Cla004748 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla004748
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Phosphoglycerate mutase (AHRD V1 *--- C6WMA8_ACTMD); contains Interpro domain(s) IPR012337 Polynucleotidyl transferase, ribonuclease H fold
Location	Chr9 : 32663711 .. 32668345 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACTGCTTCTCCCAGGTCTCTACCTATACTCGGGCCATTTTCAGAAGGACCACTCTTGTGTTTGCGGCTTCGACCTCCATTAATGGCTGCTTTAATTCCTACTGTACCTCAACCTTTAACAACCTCGCTCTTAAGGCTCCTGCTTTAGATTCCTTGTGTTCCAGATTCCGTCTTCGGTGCTATTCCTCTCGTAAACTCCGCAAGGGCACTTCTCCTTCACCCAAGTTAGATTCTGAACCTCCCATGGATTCAGAGATGGGTGACTTCTTTGTAGTTCGAAAGGGGGATGTTGTTGGAGTCTATAAAAGTTTTAGTGATTGTCAGGCGCAAATTGGATCTTCGGTATTCTTTAACTTTCAGTAGTGATTTTTGCCGTTAAATGTATTTGTTGTTCAGCTACTGGCCATGGCCATGGAGTTACATTAGGCTTTTACATTGGTTACATTTAATTGTTTTTGAAGCATGGGCTCAGTGATTGATTAGTTCTTCACTTTCTGCCGGCTGTTTATTGCATAAAGCTTATGAAACTTGAGAAGCATACGTTTTTTTTTTTTTTTTTTGGGTTAATTTTACTCATAGCTGTGGATTTCTTGTAATTGGTGCAGTTCATTAAGTGGATTAAGGTCGGGTGTTATCTTTTCTTTTCTATGGCAGATATGTGATCTTCCTGTTAGCGTGTATAAAGGACACTCATTGCCAAAAGACACTGAGGAATATCTTGCTTCCGTCGGTCTTAAGAATGCTCTATACACTATTAAAGCTGCAGATATGAGACCTGGTCTTTTCGGTTCGCTCGTGCCTTGCACTTTTCATGTATGATGTTTCATTAGTTGGATGAGTTTTGAGTTAAAAGTTTAAGAGACCATTTTCTGTCATGATTTATATAAGAAAATGGTAGGAGGCAGATAATAACTCTGCTCTTTCACTTGAATTATTCGAGCATCCTATTGATTAATATTTCCCAAATAGATCATCCCAGTGTGTTCATTATTGAAGAGGGTGAATTTCTATCCTTTTATCTTCCTTGCCTTAATTATTAGCATGGAATCACAAGTTTTTGTGAGGAAAGAGCATATTATTTTGGTCATCCTAGGTCACCACGTTGAGTTTATACTCCACGTCCTTCCTTACCTTGTAACTTTCTGTTTTGTAGAGAACATGGTTTCTTGTCTTATAGAAGGAATAATATAACTAGTACAATTTGCGCTTTAAAGTCAGACGTTGAAGGCTGTAAACTACAACCACATGAAGCATTTTATACATATCGGTTTTTTCCAATAGCAGAGTTAGGATGTTAGGCTTTCAATGTTGTATTTACGTAGATCCAGTGTTTAGTAGTTGTACTATCAAGAACATCTAAAATATTCCAATCTATCCAGTCTCCTTCCTGTACTATCTTTATTCACTCTAGCACAAGTTTGTATACATTTATAAAATGTTTTTGTTTGCCAGGATGGAGATACTTCTCTTAAAGGCGAGGCTTCTGGCCAGGATGACATAAAGAAGAGATCAAGAGAGGCTATTCTATCAGAAAATATTGTAAGTTGATTTTCATGATAACTTCTAAACTAAAATTTTAACTGAAGCAAATAATGTCTCTATACAAAGTAACTTGCTATACTGTAATTTATTTTTTATTTTTTATTTTTAAAAGAAACATTTTATATATAAAGGGGAAAAAACCCTAAGAAGTACAAGATCTACATGAGCGATAGCCAATTGTTAACTAAAAAAGATAAGCTGAAACAATTAGACGGGGGCTGCGTTTTACACCAAGATAAAGCAGTAGATAAAACATTCTCCATAAAACGAGGAAAAGAGATAAAGGAATCATGAAAAATTCGTCTGTTCCGCTCTCTCCATAAGCCCCATAAGAAATCACGAATAATGACCAACCAAATAGTCTTCTTGGTACCACAAAGGGGTGGCCCACCAACAATGATGCTAAAATCTCCGAGATGTTATTTGGACATGTATATGACCAACCAAAAGCCGGCAAGACAGTATCCCAAAATTTGGTGGCAAAGGAACAATGCATGAACAAATGTACCGGCGACTCTGAATTCGTCTGACACGTATGACACCAAGATGTAGAAAGCGACATATAGGAGGGCATGCGGTGCTGAAGGCGATCAGCAGTATTAATGGCACCCCAGCTCAGCTCCCAGAGAAAATTTTTAATCTTTTTAGGATATTTATCTTTCCATATAACCCTATATAGATCTAATAGACTGATATCCAAATCATCCACCAAATCTGCCATCAAGGATTTGACTGTAAATGTTGAAGAAGAATCATGTCAAGGGAGATGCGCAATCTGATCGGAGCCAGATAGCCAGAAAGGGAAGCCCATTCTGCAATTTCTAATTCAGTATGATTATGACATAGGTTAAGATTCCAAGCAGACGTAGAAGGAACCCAAACATTGGATACCATAGCCTCCGGATGTTGAGTTAGCCGAAAAAGTCGCGGATAGGTAGAAGCAAGAACACCACAACTAAGCCATGATCATGCTAAATAGATGTAGAACCACCATCACCCATGCGACGGGAGACCCGATCCATAACCAAATCCATGTATTGGCAAATGGATCTCCAAGGAACCTTCGAAGACCCACGGGAGGTAGGGGAAGGCCATATACAATTAGGCGAATTATACTTCGCCACAATAAGCTTTCTCCATAAGGCATCAATTTCATTTATGAAACGCCACATTCATTTAGCAAGAAGAGCAGAATTACGATATTTAAAGTTACCAATTCCCATGCCATCCGACAATTGAGGCTGCTGAGAGATGGCCCAGTTTATATTGTGCATACCACCGTCACCTCTTGTACCCTCCCAAAAGAAATTTCGAGTCAGTTTATTAATGCAACTGATAATAGATAAAGGAGCCCGAAACAACGACAAGTAATATGTAGGGAGGCTAGAAAGAGTAGCTTGAATAAGCGTATGTCTCCCCCCTTTTGATATATACACATACTTCAGTTATGAAGGTTTTTGTGATCATGCTTGTTTGCTTGTGGTTTATGTAGATTTAAATGTTTGCAGGGGTCAACTGTTTTAACTCCTACATCAAAAGATCCCTCGAGGAAACATGTCAAGCTGGAAGATTCCATTGTGTCCCGAGCACTATCCTCCAACCGTGTAAGTCATGGTCTTGGCAATGTCATTATGATTGCCCAATTCTGTGAATTGTATACTCTCGTCTGTAGCTCAATATATGGGTTCATGTGATCCAGCATTTATTGCCTAGTGTTGTTTAAGTGGTTGATTAAAAAAGAACTAAGAAGTAAATTACTATATTTGTTAGTTGTCCTCTCAGTCTTATCAACTCTTATTTTAGTCTTTTAGCTAGGAAGTAATTTCTGCTTCTAAACTAGTTATGTATTTGCTTCTATCCTTGTGTTGCTGTAACATCATTCAAAAGATTCCAGCTCAGTGAACCTTCAGAATTTTCACATCATCTGTCAACTAATATCAAGTCATCAATCTCATTAAGATCATTATAAGGTTGTTAACGGGTCGTTCATATACAAAGATATAATTAAGTGTCTGAAATATTACTTGGAATTTAAAAAGGCCAAAATGAAACTAACAAATGGTTTATGGTCCCCTGATGATAATCCTATTTTATACAAAAAAACCGAGGATGCAAACTAGTAGAGTCTCTTTTTAGTTTTGTTTCTAAACCAAGTGATAATCATGCTTTGATTTCATTGTCCAGATTCTGAAATGATCTTTCCAGAATACAATGGAATAGAATCCCTGAGTTTAAATTTTCAACTTACTCGACAGATTTTGATTGCCATAATAATATTTTATGTACAGGAATCTTGCGTTCTAGAATTCGATGGTGCCTCAAAGGGAAATCCTGGACAAGCTGGGGCAGGAGCTGTCCTGCGAGCTCATGATGGGAGTGTGGTATACATTCTTCCTTTTGGAACCCACATTAACATATGTATTCTTATTAATGTGTATCTAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTGAATAGATATGTAGACTGCGTGAAGGCCTAGGTATAGCAACCAATAACGTTGCTGAATATCGAGCTATTCTTTTAGGGTTGAAGTATGCACTTCAGAAAGGGTTCACTAAGATCCACGTCCAAGGTGACTCCAAACTTGTTTGTATGCAGGTTGGTTAAATTTTTTTACCTTACATTTTTTTCTAATTATCATTATTATTTTCTAACTTTGTCAACGTATTTCTTGATGTGTCTACATATTGTAAACTTGTTAAGTAGGTCCCTCTTTGTCTTGGTATATTTAGGAAAAGTTCAGAGGGATGGGTTTAATGGTTGATCTTAGGACTTAGCAAGAAGCTCAAAGCTGAAAACTTTGTACTTAAAGGATTTCTTTTATCATTATTGTTATATTGTAAGAATCATTTGTATTGAAGGGAAATAATTAGTCCAAACTGCATGAAAGTTAATATTGTCATTTCTGATATGAGGAACTTCCCGATAGTACTCCTGGCCCTGGCTTGCAATCTCTCTGTGAAAAGACTATTTCATCGAGGGTTGTACTTCTCTTTTCTTCAAAGGAAGGGAAGGAGACTCAACTTCCTTTCCTCAATGTGCCTGCTCTGTGA

mRNA sequence

ATGAACTGCTTCTCCCAGGTCTCTACCTATACTCGGGCCATTTTCAGAAGGACCACTCTTGTGTTTGCGGCTTCGACCTCCATTAATGGCTGCTTTAATTCCTACTGTACCTCAACCTTTAACAACCTCGCTCTTAAGGCTCCTGCTTTAGATTCCTTGTGTTCCAGATTCCGTCTTCGGTGCTATTCCTCTCGTAAACTCCGCAAGGGCACTTCTCCTTCACCCAAGTTAGATTCTGAACCTCCCATGGATTCAGAGATGGGTGACTTCTTTGTAGTTCGAAAGGGGGATGTTGTTGGAGTCTATAAAAGTTTTAGTGATTGTCAGGCGCAAATTGGATCTTCGATATGTGATCTTCCTGTTAGCGTGTATAAAGGACACTCATTGCCAAAAGACACTGAGGAATATCTTGCTTCCGTCGGTCTTAAGAATGCTCTATACACTATTAAAGCTGCAGATATGAGACCTGGTCTTTTCGGTTCGCTCGTGCCTTGCACTTTTCATGATGGAGATACTTCTCTTAAAGGCGAGGCTTCTGGCCAGGATGACATAAAGAAGAGATCAAGAGAGGCTATTCTATCAGAAAATATTGGGTCAACTGTTTTAACTCCTACATCAAAAGATCCCTCGAGGAAACATGTCAAGCTGGAAGATTCCATTGTGTCCCGAGCACTATCCTCCAACCGTGAATCTTGCGTTCTAGAATTCGATGGTGCCTCAAAGGGAAATCCTGGACAAGCTGGGGCAGGAGCTGTCCTGCGAGCTCATGATGGGAGTGTGGTATACATTCTTCCTTTTGGAACCCACATTAACATATGCCTAGGTATAGCAACCAATAACGTTGCTGAATATCGAGCTATTCTTTTAGGGTTGAAGTATGCACTTCAGAAAGGGTTCACTAAGATCCACGTCCAAGGTGACTCCAAACTTGTTTGTATGCAGGAACTTCCCGATAGTACTCCTGGCCCTGGCTTGCAATCTCTCTGTGAAAAGACTATTTCATCGAGGGTTGTACTTCTCTTTTCTTCAAAGGAAGGGAAGGAGACTCAACTTCCTTTCCTCAATGTGCCTGCTCTGTGA

Coding sequence (CDS)

ATGAACTGCTTCTCCCAGGTCTCTACCTATACTCGGGCCATTTTCAGAAGGACCACTCTTGTGTTTGCGGCTTCGACCTCCATTAATGGCTGCTTTAATTCCTACTGTACCTCAACCTTTAACAACCTCGCTCTTAAGGCTCCTGCTTTAGATTCCTTGTGTTCCAGATTCCGTCTTCGGTGCTATTCCTCTCGTAAACTCCGCAAGGGCACTTCTCCTTCACCCAAGTTAGATTCTGAACCTCCCATGGATTCAGAGATGGGTGACTTCTTTGTAGTTCGAAAGGGGGATGTTGTTGGAGTCTATAAAAGTTTTAGTGATTGTCAGGCGCAAATTGGATCTTCGATATGTGATCTTCCTGTTAGCGTGTATAAAGGACACTCATTGCCAAAAGACACTGAGGAATATCTTGCTTCCGTCGGTCTTAAGAATGCTCTATACACTATTAAAGCTGCAGATATGAGACCTGGTCTTTTCGGTTCGCTCGTGCCTTGCACTTTTCATGATGGAGATACTTCTCTTAAAGGCGAGGCTTCTGGCCAGGATGACATAAAGAAGAGATCAAGAGAGGCTATTCTATCAGAAAATATTGGGTCAACTGTTTTAACTCCTACATCAAAAGATCCCTCGAGGAAACATGTCAAGCTGGAAGATTCCATTGTGTCCCGAGCACTATCCTCCAACCGTGAATCTTGCGTTCTAGAATTCGATGGTGCCTCAAAGGGAAATCCTGGACAAGCTGGGGCAGGAGCTGTCCTGCGAGCTCATGATGGGAGTGTGGTATACATTCTTCCTTTTGGAACCCACATTAACATATGCCTAGGTATAGCAACCAATAACGTTGCTGAATATCGAGCTATTCTTTTAGGGTTGAAGTATGCACTTCAGAAAGGGTTCACTAAGATCCACGTCCAAGGTGACTCCAAACTTGTTTGTATGCAGGAACTTCCCGATAGTACTCCTGGCCCTGGCTTGCAATCTCTCTGTGAAAAGACTATTTCATCGAGGGTTGTACTTCTCTTTTCTTCAAAGGAAGGGAAGGAGACTCAACTTCCTTTCCTCAATGTGCCTGCTCTGTGA

Protein sequence

MNCFSQVSTYTRAIFRRTTLVFAASTSINGCFNSYCTSTFNNLALKAPALDSLCSRFRLRCYSSRKLRKGTSPSPKLDSEPPMDSEMGDFFVVRKGDVVGVYKSFSDCQAQIGSSICDLPVSVYKGHSLPKDTEEYLASVGLKNALYTIKAADMRPGLFGSLVPCTFHDGDTSLKGEASGQDDIKKRSREAILSENIGSTVLTPTSKDPSRKHVKLEDSIVSRALSSNRESCVLEFDGASKGNPGQAGAGAVLRAHDGSVVYILPFGTHINICLGIATNNVAEYRAILLGLKYALQKGFTKIHVQGDSKLVCMQELPDSTPGPGLQSLCEKTISSRVVLLFSSKEGKETQLPFLNVPAL

Homology

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BLAST of Cla004748 vs. Swiss-Prot
Match: Y2228_MYCTU (Uncharacterized protein Rv2228c OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=Rv2228c PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 4.0e-09
Identity = 39/82 (47.56%), Postives = 46/82 (56.10%), Query Frame = 1


Query: 233 VLEFDGASKGNPGQAGAGAVLRAHDGSVVYILPFGTHINICLGIATNNVAEYRAILLGLK 292
           V+E DG S+GNPG AG GAV+   D S V            +G ATNNVAEYR ++ GL 
Sbjct: 4   VIEADGGSRGNPGPAGYGAVVWTADHSTVL-----AESKQAIGRATNNVAEYRGLIAGLD 63

Query: 293 YALQKGFTKIHVQGDSKLVCMQ 315
            A++ G T+  V  DSKLV  Q
Sbjct: 64  DAVKLGATEAAVLMDSKLVVEQ 80

[Close]

BLAST of Cla004748 vs. Swiss-Prot
Match: Y2228_MYCTO (Uncharacterized protein MT2287 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=MT2287 PE=3 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 4.0e-09
Identity = 39/82 (47.56%), Postives = 46/82 (56.10%), Query Frame = 1


Query: 233 VLEFDGASKGNPGQAGAGAVLRAHDGSVVYILPFGTHINICLGIATNNVAEYRAILLGLK 292
           V+E DG S+GNPG AG GAV+   D S V            +G ATNNVAEYR ++ GL 
Sbjct: 4   VIEADGGSRGNPGPAGYGAVVWTADHSTVL-----AESKQAIGRATNNVAEYRGLIAGLD 63

Query: 293 YALQKGFTKIHVQGDSKLVCMQ 315
            A++ G T+  V  DSKLV  Q
Sbjct: 64  DAVKLGATEAAVLMDSKLVVEQ 80

[Close]

BLAST of Cla004748 vs. Swiss-Prot
Match: Y2253_MYCBO (Uncharacterized protein Mb2253c OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=Mb2253c PE=3 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 4.0e-09
Identity = 39/82 (47.56%), Postives = 46/82 (56.10%), Query Frame = 1


Query: 233 VLEFDGASKGNPGQAGAGAVLRAHDGSVVYILPFGTHINICLGIATNNVAEYRAILLGLK 292
           V+E DG S+GNPG AG GAV+   D S V            +G ATNNVAEYR ++ GL 
Sbjct: 4   VIEADGGSRGNPGPAGYGAVVWTADHSTVL-----AESKQAIGRATNNVAEYRGLIAGLD 63

Query: 293 YALQKGFTKIHVQGDSKLVCMQ 315
            A++ G T+  V  DSKLV  Q
Sbjct: 64  DAVKLGATEAAVLMDSKLVVEQ 80

[Close]

BLAST of Cla004748 vs. Swiss-Prot
Match: RNH_HALSA (Ribonuclease HI OS=Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) GN=rnhA PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 3.4e-08
Identity = 35/76 (46.05%), Postives = 43/76 (56.58%), Query Frame = 1


Query: 236 FDGASKGNPGQAGAGAVLRAHDGSVVYILPFGTHINICLGIATNNVAEYRAILLGLKYAL 295
           FDGAS+GNPG A  G VL + DG +V            +G ATNN AEY A++  L+ A 
Sbjct: 74  FDGASRGNPGPAAVGWVLVSGDGGIV------AEGGDTIGRATNNQAEYDALIAALEAAA 133

Query: 296 QKGFTKIHVQGDSKLV 312
             GF  I ++GDS+LV
Sbjct: 134 DFGFDDIELRGDSQLV 143

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BLAST of Cla004748 vs. TrEMBL
Match: A0A0A0KTZ9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G489310 PE=4 SV=1)

HSP 1 Score: 518.1 bits (1333), Expect = 8.7e-144
Identity = 265/317 (83.60%), Postives = 284/317 (89.59%), Query Frame = 1


Query: 1   MNCFSQVSTYTRAIFRRTTLVFAASTSINGCFNSYCTSTFNNLALKAPALDSLCSRFRLR 60
           MNCFSQVSTYTR IFRRT LVFAASTSI+GC N+Y TS+F+N+A+K  ALDSLCSRF LR
Sbjct: 1   MNCFSQVSTYTRVIFRRTNLVFAASTSIHGCSNAYWTSSFHNVAVKTTALDSLCSRFGLR 60

Query: 61  CYSSRKLRKG---TSPSPKLDSEPPMDSEMGDFFVVRKGDVVGVYKSFSDCQAQIGSSIC 120
           CYS+RK RK    TSPSPKLDSEPP++SEMGDFFVVRKGDVVGVYKSFSDCQAQIGSSIC
Sbjct: 61  CYSTRKPRKPRKPTSPSPKLDSEPPVESEMGDFFVVRKGDVVGVYKSFSDCQAQIGSSIC 120

Query: 121 DLPVSVYKGHSLPKDTEEYLASVGLKNALYTIKAADMRPGLFGSLVPCTFHDGDTSLKGE 180
           DLPVSV+KGHSLPKDTEEYLASVGLKNALYTIKAADMRP LFGSL PCTFH GDTSL GE
Sbjct: 121 DLPVSVFKGHSLPKDTEEYLASVGLKNALYTIKAADMRPDLFGSLAPCTFHGGDTSLTGE 180

Query: 181 ASGQDDIKKRSREAILSENIGSTVLTPTSKDPSRKHVKLEDSIVSRALSSNRESCVLEFD 240
            SGQD IKKRSREAI+ EN+GSTVLTPT KDP+RKH+KLEDSIVS ++SSNRESC LEFD
Sbjct: 181 TSGQDAIKKRSREAIVPENVGSTVLTPTLKDPTRKHIKLEDSIVSHSVSSNRESCFLEFD 240

Query: 241 GASKGNPGQAGAGAVLRAHDGSVVYILPFGTHINICLGIATNNVAEYRAILLGLKYALQK 300
           GASKGNPGQAGAGAVLRAHDGSV+  L  G      LGIATNNVAEYRAILLGLK AL+K
Sbjct: 241 GASKGNPGQAGAGAVLRAHDGSVICRLREG------LGIATNNVAEYRAILLGLKSALKK 300

Query: 301 GFTKIHVQGDSKLVCMQ 315
           GFT+IHVQGDSKLVCMQ
Sbjct: 301 GFTRIHVQGDSKLVCMQ 311

[Close]

BLAST of Cla004748 vs. TrEMBL
Match: A0A0D2RNX8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G185700 PE=4 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 1.3e-78
Identity = 172/322 (53.42%), Postives = 214/322 (66.46%), Query Frame = 1


Query: 1   MNCFSQVSTYTRAIFRRTTLVFAASTSINGCFNSYCTSTFNNLALKAPALDSLCSRFRLR 60
           MNC   V  Y  A+FR+    F A+TS+N C        F +  +K   L+ L +RFR +
Sbjct: 1   MNCLPHVRAYGSALFRKAGN-FIATTSLNQCHVPLWRRNFEHAGVKTVDLEFLLTRFRTQ 60

Query: 61  CYSSRKLR-----KGTSPSPKLDSEPP--MDSEMGDFFVVRKGDVVGVYKSFSDCQAQIG 120
           CYSSRK +     K  S + K+  E P  M++E   FFVVRKGD VGV+KSF+DCQAQ+G
Sbjct: 61  CYSSRKSKSSSSTKKASRTKKVHPEQPPVMENEKDAFFVVRKGDTVGVFKSFADCQAQVG 120

Query: 121 SSICDLPVSVYKGHSLPKDTEEYLASVGLKNALYTIKAADMRPGLFGSLVPCTFHDGDTS 180
           SSICD PVSVYKG+SL K+TE YL+S GLKNALYTI+AAD++  LFG+L+PC F +   S
Sbjct: 121 SSICDPPVSVYKGYSLTKETEIYLSSCGLKNALYTIRAADVKEDLFGALMPCPFQE-PAS 180

Query: 181 LKGEASGQDDIKKRSREAILSENIGSTVLTPTS-KDPSRKHVKLEDSIVSRALSSNRESC 240
            KGE S  D  KKR ++ + SE  G   L   +  DP RKH KL+    ++  SS  +SC
Sbjct: 181 SKGETSHNDATKKRPQDMLQSEYGGLGSLGSIAVADPVRKHFKLDPHAEAQITSSGHQSC 240

Query: 241 VLEFDGASKGNPGQAGAGAVLRAHDGSVVYILPFGTHINICLGIATNNVAEYRAILLGLK 300
           +LEFDGASKGNPG AGA AVL+   G+V+  L  G      LGIATNN AEYRAI+LGLK
Sbjct: 241 ILEFDGASKGNPGPAGAAAVLKTDSGNVICKLREG------LGIATNNAAEYRAIILGLK 300

Query: 301 YALQKGFTKIHVQGDSKLVCMQ 315
            AL+KG+T I V+GDSKLVCMQ
Sbjct: 301 QALRKGYTNIRVRGDSKLVCMQ 314

[Close]

BLAST of Cla004748 vs. TrEMBL
Match: B9HVB6_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s10515g PE=4 SV=2)

HSP 1 Score: 300.8 bits (769), Expect = 2.2e-78
Identity = 175/318 (55.03%), Postives = 218/318 (68.55%), Query Frame = 1


Query: 1   MNCFSQVSTYTRAIFRRTTLVFAASTSINGCFNSYCTSTFNNLALKAPALDSLCSRFRLR 60
           MNC S++S+YT +IF RT+  F A+T+ N    S+      +       L+ L +RFR++
Sbjct: 1   MNCLSRLSSYTASIFGRTSH-FIATTATNS-HQSWIPFWRRSCVHPGLHLEFLSTRFRVQ 60

Query: 61  CYSSRKLRKGTSPSPKLDSEPP--MDSEMGDFFVVRKGDVVGVYKSFSDCQAQIGSSICD 120
           CYSSRK     S   K D +P   MD E   FFVVRKGDVVGVYK+F+DCQAQ+GSSICD
Sbjct: 61  CYSSRKPSLKASGKKKKDPQPATVMDHENDAFFVVRKGDVVGVYKNFADCQAQVGSSICD 120

Query: 121 LPVSVYKGHSLPKDTEEYLASVGLKNALYTIKAADMRPGLFGSLVPCTFHDGDTSLKGEA 180
            PVSVYKG+SL KD+E YL S GL+NALYT++AAD++  LFG L+PC F    +S     
Sbjct: 121 PPVSVYKGYSLSKDSEAYLVSHGLQNALYTVRAADLKEDLFGVLMPCPFQQPASS--DAE 180

Query: 181 SGQDDIKKRSREAILSENIGSTVLTPTSKDPS--RKHVKLEDSIVSRALSSNRESCVLEF 240
           + ++D KKRSRE + SE      +T T+   S   KH  L++    +A +SN  SC+LEF
Sbjct: 181 TLKNDTKKRSREVLGSE------ITDTAGSASMMSKHANLDNQAECQAQNSNSRSCLLEF 240

Query: 241 DGASKGNPGQAGAGAVLRAHDGSVVYILPFGTHINICLGIATNNVAEYRAILLGLKYALQ 300
           DGASKGNPGQAGAGAVLR  DGS++  L  G      LGIATNN+AEYRAILLG+KYALQ
Sbjct: 241 DGASKGNPGQAGAGAVLRTDDGSLICRLREG------LGIATNNMAEYRAILLGMKYALQ 300

Query: 301 KGFTKIHVQGDSKLVCMQ 315
           KG+TKI V+GDSKLVCMQ
Sbjct: 301 KGYTKIQVKGDSKLVCMQ 302

[Close]

BLAST of Cla004748 vs. TrEMBL
Match: A0A0B0MTD0_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_25913 PE=4 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 2.2e-78
Identity = 172/320 (53.75%), Postives = 215/320 (67.19%), Query Frame = 1


Query: 1   MNCFSQVSTYTRAIFRRTTLVFAASTSINGCFNSYCTSTFNNLALKAPALDSLCSRFRLR 60
           MNC   V TY  A+FR+       STS+N C        F + ++K   L+ L +RFR +
Sbjct: 1   MNCPPHVQTYGSALFRKAGNFI--STSLNQCHVPLWKRNFEHASVKIVDLEFLLTRFRTQ 60

Query: 61  CYSSRKLR---KGTSPSPKLDSEPP--MDSEMGDFFVVRKGDVVGVYKSFSDCQAQIGSS 120
           CYSSRK     K TS + K+D E P  M++E   FFVVRKGDVVGV+KSF+DCQ Q+GSS
Sbjct: 61  CYSSRKSSSSTKKTSRTKKVDPEQPKVMENEKDAFFVVRKGDVVGVFKSFADCQTQVGSS 120

Query: 121 ICDLPVSVYKGHSLPKDTEEYLASVGLKNALYTIKAADMRPGLFGSLVPCTFHDGDTSLK 180
           ICD PVSVYKG+SL K+TE YL+S GLKNA YTI+AAD++  +FG+L+PC F +   S K
Sbjct: 121 ICDPPVSVYKGYSLTKETEIYLSSYGLKNARYTIRAADVKEDIFGALMPCPFQE-PASSK 180

Query: 181 GEASGQDDIKKRSREAILSENIGSTVLTPTS-KDPSRKHVKLEDSIVSRALSSNRESCVL 240
           GE S  D  KKR ++ + SE  G   L   +  DP RKH KL+    ++  SS  +SC+L
Sbjct: 181 GETSHNDATKKRPQDMLQSEYGGLGSLGSIAVADPVRKHFKLDPHAEAQITSSGHQSCIL 240

Query: 241 EFDGASKGNPGQAGAGAVLRAHDGSVVYILPFGTHINICLGIATNNVAEYRAILLGLKYA 300
           EFDGASKGNPG AGA AVL+   G+V+  L  G      LGIATNN AEYRAI+LGLK+A
Sbjct: 241 EFDGASKGNPGPAGAAAVLKTDAGNVICKLREG------LGIATNNAAEYRAIILGLKHA 300

Query: 301 LQKGFTKIHVQGDSKLVCMQ 315
           L+KG+T I V+GDSKLVCMQ
Sbjct: 301 LRKGYTNIRVRGDSKLVCMQ 311

[Close]

BLAST of Cla004748 vs. TrEMBL
Match: A0A0D2SDN8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G350100 PE=4 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 2.4e-77
Identity = 169/325 (52.00%), Postives = 217/325 (66.77%), Query Frame = 1


Query: 1   MNCFSQVSTYTRAIFRRTTLVFAASTSINGCFNSYCTSTFNNLALKAPALDSLCSRFRLR 60
           MNC   +  Y  A+FR+T      STS+N C        F + ++K   L+ L +RFR +
Sbjct: 1   MNCLPHMHAYGSALFRKTGNFI--STSLNQCHVPLWKRNFEDASVKTVDLEFLLTRFRTQ 60

Query: 61  CYSSRKLR---KGTSPSPKLDSEPP--MDSEMGDFFVVRKGDVVGVYKSFSDCQAQIGSS 120
           CYSSRK     K TS + K+D E P  M++E   FFVVRKGDVVGV+KSF+DCQ Q+GSS
Sbjct: 61  CYSSRKSSSSTKKTSGTKKVDPEQPQVMENEKDAFFVVRKGDVVGVFKSFADCQTQVGSS 120

Query: 121 ICDLPVSVYKGHSLPKDTEEYLASVGLKNALYTIKAADMRPGLFGSLVPCTFHDGDTSLK 180
           ICD PVSVYKG++L K+TE YL+S GLKNA YTI+AAD++  +FG+L+PC F +   S K
Sbjct: 121 ICDPPVSVYKGYALTKETEIYLSSYGLKNARYTIRAADVKEDIFGALMPCPFQE-PASSK 180

Query: 181 GEASGQDDIKKRSREAILSE------NIGSTVLTPTSKDPSRKHVKLEDSIVSRALSSNR 240
           GE S  D  KKR ++ +  E      ++GS  +     D +RKHVKL+    ++  SS  
Sbjct: 181 GETSHYDATKKRPQDMLQLEYGVGLGSLGSIAVA----DLARKHVKLDPHAEAQITSSGH 240

Query: 241 ESCVLEFDGASKGNPGQAGAGAVLRAHDGSVVYILPFGTHINICLGIATNNVAEYRAILL 300
           +SC LEFDGASKGNPG AGA AVL+   G+V+  L  G      LGIATNN AEYRA++L
Sbjct: 241 QSCTLEFDGASKGNPGPAGAAAVLKTDAGNVICKLREG------LGIATNNAAEYRALIL 300

Query: 301 GLKYALQKGFTKIHVQGDSKLVCMQ 315
           GLK+AL+KG+T IHV+GDSKLVCMQ
Sbjct: 301 GLKHALRKGYTNIHVRGDSKLVCMQ 312

[Close]

BLAST of Cla004748 vs. NCBI nr
Match: gi|659131437|ref|XP_008465685.1| (PREDICTED: uncharacterized protein LOC103503315 isoform X4 [Cucumis melo])

HSP 1 Score: 526.9 bits (1356), Expect = 2.7e-146
Identity = 282/352 (80.11%), Postives = 304/352 (86.36%), Query Frame = 1


Query: 1   MNCFSQVSTYTRAIFRRTTLVFAASTSINGCFNSYCTSTFNNLALKAPALDSLCSRFRLR 60
           MNC SQVSTYTR IFRRT LVFAASTSI+GC N Y +STF+N+A+KA ALDSLCSRF LR
Sbjct: 1   MNCLSQVSTYTRVIFRRTNLVFAASTSIHGCSNPYWSSTFHNVAVKATALDSLCSRFGLR 60

Query: 61  CYSSRKLRKG---TSPSPKLDSEPPMDSEMGDFFVVRKGDVVGVYKSFSDCQAQIGSSIC 120
           CYS+RK RK    TSPSPKLDSEPPM+SEMGDFFVVRKGDVVGVYKSFSDC AQIGSSIC
Sbjct: 61  CYSTRKPRKPRKPTSPSPKLDSEPPMESEMGDFFVVRKGDVVGVYKSFSDCHAQIGSSIC 120

Query: 121 DLPVSVYKGHSLPKDTEEYLASVGLKNALYTIKAADMRPGLFGSLVPCTFHDGDTSLKGE 180
           DLPVSV+KGHSLPKD+EEYLAS+GLKNALYTIKAADMRP LFGSLVPCTFHDGD SL GE
Sbjct: 121 DLPVSVFKGHSLPKDSEEYLASIGLKNALYTIKAADMRPDLFGSLVPCTFHDGDASLTGE 180

Query: 181 ASGQDDIKKRSREAILSENIGSTVL-----TPTSKDPSRKHVKLEDSIVSRALSSNRESC 240
            SGQD IKKRSREAI+SEN+GS+VL     TPTS+DP+RKH+KLEDSIVS  LSSN ESC
Sbjct: 181 TSGQDAIKKRSREAIVSENVGSSVLTPTSVTPTSEDPTRKHIKLEDSIVS--LSSNHESC 240

Query: 241 VLEFDGASKGNPGQAGAGAVLRAHDGSVVYILPFGTHINICLGIATNNVAEYRAILLGLK 300
            LEFDGASKGNPGQAGAGAVLRAHDGSV+  L  G      LGIATNNVAEYRAILLGLK
Sbjct: 241 FLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREG------LGIATNNVAEYRAILLGLK 300

Query: 301 YALQKGFTKIHVQGDSKLVCMQELPDSTPGPGLQSLCEKTISSRVVLLFSSK 345
           +AL+KGFT+IHVQGDSKLVCMQ LP      GL   C++TISSRVVLLFSSK
Sbjct: 301 FALKKGFTRIHVQGDSKLVCMQ-LPIVL--LGLTCDCQRTISSRVVLLFSSK 341

[Close]

BLAST of Cla004748 vs. NCBI nr
Match: gi|449452100|ref|XP_004143798.1| (PREDICTED: uncharacterized protein LOC101210930 isoform X1 [Cucumis sativus])

HSP 1 Score: 518.1 bits (1333), Expect = 1.2e-143
Identity = 265/317 (83.60%), Postives = 284/317 (89.59%), Query Frame = 1


Query: 1   MNCFSQVSTYTRAIFRRTTLVFAASTSINGCFNSYCTSTFNNLALKAPALDSLCSRFRLR 60
           MNCFSQVSTYTR IFRRT LVFAASTSI+GC N+Y TS+F+N+A+K  ALDSLCSRF LR
Sbjct: 1   MNCFSQVSTYTRVIFRRTNLVFAASTSIHGCSNAYWTSSFHNVAVKTTALDSLCSRFGLR 60

Query: 61  CYSSRKLRKG---TSPSPKLDSEPPMDSEMGDFFVVRKGDVVGVYKSFSDCQAQIGSSIC 120
           CYS+RK RK    TSPSPKLDSEPP++SEMGDFFVVRKGDVVGVYKSFSDCQAQIGSSIC
Sbjct: 61  CYSTRKPRKPRKPTSPSPKLDSEPPVESEMGDFFVVRKGDVVGVYKSFSDCQAQIGSSIC 120

Query: 121 DLPVSVYKGHSLPKDTEEYLASVGLKNALYTIKAADMRPGLFGSLVPCTFHDGDTSLKGE 180
           DLPVSV+KGHSLPKDTEEYLASVGLKNALYTIKAADMRP LFGSL PCTFH GDTSL GE
Sbjct: 121 DLPVSVFKGHSLPKDTEEYLASVGLKNALYTIKAADMRPDLFGSLAPCTFHGGDTSLTGE 180

Query: 181 ASGQDDIKKRSREAILSENIGSTVLTPTSKDPSRKHVKLEDSIVSRALSSNRESCVLEFD 240
            SGQD IKKRSREAI+ EN+GSTVLTPT KDP+RKH+KLEDSIVS ++SSNRESC LEFD
Sbjct: 181 TSGQDAIKKRSREAIVPENVGSTVLTPTLKDPTRKHIKLEDSIVSHSVSSNRESCFLEFD 240

Query: 241 GASKGNPGQAGAGAVLRAHDGSVVYILPFGTHINICLGIATNNVAEYRAILLGLKYALQK 300
           GASKGNPGQAGAGAVLRAHDGSV+  L  G      LGIATNNVAEYRAILLGLK AL+K
Sbjct: 241 GASKGNPGQAGAGAVLRAHDGSVICRLREG------LGIATNNVAEYRAILLGLKSALKK 300

Query: 301 GFTKIHVQGDSKLVCMQ 315
           GFT+IHVQGDSKLVCMQ
Sbjct: 301 GFTRIHVQGDSKLVCMQ 311

[Close]

BLAST of Cla004748 vs. NCBI nr
Match: gi|778703066|ref|XP_011655308.1| (PREDICTED: uncharacterized protein LOC101210930 isoform X2 [Cucumis sativus])

HSP 1 Score: 518.1 bits (1333), Expect = 1.2e-143
Identity = 265/317 (83.60%), Postives = 284/317 (89.59%), Query Frame = 1


Query: 1   MNCFSQVSTYTRAIFRRTTLVFAASTSINGCFNSYCTSTFNNLALKAPALDSLCSRFRLR 60
           MNCFSQVSTYTR IFRRT LVFAASTSI+GC N+Y TS+F+N+A+K  ALDSLCSRF LR
Sbjct: 1   MNCFSQVSTYTRVIFRRTNLVFAASTSIHGCSNAYWTSSFHNVAVKTTALDSLCSRFGLR 60

Query: 61  CYSSRKLRKG---TSPSPKLDSEPPMDSEMGDFFVVRKGDVVGVYKSFSDCQAQIGSSIC 120
           CYS+RK RK    TSPSPKLDSEPP++SEMGDFFVVRKGDVVGVYKSFSDCQAQIGSSIC
Sbjct: 61  CYSTRKPRKPRKPTSPSPKLDSEPPVESEMGDFFVVRKGDVVGVYKSFSDCQAQIGSSIC 120

Query: 121 DLPVSVYKGHSLPKDTEEYLASVGLKNALYTIKAADMRPGLFGSLVPCTFHDGDTSLKGE 180
           DLPVSV+KGHSLPKDTEEYLASVGLKNALYTIKAADMRP LFGSL PCTFH GDTSL GE
Sbjct: 121 DLPVSVFKGHSLPKDTEEYLASVGLKNALYTIKAADMRPDLFGSLAPCTFHGGDTSLTGE 180

Query: 181 ASGQDDIKKRSREAILSENIGSTVLTPTSKDPSRKHVKLEDSIVSRALSSNRESCVLEFD 240
            SGQD IKKRSREAI+ EN+GSTVLTPT KDP+RKH+KLEDSIVS ++SSNRESC LEFD
Sbjct: 181 TSGQDAIKKRSREAIVPENVGSTVLTPTLKDPTRKHIKLEDSIVSHSVSSNRESCFLEFD 240

Query: 241 GASKGNPGQAGAGAVLRAHDGSVVYILPFGTHINICLGIATNNVAEYRAILLGLKYALQK 300
           GASKGNPGQAGAGAVLRAHDGSV+  L  G      LGIATNNVAEYRAILLGLK AL+K
Sbjct: 241 GASKGNPGQAGAGAVLRAHDGSVICRLREG------LGIATNNVAEYRAILLGLKSALKK 300

Query: 301 GFTKIHVQGDSKLVCMQ 315
           GFT+IHVQGDSKLVCMQ
Sbjct: 301 GFTRIHVQGDSKLVCMQ 311

[Close]

BLAST of Cla004748 vs. NCBI nr
Match: gi|659131435|ref|XP_008465684.1| (PREDICTED: uncharacterized protein LOC103503315 isoform X3 [Cucumis melo])

HSP 1 Score: 507.3 bits (1305), Expect = 2.2e-140
Identity = 264/322 (81.99%), Postives = 284/322 (88.20%), Query Frame = 1


Query: 1   MNCFSQVSTYTRAIFRRTTLVFAASTSINGCFNSYCTSTFNNLALKAPALDSLCSRFRLR 60
           MNC SQVSTYTR IFRRT LVFAASTSI+GC N Y +STF+N+A+KA ALDSLCSRF LR
Sbjct: 1   MNCLSQVSTYTRVIFRRTNLVFAASTSIHGCSNPYWSSTFHNVAVKATALDSLCSRFGLR 60

Query: 61  CYSSRKLRKG---TSPSPKLDSEPPMDSEMGDFFVVRKGDVVGVYKSFSDCQAQIGSSIC 120
           CYS+RK RK    TSPSPKLDSEPPM+SEMGDFFVVRKGDVVGVYKSFSDC AQIGSSIC
Sbjct: 61  CYSTRKPRKPRKPTSPSPKLDSEPPMESEMGDFFVVRKGDVVGVYKSFSDCHAQIGSSIC 120

Query: 121 DLPVSVYKGHSLPKDTEEYLASVGLKNALYTIKAADMRPGLFGSLVPCTFHDGDTSLKGE 180
           DLPVSV+KGHSLPKD+EEYLAS+GLKNALYTIKAADMRP LFGSLVPCTFHDGD SL GE
Sbjct: 121 DLPVSVFKGHSLPKDSEEYLASIGLKNALYTIKAADMRPDLFGSLVPCTFHDGDASLTGE 180

Query: 181 ASGQDDIKKRSREAILSENIGSTVL-----TPTSKDPSRKHVKLEDSIVSRALSSNRESC 240
            SGQD IKKRSREAI+SEN+GS+VL     TPTS+DP+RKH+KLEDSIVS  LSSN ESC
Sbjct: 181 TSGQDAIKKRSREAIVSENVGSSVLTPTSVTPTSEDPTRKHIKLEDSIVS--LSSNHESC 240

Query: 241 VLEFDGASKGNPGQAGAGAVLRAHDGSVVYILPFGTHINICLGIATNNVAEYRAILLGLK 300
            LEFDGASKGNPGQAGAGAVLRAHDGSV+  L  G      LGIATNNVAEYRAILLGLK
Sbjct: 241 FLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREG------LGIATNNVAEYRAILLGLK 300

Query: 301 YALQKGFTKIHVQGDSKLVCMQ 315
           +AL+KGFT+IHVQGDSKLVCMQ
Sbjct: 301 FALKKGFTRIHVQGDSKLVCMQ 314

[Close]

BLAST of Cla004748 vs. NCBI nr
Match: gi|659131433|ref|XP_008465683.1| (PREDICTED: uncharacterized protein LOC103503315 isoform X2 [Cucumis melo])

HSP 1 Score: 507.3 bits (1305), Expect = 2.2e-140
Identity = 264/322 (81.99%), Postives = 284/322 (88.20%), Query Frame = 1


Query: 1   MNCFSQVSTYTRAIFRRTTLVFAASTSINGCFNSYCTSTFNNLALKAPALDSLCSRFRLR 60
           MNC SQVSTYTR IFRRT LVFAASTSI+GC N Y +STF+N+A+KA ALDSLCSRF LR
Sbjct: 1   MNCLSQVSTYTRVIFRRTNLVFAASTSIHGCSNPYWSSTFHNVAVKATALDSLCSRFGLR 60

Query: 61  CYSSRKLRKG---TSPSPKLDSEPPMDSEMGDFFVVRKGDVVGVYKSFSDCQAQIGSSIC 120
           CYS+RK RK    TSPSPKLDSEPPM+SEMGDFFVVRKGDVVGVYKSFSDC AQIGSSIC
Sbjct: 61  CYSTRKPRKPRKPTSPSPKLDSEPPMESEMGDFFVVRKGDVVGVYKSFSDCHAQIGSSIC 120

Query: 121 DLPVSVYKGHSLPKDTEEYLASVGLKNALYTIKAADMRPGLFGSLVPCTFHDGDTSLKGE 180
           DLPVSV+KGHSLPKD+EEYLAS+GLKNALYTIKAADMRP LFGSLVPCTFHDGD SL GE
Sbjct: 121 DLPVSVFKGHSLPKDSEEYLASIGLKNALYTIKAADMRPDLFGSLVPCTFHDGDASLTGE 180

Query: 181 ASGQDDIKKRSREAILSENIGSTVL-----TPTSKDPSRKHVKLEDSIVSRALSSNRESC 240
            SGQD IKKRSREAI+SEN+GS+VL     TPTS+DP+RKH+KLEDSIVS  LSSN ESC
Sbjct: 181 TSGQDAIKKRSREAIVSENVGSSVLTPTSVTPTSEDPTRKHIKLEDSIVS--LSSNHESC 240

Query: 241 VLEFDGASKGNPGQAGAGAVLRAHDGSVVYILPFGTHINICLGIATNNVAEYRAILLGLK 300
            LEFDGASKGNPGQAGAGAVLRAHDGSV+  L  G      LGIATNNVAEYRAILLGLK
Sbjct: 241 FLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREG------LGIATNNVAEYRAILLGLK 300

Query: 301 YALQKGFTKIHVQGDSKLVCMQ 315
           +AL+KGFT+IHVQGDSKLVCMQ
Sbjct: 301 FALKKGFTRIHVQGDSKLVCMQ 314

The following BLAST results are available for this feature:

BLAST of Cla004748 vs. Swiss-Prot


Match Name	E-value	Identity	Description
Y2228_MYCTU	4.0e-09	47.56	Uncharacterized protein Rv2228c OS=Mycobacterium tuberculosis (strain ATCC 25618...	[more]
Y2228_MYCTO	4.0e-09	47.56	Uncharacterized protein MT2287 OS=Mycobacterium tuberculosis (strain CDC 1551 / ...	[more]
Y2253_MYCBO	4.0e-09	47.56	Uncharacterized protein Mb2253c OS=Mycobacterium bovis (strain ATCC BAA-935 / AF...	[more]
RNH_HALSA	3.4e-08	46.05	Ribonuclease HI OS=Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC...	[more]

BLAST of Cla004748 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KTZ9_CUCSA	8.7e-144	83.60	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G489310 PE=4 SV=1	[more]
A0A0D2RNX8_GOSRA	1.3e-78	53.42	Uncharacterized protein OS=Gossypium raimondii GN=B456_005G185700 PE=4 SV=1	[more]
B9HVB6_POPTR	2.2e-78	55.03	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s10515g PE=4 SV=2	[more]
A0A0B0MTD0_GOSAR	2.2e-78	53.75	Uncharacterized protein OS=Gossypium arboreum GN=F383_25913 PE=4 SV=1	[more]
A0A0D2SDN8_GOSRA	2.4e-77	52.00	Uncharacterized protein OS=Gossypium raimondii GN=B456_009G350100 PE=4 SV=1	[more]

BLAST of Cla004748 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659131437\|ref\|XP_008465685.1\|	2.7e-146	80.11	PREDICTED: uncharacterized protein LOC103503315 isoform X4 [Cucumis melo]	[more]
gi\|449452100\|ref\|XP_004143798.1\|	1.2e-143	83.60	PREDICTED: uncharacterized protein LOC101210930 isoform X1 [Cucumis sativus]	[more]
gi\|778703066\|ref\|XP_011655308.1\|	1.2e-143	83.60	PREDICTED: uncharacterized protein LOC101210930 isoform X2 [Cucumis sativus]	[more]
gi\|659131435\|ref\|XP_008465684.1\|	2.2e-140	81.99	PREDICTED: uncharacterized protein LOC103503315 isoform X3 [Cucumis melo]	[more]
gi\|659131433\|ref\|XP_008465683.1\|	2.2e-140	81.99	PREDICTED: uncharacterized protein LOC103503315 isoform X2 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR011320	RNase_H1_N
IPR012337	RNaseH-like_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051252	regulation of RNA metabolic process
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla004748	Cla004748.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011320	Ribonuclease H1, N-terminal	GENE3D	G3DSA:3.40.970.10		coord: 88..138 score: 4.
IPR012337	Ribonuclease H-like domain	GENE3D	G3DSA:3.30.420.10		coord: 231..312 score: 3.9
IPR012337	Ribonuclease H-like domain	unknown	SSF53098	Ribonuclease H-like	coord: 231..313 score: 3.92
None	No IPR available	PANTHER	PTHR33033	FAMILY NOT NAMED	coord: 232..314 score: 4.4E-75coord: 83..209 score: 4.4
None	No IPR available	PANTHER	PTHR33033:SF11	RNASE H DOMAIN-CONTAINING PROTEIN	coord: 232..314 score: 4.4E-75coord: 83..209 score: 4.4
None	No IPR available	PFAM	PF13456	RVT_3	coord: 236..314 score: 2.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla004748	Cla97C09G182090	Watermelon (97103) v2	wmwmbB042
Cla004748	Csa5G489310	Cucumber (Chinese Long) v2	cuwmB363
Cla004748	MELO3C002906	Melon (DHL92) v3.5.1	mewmB003
Cla004748	ClCG09G020670	Watermelon (Charleston Gray)	wcgwmB008
Cla004748	CSPI05G16700	Wild cucumber (PI 183967)	cpiwmB369
Cla004748	CmoCh05G009200	Cucurbita moschata (Rifu)	cmowmB744
Cla004748	Lsi02G017240	Bottle gourd (USVL1VR-Ls)	lsiwmB170
Cla004748	MELO3C002906.2	Melon (DHL92) v3.6.1	medwmB001
Cla004748	CsaV3_5G025720	Cucumber (Chinese Long) v3	cucwmB387
Cla004748	Bhi06G000551	Wax gourd	wgowmB120

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla004748	Cucumber (Gy14) v2	cgybwmB339
Cla004748	Cucumber (Gy14) v1	cgywmB507
Cla004748	Cucurbita maxima (Rimu)	cmawmB650
Cla004748	Cucurbita moschata (Rifu)	cmowmB131
Cla004748	Cucurbita pepo (Zucchini)	cpewmB379