATCAATTTTTATTTTAGTCTATTAATTAGGACGTAAAGTTCTGTTTCTAAACTAATTATGTATTTGATTGTGTCCTTGTGTTGTTAACATCTTTCAAAAGGTGCCAGCTCATTAAACCTTCAGAATTTTCACATCTGTCAACTGATATCAAGTCATCAATTTCGTTATGATCATAATAAGGTTGGTACAGGGTAGTTCTTATGCAAAGATATAATTAGGGTCTGAAATATTACTTTTAATTTAAAAGGGCCAAAATGAAACCAGCAAATGGTTGTGGTTTCCTGATGGTAATCATATTTTATAATGAACTAGCGAGGATGCAAACTAGTGGAGTCTCTTTTTAGTTTTGTTTTGACGCTGATATGCTTTCATTTCATTGTCCAGATTCCAAAATGATATTTCCATAATACAATGGAATAGTCCCTTAGTTTATTTTTCAACTTACTCGACAGATTTTGATAGCCATTATAATATTTCATGTACAGGAATCTTGCATTCTAGAATTCGATGGTGCCTCAAAGGGAAACCCTGGGCAAGCTGGTGCAGGAGCTGTTCTACGAGCTCATGATGGGAGTGTGGTATACATTCTTCCGTTTAGATCCCACATTACTTTTGTATTCTTATTTATATATACCTAATCTATCTTCCACCCCCCCCCCCCCCCCCCCTTTGGAATAGATATGTAGACTGCGTGAAGGCCTAGGTATAGCAACCAATAATGTTGCTGAATATCGAGCAATTCTTTTAGGGTTGAAGTATGCACTTGAGAAAGGGTTTACTAGGATCCATGTCCAAGGCGACTCCAAACTGGTCTGTATGCAGGTTGGTTAAAATATTTTTCCCTTACAAGTATTGTTGTGTTTTGTATTTATGTTTATGTTTATGTTTTTTTTAATTTATTTGTCAACTTAATTCTTGTTGTGGCCTCACATTGTAAGCTTGTTAAGTAGGTCTCATTTTGTCTTTTATATTTAGGAAAAATTCGGAGGCATGGTTTTAATGGTTGTCTTAGGACTAAGAAGTTCAAAGCTGAAAACTTTGTATTTAAAGATAATCCTTGTAAATTATTATTACACTGTAAGAAACATTTGTACTGAAGGGAAATAATTAGTCCAAACTGCATGAAACTAATGTTGTCATACCCGATTCTGGGAACATCCCAATAGTTTTCCTGGCCCATGGTTTGCAGTCTCTGTGAAAATACTATTTCATCGAGAGTTGTACTTCTATTTTCTTCAAAGGGAAGGAGGCTAACGTCCTTTTGTCGATATGCCTGCTCTGTGAAGATTCCCTTGACACTACTTTCACCCTAATCCAAGGGGGCAGGAACGTTAGAAGAAAACACACCAATTGACAAATTGAAAAAGAAGTTGTAGAACATTTGTTTAAGGCATTCTGATTCCTGAAACTTTTTCTTGCTATCGATTGCCCCTTTTATCAACACATGGGATGAAGTTTTAATGCAGTGGAACAATTTTCTGGTTAACAACATTGACGAAAAACCTTTCCTCTATTGAGATGTTAACAGACCTTACCTTCAAGTTGAAAAGTATATCATCATCAATGTAGCTCACTTCCATATGAGTTCTTTTGAATATCTAGCATTGGTTTTTGTGGCTCAGCATTGTGGAGGTTCATTAATAGAAAGTTGTAGGAAAGATCCAGAATTTGAACCAAACACAGTTCTTATATGGAGTTAGAAATTTACTAATTACTATGCATAGCAATTAAAGAATTAAAATGTATCTGGCCACGTCTTTTGGTTAGTTGCATTTTCAAGTTCGCATCCCCAGTTTCTCTCACTAGTAGTATGGTTTTGCTGAAATACAATGTTTATGTAAATATTTAATATTAGGGACATTTAAAGCTGCAACTGTTTTGTTATTGTCAACCTCCGTATATCAAAAGCAACCTTATCTCTTAGTCCTACCTCTCTGTCTGGATCCATCTGTTTTTTTGTAAAAAATAAAATTCATGGCATCTTCGTTTGTTCCCCTTCTTCTTATGTATTCTAAATCAAGCATACTTCATTGAACAGGTTCAAGGATTATGGAAGGTAAAAAATGAGAATATCGCTGAGTTATGTAATGAAGTTATGAAGCTGAAGGATAAATTTCTCTCCTTCGAGATCAGTCATGTACTAAGGGTCAGTACCATTAATTCCTTTCTATTTGCATCTCACGATGTTGTGTAGTTGGTTTCTGCATATTATTGTCTTTACTATTTAAGATCTGAAGGTGGTGAAAAAAAATATATCCTCAAGGGTCAGTACCCTACAAACATAGGCTTAAACTGTAGCCTTATTTTAGTTCAGTTTTTCGATAGAACAGTGAACGTAAGTCAAGTTTGAGTTTGCACGTTGCTTTCTCCACATTATTTGTCCGACAACCGAACGAGACTTGCATACTCGAAAAAAATAATAAATATGTACTCATAAAACAGTCTGGTACTTATTCCTTATCAAGGTAATGTCCTTAATGGAACTGGATACCAATTCTAGCGACCCTTGAATCCATTTTCTTATTTGTTGATATCTGTACTTGTTCATTCTTTTGAAATTCTGACATTCTGTCGTTCATTCTGGAAAGAATCTAAACTCTGAAGCCGATGCTCAAGCAAACTTGGCTGTCACTCTACCTGGTAATGCTTATTTGAAATAATTCTAATAACTACTTTGAGTTTTCCTTCAAGTTTAAGAGTAACCAAGGTGGTCCTTCCTATTGCAGACGGCGAAGCCCAAGAGTTTGAAGAATAATAGTTAGAATGCACGGCAGGATACATCTTACAGCATAGAATTATTTTCTGAGGAATGCATTTATAGTCCAATGCTTTGTATGCTACTATTCTTTTCCCAAGGTTGACACGATCTTTGGGCGTTGTTTCGGTTGCTCGCCTATGCTTCATGGCCCTGACTTAGCGAACTGAAGTTCTAGTGGCAATGGACTGGACAGTGCACAAGTGCATTTGTCCTGCATATATGAGATTAGAGTCCTAATTCAATTTATAACTGGAATGTTGCATTTATTTTCTTATTCATGTTACCAGTTGATTAGGCAATGATGCAGACTATAAATCGAGAATTAAAGAACACAGAAATTTTGGATTGTTCAATGAATATCTTTGAGAAAGACGTTTTTTTTTTCTGCTTCAGCCATCGAGGATTGTCAAACTTTGTAGCTTTTTCTCTTGTTTAAGTCTTGATTAGGTCTTCTATTCCTTCAGTTGGCTACTGGCGTTTATAGTCTTCTTCTTTTCTAATTTCAGGATTGGTTAGATCAAATAAGACTTGTGACAATCTCAAATTGATTGAGCTATCTAGCTTGTTTGTAGTTCTTAATTTCTTAGGTTATTGGTTGGTTCCTTCGTTAGATGTCTTATTCATAGATATCATTGTCATTATTATCATAGAGTTGTGCCTAATAGGCCCTAGAGGCGTCATCTTAGTGCTTGTATCCAACTCCATAGTTTTCATCCGTTATAGACACTACTAAG

mRNA sequence

CTCTGATGAACTGCTTCTCCCAATTCTCTACCTACACTCGCGCCATTTTCAGAACCACCAATCTTGCTTTTGCAGCTTCCACCTCCATTAATGGCTGCCGCGTTAATCTCTACTGGACCTCGAGCTTTCACAGCGTCACTCTTAAACCTACTCCTTTAGACTCCTTGTGTTCCAGATTTCGTCTACGTTGCTACTCCTCTCGAAAACTCCGCAAGGGCGCTTCTCCTTCTCCCAACTTAGATTCTAAACCTCCCATGGAACCAGACATGGGCGACTTCTTTGTCGTTCGGAAGGGGGACGTTGTTGGAGTCTATAAAAGTTTTACCGACTGTCAGGCGCAAATTGGATCTTCGATATGCGATCTTCCTGTTAGCGTGTATAAGGGACACTCATTGCCGAAAGACACTGGGGAATATCTTTCTTCCGTCGGGCTTAAGAATGCTCTGTACACTATTAAAGCTGCAGATATGAGACCTGATCTTTTCAGTTCGCTCGTTCCTTGCACTTTTCATGATGAAGCTACTTCTCTTAAAGGTGAGGCTTCTGGCCAGGATGCCATAAAGAAGAGATCAAGAGAGACCATTGTATCAGAAAATATTGGGTCAACTGTTTTAACTCCTACTTCAAAAGATCCCTTGAGGAAACATGTCAAGTTGGAAGATTCCGTTGTGTCCCAAGCACCCTCTAACCATGAATCTTGCATTCTAGAATTCGATGGTGCCTCAAAGGGAAACCCTGGGCAAGCTGGTGCAGGAGCTGTTCTACGAGCTCATGATGGGAGTGTGGTATACATTCTTCCGTTTAGATCCCACATTACTTTTATATGTAGACTGCGTGAAGGCCTAGGTATAGCAACCAATAATGTTGCTGAATATCGAGCAATTCTTTTAGGGTTGAAGTATGCACTTGAGAAAGGGTTTACTAGGATCCATGTCCAAGGCGACTCCAAACTGGTCTGTATGCAGGTTCAAGGATTATGGAAGGTAAAAAATGAGAATATCGCTGAGTTATGTAATGAAGTTATGAAGCTGAAGGATAAATTTCTCTCCTTCGAGATCAGTCATGTACTAAGGAATCTAAACTCTGAAGCCGATGCTCAAGCAAACTTGGCTGTCACTCTACCTGACGGCGAAGCCCAAGAGTTTGAAGAATAATAGTTAGAATGCACGGCAGGATACATCTTACAGCATAGAATTATTTTCTGAGGAATGCATTTATAGTCCAATGCTTTGTATGCTACTATTCTTTTCCCAAGGTTGACACGATCTTTGGGCGTTGTTTCGGTTGCTCGCCTATGCTTCATGGCCCTGACTTAGCGAACTGAAGTTCTAGTGGCAATGGACTGGACAGTGCACAAGTGCATTTGTCCTGCATATATGAGATTAGAGTCCTAATTCAATTTATAACTGGAATGTTGCATTTATTTTCTTATTCATGTTACCAGTTGATTAGGCAATGATGCAGACTATAAATCGAGAATTAAAGAACACAGAAATTTTGGATTGTTCAATGAATATCTTTGAGAAAGACGTTTTTTTTTTCTGCTTCAGCCATCGAGGATTGTCAAACTTTGTAGCTTTTTCTCTTGTTTAAGTCTTGATTAGGTCTTCTATTCCTTCAGTTGGCTACTGGCGTTTATAGTCTTCTTCTTTTCTAATTTCAGGATTGGTTAGATCAAATAAGACTTGTGACAATCTCAAATTGATTGAGCTATCTAGCTTGTTTGTAGTTCTTAATTTCTTAGGTTATTGGTTGGTTCCTTCGTTAGATGTCTTATTCATAGATATCATTGTCATTATTATCATAGAGTTGTGCCTAATAGGCCCTAGAGGCGTCATCTTAGTGCTTGTATCCAACTCCATAGTTTTCATCCGTTATAGACACTACTAAG

Coding sequence (CDS)

ATGAACTGCTTCTCCCAATTCTCTACCTACACTCGCGCCATTTTCAGAACCACCAATCTTGCTTTTGCAGCTTCCACCTCCATTAATGGCTGCCGCGTTAATCTCTACTGGACCTCGAGCTTTCACAGCGTCACTCTTAAACCTACTCCTTTAGACTCCTTGTGTTCCAGATTTCGTCTACGTTGCTACTCCTCTCGAAAACTCCGCAAGGGCGCTTCTCCTTCTCCCAACTTAGATTCTAAACCTCCCATGGAACCAGACATGGGCGACTTCTTTGTCGTTCGGAAGGGGGACGTTGTTGGAGTCTATAAAAGTTTTACCGACTGTCAGGCGCAAATTGGATCTTCGATATGCGATCTTCCTGTTAGCGTGTATAAGGGACACTCATTGCCGAAAGACACTGGGGAATATCTTTCTTCCGTCGGGCTTAAGAATGCTCTGTACACTATTAAAGCTGCAGATATGAGACCTGATCTTTTCAGTTCGCTCGTTCCTTGCACTTTTCATGATGAAGCTACTTCTCTTAAAGGTGAGGCTTCTGGCCAGGATGCCATAAAGAAGAGATCAAGAGAGACCATTGTATCAGAAAATATTGGGTCAACTGTTTTAACTCCTACTTCAAAAGATCCCTTGAGGAAACATGTCAAGTTGGAAGATTCCGTTGTGTCCCAAGCACCCTCTAACCATGAATCTTGCATTCTAGAATTCGATGGTGCCTCAAAGGGAAACCCTGGGCAAGCTGGTGCAGGAGCTGTTCTACGAGCTCATGATGGGAGTGTGGTATACATTCTTCCGTTTAGATCCCACATTACTTTTATATGTAGACTGCGTGAAGGCCTAGGTATAGCAACCAATAATGTTGCTGAATATCGAGCAATTCTTTTAGGGTTGAAGTATGCACTTGAGAAAGGGTTTACTAGGATCCATGTCCAAGGCGACTCCAAACTGGTCTGTATGCAGGTTCAAGGATTATGGAAGGTAAAAAATGAGAATATCGCTGAGTTATGTAATGAAGTTATGAAGCTGAAGGATAAATTTCTCTCCTTCGAGATCAGTCATGTACTAAGGAATCTAAACTCTGAAGCCGATGCTCAAGCAAACTTGGCTGTCACTCTACCTGACGGCGAAGCCCAAGAGTTTGAAGAATAA

Protein sequence

MNCFSQFSTYTRAIFRTTNLAFAASTSINGCRVNLYWTSSFHSVTLKPTPLDSLCSRFRLRCYSSRKLRKGASPSPNLDSKPPMEPDMGDFFVVRKGDVVGVYKSFTDCQAQIGSSICDLPVSVYKGHSLPKDTGEYLSSVGLKNALYTIKAADMRPDLFSSLVPCTFHDEATSLKGEASGQDAIKKRSRETIVSENIGSTVLTPTSKDPLRKHVKLEDSVVSQAPSNHESCILEFDGASKGNPGQAGAGAVLRAHDGSVVYILPFRSHITFICRLREGLGIATNNVAEYRAILLGLKYALEKGFTRIHVQGDSKLVCMQVQGLWKVKNENIAELCNEVMKLKDKFLSFEISHVLRNLNSEADAQANLAVTLPDGEAQEFEE
Homology
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BLAST of Carg26435 vs. NCBI nr
Match: XP_022946833.1 (uncharacterized protein LOC111450776 [Cucurbita moschata])

HSP 1 Score: 721.1 bits (1860), Expect = 2.0e-204
Identity = 365/382 (95.55%), Postives = 367/382 (96.07%), Query Frame = 0 

Query: 1   MNCFSQFSTYTRAIFRTTNLAFAASTSINGCRVNLYWTSSFHSVTLKPTPLDSLCSRFRL 60
           MNCFSQFSTYTRAIFRTTNLAFAASTSI+GCR NLYWTSSFHSVTLKPTPLDSLCSRF L
Sbjct: 1   MNCFSQFSTYTRAIFRTTNLAFAASTSIHGCRFNLYWTSSFHSVTLKPTPLDSLCSRFCL 60

Query: 61  RCYSSRKLRKGASPSPNLDSKPPMEPDMGDFFVVRKGDVVGVYKSFTDCQAQIGSSICDL 120
           RCYSSRKLRKGASPSPNLDSKPPMEPDMGDFFVVRKGDVVGVYKSFTDCQAQIGSSICDL
Sbjct: 61  RCYSSRKLRKGASPSPNLDSKPPMEPDMGDFFVVRKGDVVGVYKSFTDCQAQIGSSICDL 120

Query: 121 PVSVYKGHSLPKDTGEYLSSVGLKNALYTIKAADMRPDLFSSLVPCTFHDEATSLKGEAS 180
           PVSVYKGHSLPKDTGEYLSSVGLKNALYTIKAADMRPDLFSSLVPCTFHDEAT+LKGEAS
Sbjct: 121 PVSVYKGHSLPKDTGEYLSSVGLKNALYTIKAADMRPDLFSSLVPCTFHDEATTLKGEAS 180

Query: 181 GQDAIKKRSRETIVSENIGSTVLTPTSKDPLRKHVKLEDSVVSQAPSNHESCILEFDGAS 240
           GQDAIKKRSRETIVSENIGSTVLTPTSKDPLRKHVKLEDSVVSQAPSNHESC LEFDGAS
Sbjct: 181 GQDAIKKRSRETIVSENIGSTVLTPTSKDPLRKHVKLEDSVVSQAPSNHESCFLEFDGAS 240

Query: 241 KGNPGQAGAGAVLRAHDGSVVYILPFRSHITFICRLREGLGIATNNVAEYRAILLGLKYA 300
           KGNPGQAGAGAVLRAHDGSV            ICRLREGLGIATNNVAEYRAILLGLKYA
Sbjct: 241 KGNPGQAGAGAVLRAHDGSV------------ICRLREGLGIATNNVAEYRAILLGLKYA 300

Query: 301 LEKGFTRIHVQGDSKLVCMQVQGLWKVKNENIAELCNEVMKLKDKFLSFEISHVLRNLNS 360
           LEKGFTRIHVQGDSKLVCMQVQGLWKVKNENIAELCNEVMKLKDKFLSFEISHVLRNLNS
Sbjct: 301 LEKGFTRIHVQGDSKLVCMQVQGLWKVKNENIAELCNEVMKLKDKFLSFEISHVLRNLNS 360

Query: 361 EADAQANLAVTLPDGEAQEFEE 383
           EADAQANLAVTLPDGEAQEFEE
Sbjct: 361 EADAQANLAVTLPDGEAQEFEE 370

[Close]
BLAST of Carg26435 vs. NCBI nr
Match: XP_023547239.1 (uncharacterized protein LOC111806115 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 718.4 bits (1853), Expect = 1.3e-203
Identity = 363/382 (95.03%), Postives = 366/382 (95.81%), Query Frame = 0 

Query: 1   MNCFSQFSTYTRAIFRTTNLAFAASTSINGCRVNLYWTSSFHSVTLKPTPLDSLCSRFRL 60
           MNCFSQFSTYTRAIFR TNLAFAASTSI+GCR N YWTSSFHSVTLKPTPLDSLCSRFRL
Sbjct: 1   MNCFSQFSTYTRAIFRATNLAFAASTSIHGCRFNPYWTSSFHSVTLKPTPLDSLCSRFRL 60

Query: 61  RCYSSRKLRKGASPSPNLDSKPPMEPDMGDFFVVRKGDVVGVYKSFTDCQAQIGSSICDL 120
           RCYSSRKLRKGASPSPNLDSKPPMEPDMGDFFVVRKGDVVGVYKSFTDCQAQIGSSICDL
Sbjct: 61  RCYSSRKLRKGASPSPNLDSKPPMEPDMGDFFVVRKGDVVGVYKSFTDCQAQIGSSICDL 120

Query: 121 PVSVYKGHSLPKDTGEYLSSVGLKNALYTIKAADMRPDLFSSLVPCTFHDEATSLKGEAS 180
           PVSVYKGHSLPKDTGEYL+SVGLKNALYTIKAADMRPDLFSSLVPCTFHDEATSLKGEAS
Sbjct: 121 PVSVYKGHSLPKDTGEYLASVGLKNALYTIKAADMRPDLFSSLVPCTFHDEATSLKGEAS 180

Query: 181 GQDAIKKRSRETIVSENIGSTVLTPTSKDPLRKHVKLEDSVVSQAPSNHESCILEFDGAS 240
           GQDAIKKRSRETIVSENIGSTVLTPTSKDPLRKHVKLEDSVVSQAPSNHESC LEFDGAS
Sbjct: 181 GQDAIKKRSRETIVSENIGSTVLTPTSKDPLRKHVKLEDSVVSQAPSNHESCFLEFDGAS 240

Query: 241 KGNPGQAGAGAVLRAHDGSVVYILPFRSHITFICRLREGLGIATNNVAEYRAILLGLKYA 300
           KGNPGQAGAGAVLRAHDGSV            ICRLREGLGIATNNVAEYRAILLGLKYA
Sbjct: 241 KGNPGQAGAGAVLRAHDGSV------------ICRLREGLGIATNNVAEYRAILLGLKYA 300

Query: 301 LEKGFTRIHVQGDSKLVCMQVQGLWKVKNENIAELCNEVMKLKDKFLSFEISHVLRNLNS 360
           LEKGFTRIHVQGDSKLVCMQVQGLWKVKNENIAELCNEVMKLKDKFLSFEISHVLRNLNS
Sbjct: 301 LEKGFTRIHVQGDSKLVCMQVQGLWKVKNENIAELCNEVMKLKDKFLSFEISHVLRNLNS 360

Query: 361 EADAQANLAVTLPDGEAQEFEE 383
           EADA+ANLAVTLPDGEAQEFEE
Sbjct: 361 EADAEANLAVTLPDGEAQEFEE 370

[Close]
BLAST of Carg26435 vs. NCBI nr
Match: XP_022999715.1 (uncharacterized protein LOC111493983 [Cucurbita maxima])

HSP 1 Score: 698.0 bits (1800), Expect = 1.8e-197
Identity = 352/382 (92.15%), Postives = 362/382 (94.76%), Query Frame = 0 

Query: 1   MNCFSQFSTYTRAIFRTTNLAFAASTSINGCRVNLYWTSSFHSVTLKPTPLDSLCSRFRL 60
           MNC SQFSTY RAIFRTTNLAFAASTSI+GC  N YWTSS HSVTLKPTPLDSLCSRFRL
Sbjct: 1   MNCCSQFSTYARAIFRTTNLAFAASTSIHGCGFNPYWTSSLHSVTLKPTPLDSLCSRFRL 60

Query: 61  RCYSSRKLRKGASPSPNLDSKPPMEPDMGDFFVVRKGDVVGVYKSFTDCQAQIGSSICDL 120
           RCYSSRKLRKGASPSPNLDS+PPMEPDMGDFFVVRKGDVVGVY+SFTDCQAQIGSSICDL
Sbjct: 61  RCYSSRKLRKGASPSPNLDSEPPMEPDMGDFFVVRKGDVVGVYRSFTDCQAQIGSSICDL 120

Query: 121 PVSVYKGHSLPKDTGEYLSSVGLKNALYTIKAADMRPDLFSSLVPCTFHDEATSLKGEAS 180
           PVSVYKGHSLPKDT EYL+SVGLKNALYTI+AADMRPDLFSSLVPCTFHDEATSLKGEAS
Sbjct: 121 PVSVYKGHSLPKDTKEYLASVGLKNALYTIQAADMRPDLFSSLVPCTFHDEATSLKGEAS 180

Query: 181 GQDAIKKRSRETIVSENIGSTVLTPTSKDPLRKHVKLEDSVVSQAPSNHESCILEFDGAS 240
           GQDAIKKRSRETIVS+NIGSTVLTPTSKDPLRKHVKLEDSVVS+APSNHESC LEFDGAS
Sbjct: 181 GQDAIKKRSRETIVSKNIGSTVLTPTSKDPLRKHVKLEDSVVSRAPSNHESCFLEFDGAS 240

Query: 241 KGNPGQAGAGAVLRAHDGSVVYILPFRSHITFICRLREGLGIATNNVAEYRAILLGLKYA 300
           KGNPGQAGAGAVLRAHDGSV            ICRLREGLGIATNNVAEYRAILLGLKYA
Sbjct: 241 KGNPGQAGAGAVLRAHDGSV------------ICRLREGLGIATNNVAEYRAILLGLKYA 300

Query: 301 LEKGFTRIHVQGDSKLVCMQVQGLWKVKNENIAELCNEVMKLKDKFLSFEISHVLRNLNS 360
           LEKGFTRIHVQGDSKLVCMQVQGLWKVKNENI+ELCNEVMKLKDKFLSFEISHVLRNLNS
Sbjct: 301 LEKGFTRIHVQGDSKLVCMQVQGLWKVKNENISELCNEVMKLKDKFLSFEISHVLRNLNS 360

Query: 361 EADAQANLAVTLPDGEAQEFEE 383
           EADAQANLA++LPDGEAQEFEE
Sbjct: 361 EADAQANLAISLPDGEAQEFEE 370

[Close]
BLAST of Carg26435 vs. NCBI nr
Match: XP_004143798.1 (PREDICTED: uncharacterized protein LOC101210930 isoform X1 [Cucumis sativus] >KGN51206.1 hypothetical protein Csa_5G489310 [Cucumis sativus])

HSP 1 Score: 585.9 bits (1509), Expect = 1.0e-163
Identity = 302/386 (78.24%), Postives = 327/386 (84.72%), Query Frame = 0 

Query: 1   MNCFSQFSTYTRAIFRTTNLAFAASTSINGCRVNLYWTSSFHSVTLKPTPLDSLCSRFRL 60
           MNCFSQ STYTR IFR TNL FAASTSI+GC  N YWTSSFH+V +K T LDSLCSRF L
Sbjct: 1   MNCFSQVSTYTRVIFRRTNLVFAASTSIHGCS-NAYWTSSFHNVAVKTTALDSLCSRFGL 60

Query: 61  RCYSSRK---LRKGASPSPNLDSKPPMEPDMGDFFVVRKGDVVGVYKSFTDCQAQIGSSI 120
           RCYS+RK             LDS+PP+E +MGDFFVVRKGDVVGVYKSF+DCQAQIGSSI
Sbjct: 61  RCYSTRKXXXXXXXXXXXXKLDSEPPVESEMGDFFVVRKGDVVGVYKSFSDCQAQIGSSI 120

Query: 121 CDLPVSVYKGHSLPKDTGEYLSSVGLKNALYTIKAADMRPDLFSSLVPCTFHDEATSLKG 180
           CDLPVSV+KGHSLPKDT EYL+SVGLKNALYTIKAADMRPDLF SL PCTFH   TSL G
Sbjct: 121 CDLPVSVFKGHSLPKDTEEYLASVGLKNALYTIKAADMRPDLFGSLAPCTFHGGDTSLTG 180

Query: 181 EASGQDAIKKRSRETIVSENIGSTVLTPTSKDPLRKHVKLEDSVVSQA-PSNHESCILEF 240
           E SGQDAIKKRSRE IV EN+GSTVLTPT KDP RKH+KLEDS+VS +  SN ESC LEF
Sbjct: 181 ETSGQDAIKKRSREAIVPENVGSTVLTPTLKDPTRKHIKLEDSIVSHSVSSNRESCFLEF 240

Query: 241 DGASKGNPGQAGAGAVLRAHDGSVVYILPFRSHITFICRLREGLGIATNNVAEYRAILLG 300
           DGASKGNPGQAGAGAVLRAHDGSV            ICRLREGLGIATNNVAEYRAILLG
Sbjct: 241 DGASKGNPGQAGAGAVLRAHDGSV------------ICRLREGLGIATNNVAEYRAILLG 300

Query: 301 LKYALEKGFTRIHVQGDSKLVCMQVQGLWKVKNENIAELCNEVMKLKDKFLSFEISHVLR 360
           LK AL+KGFTRIHVQGDSKLVCMQVQGLWK K+EN++ELCNEV KLK+KFLSFE++HVLR
Sbjct: 301 LKSALKKGFTRIHVQGDSKLVCMQVQGLWKAKHENMSELCNEVTKLKNKFLSFEVNHVLR 360

Query: 361 NLNSEADAQANLAVTLPDGEAQEFEE 383
           +LNSEADAQANLA+TL +GE QEFE+
Sbjct: 361 HLNSEADAQANLALTLAEGEVQEFED 373

[Close]
BLAST of Carg26435 vs. NCBI nr
Match: XP_008465682.1 (PREDICTED: uncharacterized protein LOC103503315 isoform X1 [Cucumis melo])

HSP 1 Score: 575.1 bits (1481), Expect = 1.8e-160
Identity = 299/390 (76.67%), Postives = 327/390 (83.85%), Query Frame = 0 

Query: 1   MNCFSQFSTYTRAIFRTTNLAFAASTSINGCRVNLYWTSSFHSVTLKPTPLDSLCSRFRL 60
           MNC SQ STYTR IFR TNL FAASTSI+GC  N YW+S+FH+V +K T LDSLCSRF L
Sbjct: 1   MNCLSQVSTYTRVIFRRTNLVFAASTSIHGCS-NPYWSSTFHNVAVKATALDSLCSRFGL 60

Query: 61  RCYSSRK---LRKGASPSPNLDSKPPMEPDMGDFFVVRKGDVVGVYKSFTDCQAQIGSSI 120
           RCYS+RK             LDS+PPME +MGDFFVVRKGDVVGVYKSF+DC AQIGSSI
Sbjct: 61  RCYSTRKXXXXXXXXXXXXKLDSEPPMESEMGDFFVVRKGDVVGVYKSFSDCHAQIGSSI 120

Query: 121 CDLPVSVYKGHSLPKDTGEYLSSVGLKNALYTIKAADMRPDLFSSLVPCTFHDEATSLKG 180
           CDLPVSV+KGHSLPKD+ EYL+S+GLKNALYTIKAADMRPDLF SLVPCTFHD   SL G
Sbjct: 121 CDLPVSVFKGHSLPKDSEEYLASIGLKNALYTIKAADMRPDLFGSLVPCTFHDGDASLTG 180

Query: 181 EASGQDAIKKRSRETIVSENIGSTVLTPTS-----KDPLRKHVKLEDSVVSQAPSNHESC 240
           E SGQDAIKKRSRE IVSEN+GS+VLTPTS         RKH+KLEDS+VS + SNHESC
Sbjct: 181 ETSGQDAIKKRSREAIVSENVGSSVLTPTSXXXXXXXXXRKHIKLEDSIVSLS-SNHESC 240

Query: 241 ILEFDGASKGNPGQAGAGAVLRAHDGSVVYILPFRSHITFICRLREGLGIATNNVAEYRA 300
            LEFDGASKGNPGQAGAGAVLRAHDGSV            ICRLREGLGIATNNVAEYRA
Sbjct: 241 FLEFDGASKGNPGQAGAGAVLRAHDGSV------------ICRLREGLGIATNNVAEYRA 300

Query: 301 ILLGLKYALEKGFTRIHVQGDSKLVCMQVQGLWKVKNENIAELCNEVMKLKDKFLSFEIS 360
           ILLGLK+AL+KGFTRIHVQGDSKLVCMQVQGLWK KNENI+ELCNEV+KLK+KFLSFE++
Sbjct: 301 ILLGLKFALKKGFTRIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVN 360

Query: 361 HVLRNLNSEADAQANLAVTLPDGEAQEFEE 383
           HVLR+LNSEADAQANLA+TL DGE QE E+
Sbjct: 361 HVLRHLNSEADAQANLALTLADGEIQESED 376

[Close]
BLAST of Carg26435 vs. TAIR10
Match: AT1G24090.1 (RNase H family protein)

HSP 1 Score: 310.8 bits (795), Expect = 1.1e-84
Identity = 180/379 (47.49%), Postives = 241/379 (63.59%), Query Frame = 0 

Query: 1   MNCFSQFSTYTRAIFRTTNLAFAASTSINGCRVNLYWTSSFHSVTLKPTPLDSLCSRFRL 60
           MNC S   +Y  A+      ++ +S   N C    ++  S     LKP  + S+     +
Sbjct: 1   MNCLSHARSYI-ALGLLKRSSYVSSIPWNEC---FFYMPS--KSCLKPVAVSSVFGICSV 60

Query: 61  RCYSSR-KLRKGASPSPNLDSKPPMEPDMGDFFVVRKGDVVGVYKSFTDCQAQIGSSICD 120
             YSSR K  K    S  + S    E D   FFVVRKGDV+G+YK  +DCQAQ+GSS+ D
Sbjct: 61  HSYSSRSKAVKSKMLSSTVVSAVDKEKDA--FFVVRKGDVIGIYKDLSDCQAQVGSSVFD 120

Query: 121 LPVSVYKGHSLPKDTGEYLSSVGLKNALYTIKAADMRPDLFSSLVPCTFHDEATSLKGEA 180
           LPVSVYKG+SLPKDT EYLSSVGLK  LY+++A+D++ D+F +L PC F + A      +
Sbjct: 121 LPVSVYKGYSLPKDTEEYLSSVGLKKPLYSLRASDLKDDMFGALTPCLFQEPAPCTVKVS 180

Query: 181 SGQDAIKKRSRETIVSENIGSTVLTPTSKDPLRKHVKLEDSVVSQAPSNHESCILEFDGA 240
             +   + +S++    +   +++    S DPL K  K+E S    A  + E+C +EFDGA
Sbjct: 181 EDETTSETKSKDDKKDQLPSASI----SYDPLEKLSKVEPS----AYISDETCFIEFDGA 240

Query: 241 SKGNPGQAGAGAVLRAHDGSVVYILPFRSHITFICRLREGLGIATNNVAEYRAILLGLKY 300
           SKGNPG +GA AVL+  DGS+            ICR+R+GLGIATNN AEY A++LGLKY
Sbjct: 241 SKGNPGLSGAAAVLKTEDGSL------------ICRVRQGLGIATNNAAEYHALILGLKY 300

Query: 301 ALEKGFTRIHVQGDSKLVCMQVQGLWKVKNENIAELCNEVMKLKDKFLSFEISHVLRNLN 360
           A+EKG+  I V+GDSKLVCMQ++G WKV +E +A+L  E   L +K +SFEISHVLRNLN
Sbjct: 301 AIEKGYKNIKVKGDSKLVCMQIKGQWKVNHEVLAKLHKEAKLLCNKCVSFEISHVLRNLN 351

Query: 361 SEADAQANLAVTLPDGEAQ 379
           ++AD QANLAV LP+GE +
Sbjct: 361 ADADEQANLAVRLPEGEVE 351

[Close]
BLAST of Carg26435 vs. TAIR10
Match: AT5G51080.1 (RNase H family protein)

HSP 1 Score: 273.9 bits (699), Expect = 1.5e-73
Identity = 142/288 (49.31%), Postives = 190/288 (65.97%), Query Frame = 0 

Query: 91  FFVVRKGDVVGVYKSFTDCQAQIGSSICDLPVSVYKGHSLPKDTGEYLSSVGLKNALYTI 150
           FFVVRKGD+VG+YK   DCQAQ+GSS+ D PVSVYKG+SL KDT E LS+VGLK  LY  
Sbjct: 81  FFVVRKGDIVGIYKDLIDCQAQVGSSVYDPPVSVYKGYSLLKDTEECLSTVGLKKPLYVF 140

Query: 151 KAADMRPDLFSSLVPCTFHDEATSLKGEASGQDAIKKRSRETIVSENIGSTVLTPTSKDP 210
           +A D++ D+F +L PC F D+                                 P++   
Sbjct: 141 RALDLKEDMFGALTPCLFQDQ--------------------------------LPSASMS 200

Query: 211 LRKHVKLEDSVVSQAPSNHESCILEFDGASKGNPGQAGAGAVLRAHDGSVVYILPFRSHI 270
           + K  +LE S    A +++E+CI+EFDGASKGNPG +GA AVL+  DGS+++        
Sbjct: 201 VEKLAELEPS----ADTSYETCIIEFDGASKGNPGLSGAAAVLKTEDGSLIF-------- 260

Query: 271 TFICRLREGLGIATNNVAEYRAILLGLKYALEKGFTRIHVQGDSKLVCMQVQGLWKVKNE 330
               ++R+GLGIATNN AEY  ++LGLK+A+EKG+T+I V+ DSKLVCMQ++G WKV +E
Sbjct: 261 ----KMRQGLGIATNNAAEYHGLILGLKHAIEKGYTKIKVKTDSKLVCMQMKGQWKVNHE 320

Query: 331 NIAELCNEVMKLKDKFLSFEISHVLRNLNSEADAQANLAVTLPDGEAQ 379
            +++L  E  +L DK LSFEISHVLR+LNS+AD QAN+A  L +GE +
Sbjct: 321 VLSKLHKEAKQLSDKCLSFEISHVLRSLNSDADEQANMAARLSEGEVE 320

[Close]
BLAST of Carg26435 vs. TAIR10
Match: AT3G01410.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 270.0 bits (689), Expect = 2.2e-72
Identity = 140/304 (46.05%), Postives = 198/304 (65.13%), Query Frame = 0 

Query: 84  MEPDMGDFFVVRKGDVVGVYKSFTDCQAQIGSSICDLPVSVYKGHSLPKDTGEYLSSVGL 143
           ME +   F++VRKGD++GVY+S ++CQ Q GSS+    +SVYKG+  PK   + LSS G+
Sbjct: 5   MEDEKDAFYIVRKGDIIGVYRSLSECQGQAGSSVSHPAMSVYKGYGWPKGAEDLLSSFGI 64

Query: 144 KNALYTIKAADMRPDLFSSLVPCTFHDEATSLKGEASGQDAIKKRSRETIVSENIGSTVL 203
           KNAL+++ A+ ++ D F  L+PC     ++S +GE+  + +  KR       +++GS   
Sbjct: 65  KNALFSVNASHVKDDAFGKLIPCPVQQPSSS-QGESLNKSSPSKR------LQDMGSGES 124

Query: 204 TPTSKDPLRKHVKLEDSVVSQAPSN---------HESCILEFDGASKGNPGQAGAGAVLR 263
              S  P +K +K+E+ ++ + PS+         ++SC +EFDGASKGNPG+AGAGAVLR
Sbjct: 125 GSFSPSPPQKQLKIENDMLRRIPSSLLTRTPIRQNDSCTIEFDGASKGNPGKAGAGAVLR 184

Query: 264 AHDGSVVYILPFRSHITFICRLREGLGIATNNVAEYRAILLGLKYALEKGFTRIHVQGDS 323
           A D SV++             LREG+G ATNNVAEYRA+LLGL+ AL+KGF  +HV GDS
Sbjct: 185 ASDNSVLFY------------LREGVGNATNNVAEYRALLLGLRSALDKGFKNVHVLGDS 244

Query: 324 KLVCMQVQGLWKVKNENIAELCNEVMKLKDKFLSFEISHVLRNLNSEADAQANLAVTLPD 379
            LVCMQVQG WK  +  +AELC +  +L + F +F+I H+ R  NSEAD QAN A+ L D
Sbjct: 245 MLVCMQVQGAWKTNHPKMAELCKQAKELMNSFKTFDIKHIAREKNSEADKQANSAIFLAD 289

[Close]
BLAST of Carg26435 vs. Swiss-Prot
Match: sp|P9WLH5|RNHPH_MYCTU (Bifunctional protein Rv2228c OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=Rv2228c PE=1 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 4.3e-17
Identity = 54/138 (39.13%), Postives = 75/138 (54.35%), Query Frame = 0 

Query: 233 ILEFDGASKGNPGQAGAGAVLRAHDGSVVYILPFRSHITFICRLREGLGIATNNVAEYRA 292
           ++E DG S+GNPG AG GAV+   D           H T +   ++ +G ATNNVAEYR 
Sbjct: 4   VIEADGGSRGNPGPAGYGAVVWTAD-----------HSTVLAESKQAIGRATNNVAEYRG 63

Query: 293 ILLGLKYALEKGFTRIHVQGDSKLVCMQVQGLWKVKNENIAELCNEVMKLKDKFLSFEIS 352
           ++ GL  A++ G T   V  DSKLV  Q+ G WKVK+ ++ +L  +   L  +F      
Sbjct: 64  LIAGLDDAVKLGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYE 123

Query: 353 HVLRNLNSEADAQANLAV 371
            V R  N+ AD  AN A+
Sbjct: 124 WVPRARNTYADRLANDAM 130

[Close]
BLAST of Carg26435 vs. Swiss-Prot
Match: sp|P9WLH4|Y2228_MYCTO (Uncharacterized protein MT2287 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=MT2287 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 4.3e-17
Identity = 54/138 (39.13%), Postives = 75/138 (54.35%), Query Frame = 0 

Query: 233 ILEFDGASKGNPGQAGAGAVLRAHDGSVVYILPFRSHITFICRLREGLGIATNNVAEYRA 292
           ++E DG S+GNPG AG GAV+   D           H T +   ++ +G ATNNVAEYR 
Sbjct: 4   VIEADGGSRGNPGPAGYGAVVWTAD-----------HSTVLAESKQAIGRATNNVAEYRG 63

Query: 293 ILLGLKYALEKGFTRIHVQGDSKLVCMQVQGLWKVKNENIAELCNEVMKLKDKFLSFEIS 352
           ++ GL  A++ G T   V  DSKLV  Q+ G WKVK+ ++ +L  +   L  +F      
Sbjct: 64  LIAGLDDAVKLGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYE 123

Query: 353 HVLRNLNSEADAQANLAV 371
            V R  N+ AD  AN A+
Sbjct: 124 WVPRARNTYADRLANDAM 130

[Close]
BLAST of Carg26435 vs. Swiss-Prot
Match: sp|P64956|Y2253_MYCBO (Uncharacterized protein Mb2253c OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) OX=233413 GN=BQ2027_MB2253C PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 4.3e-17
Identity = 54/138 (39.13%), Postives = 75/138 (54.35%), Query Frame = 0 

Query: 233 ILEFDGASKGNPGQAGAGAVLRAHDGSVVYILPFRSHITFICRLREGLGIATNNVAEYRA 292
           ++E DG S+GNPG AG GAV+   D           H T +   ++ +G ATNNVAEYR 
Sbjct: 4   VIEADGGSRGNPGPAGYGAVVWTAD-----------HSTVLAESKQAIGRATNNVAEYRG 63

Query: 293 ILLGLKYALEKGFTRIHVQGDSKLVCMQVQGLWKVKNENIAELCNEVMKLKDKFLSFEIS 352
           ++ GL  A++ G T   V  DSKLV  Q+ G WKVK+ ++ +L  +   L  +F      
Sbjct: 64  LIAGLDDAVKLGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYE 123

Query: 353 HVLRNLNSEADAQANLAV 371
            V R  N+ AD  AN A+
Sbjct: 124 WVPRARNTYADRLANDAM 130

[Close]
BLAST of Carg26435 vs. Swiss-Prot
Match: sp|Q9HSF6|RNH_HALSA (Ribonuclease HI OS=Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) OX=64091 GN=rnhA PE=1 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 1.5e-14
Identity = 51/135 (37.78%), Postives = 71/135 (52.59%), Query Frame = 0 

Query: 236 FDGASKGNPGQAGAGAVLRAHDGSVVYILPFRSHITFICRLREGLGIATNNVAEYRAILL 295
           FDGAS+GNPG A  G VL + DG +V                + +G ATNN AEY A++ 
Sbjct: 74  FDGASRGNPGPAAVGWVLVSGDGGIV------------AEGGDTIGRATNNQAEYDALIA 133

Query: 296 GLKYALEKGFTRIHVQGDSKLVCMQVQGLWKVKNENIAELCNEVMKLKDKFLSFEISHVL 355
            L+ A + GF  I ++GDS+LV  Q+ G W   + ++        +L   F  + I+HV 
Sbjct: 134 ALEAAADFGFDDIELRGDSQLVEKQLTGAWDTNDPDLRRKRVRARELLTGFDDWSITHVP 193

Query: 356 RNLNSEADAQANLAV 371
           R  N  ADA AN A+
Sbjct: 194 RATNERADALANEAL 196

[Close]
BLAST of Carg26435 vs. Swiss-Prot
Match: sp|P54162|RNHL_BACSU (14.7 kDa ribonuclease H-like protein OS=Bacillus subtilis (strain 168) OX=224308 GN=rnhA PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 3.1e-07
Identity = 39/136 (28.68%), Postives = 63/136 (46.32%), Query Frame = 0 

Query: 237 DGASKGNPGQAGAGAVLRAHDGSVVYILPFRSHITFICRLREGLGIATNNVAEYRAILLG 296
           DGAS GNPG +G G  ++    +  + +P              +G+ TN  AE+ A++ G
Sbjct: 8   DGASAGNPGPSGIGIFIKHEGKAESFSIP--------------IGVHTNQEAEFLALIEG 67

Query: 297 LKYALEKGFTRIHVQGDSKLVCMQVQGLWKVKNENIAELCNEVMKLKDKFLSFEISHVLR 356
           +K    +G+  +  + DS +V  +   L  VKN        E+++LK  F  F I  +  
Sbjct: 68  MKLCATRGYQSVSFRTDSDIV-ERATELEMVKNITFQPFVEEIIRLKAAFPLFFIKWIPG 127

Query: 357 NLNSEADAQANLAVTL 373
             N +AD  A  A+ L
Sbjct: 128 KQNQKADLLAKEAIRL 128

[Close]
BLAST of Carg26435 vs. TrEMBL
Match: tr|A0A0A0KTZ9|A0A0A0KTZ9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G489310 PE=4 SV=1)

HSP 1 Score: 585.9 bits (1509), Expect = 6.7e-164
Identity = 302/386 (78.24%), Postives = 327/386 (84.72%), Query Frame = 0 

Query: 1   MNCFSQFSTYTRAIFRTTNLAFAASTSINGCRVNLYWTSSFHSVTLKPTPLDSLCSRFRL 60
           MNCFSQ STYTR IFR TNL FAASTSI+GC  N YWTSSFH+V +K T LDSLCSRF L
Sbjct: 1   MNCFSQVSTYTRVIFRRTNLVFAASTSIHGCS-NAYWTSSFHNVAVKTTALDSLCSRFGL 60

Query: 61  RCYSSRK---LRKGASPSPNLDSKPPMEPDMGDFFVVRKGDVVGVYKSFTDCQAQIGSSI 120
           RCYS+RK             LDS+PP+E +MGDFFVVRKGDVVGVYKSF+DCQAQIGSSI
Sbjct: 61  RCYSTRKXXXXXXXXXXXXKLDSEPPVESEMGDFFVVRKGDVVGVYKSFSDCQAQIGSSI 120

Query: 121 CDLPVSVYKGHSLPKDTGEYLSSVGLKNALYTIKAADMRPDLFSSLVPCTFHDEATSLKG 180
           CDLPVSV+KGHSLPKDT EYL+SVGLKNALYTIKAADMRPDLF SL PCTFH   TSL G
Sbjct: 121 CDLPVSVFKGHSLPKDTEEYLASVGLKNALYTIKAADMRPDLFGSLAPCTFHGGDTSLTG 180

Query: 181 EASGQDAIKKRSRETIVSENIGSTVLTPTSKDPLRKHVKLEDSVVSQA-PSNHESCILEF 240
           E SGQDAIKKRSRE IV EN+GSTVLTPT KDP RKH+KLEDS+VS +  SN ESC LEF
Sbjct: 181 ETSGQDAIKKRSREAIVPENVGSTVLTPTLKDPTRKHIKLEDSIVSHSVSSNRESCFLEF 240

Query: 241 DGASKGNPGQAGAGAVLRAHDGSVVYILPFRSHITFICRLREGLGIATNNVAEYRAILLG 300
           DGASKGNPGQAGAGAVLRAHDGSV            ICRLREGLGIATNNVAEYRAILLG
Sbjct: 241 DGASKGNPGQAGAGAVLRAHDGSV------------ICRLREGLGIATNNVAEYRAILLG 300

Query: 301 LKYALEKGFTRIHVQGDSKLVCMQVQGLWKVKNENIAELCNEVMKLKDKFLSFEISHVLR 360
           LK AL+KGFTRIHVQGDSKLVCMQVQGLWK K+EN++ELCNEV KLK+KFLSFE++HVLR
Sbjct: 301 LKSALKKGFTRIHVQGDSKLVCMQVQGLWKAKHENMSELCNEVTKLKNKFLSFEVNHVLR 360

Query: 361 NLNSEADAQANLAVTLPDGEAQEFEE 383
           +LNSEADAQANLA+TL +GE QEFE+
Sbjct: 361 HLNSEADAQANLALTLAEGEVQEFED 373

[Close]
BLAST of Carg26435 vs. TrEMBL
Match: tr|A0A1S3CPT7|A0A1S3CPT7_CUCME (uncharacterized protein LOC103503315 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503315 PE=4 SV=1)

HSP 1 Score: 575.1 bits (1481), Expect = 1.2e-160
Identity = 299/390 (76.67%), Postives = 327/390 (83.85%), Query Frame = 0 

Query: 1   MNCFSQFSTYTRAIFRTTNLAFAASTSINGCRVNLYWTSSFHSVTLKPTPLDSLCSRFRL 60
           MNC SQ STYTR IFR TNL FAASTSI+GC  N YW+S+FH+V +K T LDSLCSRF L
Sbjct: 1   MNCLSQVSTYTRVIFRRTNLVFAASTSIHGCS-NPYWSSTFHNVAVKATALDSLCSRFGL 60

Query: 61  RCYSSRK---LRKGASPSPNLDSKPPMEPDMGDFFVVRKGDVVGVYKSFTDCQAQIGSSI 120
           RCYS+RK             LDS+PPME +MGDFFVVRKGDVVGVYKSF+DC AQIGSSI
Sbjct: 61  RCYSTRKXXXXXXXXXXXXKLDSEPPMESEMGDFFVVRKGDVVGVYKSFSDCHAQIGSSI 120

Query: 121 CDLPVSVYKGHSLPKDTGEYLSSVGLKNALYTIKAADMRPDLFSSLVPCTFHDEATSLKG 180
           CDLPVSV+KGHSLPKD+ EYL+S+GLKNALYTIKAADMRPDLF SLVPCTFHD   SL G
Sbjct: 121 CDLPVSVFKGHSLPKDSEEYLASIGLKNALYTIKAADMRPDLFGSLVPCTFHDGDASLTG 180

Query: 181 EASGQDAIKKRSRETIVSENIGSTVLTPTS-----KDPLRKHVKLEDSVVSQAPSNHESC 240
           E SGQDAIKKRSRE IVSEN+GS+VLTPTS         RKH+KLEDS+VS + SNHESC
Sbjct: 181 ETSGQDAIKKRSREAIVSENVGSSVLTPTSXXXXXXXXXRKHIKLEDSIVSLS-SNHESC 240

Query: 241 ILEFDGASKGNPGQAGAGAVLRAHDGSVVYILPFRSHITFICRLREGLGIATNNVAEYRA 300
            LEFDGASKGNPGQAGAGAVLRAHDGSV            ICRLREGLGIATNNVAEYRA
Sbjct: 241 FLEFDGASKGNPGQAGAGAVLRAHDGSV------------ICRLREGLGIATNNVAEYRA 300

Query: 301 ILLGLKYALEKGFTRIHVQGDSKLVCMQVQGLWKVKNENIAELCNEVMKLKDKFLSFEIS 360
           ILLGLK+AL+KGFTRIHVQGDSKLVCMQVQGLWK KNENI+ELCNEV+KLK+KFLSFE++
Sbjct: 301 ILLGLKFALKKGFTRIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVN 360

Query: 361 HVLRNLNSEADAQANLAVTLPDGEAQEFEE 383
           HVLR+LNSEADAQANLA+TL DGE QE E+
Sbjct: 361 HVLRHLNSEADAQANLALTLADGEIQESED 376

[Close]
BLAST of Carg26435 vs. TrEMBL
Match: tr|A0A1S3CQX0|A0A1S3CQX0_CUCME (uncharacterized protein LOC103503315 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103503315 PE=4 SV=1)

HSP 1 Score: 539.3 bits (1388), Expect = 7.2e-150
Identity = 279/364 (76.65%), Postives = 304/364 (83.52%), Query Frame = 0 

Query: 1   MNCFSQFSTYTRAIFRTTNLAFAASTSINGCRVNLYWTSSFHSVTLKPTPLDSLCSRFRL 60
           MNC SQ STYTR IFR TNL FAASTSI+GC  N YW+S+FH+V +K T LDSLCSRF L
Sbjct: 1   MNCLSQVSTYTRVIFRRTNLVFAASTSIHGCS-NPYWSSTFHNVAVKATALDSLCSRFGL 60

Query: 61  RCYSSRK---LRKGASPSPNLDSKPPMEPDMGDFFVVRKGDVVGVYKSFTDCQAQIGSSI 120
           RCYS+RK             LDS+PPME +MGDFFVVRKGDVVGVYKSF+DC AQIGSSI
Sbjct: 61  RCYSTRKXXXXXXXXXXXXKLDSEPPMESEMGDFFVVRKGDVVGVYKSFSDCHAQIGSSI 120

Query: 121 CDLPVSVYKGHSLPKDTGEYLSSVGLKNALYTIKAADMRPDLFSSLVPCTFHDEATSLKG 180
           CDLPVSV+KGHSLPKD+ EYL+S+GLKNALYTIKAADMRPDLF SLVPCTFHD   SL G
Sbjct: 121 CDLPVSVFKGHSLPKDSEEYLASIGLKNALYTIKAADMRPDLFGSLVPCTFHDGDASLTG 180

Query: 181 EASGQDAIKKRSRETIVSENIGSTVLTPTS-----KDPLRKHVKLEDSVVSQAPSNHESC 240
           E SGQDAIKKRSRE IVSEN+GS+VLTPTS         RKH+KLEDS+VS + SNHESC
Sbjct: 181 ETSGQDAIKKRSREAIVSENVGSSVLTPTSXXXXXXXXXRKHIKLEDSIVSLS-SNHESC 240

Query: 241 ILEFDGASKGNPGQAGAGAVLRAHDGSVVYILPFRSHITFICRLREGLGIATNNVAEYRA 300
            LEFDGASKGNPGQAGAGAVLRAHDGSV            ICRLREGLGIATNNVAEYRA
Sbjct: 241 FLEFDGASKGNPGQAGAGAVLRAHDGSV------------ICRLREGLGIATNNVAEYRA 300

Query: 301 ILLGLKYALEKGFTRIHVQGDSKLVCMQVQGLWKVKNENIAELCNEVMKLKDKFLSFEIS 357
           ILLGLK+AL+KGFTRIHVQGDSKLVCMQVQGLWK KNENI+ELCNEV+KLK+KFLSFE++
Sbjct: 301 ILLGLKFALKKGFTRIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVN 350

[Close]
BLAST of Carg26435 vs. TrEMBL
Match: tr|A0A1S3CPG2|A0A1S3CPG2_CUCME (uncharacterized protein LOC103503315 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103503315 PE=4 SV=1)

HSP 1 Score: 539.3 bits (1388), Expect = 7.2e-150
Identity = 279/364 (76.65%), Postives = 304/364 (83.52%), Query Frame = 0 

Query: 1   MNCFSQFSTYTRAIFRTTNLAFAASTSINGCRVNLYWTSSFHSVTLKPTPLDSLCSRFRL 60
           MNC SQ STYTR IFR TNL FAASTSI+GC  N YW+S+FH+V +K T LDSLCSRF L
Sbjct: 1   MNCLSQVSTYTRVIFRRTNLVFAASTSIHGCS-NPYWSSTFHNVAVKATALDSLCSRFGL 60

Query: 61  RCYSSRK---LRKGASPSPNLDSKPPMEPDMGDFFVVRKGDVVGVYKSFTDCQAQIGSSI 120
           RCYS+RK             LDS+PPME +MGDFFVVRKGDVVGVYKSF+DC AQIGSSI
Sbjct: 61  RCYSTRKXXXXXXXXXXXXKLDSEPPMESEMGDFFVVRKGDVVGVYKSFSDCHAQIGSSI 120

Query: 121 CDLPVSVYKGHSLPKDTGEYLSSVGLKNALYTIKAADMRPDLFSSLVPCTFHDEATSLKG 180
           CDLPVSV+KGHSLPKD+ EYL+S+GLKNALYTIKAADMRPDLF SLVPCTFHD   SL G
Sbjct: 121 CDLPVSVFKGHSLPKDSEEYLASIGLKNALYTIKAADMRPDLFGSLVPCTFHDGDASLTG 180

Query: 181 EASGQDAIKKRSRETIVSENIGSTVLTPTS-----KDPLRKHVKLEDSVVSQAPSNHESC 240
           E SGQDAIKKRSRE IVSEN+GS+VLTPTS         RKH+KLEDS+VS + SNHESC
Sbjct: 181 ETSGQDAIKKRSREAIVSENVGSSVLTPTSXXXXXXXXXRKHIKLEDSIVSLS-SNHESC 240

Query: 241 ILEFDGASKGNPGQAGAGAVLRAHDGSVVYILPFRSHITFICRLREGLGIATNNVAEYRA 300
            LEFDGASKGNPGQAGAGAVLRAHDGSV            ICRLREGLGIATNNVAEYRA
Sbjct: 241 FLEFDGASKGNPGQAGAGAVLRAHDGSV------------ICRLREGLGIATNNVAEYRA 300

Query: 301 ILLGLKYALEKGFTRIHVQGDSKLVCMQVQGLWKVKNENIAELCNEVMKLKDKFLSFEIS 357
           ILLGLK+AL+KGFTRIHVQGDSKLVCMQVQGLWK KNENI+ELCNEV+KLK+KFLSFE++
Sbjct: 301 ILLGLKFALKKGFTRIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVN 350

[Close]
BLAST of Carg26435 vs. TrEMBL
Match: tr|A0A1S3CPE1|A0A1S3CPE1_CUCME (uncharacterized protein LOC103503315 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103503315 PE=4 SV=1)

HSP 1 Score: 476.1 bits (1224), Expect = 7.4e-131
Identity = 249/329 (75.68%), Postives = 270/329 (82.07%), Query Frame = 0 

Query: 1   MNCFSQFSTYTRAIFRTTNLAFAASTSINGCRVNLYWTSSFHSVTLKPTPLDSLCSRFRL 60
           MNC SQ STYTR IFR TNL FAASTSI+GC  N YW+S+FH+V +K T LDSLCSRF L
Sbjct: 1   MNCLSQVSTYTRVIFRRTNLVFAASTSIHGCS-NPYWSSTFHNVAVKATALDSLCSRFGL 60

Query: 61  RCYSSRK---LRKGASPSPNLDSKPPMEPDMGDFFVVRKGDVVGVYKSFTDCQAQIGSSI 120
           RCYS+RK             LDS+PPME +MGDFFVVRKGDVVGVYKSF+DC AQIGSSI
Sbjct: 61  RCYSTRKXXXXXXXXXXXXKLDSEPPMESEMGDFFVVRKGDVVGVYKSFSDCHAQIGSSI 120

Query: 121 CDLPVSVYKGHSLPKDTGEYLSSVGLKNALYTIKAADMRPDLFSSLVPCTFHDEATSLKG 180
           CDLPVSV+KGHSLPKD+ EYL+S+GLKNALYTIKAADMRPDLF SLVPCTFHD   SL G
Sbjct: 121 CDLPVSVFKGHSLPKDSEEYLASIGLKNALYTIKAADMRPDLFGSLVPCTFHDGDASLTG 180

Query: 181 EASGQDAIKKRSRETIVSENIGSTVLTPTS-----KDPLRKHVKLEDSVVSQAPSNHESC 240
           E SGQDAIKKRSRE IVSEN+GS+VLTPTS         RKH+KLEDS+VS + SNHESC
Sbjct: 181 ETSGQDAIKKRSREAIVSENVGSSVLTPTSXXXXXXXXXRKHIKLEDSIVSLS-SNHESC 240

Query: 241 ILEFDGASKGNPGQAGAGAVLRAHDGSVVYILPFRSHITFICRLREGLGIATNNVAEYRA 300
            LEFDGASKGNPGQAGAGAVLRAHDGSV            ICRLREGLGIATNNVAEYRA
Sbjct: 241 FLEFDGASKGNPGQAGAGAVLRAHDGSV------------ICRLREGLGIATNNVAEYRA 300

Query: 301 ILLGLKYALEKGFTRIHVQGDSKLVCMQV 322
           ILLGLK+AL+KGFTRIHVQGDSKLVCMQ+
Sbjct: 301 ILLGLKFALKKGFTRIHVQGDSKLVCMQL 315

The following BLAST results are available for this feature:
BLAST of Carg26435 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022946833.12.0e-20495.55uncharacterized protein LOC111450776 [Cucurbita moschata][more]
XP_023547239.11.3e-20395.03uncharacterized protein LOC111806115 [Cucurbita pepo subsp. pepo][more]
XP_022999715.11.8e-19792.15uncharacterized protein LOC111493983 [Cucurbita maxima][more]
XP_004143798.11.0e-16378.24PREDICTED: uncharacterized protein LOC101210930 isoform X1 [Cucumis sativus] >KG... [more]
XP_008465682.11.8e-16076.67PREDICTED: uncharacterized protein LOC103503315 isoform X1 [Cucumis melo][more]
BLAST of Carg26435 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G24090.11.1e-8447.49RNase H family protein[more]
AT5G51080.11.5e-7349.31RNase H family protein[more]
AT3G01410.12.2e-7246.05Polynucleotidyl transferase, ribonuclease H-like superfamily protein[more]
BLAST of Carg26435 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P9WLH5|RNHPH_MYCTU4.3e-1739.13Bifunctional protein Rv2228c OS=Mycobacterium tuberculosis (strain ATCC 25618 / ... [more]
sp|P9WLH4|Y2228_MYCTO4.3e-1739.13Uncharacterized protein MT2287 OS=Mycobacterium tuberculosis (strain CDC 1551 / ... [more]
sp|P64956|Y2253_MYCBO4.3e-1739.13Uncharacterized protein Mb2253c OS=Mycobacterium bovis (strain ATCC BAA-935 / AF... [more]
sp|Q9HSF6|RNH_HALSA1.5e-1437.78Ribonuclease HI OS=Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC... [more]
sp|P54162|RNHL_BACSU3.1e-0728.6814.7 kDa ribonuclease H-like protein OS=Bacillus subtilis (strain 168) OX=224308... [more]
BLAST of Carg26435 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KTZ9|A0A0A0KTZ9_CUCSA6.7e-16478.24Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G489310 PE=4 SV=1[more]
tr|A0A1S3CPT7|A0A1S3CPT7_CUCME1.2e-16076.67uncharacterized protein LOC103503315 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A1S3CQX0|A0A1S3CQX0_CUCME7.2e-15076.65uncharacterized protein LOC103503315 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A1S3CPG2|A0A1S3CPG2_CUCME7.2e-15076.65uncharacterized protein LOC103503315 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A1S3CPE1|A0A1S3CPE1_CUCME7.4e-13175.68uncharacterized protein LOC103503315 isoform X4 OS=Cucumis melo OX=3656 GN=LOC10... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004523RNA-DNA hybrid ribonuclease activity
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf
IPR002156RNaseH_domain
IPR036397RNaseH_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051252 regulation of RNA metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg26435-RACarg26435-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3DG3DSA:3.30.420.10coord: 231..373
e-value: 1.7E-33
score: 117.6
NoneNo IPR availablePFAMPF13456RVT_3coord: 236..369
e-value: 1.4E-26
score: 92.6
NoneNo IPR availablePANTHERPTHR33033:SF30RNASE H DOMAIN-CONTAINING PROTEINcoord: 1..379
NoneNo IPR availablePANTHERPTHR33033FAMILY NOT NAMEDcoord: 1..379
NoneNo IPR availableCDDcd09279RNase_HI_likecoord: 232..369
e-value: 1.03971E-49
score: 164.568
IPR002156Ribonuclease H domainPROSITEPS50879RNASE_Hcoord: 228..371
score: 12.46
IPR012337Ribonuclease H-like superfamilySUPERFAMILYSSF53098Ribonuclease H-likecoord: 231..367