MELO3C001943.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C001943.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	17. class I heat shock protein
Location	chr12 : 27285663 .. 27286999 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAAAGGTGAACCATCGGGTGTGTTGTACGAGGAATTTGAGCCTTTCTGCAAATGGAAAAAACTCGAAGACTCTGACGTTCTTGAGGTTCATCTCCCAGGTATAATTTATCAACTTACGGTTTTCTCTGCATTCTCATTATATTCCCAGTGATTTGAAATTCAAAACCGCACTTGTGAACAGAATTTAAGAAAGAAGAATTGAGGGTTCGGATAAAAAACAACTCTATCCTGACGCTTTCCGGTGAGCACCTGACAGCCAAAGATGGGAAGAAAATGCATTTCAACAGAGAAATCAAACTCCCAAAGGATATATACCCAGACGAAATTCGTGCTAAATTTGGTGGCAATGTTCTTTCAATCACAATGCCTAAGAAAGCTAGCCCGCCAGAAATCAGCAAACCAAACCCGGACAATGCCTCTGAGGATAAACTAACACAATCCAATGGTAATGGTAAGCCAAAGAACTTCATATCCAGGTTAAAAAGTCCATTGTCGAGGTTGAAATTTAGCAAGGAAACGGCAACGGCTATGGCAGTGGCGGTGGTGATTCTGGCCGTTGGAGTTTACTACTTGATTAAAAACTAAGAATGAAGCATATATATATATTTCTTTGTGTGAAATACATATATAGAATCAAACCTTTACAAATTTCAACTTGAATTCATGAATAAACAATTCATTTGCTAAGATCCTAATTAACCCTCCTTGATTTCTGCAATTTCTTTGAACCTCGGGATAGCCATCAATCCCCATAGCTGAGAAACTGACAGTTCAAACGGTGGGGGATTCCCAGATTATCCACTTTGATTTTATATTTGATGGTTTGTGTTTGTGTTCATAGGTAAAGGACAAGGAATTAATACTTGCATTGTATTTAGTATAAAGATTGATATGACATCTTAACCGTGCGTCGGTATCACCAATTCGAATTTGTATCCAATTCTAGACACGTTACTTTGCATCAATGTATGTTCTTAATTAGGTAGTCCCACAATCTGTGTCTTTTCTGCCAATGACCAATCATAATCAAGATCAAATATATATAAAACAAGGATATGAAAGAGATGAAATACATCTCCCACGTCCCAAGGAATATCTACCTTTTCTTCAATCACCTGAATGAAATCAATAGTTTGAAAAGGACACTGGAATGGTAATGGCTAACAACATCAACTTCTTGGAGGTTCTTATTTAAGTTCGAGATATCAATTTTGTACCCCTCACTATTCCTATCCACAACCCTTGTCTATGAGACAGAGAGAGTATTGTTTTTCATTGAGCTGTAGACCAATACACTGAATAATAATAATCAACCAGAATTTCTTTCGAATA

mRNA sequence

ATGGAGAAAGGTGAACCATCGGGTGTGTTGTACGAGGAATTTGAGCCTTTCTGCAAATGGAAAAAACTCGAAGACTCTGACGTTCTTGAGGTTCATCTCCCAGAATTTAAGAAAGAAGAATTGAGGGTTCGGATAAAAAACAACTCTATCCTGACGCTTTCCGGTGAGCACCTGACAGCCAAAGATGGGAAGAAAATGCATTTCAACAGAGAAATCAAACTCCCAAAGGATATATACCCAGACGAAATTCGTGCTAAATTTGGTGGCAATGTTCTTTCAATCACAATGCCTAAGAAAGCTAGCCCGCCAGAAATCAGCAAACCAAACCCGGACAATGCCTCTGAGGATAAACTAACACAATCCAATGGTAATGGTAAGCCAAAGAACTTCATATCCAGGTTAAAAAGTCCATTGTCGAGGTTGAAATTTAGCAAGGAAACGGCAACGGCTATGGCAGTGGCGGTGGTGATTCTGGCCGTTGGAGTTTACTACTTGATTAAAAACTAAGAATGAAGCATATATATATATTTCTTTGTGTGAAATACATATATAGAATCAAACCTTTACAAATTTCAACTTGAATTCATGAATAAACAATTCATTTGCTAAGATCCTAATTAACCCTCCTTGATTTCTGCAATTTCTTTGAACCTCGGGATAGCCATCAATCCCCATAGCTGAGAAACTGACAGTTCAAACGGTGGGGGATTCCCAGATTATCCACTTTGATTTTATATTTGATGGTTTGTGTTTGTGTTCATAGGTAAAGGACAAGGAATTAATACTTGCATTGTATTTAGTATAAAGATTGATATGACATCTTAACCGTGCGTCGGTATCACCAATTCGAATTTGTATCCAATTCTAGACACGTTACTTTGCATCAATGTATGTTCTTAATTAGGTAGTCCCACAATCTGTGTCTTTTCTGCCAATGACCAATCATAATCAAGATCAAATATATATAAAACAAGGATATGAAAGAGATGAAATACATCTCCCACGTCCCAAGGAATATCTACCTTTTCTTCAATCACCTGAATGAAATCAATAGTTTGAAAAGGACACTGGAATGGTAATGGCTAACAACATCAACTTCTTGGAGGTTCTTATTTAAGTTCGAGATATCAATTTTGTACCCCTCACTATTCCTATCCACAACCCTTGTCTATGAGACAGAGAGAGTATTGTTTTTCATTGAGCTGTAGACCAATACACTGAATAATAATAATCAACCAGAATTTCTTTCGAATA

Coding sequence (CDS)

ATGGAGAAAGGTGAACCATCGGGTGTGTTGTACGAGGAATTTGAGCCTTTCTGCAAATGGAAAAAACTCGAAGACTCTGACGTTCTTGAGGTTCATCTCCCAGAATTTAAGAAAGAAGAATTGAGGGTTCGGATAAAAAACAACTCTATCCTGACGCTTTCCGGTGAGCACCTGACAGCCAAAGATGGGAAGAAAATGCATTTCAACAGAGAAATCAAACTCCCAAAGGATATATACCCAGACGAAATTCGTGCTAAATTTGGTGGCAATGTTCTTTCAATCACAATGCCTAAGAAAGCTAGCCCGCCAGAAATCAGCAAACCAAACCCGGACAATGCCTCTGAGGATAAACTAACACAATCCAATGGTAATGGTAAGCCAAAGAACTTCATATCCAGGTTAAAAAGTCCATTGTCGAGGTTGAAATTTAGCAAGGAAACGGCAACGGCTATGGCAGTGGCGGTGGTGATTCTGGCCGTTGGAGTTTACTACTTGATTAAAAACTAA

Protein sequence

MEKGEPSGVLYEEFEPFCKWKKLEDSDVLEVHLPEFKKEELRVRIKNNSILTLSGEHLTAKDGKKMHFNREIKLPKDIYPDEIRAKFGGNVLSITMPKKASPPEISKPNPDNASEDKLTQSNGNGKPKNFISRLKSPLSRLKFSKETATAMAVAVVILAVGVYYLIKN

Homology

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BLAST of MELO3C001943.2 vs. NCBI nr
Match: XP_008465577.1 (PREDICTED: 16.9 kDa class I heat shock protein 1 [Cucumis melo])

HSP 1 Score: 332.0 bits (850), Expect = 1.2e-87
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MEKGEPSGVLYEEFEPFCKWKKLEDSDVLEVHLPEFKKEELRVRIKNNSILTLSGEHLTA 60
           MEKGEPSGVLYEEFEPFCKWKKLEDSDVLEVHLPEFKKEELRVRIKNNSILTLSGEHLTA
Sbjct: 1   MEKGEPSGVLYEEFEPFCKWKKLEDSDVLEVHLPEFKKEELRVRIKNNSILTLSGEHLTA 60

Query: 61  KDGKKMHFNREIKLPKDIYPDEIRAKFGGNVLSITMPKKASPPEISKPNPDNASEDKLTQ 120
           KDGKKMHFNREIKLPKDIYPDEIRAKFGGNVLSITMPKKASPPEISKPNPDNASEDKLTQ
Sbjct: 61  KDGKKMHFNREIKLPKDIYPDEIRAKFGGNVLSITMPKKASPPEISKPNPDNASEDKLTQ 120

Query: 121 SNGNGKPKNFISRLKSPLSRLKFSKETATAMAVAVVILAVGVYYLIKN 169
           SNGNGKPKNFISRLKSPLSRLKFSKETATAMAVAVVILAVGVYYLIKN
Sbjct: 121 SNGNGKPKNFISRLKSPLSRLKFSKETATAMAVAVVILAVGVYYLIKN 168

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BLAST of MELO3C001943.2 vs. NCBI nr
Match: XP_004137386.1 (PREDICTED: 18.1 kDa class I heat shock protein [Cucumis sativus] >KGN63957.1 hypothetical protein Csa_1G031780 [Cucumis sativus])

HSP 1 Score: 304.3 bits (778), Expect = 2.6e-79
Identity = 151/168 (89.88%), Postives = 161/168 (95.83%), Query Frame = 0


Query: 1   MEKGEPSGVLYEEFEPFCKWKKLEDSDVLEVHLPEFKKEELRVRIKNNSILTLSGEHLTA 60
           MEKGEPS VLY +FEP+C+WKK+EDSDVLEV LPEFKKEELRVRIKNNSILT+SGE L A
Sbjct: 1   MEKGEPSDVLYVKFEPYCQWKKIEDSDVLEVQLPEFKKEELRVRIKNNSILTISGEQLAA 60

Query: 61  KDGKKMHFNREIKLPKDIYPDEIRAKFGGNVLSITMPKKASPPEISKPNPDNASEDKLTQ 120
           KDGKKMHFNR+IKLPKD++PDEIRAKFGGN+LSITMPKKASPPEISKPNPDNASEDKLTQ
Sbjct: 61  KDGKKMHFNRDIKLPKDVFPDEIRAKFGGNILSITMPKKASPPEISKPNPDNASEDKLTQ 120

Query: 121 SNGNGKPKNFISRLKSPLSRLKFSKETATAMAVAVVILAVGVYYLIKN 169
           SNGNGKPKNFIS+LKSPLSRLKFSK TATAMA AVVILAVGVYYLIKN
Sbjct: 121 SNGNGKPKNFISKLKSPLSRLKFSKATATAMATAVVILAVGVYYLIKN 168

[Close]

BLAST of MELO3C001943.2 vs. NCBI nr
Match: XP_023001660.1 (17.8 kDa class I heat shock protein-like [Cucurbita maxima])

HSP 1 Score: 255.0 bits (650), Expect = 1.8e-64
Identity = 133/170 (78.24%), Postives = 143/170 (84.12%), Query Frame = 0


Query: 1   MEKGEPSGVLYEEFEPFCKWKKLEDSD--VLEVHLPEFKKEELRVRIKNNSILTLSGEHL 60
           MEKGE S V YEEFEPFCKWKKL+DSD  VLEVHLPEFKKEELRVRIKNNSIL +SGEHL
Sbjct: 1   MEKGEASNVSYEEFEPFCKWKKLDDSDVHVLEVHLPEFKKEELRVRIKNNSILAISGEHL 60

Query: 61  TAKDGKKMHFNREIKLPKDIYPDEIRAKFGGNVLSITMPKKASPPEISKPNPDNASEDKL 120
           TA DGKKM FNREIKLPKDIYPD+IRAKFGG+VLSITMPKK S  EI KP  D ASE   
Sbjct: 61  TANDGKKMQFNREIKLPKDIYPDQIRAKFGGSVLSITMPKKPSSAEIGKPKADAASEGND 120

Query: 121 TQSNGNGKPKNFISRLKSPLSRLKFSKETATAMAVAVVILAVGVYYLIKN 169
           T  N +G+PKN ISRL SPLSRLKFSK+ ATA+A AV+ILA G YYL+KN
Sbjct: 121 TAPNDDGEPKNLISRLTSPLSRLKFSKKKATALAAAVLILAFGAYYLVKN 170

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BLAST of MELO3C001943.2 vs. NCBI nr
Match: XP_023520341.1 (17.8 kDa class I heat shock protein-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 251.1 bits (640), Expect = 2.6e-63
Identity = 135/170 (79.41%), Postives = 142/170 (83.53%), Query Frame = 0


Query: 1   MEKGEPSGVLYEEFEPFCKWKKLEDSD--VLEVHLPEFKKEELRVRIKNNSILTLSGEHL 60
           MEKGE S V YEEFEPFCKWKKL+DSD  VLEVHLPEFKKEELRVRIKNNSIL +SGEHL
Sbjct: 1   MEKGEASNVSYEEFEPFCKWKKLDDSDVHVLEVHLPEFKKEELRVRIKNNSILAISGEHL 60

Query: 61  TAKDGKKMHFNREIKLPKDIYPDEIRAKFGGNVLSITMPKKASPPEISKPNPDNASEDKL 120
            A DGKKM FNREIKLPKDIYPD+IRAKFGG+VLSITMPKK S  EI KP  D ASE   
Sbjct: 61  -ANDGKKMQFNREIKLPKDIYPDQIRAKFGGSVLSITMPKKPSSAEIGKPKADAASEGND 120

Query: 121 TQSNGNGKPKNFISRLKSPLSRLKFSKETATAMAVAVVILAVGVYYLIKN 169
           T  N +GKPKN ISRL SPLSRLKFSK+ ATA+A AVVILA G YYLIKN
Sbjct: 121 TAPNDDGKPKNLISRLTSPLSRLKFSKKKATALAAAVVILAFGAYYLIKN 169

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BLAST of MELO3C001943.2 vs. NCBI nr
Match: XP_022923784.1 (17.8 kDa class I heat shock protein-like [Cucurbita moschata])

HSP 1 Score: 250.4 bits (638), Expect = 4.4e-63
Identity = 135/170 (79.41%), Postives = 142/170 (83.53%), Query Frame = 0


Query: 1   MEKGEPSGVLYEEFEPFCKWKKLEDSD--VLEVHLPEFKKEELRVRIKNNSILTLSGEHL 60
           MEKGE S V YEEFEPFCKWKKL+DSD  VLEVHLPEFKKEELRVRIKNNSIL +SGEHL
Sbjct: 1   MEKGEASNVSYEEFEPFCKWKKLDDSDVHVLEVHLPEFKKEELRVRIKNNSILAISGEHL 60

Query: 61  TAKDGKKMHFNREIKLPKDIYPDEIRAKFGGNVLSITMPKKASPPEISKPNPDNASEDKL 120
            A DGKKM FNREIKLPKDIYPD+IRAKFGG+VLSITMPKK S  E SKP  D ASE   
Sbjct: 61  -ANDGKKMQFNREIKLPKDIYPDQIRAKFGGSVLSITMPKKPSSAESSKPKADAASEGND 120

Query: 121 TQSNGNGKPKNFISRLKSPLSRLKFSKETATAMAVAVVILAVGVYYLIKN 169
           T  N +GKPKN ISRL SPLSRLKFSK+ ATA+A AVVILA G YYLIKN
Sbjct: 121 TAPNDDGKPKNLISRLTSPLSRLKFSKKKATALAAAVVILAFGAYYLIKN 169

[Close]

BLAST of MELO3C001943.2 vs. TAIR10
Match: AT1G54400.1 (HSP20-like chaperones superfamily protein)

HSP 1 Score: 87.0 bits (214), Expect = 1.2e-17
Identity = 59/170 (34.71%), Postives = 88/170 (51.76%), Query Frame = 0


Query: 11  YEEFEPFCKWKKLEDSDVLEVHLPE-FKKEELRVRIKNNSILTLSGEHLTAKDGKKMHFN 70
           Y+E EPFC+W++ ED D+LE+HLP   KKE L+++I N+ +LT++G        K + F 
Sbjct: 13  YDEIEPFCRWRRTEDIDILELHLPSGLKKEHLKIQINNSGVLTITG-GCPVDQTKTIRFM 72

Query: 71  REIKLPKDIYPDEIRAKFGGNVLSITMPK------------KASPPEISKPNPDNASEDK 130
           +E K+ KD   +EIRAKF   VL +TMPK            K + P+   P  D    + 
Sbjct: 73  KETKVAKDCKRNEIRAKFSKGVLYVTMPKTIPIAAGLSVSLKGATPQHQTPKTDEGMRNV 132

Query: 131 LTQSNGNGKPKNFISRLKSPLSRLKFSKETATAMAVAVVILAVGVYYLIK 168
              S+       F S+  S   RL   ++T      AVV++A  V  ++K
Sbjct: 133 ANCSS------EFYSKFGSLKQRL--WRKTVVEGVAAVVVVAAAVLGVVK 173

[Close]

BLAST of MELO3C001943.2 vs. TAIR10
Match: AT5G20970.1 (HSP20-like chaperones superfamily protein)

HSP 1 Score: 66.2 bits (160), Expect = 2.1e-11
Identity = 39/102 (38.24%), Postives = 55/102 (53.92%), Query Frame = 0


Query: 10  LYEEFEPFCKWKKLEDSDVLEVHLPEFKKEELRVRIKNNSILTLSGEHLTAKDGKKMHFN 69
           +Y+EFEP  +W    D++VL   LP FKKE+L+V +     L L+GE  T    K + F+
Sbjct: 9   VYQEFEPATRWTSEPDAEVLVADLPGFKKEQLKVSVTATRKLRLTGERPTG-GNKWIRFH 68

Query: 70  REIKLPKDIYPDEIRAKFGGNVLSITMPK-KASPPEISKPNP 111
           +EI +P  +  D + A F  N L I  PK K   P+   P P
Sbjct: 69  QEIPVPLTVDIDSVSAMFKDNKLYIRHPKLKTEIPQTKPPTP 109

[Close]

BLAST of MELO3C001943.2 vs. TAIR10
Match: AT2G27140.1 (HSP20-like chaperones superfamily protein)

HSP 1 Score: 64.3 bits (155), Expect = 8.1e-11
Identity = 35/115 (30.43%), Postives = 58/115 (50.43%), Query Frame = 0


Query: 10  LYEEFEPFCKWKKLEDSDVLEVHLPEFKKEELRVRIKNNSILTLSGEHLTAKDGKKMHFN 69
           +Y+EFEP   WK  +  + L ++LP F+KE+L+V++     L + G+   A   K + F 
Sbjct: 13  IYDEFEPLSNWKTEQGFEALTIYLPGFRKEQLKVQVTTTRKLRVMGDR-PAGANKWIRFR 72

Query: 70  REIKLPKDIYPDEIRAKFGGNVLSITMPK-------------KASPPEISKPNPD 112
           +E  +P +I  D + AKF G  L + +P+                PP + K NP+
Sbjct: 73  KEFPIPPNIDVDSVSAKFEGANLVVRLPRTEPMGKQPSPIGTATKPPPVPKENPN 126

[Close]

BLAST of MELO3C001943.2 vs. TAIR10
Match: AT5G04890.1 (HSP20-like chaperones superfamily protein)

HSP 1 Score: 64.3 bits (155), Expect = 8.1e-11
Identity = 34/99 (34.34%), Postives = 58/99 (58.59%), Query Frame = 0


Query: 2   EKGEPSGVLYEEFEPFCKWKKLEDSDVLEVHLPEFKKEELRVR-IKNNSILTLSGEHLTA 61
           +KG   GV YE+F P  +WK   ++ +L + L  F KE+++V  + ++ ++ ++GE   A
Sbjct: 7   QKGTGFGVQYEDFVPKSEWKDQPEATILNIDLTGFAKEQMKVTYVHSSKMIRVTGERPLA 66

Query: 62  KDGKKMHFNREIKLPKDIYPDEIRAKFGGNVLSITMPKK 100
            + K   FN    +P++   D+I   F  NVL+ITMPK+
Sbjct: 67  -NRKWSRFNEVFTVPQNCLVDKIHGSFKNNVLTITMPKE 104

[Close]

BLAST of MELO3C001943.2 vs. TAIR10
Match: AT1G07400.1 (HSP20-like chaperones superfamily protein)

HSP 1 Score: 62.8 bits (151), Expect = 2.4e-10
Identity = 30/89 (33.71%), Postives = 54/89 (60.67%), Query Frame = 0


Query: 20  WKKLEDSDVLEVHLPEFKKEELRVRIKNNSILTLSGEHLTAKDGKK----------MHFN 79
           WK+  ++ V +  LP  KKEE++V I+++S+L +SGE    K+ K+            F+
Sbjct: 52  WKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFS 111

Query: 80  REIKLPKDIYPDEIRAKFGGNVLSITMPK 99
           R+ KLP+++  D+++A     VL++T+PK
Sbjct: 112 RKFKLPENVKMDQVKASMENGVLTVTVPK 140

[Close]

BLAST of MELO3C001943.2 vs. Swiss-Prot
Match: sp|D9UBX6|RTM2B_ARATH (Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RTM2 PE=3 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.5e-09
Identity = 34/99 (34.34%), Postives = 58/99 (58.59%), Query Frame = 0


Query: 2   EKGEPSGVLYEEFEPFCKWKKLEDSDVLEVHLPEFKKEELRVR-IKNNSILTLSGEHLTA 61
           +KG   GV YE+F P  +WK   ++ +L + L  F KE+++V  + ++ ++ ++GE   A
Sbjct: 7   QKGTGFGVQYEDFVPKSEWKDQPEATILNIDLTGFAKEQMKVTYVHSSKMIRVTGERPLA 66

Query: 62  KDGKKMHFNREIKLPKDIYPDEIRAKFGGNVLSITMPKK 100
            + K   FN    +P++   D+I   F  NVL+ITMPK+
Sbjct: 67  -NRKWSRFNEVFTVPQNCLVDKIHGSFKNNVLTITMPKE 104

[Close]

BLAST of MELO3C001943.2 vs. Swiss-Prot
Match: sp|D9UBX4|RTM2C_ARATH (Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RTM2 PE=3 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.5e-09
Identity = 34/99 (34.34%), Postives = 58/99 (58.59%), Query Frame = 0


Query: 2   EKGEPSGVLYEEFEPFCKWKKLEDSDVLEVHLPEFKKEELRVR-IKNNSILTLSGEHLTA 61
           +KG   GV YE+F P  +WK   ++ +L + L  F KE+++V  + ++ ++ ++GE   A
Sbjct: 7   QKGTGFGVQYEDFVPKSEWKDQPEATILNIDLTGFAKEQMKVTYVHSSKMIRVTGERPLA 66

Query: 62  KDGKKMHFNREIKLPKDIYPDEIRAKFGGNVLSITMPKK 100
            + K   FN    +P++   D+I   F  NVL+ITMPK+
Sbjct: 67  -NRKWSRFNEVFTVPQNCLVDKIHGSFKNNVLTITMPKE 104

[Close]

BLAST of MELO3C001943.2 vs. Swiss-Prot
Match: sp|Q9M670|RTM2_ARATH (Protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RTM2 PE=1 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.5e-09
Identity = 34/99 (34.34%), Postives = 58/99 (58.59%), Query Frame = 0


Query: 2   EKGEPSGVLYEEFEPFCKWKKLEDSDVLEVHLPEFKKEELRVR-IKNNSILTLSGEHLTA 61
           +KG   GV YE+F P  +WK   ++ +L + L  F KE+++V  + ++ ++ ++GE   A
Sbjct: 7   QKGTGFGVQYEDFVPKSEWKDQPEATILNIDLTGFAKEQMKVTYVHSSKMIRVTGERPLA 66

Query: 62  KDGKKMHFNREIKLPKDIYPDEIRAKFGGNVLSITMPKK 100
            + K   FN    +P++   D+I   F  NVL+ITMPK+
Sbjct: 67  -NRKWSRFNEVFTVPQNCLVDKIHGSFKNNVLTITMPKE 104

[Close]

BLAST of MELO3C001943.2 vs. Swiss-Prot
Match: sp|D5K211|RTM2A_ARATH (Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RTM2 PE=3 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.9e-09
Identity = 34/99 (34.34%), Postives = 58/99 (58.59%), Query Frame = 0


Query: 2   EKGEPSGVLYEEFEPFCKWKKLEDSDVLEVHLPEFKKEELRVR-IKNNSILTLSGEHLTA 61
           +KG   GV YE+F P  +WK   ++ +L + L  F KE+++V  + ++ ++ ++GE   A
Sbjct: 7   QKGTGFGVQYEDFVPKSEWKDQPEATILNIDLTGFAKEQMKVTYVHSSKMIRVTGERPLA 66

Query: 62  KDGKKMHFNREIKLPKDIYPDEIRAKFGGNVLSITMPKK 100
            + K   FN    +P++   D+I   F  NVL+ITMPK+
Sbjct: 67  -NRKWNRFNEVFTVPQNCLVDKIHGSFKNNVLTITMPKE 104

[Close]

BLAST of MELO3C001943.2 vs. Swiss-Prot
Match: sp|D9UC01|RTM2D_ARATH (Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RTM2 PE=3 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 3.3e-09
Identity = 34/99 (34.34%), Postives = 58/99 (58.59%), Query Frame = 0


Query: 2   EKGEPSGVLYEEFEPFCKWKKLEDSDVLEVHLPEFKKEELRVR-IKNNSILTLSGEHLTA 61
           +KG   GV YE+F P  +WK   ++ +L + L  F KE+++V  + ++ ++ ++GE   A
Sbjct: 7   QKGTGFGVQYEDFVPKSEWKDQPEATILNIDLTGFAKEQMKVTYVHSSKMIRVTGERPLA 66

Query: 62  KDGKKMHFNREIKLPKDIYPDEIRAKFGGNVLSITMPKK 100
            + K   FN    +P++   D+I   F  NVL+ITMPK+
Sbjct: 67  -NRKWNRFNEVFTVPQNCLVDKIHGSFKKNVLTITMPKE 104

[Close]

BLAST of MELO3C001943.2 vs. TrEMBL
Match: tr|A0A1S3CP71|A0A1S3CP71_CUCME (16.9 kDa class I heat shock protein 1 OS=Cucumis melo OX=3656 GN=LOC103502934 PE=3 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 7.6e-88
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MEKGEPSGVLYEEFEPFCKWKKLEDSDVLEVHLPEFKKEELRVRIKNNSILTLSGEHLTA 60
           MEKGEPSGVLYEEFEPFCKWKKLEDSDVLEVHLPEFKKEELRVRIKNNSILTLSGEHLTA
Sbjct: 1   MEKGEPSGVLYEEFEPFCKWKKLEDSDVLEVHLPEFKKEELRVRIKNNSILTLSGEHLTA 60

Query: 61  KDGKKMHFNREIKLPKDIYPDEIRAKFGGNVLSITMPKKASPPEISKPNPDNASEDKLTQ 120
           KDGKKMHFNREIKLPKDIYPDEIRAKFGGNVLSITMPKKASPPEISKPNPDNASEDKLTQ
Sbjct: 61  KDGKKMHFNREIKLPKDIYPDEIRAKFGGNVLSITMPKKASPPEISKPNPDNASEDKLTQ 120

Query: 121 SNGNGKPKNFISRLKSPLSRLKFSKETATAMAVAVVILAVGVYYLIKN 169
           SNGNGKPKNFISRLKSPLSRLKFSKETATAMAVAVVILAVGVYYLIKN
Sbjct: 121 SNGNGKPKNFISRLKSPLSRLKFSKETATAMAVAVVILAVGVYYLIKN 168

[Close]

BLAST of MELO3C001943.2 vs. TrEMBL
Match: tr|A0A0A0LT66|A0A0A0LT66_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G031780 PE=3 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 1.7e-79
Identity = 151/168 (89.88%), Postives = 161/168 (95.83%), Query Frame = 0


Query: 1   MEKGEPSGVLYEEFEPFCKWKKLEDSDVLEVHLPEFKKEELRVRIKNNSILTLSGEHLTA 60
           MEKGEPS VLY +FEP+C+WKK+EDSDVLEV LPEFKKEELRVRIKNNSILT+SGE L A
Sbjct: 1   MEKGEPSDVLYVKFEPYCQWKKIEDSDVLEVQLPEFKKEELRVRIKNNSILTISGEQLAA 60

Query: 61  KDGKKMHFNREIKLPKDIYPDEIRAKFGGNVLSITMPKKASPPEISKPNPDNASEDKLTQ 120
           KDGKKMHFNR+IKLPKD++PDEIRAKFGGN+LSITMPKKASPPEISKPNPDNASEDKLTQ
Sbjct: 61  KDGKKMHFNRDIKLPKDVFPDEIRAKFGGNILSITMPKKASPPEISKPNPDNASEDKLTQ 120

Query: 121 SNGNGKPKNFISRLKSPLSRLKFSKETATAMAVAVVILAVGVYYLIKN 169
           SNGNGKPKNFIS+LKSPLSRLKFSK TATAMA AVVILAVGVYYLIKN
Sbjct: 121 SNGNGKPKNFISKLKSPLSRLKFSKATATAMATAVVILAVGVYYLIKN 168

[Close]

BLAST of MELO3C001943.2 vs. TrEMBL
Match: tr|A0A2N9GUM3|A0A2N9GUM3_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS30943 PE=3 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 4.4e-19
Identity = 48/98 (48.98%), Postives = 68/98 (69.39%), Query Frame = 0


Query: 2   EKGEPSGVLYEEFEPFCKWKKLEDSDVLEVHLPEFKKEELRVRIKNNSILTLSGEHLTAK 61
           + G P   +YE+FEP+CKW+  E+ D LE+ L +FKKE+L+V+I N  +L +SGE  T++
Sbjct: 4   KNGAPVKRIYEDFEPYCKWRVEEERDTLELQLQDFKKEQLKVQINNLGVLRISGERATSE 63

Query: 62  DGKKMHFNREIKLPKDIYPDEIRAKFGGNVLSITMPKK 100
           D K   FN+EIK+ K+     I+AKFG   L+ITMPKK
Sbjct: 64  DIKWSRFNKEIKVAKNCETSAIQAKFGNGTLTITMPKK 101

[Close]

BLAST of MELO3C001943.2 vs. TrEMBL
Match: tr|A0A1U8MQ99|A0A1U8MQ99_GOSHI (16.6 kDa heat shock protein-like OS=Gossypium hirsutum OX=3635 GN=LOC107940098 PE=3 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 4.9e-18
Identity = 45/94 (47.87%), Postives = 68/94 (72.34%), Query Frame = 0


Query: 9   VLYEEFEPFCKWKKLEDSDVLEVHLPEFKKEELRVRIKNNSILTLSGEHLTAKDGKK-MH 68
           + YEEFEPFCKWK+  +SD LE+HLPEFK+++LRV++ ++  L +SGE  +  DGKK   
Sbjct: 3   ITYEEFEPFCKWKREPNSDTLEIHLPEFKRQQLRVQLSSSGNLVISGERESDSDGKKGNR 62

Query: 69  FNREIKLPKDIYPDEIRAKFGGNVLSITMPKKAS 102
           F RE K+  +I  ++IRA+F   +L + MPK+++
Sbjct: 63  FRREFKVSNEIEANQIRAQFCSGILYVIMPKRST 96

[Close]

BLAST of MELO3C001943.2 vs. TrEMBL
Match: tr|A0A0D2VHN1|A0A0D2VHN1_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_013G194400 PE=3 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 4.9e-18
Identity = 45/94 (47.87%), Postives = 68/94 (72.34%), Query Frame = 0


Query: 9   VLYEEFEPFCKWKKLEDSDVLEVHLPEFKKEELRVRIKNNSILTLSGEHLTAKDGKK-MH 68
           + YEEFEPFCKWK+  +SD LE+HLPEFK+++LRV++ ++  L +SGE  +  DGKK   
Sbjct: 3   ITYEEFEPFCKWKREPNSDTLEIHLPEFKRQQLRVQLSSSGNLVISGERESDSDGKKGNR 62

Query: 69  FNREIKLPKDIYPDEIRAKFGGNVLSITMPKKAS 102
           F RE K+  +I  ++IRA+F   +L + MPK+++
Sbjct: 63  FRREFKVSNEIEANQIRAQFCSGILYVIMPKRST 96

The following BLAST results are available for this feature:

BLAST of MELO3C001943.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008465577.1	1.2e-87	100.00	PREDICTED: 16.9 kDa class I heat shock protein 1 [Cucumis melo]	[more]
XP_004137386.1	2.6e-79	89.88	PREDICTED: 18.1 kDa class I heat shock protein [Cucumis sativus] >KGN63957.1 hyp...	[more]
XP_023001660.1	1.8e-64	78.24	17.8 kDa class I heat shock protein-like [Cucurbita maxima]	[more]
XP_023520341.1	2.6e-63	79.41	17.8 kDa class I heat shock protein-like [Cucurbita pepo subsp. pepo]	[more]
XP_022923784.1	4.4e-63	79.41	17.8 kDa class I heat shock protein-like [Cucurbita moschata]	[more]

BLAST of MELO3C001943.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G54400.1	1.2e-17	34.71	HSP20-like chaperones superfamily protein	[more]
AT5G20970.1	2.1e-11	38.24	HSP20-like chaperones superfamily protein	[more]
AT2G27140.1	8.1e-11	30.43	HSP20-like chaperones superfamily protein	[more]
AT5G04890.1	8.1e-11	34.34	HSP20-like chaperones superfamily protein	[more]
AT1G07400.1	2.4e-10	33.71	HSP20-like chaperones superfamily protein	[more]

BLAST of MELO3C001943.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|D9UBX6\|RTM2B_ARATH	1.5e-09	34.34	Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RT...	[more]
sp\|D9UBX4\|RTM2C_ARATH	1.5e-09	34.34	Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RT...	[more]
sp\|Q9M670\|RTM2_ARATH	1.5e-09	34.34	Protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RTM2 PE=1 S...	[more]
sp\|D5K211\|RTM2A_ARATH	1.9e-09	34.34	Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RT...	[more]
sp\|D9UC01\|RTM2D_ARATH	3.3e-09	34.34	Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RT...	[more]

BLAST of MELO3C001943.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CP71\|A0A1S3CP71_CUCME	7.6e-88	100.00	16.9 kDa class I heat shock protein 1 OS=Cucumis melo OX=3656 GN=LOC103502934 PE...	[more]
tr\|A0A0A0LT66\|A0A0A0LT66_CUCSA	1.7e-79	89.88	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G031780 PE=3 SV=1	[more]
tr\|A0A2N9GUM3\|A0A2N9GUM3_FAGSY	4.4e-19	48.98	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS30943 PE=3 SV=1	[more]
tr\|A0A1U8MQ99\|A0A1U8MQ99_GOSHI	4.9e-18	47.87	16.6 kDa heat shock protein-like OS=Gossypium hirsutum OX=3635 GN=LOC107940098 P...	[more]
tr\|A0A0D2VHN1\|A0A0D2VHN1_GOSRA	4.9e-18	47.87	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_013G194400 PE=3 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002068	A-crystallin/Hsp20_dom
IPR008978	HSP20-like_chaperone

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:1901564	organonitrogen compound metabolic process
biological_process	GO:0043436	oxoacid metabolic process
biological_process	GO:0006790	sulfur compound metabolic process
biological_process	GO:0044712	single-organism catabolic process
biological_process	GO:0044723	single-organism carbohydrate metabolic process
biological_process	GO:0044711	single-organism biosynthetic process
biological_process	GO:0006090	pyruvate metabolic process
biological_process	GO:0006796	phosphate-containing compound metabolic process
biological_process	GO:0019637	organophosphate metabolic process
biological_process	GO:1901575	organic substance catabolic process
biological_process	GO:1901576	organic substance biosynthetic process
biological_process	GO:1901657	glycosyl compound metabolic process
biological_process	GO:0044248	cellular catabolic process
biological_process	GO:0044249	cellular biosynthetic process
biological_process	GO:0044238	primary metabolic process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0044444	cytoplasmic part
cellular_component	GO:0043231	intracellular membrane-bounded organelle
cellular_component	GO:0016020	membrane
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0016787	hydrolase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C001943.2.1	MELO3C001943.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008978	HSP20-like chaperone	GENE3D	G3DSA:2.60.40.790		coord: 3..107 e-value: 9.9E-19 score: 69.5
IPR008978	HSP20-like chaperone	SUPERFAMILY	SSF49764	HSP20-like chaperones	coord: 10..101
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 21..104 e-value: 1.2E-11 score: 44.5
IPR002068	Alpha crystallin/Hsp20 domain	PROSITE	PS01031	SHSP	coord: 8..114 score: 18.013
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 94..131
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 112..129
None	No IPR available	PANTHER	PTHR43670:SF16	ALPHA-CRYSTALLIN DOMAIN OF HEAT SHOCK PROTEIN-CONTAINING PROTEIN	coord: 9..104
None	No IPR available	PANTHER	PTHR43670	FAMILY NOT NAMED	coord: 9..104
None	No IPR available	CDD	cd06464	ACD_sHsps-like	coord: 24..98 e-value: 5.26126E-17 score: 71.4312

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C001943.2	Csa1G031780	Cucumber (Chinese Long) v2	cumedB022
MELO3C001943.2	CSPI01G05160	Wild cucumber (PI 183967)	cpimedB023
MELO3C001943.2	Cucsa.112350	Cucumber (Gy14) v1	cgymedB156
MELO3C001943.2	CmaCh13G011000	Cucurbita maxima (Rimu)	cmamedB219
MELO3C001943.2	CmaCh01G007570	Cucurbita maxima (Rimu)	cmamedB452
MELO3C001943.2	CmoCh13G011490	Cucurbita moschata (Rifu)	cmomedB207
MELO3C001943.2	CmoCh01G007920	Cucurbita moschata (Rifu)	cmomedB440
MELO3C001943.2	Lsi02G000290	Bottle gourd (USVL1VR-Ls)	lsimedB189
MELO3C001943.2	Cp4.1LG02g09900	Cucurbita pepo (Zucchini)	cpemedB582
MELO3C001943.2	Cp4.1LG20g00570	Cucurbita pepo (Zucchini)	cpemedB553
MELO3C001943.2	Cla018648	Watermelon (97103) v1	medwmB170
MELO3C001943.2	ClCG04G012640	Watermelon (Charleston Gray)	medwcgB146
MELO3C001943.2	Cla97C04G079640	Watermelon (97103) v2	medwmbB147
MELO3C001943.2	Bhi08G001610	Wax gourd	medwgoB178
MELO3C001943.2	Carg04737	Silver-seed gourd	carmedB0396
MELO3C001943.2	Carg06982	Silver-seed gourd	carmedB0529
MELO3C001943.2	CsaV3_1G005060	Cucumber (Chinese Long) v3	cucmedB022

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C001943.2	Cucumber (Gy14) v2	cgybmedB020