CSPI01G05160 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI01G05160
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	17.8 kDa class I heat shock protein
Location	Chr1 : 3375656 .. 3376972 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAGGAATGAAGGTAAGTAAAGAATATTTATAATTCTAAAGCTTAAAAAAGGCATATTAGCATTAGCACTGTTAGATTCCCTCCAAGTTAGGATTATGATTTATAGGCATAGAGAGCAAGAAACAGTGCACGCTGAGAATTGCCCTACACATAAAGAAACCACATAACTTCTGTTGTGACACTTGCAAAAGAATATTTCTTCTCATTAAGAAAACCATCTCCGCGTATTTCCTCTATTATAAGAAAGGGGTCACAACATGGAACTGCATTCAATCAGATTAGCCACGAAGTAATCTAACAAAAACAATGGAGAAAGGTGAACCATCAGATGTGTTGTACGTGAAATTCGAGCCTTACTGCCAATGGAAAAAAATCGAAGACTCTGATGTTCTTGAGGTTCAACTCCCAGGTATAATTTATCAACTTACAGTTTTCTCGGCATTCTCATTATATTCCAAGTGATTTGATATTCAAAACTGCACTTGTGAACAGAATTTAAGAAAGAAGAATTGAGGGTTCGGATAAAAAACAACTCTATCCTTACGATTTCCGGTGAGCAACTGGCAGCCAAAGATGGGAAGAAGATGCATTTCAACAGAGACATCAAACTTCCAAAGGATGTATTCCCAGACGAAATTCGTGCTAAATTCGGTGGCAATATTCTTTCAATCACAATGCCTAAGAAAGCTAGCCCGCCAGAAACTAGCAAACCAAACCCGGACAATGCCTCTGAGGATAAACTAACACAATCCAATGGTAATGGTAAGCCGAAGAACTTCATATCCAAGTTAAAAAGTCCATTGTCGAGGTTGAAATTTAGCAAGGCAACCGCAACCGCTATGGCGACGGCCGTGGTGATTCTGGCCGTTGGAGTTTACTACTTGATTAAAAACTAAATGAAGTGTATATACACACACACATATTTTAGAATCAAATCCTTACAAATTTCAAATTGAATTCATGAATAAACAATTCATTTGCTAAGATCCTAATTAATCCCCCTTGATTTCTGCAATTTCTATGAACCTCGGAATAGCCATCAATCCCCATAGGTGAGAAACTGACAGTTCAACGGTGGGGGATTCCCAGATTATCCACTTTGATTTTATATTTGATGGTTTGTGTTTGTGTTTATAGGCAGAGGACAAGGAATTAATACTTGCATTATATTTAGTGTGAAGATTGATATGACATCTTAACCGTGCGTCGGTATCACCAATTTTAATTTGTATCCAATTCTAGACACGTTACTCTGCATCAATGTATGTTCTTAATTAAGTAGTCCCACAATCTGTGTCTTTTGTGCCAATGACCAAT

mRNA sequence

ATGGAGAAAGGTGAACCATCAGATGTGTTGTACGTGAAATTCGAGCCTTACTGCCAATGGAAAAAAATCGAAGACTCTGATGTTCTTGAGGTTCAACTCCCAGAATTTAAGAAAGAAGAATTGAGGGTTCGGATAAAAAACAACTCTATCCTTACGATTTCCGGTGAGCAACTGGCAGCCAAAGATGGGAAGAAGATGCATTTCAACAGAGACATCAAACTTCCAAAGGATGTATTCCCAGACGAAATTCGTGCTAAATTCGGTGGCAATATTCTTTCAATCACAATGCCTAAGAAAGCTAGCCCGCCAGAAACTAGCAAACCAAACCCGGACAATGCCTCTGAGGATAAACTAACACAATCCAATGGTAATGGTAAGCCGAAGAACTTCATATCCAAGTTAAAAAGTCCATTGTCGAGGTTGAAATTTAGCAAGGCAACCGCAACCGCTATGGCGACGGCCGTGGTGATTCTGGCCGTTGGAGTTTACTACTTGATTAAAAACTAA

Coding sequence (CDS)

ATGGAGAAAGGTGAACCATCAGATGTGTTGTACGTGAAATTCGAGCCTTACTGCCAATGGAAAAAAATCGAAGACTCTGATGTTCTTGAGGTTCAACTCCCAGAATTTAAGAAAGAAGAATTGAGGGTTCGGATAAAAAACAACTCTATCCTTACGATTTCCGGTGAGCAACTGGCAGCCAAAGATGGGAAGAAGATGCATTTCAACAGAGACATCAAACTTCCAAAGGATGTATTCCCAGACGAAATTCGTGCTAAATTCGGTGGCAATATTCTTTCAATCACAATGCCTAAGAAAGCTAGCCCGCCAGAAACTAGCAAACCAAACCCGGACAATGCCTCTGAGGATAAACTAACACAATCCAATGGTAATGGTAAGCCGAAGAACTTCATATCCAAGTTAAAAAGTCCATTGTCGAGGTTGAAATTTAGCAAGGCAACCGCAACCGCTATGGCGACGGCCGTGGTGATTCTGGCCGTTGGAGTTTACTACTTGATTAAAAACTAA

Homology

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BLAST of CSPI01G05160 vs. Swiss-Prot
Match: HS178_ARATH (17.8 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP17.8 PE=1 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 4.2e-09
Identity = 31/89 (34.83%), Postives = 54/89 (60.67%), Query Frame = 1


Query: 20  WKKIEDSDVLEVQLPEFKKEELRVRIKNNSILTISGEQLAAKDGKK----------MHFN 79
           WK+  ++ V +  LP  KKEE++V I+++S+L ISGE+   K+ K+            F+
Sbjct: 52  WKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFS 111

Query: 80  RDIKLPKDVFPDEIRAKFGGNILSITMPK 99
           R  KLP++V  D+++A     +L++T+PK
Sbjct: 112 RKFKLPENVKMDQVKASMENGVLTVTVPK 140

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BLAST of CSPI01G05160 vs. Swiss-Prot
Match: HS17A_ARATH (17.6 kDa class I heat shock protein 1 OS=Arabidopsis thaliana GN=HSP17.6A PE=1 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.2e-08
Identity = 31/89 (34.83%), Postives = 55/89 (61.80%), Query Frame = 1


Query: 20  WKKIEDSDVLEVQLPEFKKEELRVRIKNNSILTISGEQLAAKDGKK--MH--------FN 79
           WK+  ++ V +  LP  KKEE++V I+++S+L ISGE+   K+ K+   H        F+
Sbjct: 50  WKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGGFS 109

Query: 80  RDIKLPKDVFPDEIRAKFGGNILSITMPK 99
           R  +LP++V  D+++A     +L++T+PK
Sbjct: 110 RKFRLPENVKMDQVKASMENGVLTVTVPK 138

[Close]

BLAST of CSPI01G05160 vs. Swiss-Prot
Match: RTM2C_ARATH (Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana GN=RTM2 PE=3 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.6e-08
Identity = 36/112 (32.14%), Postives = 62/112 (55.36%), Query Frame = 1


Query: 2   EKGEPSDVLYVKFEPYCQWKKIEDSDVLEVQLPEFKKEELRVR-IKNNSILTISGEQLAA 61
           +KG    V Y  F P  +WK   ++ +L + L  F KE+++V  + ++ ++ ++GE+  A
Sbjct: 7   QKGTGFGVQYEDFVPKSEWKDQPEATILNIDLTGFAKEQMKVTYVHSSKMIRVTGERPLA 66

Query: 62  KDGKKMHFNRDIKLPKDVFPDEIRAKFGGNILSITMPKK-----ASPPETSK 108
            + K   FN    +P++   D+I   F  N+L+ITMPK+     A  PETS+
Sbjct: 67  -NRKWSRFNEVFTVPQNCLVDKIHGSFKNNVLTITMPKETITKVAYLPETSR 117

[Close]

BLAST of CSPI01G05160 vs. Swiss-Prot
Match: RTM2B_ARATH (Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana GN=RTM2 PE=3 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.6e-08
Identity = 36/112 (32.14%), Postives = 62/112 (55.36%), Query Frame = 1


Query: 2   EKGEPSDVLYVKFEPYCQWKKIEDSDVLEVQLPEFKKEELRVR-IKNNSILTISGEQLAA 61
           +KG    V Y  F P  +WK   ++ +L + L  F KE+++V  + ++ ++ ++GE+  A
Sbjct: 7   QKGTGFGVQYEDFVPKSEWKDQPEATILNIDLTGFAKEQMKVTYVHSSKMIRVTGERPLA 66

Query: 62  KDGKKMHFNRDIKLPKDVFPDEIRAKFGGNILSITMPKK-----ASPPETSK 108
            + K   FN    +P++   D+I   F  N+L+ITMPK+     A  PETS+
Sbjct: 67  -NRKWSRFNEVFTVPQNCLVDKIHGSFKNNVLTITMPKETITKVAYLPETSR 117

[Close]

BLAST of CSPI01G05160 vs. Swiss-Prot
Match: RTM2_ARATH (Protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana GN=RTM2 PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.6e-08
Identity = 36/112 (32.14%), Postives = 62/112 (55.36%), Query Frame = 1


Query: 2   EKGEPSDVLYVKFEPYCQWKKIEDSDVLEVQLPEFKKEELRVR-IKNNSILTISGEQLAA 61
           +KG    V Y  F P  +WK   ++ +L + L  F KE+++V  + ++ ++ ++GE+  A
Sbjct: 7   QKGTGFGVQYEDFVPKSEWKDQPEATILNIDLTGFAKEQMKVTYVHSSKMIRVTGERPLA 66

Query: 62  KDGKKMHFNRDIKLPKDVFPDEIRAKFGGNILSITMPKK-----ASPPETSK 108
            + K   FN    +P++   D+I   F  N+L+ITMPK+     A  PETS+
Sbjct: 67  -NRKWSRFNEVFTVPQNCLVDKIHGSFKNNVLTITMPKETITKVAYLPETSR 117

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BLAST of CSPI01G05160 vs. TrEMBL
Match: A0A0A0LT66_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G031780 PE=3 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 2.3e-86
Identity = 167/168 (99.40%), Postives = 167/168 (99.40%), Query Frame = 1


Query: 1   MEKGEPSDVLYVKFEPYCQWKKIEDSDVLEVQLPEFKKEELRVRIKNNSILTISGEQLAA 60
           MEKGEPSDVLYVKFEPYCQWKKIEDSDVLEVQLPEFKKEELRVRIKNNSILTISGEQLAA
Sbjct: 1   MEKGEPSDVLYVKFEPYCQWKKIEDSDVLEVQLPEFKKEELRVRIKNNSILTISGEQLAA 60

Query: 61  KDGKKMHFNRDIKLPKDVFPDEIRAKFGGNILSITMPKKASPPETSKPNPDNASEDKLTQ 120
           KDGKKMHFNRDIKLPKDVFPDEIRAKFGGNILSITMPKKASPPE SKPNPDNASEDKLTQ
Sbjct: 61  KDGKKMHFNRDIKLPKDVFPDEIRAKFGGNILSITMPKKASPPEISKPNPDNASEDKLTQ 120

Query: 121 SNGNGKPKNFISKLKSPLSRLKFSKATATAMATAVVILAVGVYYLIKN 169
           SNGNGKPKNFISKLKSPLSRLKFSKATATAMATAVVILAVGVYYLIKN
Sbjct: 121 SNGNGKPKNFISKLKSPLSRLKFSKATATAMATAVVILAVGVYYLIKN 168

[Close]

BLAST of CSPI01G05160 vs. TrEMBL
Match: A0A0K9R2N1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_113140 PE=3 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.5e-16
Identity = 65/191 (34.03%), Postives = 96/191 (50.26%), Query Frame = 1


Query: 11  YVKFEPYCQWKKIEDSDVLEVQLPEFKKEELRVRIKNNSILTISGEQLAAKDG-KKMHFN 70
           YV FEPYC+WKK E  + L   LP+FKK++LRV++ N  +L +SGE+    DG K+  F 
Sbjct: 15  YVDFEPYCEWKKEEGVETLVFHLPDFKKDQLRVQVNNLGVLKVSGERPTTADGTKRNRFL 74

Query: 71  RDIKLPKDVFPDEIRAKFGGNILSITMPKKASP--------PETSK---PNPDNASEDK- 130
           ++ K+P+    ++IRAKF G  L + MPKKASP        PET+    P P+   + K 
Sbjct: 75  KETKIPQGCDINDIRAKFSGGHLHVAMPKKASPLIEKQQMKPETTSSGGPKPEATQKPKA 134

Query: 131 ------------LTQSNGNGKPKNFISKLK--------SPLSRLKFSKATATAMATAV-V 168
                       L+  NG         ++K        + L RL+  K    ++  AV  
Sbjct: 135 EVLVPNAEKLKALSSENGKAGTSTSYDQMKDENIFGLGNALGRLQVQKKVNVSLGVAVAA 194

[Close]

BLAST of CSPI01G05160 vs. TrEMBL
Match: W9QEJ7_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_014720 PE=3 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.5e-16
Identity = 45/87 (51.72%), Postives = 63/87 (72.41%), Query Frame = 1


Query: 13  KFEPYCQWKKIEDSDVLEVQLPEFKKEELRVRIKNNSILTISGEQLAAKDGKKMHFNRDI 72
           +FEP+CQW++ ++ D+LEV L  FK+E LRV++ N  ILTISGEQ + +D K   F ++I
Sbjct: 4   EFEPFCQWRRGQERDILEVHLKGFKREHLRVQMNNGHILTISGEQ-SVEDYKIRRFRKEI 63

Query: 73  KLPKDVFPDEIRAKFGGNILSITMPKK 100
           K+ KD  PD+IRAKF   IL IT+P +
Sbjct: 64  KVSKDCTPDQIRAKFASGILYITLPMR 89

[Close]

BLAST of CSPI01G05160 vs. TrEMBL
Match: A0A0D2VHN1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G194400 PE=3 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 2.1e-15
Identity = 40/95 (42.11%), Postives = 68/95 (71.58%), Query Frame = 1


Query: 8   DVLYVKFEPYCQWKKIEDSDVLEVQLPEFKKEELRVRIKNNSILTISGEQLAAKDGKK-M 67
           ++ Y +FEP+C+WK+  +SD LE+ LPEFK+++LRV++ ++  L ISGE+ +  DGKK  
Sbjct: 2   EITYEEFEPFCKWKREPNSDTLEIHLPEFKRQQLRVQLSSSGNLVISGERESDSDGKKGN 61

Query: 68  HFNRDIKLPKDVFPDEIRAKFGGNILSITMPKKAS 102
            F R+ K+  ++  ++IRA+F   IL + MPK+++
Sbjct: 62  RFRREFKVSNEIEANQIRAQFCSGILYVIMPKRST 96

[Close]

BLAST of CSPI01G05160 vs. TrEMBL
Match: A0A0J8CCI8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g109980 PE=3 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 4.7e-15
Identity = 61/189 (32.28%), Postives = 97/189 (51.32%), Query Frame = 1


Query: 11  YVKFEPYCQWKKIEDSDVLEVQLPEFKKEELRVRIKNNSILTISGEQLAAKDG-KKMHFN 70
           YV FEPYC+WKK +  + L   LP+FK+++LRV++ N  ++ +SGE+    DG ++  F 
Sbjct: 15  YVDFEPYCEWKKDDGVETLVFHLPDFKRDQLRVQVNNLGVIKVSGERQTTADGTQRSRFL 74

Query: 71  RDIKLPKDVFPDEIRAKFGGNILSITMPKKASPP--ETSKPNPD----NASEDKLTQ--- 130
           ++ K+P+    ++IRAKF G  L + MP KA+PP  +  KP P+    +A E ++TQ   
Sbjct: 75  KETKIPQGCEINDIRAKFSGGHLHVVMPIKAAPPVQQQQKPKPEITSSSAPESEITQKPK 134

Query: 131 --------------SNGNGKP-------KNFISKLKSPLSRLKFSKATATAMATAV-VIL 168
                         S+ NGK         N          RL+  K  A ++  AV  ++
Sbjct: 135 AEALAPNGDNLKASSSENGKAGGTSTIYDNIFGNGSYSQGRLQVQKKVAVSLGVAVAAMV 194

[Close]

BLAST of CSPI01G05160 vs. TAIR10
Match: AT1G54400.1 (AT1G54400.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 77.8 bits (190), Expect = 7.2e-15
Identity = 56/170 (32.94%), Postives = 85/170 (50.00%), Query Frame = 1


Query: 11  YVKFEPYCQWKKIEDSDVLEVQLPE-FKKEELRVRIKNNSILTISGEQLAAKDGKKMHFN 70
           Y + EP+C+W++ ED D+LE+ LP   KKE L+++I N+ +LTI+G        K + F 
Sbjct: 13  YDEIEPFCRWRRTEDIDILELHLPSGLKKEHLKIQINNSGVLTITG-GCPVDQTKTIRFM 72

Query: 71  RDIKLPKDVFPDEIRAKFGGNILSITMPK------------KASPPETSKPNPDNASEDK 130
           ++ K+ KD   +EIRAKF   +L +TMPK            K + P+   P  D    + 
Sbjct: 73  KETKVAKDCKRNEIRAKFSKGVLYVTMPKTIPIAAGLSVSLKGATPQHQTPKTDEGMRNV 132

Query: 131 LTQSNGNGKPKNFISKLKSPLSRLKFSKATATAMATAVVILAVGVYYLIK 168
              S+       F SK  S   RL   + T      AVV++A  V  ++K
Sbjct: 133 ANCSS------EFYSKFGSLKQRL--WRKTVVEGVAAVVVVAAAVLGVVK 173

[Close]

BLAST of CSPI01G05160 vs. TAIR10
Match: AT1G07400.1 (AT1G07400.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 62.8 bits (151), Expect = 2.4e-10
Identity = 31/89 (34.83%), Postives = 54/89 (60.67%), Query Frame = 1


Query: 20  WKKIEDSDVLEVQLPEFKKEELRVRIKNNSILTISGEQLAAKDGKK----------MHFN 79
           WK+  ++ V +  LP  KKEE++V I+++S+L ISGE+   K+ K+            F+
Sbjct: 52  WKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFS 111

Query: 80  RDIKLPKDVFPDEIRAKFGGNILSITMPK 99
           R  KLP++V  D+++A     +L++T+PK
Sbjct: 112 RKFKLPENVKMDQVKASMENGVLTVTVPK 140

[Close]

BLAST of CSPI01G05160 vs. TAIR10
Match: AT1G59860.1 (AT1G59860.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 61.2 bits (147), Expect = 6.9e-10
Identity = 31/89 (34.83%), Postives = 55/89 (61.80%), Query Frame = 1


Query: 20  WKKIEDSDVLEVQLPEFKKEELRVRIKNNSILTISGEQLAAKDGKK--MH--------FN 79
           WK+  ++ V +  LP  KKEE++V I+++S+L ISGE+   K+ K+   H        F+
Sbjct: 50  WKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGGFS 109

Query: 80  RDIKLPKDVFPDEIRAKFGGNILSITMPK 99
           R  +LP++V  D+++A     +L++T+PK
Sbjct: 110 RKFRLPENVKMDQVKASMENGVLTVTVPK 138

[Close]

BLAST of CSPI01G05160 vs. TAIR10
Match: AT5G04890.1 (AT5G04890.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 60.8 bits (146), Expect = 9.0e-10
Identity = 36/112 (32.14%), Postives = 62/112 (55.36%), Query Frame = 1


Query: 2   EKGEPSDVLYVKFEPYCQWKKIEDSDVLEVQLPEFKKEELRVR-IKNNSILTISGEQLAA 61
           +KG    V Y  F P  +WK   ++ +L + L  F KE+++V  + ++ ++ ++GE+  A
Sbjct: 7   QKGTGFGVQYEDFVPKSEWKDQPEATILNIDLTGFAKEQMKVTYVHSSKMIRVTGERPLA 66

Query: 62  KDGKKMHFNRDIKLPKDVFPDEIRAKFGGNILSITMPKK-----ASPPETSK 108
            + K   FN    +P++   D+I   F  N+L+ITMPK+     A  PETS+
Sbjct: 67  -NRKWSRFNEVFTVPQNCLVDKIHGSFKNNVLTITMPKETITKVAYLPETSR 117

[Close]

BLAST of CSPI01G05160 vs. TAIR10
Match: AT5G20970.1 (AT5G20970.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 59.7 bits (143), Expect = 2.0e-09
Identity = 43/126 (34.13%), Postives = 64/126 (50.79%), Query Frame = 1


Query: 10  LYVKFEPYCQWKKIEDSDVLEVQLPEFKKEELRVRIKNNSILTISGEQLAAKDGKKMHFN 69
           +Y +FEP  +W    D++VL   LP FKKE+L+V +     L ++GE+      K + F+
Sbjct: 9   VYQEFEPATRWTSEPDAEVLVADLPGFKKEQLKVSVTATRKLRLTGER-PTGGNKWIRFH 68

Query: 70  RDIKLPKDVFPDEIRAKFGGNILSITMPK-KASPPETSKPNP-DNASEDKLTQSNGNGKP 129
           ++I +P  V  D + A F  N L I  PK K   P+T  P P      D+  +  G G P
Sbjct: 69  QEIPVPLTVDIDSVSAMFKDNKLYIRHPKLKTEIPQTKPPTPVIMKPHDQHERKQGQG-P 128

Query: 130 KNFISK 134
           K  + K
Sbjct: 129 KAMVEK 132

[Close]

BLAST of CSPI01G05160 vs. NCBI nr
Match: gi|449439223|ref|XP_004137386.1| (PREDICTED: 18.1 kDa class I heat shock protein [Cucumis sativus])

HSP 1 Score: 326.2 bits (835), Expect = 3.3e-86
Identity = 167/168 (99.40%), Postives = 167/168 (99.40%), Query Frame = 1


Query: 1   MEKGEPSDVLYVKFEPYCQWKKIEDSDVLEVQLPEFKKEELRVRIKNNSILTISGEQLAA 60
           MEKGEPSDVLYVKFEPYCQWKKIEDSDVLEVQLPEFKKEELRVRIKNNSILTISGEQLAA
Sbjct: 1   MEKGEPSDVLYVKFEPYCQWKKIEDSDVLEVQLPEFKKEELRVRIKNNSILTISGEQLAA 60

Query: 61  KDGKKMHFNRDIKLPKDVFPDEIRAKFGGNILSITMPKKASPPETSKPNPDNASEDKLTQ 120
           KDGKKMHFNRDIKLPKDVFPDEIRAKFGGNILSITMPKKASPPE SKPNPDNASEDKLTQ
Sbjct: 61  KDGKKMHFNRDIKLPKDVFPDEIRAKFGGNILSITMPKKASPPEISKPNPDNASEDKLTQ 120

Query: 121 SNGNGKPKNFISKLKSPLSRLKFSKATATAMATAVVILAVGVYYLIKN 169
           SNGNGKPKNFISKLKSPLSRLKFSKATATAMATAVVILAVGVYYLIKN
Sbjct: 121 SNGNGKPKNFISKLKSPLSRLKFSKATATAMATAVVILAVGVYYLIKN 168

[Close]

BLAST of CSPI01G05160 vs. NCBI nr
Match: gi|659066279|ref|XP_008465577.1| (PREDICTED: 16.9 kDa class I heat shock protein 1 [Cucumis melo])

HSP 1 Score: 301.2 bits (770), Expect = 1.1e-78
Identity = 150/168 (89.29%), Postives = 160/168 (95.24%), Query Frame = 1


Query: 1   MEKGEPSDVLYVKFEPYCQWKKIEDSDVLEVQLPEFKKEELRVRIKNNSILTISGEQLAA 60
           MEKGEPS VLY +FEP+C+WKK+EDSDVLEV LPEFKKEELRVRIKNNSILT+SGE L A
Sbjct: 1   MEKGEPSGVLYEEFEPFCKWKKLEDSDVLEVHLPEFKKEELRVRIKNNSILTLSGEHLTA 60

Query: 61  KDGKKMHFNRDIKLPKDVFPDEIRAKFGGNILSITMPKKASPPETSKPNPDNASEDKLTQ 120
           KDGKKMHFNR+IKLPKD++PDEIRAKFGGN+LSITMPKKASPPE SKPNPDNASEDKLTQ
Sbjct: 61  KDGKKMHFNREIKLPKDIYPDEIRAKFGGNVLSITMPKKASPPEISKPNPDNASEDKLTQ 120

Query: 121 SNGNGKPKNFISKLKSPLSRLKFSKATATAMATAVVILAVGVYYLIKN 169
           SNGNGKPKNFIS+LKSPLSRLKFSK TATAMA AVVILAVGVYYLIKN
Sbjct: 121 SNGNGKPKNFISRLKSPLSRLKFSKETATAMAVAVVILAVGVYYLIKN 168

[Close]

BLAST of CSPI01G05160 vs. NCBI nr
Match: gi|703067633|ref|XP_010088020.1| (hypothetical protein L484_014720 [Morus notabilis])

HSP 1 Score: 94.4 bits (233), Expect = 2.1e-16
Identity = 45/87 (51.72%), Postives = 63/87 (72.41%), Query Frame = 1


Query: 13  KFEPYCQWKKIEDSDVLEVQLPEFKKEELRVRIKNNSILTISGEQLAAKDGKKMHFNRDI 72
           +FEP+CQW++ ++ D+LEV L  FK+E LRV++ N  ILTISGEQ + +D K   F ++I
Sbjct: 4   EFEPFCQWRRGQERDILEVHLKGFKREHLRVQMNNGHILTISGEQ-SVEDYKIRRFRKEI 63

Query: 73  KLPKDVFPDEIRAKFGGNILSITMPKK 100
           K+ KD  PD+IRAKF   IL IT+P +
Sbjct: 64  KVSKDCTPDQIRAKFASGILYITLPMR 89

[Close]

BLAST of CSPI01G05160 vs. NCBI nr
Match: gi|902198693|gb|KNA13765.1| (hypothetical protein SOVF_113140 [Spinacia oleracea])

HSP 1 Score: 94.4 bits (233), Expect = 2.1e-16
Identity = 65/191 (34.03%), Postives = 96/191 (50.26%), Query Frame = 1


Query: 11  YVKFEPYCQWKKIEDSDVLEVQLPEFKKEELRVRIKNNSILTISGEQLAAKDG-KKMHFN 70
           YV FEPYC+WKK E  + L   LP+FKK++LRV++ N  +L +SGE+    DG K+  F 
Sbjct: 15  YVDFEPYCEWKKEEGVETLVFHLPDFKKDQLRVQVNNLGVLKVSGERPTTADGTKRNRFL 74

Query: 71  RDIKLPKDVFPDEIRAKFGGNILSITMPKKASP--------PETSK---PNPDNASEDK- 130
           ++ K+P+    ++IRAKF G  L + MPKKASP        PET+    P P+   + K 
Sbjct: 75  KETKIPQGCDINDIRAKFSGGHLHVAMPKKASPLIEKQQMKPETTSSGGPKPEATQKPKA 134

Query: 131 ------------LTQSNGNGKPKNFISKLK--------SPLSRLKFSKATATAMATAV-V 168
                       L+  NG         ++K        + L RL+  K    ++  AV  
Sbjct: 135 EVLVPNAEKLKALSSENGKAGTSTSYDQMKDENIFGLGNALGRLQVQKKVNVSLGVAVAA 194

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BLAST of CSPI01G05160 vs. NCBI nr
Match: gi|694380746|ref|XP_009366482.1| (PREDICTED: uncharacterized protein LOC103956239 [Pyrus x bretschneideri])

HSP 1 Score: 91.3 bits (225), Expect = 1.8e-15
Identity = 60/156 (38.46%), Postives = 92/156 (58.97%), Query Frame = 1


Query: 11  YVKFEPYCQWKKIEDSDVLEVQLPEFKKEELRVRIKNNSILTISGEQLAAKD---GKKMH 70
           Y  FEP+CQW K E  ++LEV LP FK++++RV+I N  IL ISG+Q   ++        
Sbjct: 13  YEDFEPFCQWNKEEGFNILEVHLPGFKRQDIRVQINNLGILNISGKQPRVEETTSALPSR 72

Query: 71  FNRDIKLPKDVFPDEIRAKFGGNILSITMPKKASPPETSKPNPDNASEDKLTQSNGNGKP 130
           F R+IK+ K+   + IRAKF G ILSIT+PKKA   + S  +  +   D    S+ N   
Sbjct: 73  FCREIKISKNCTTNGIRAKFSGGILSITIPKKA---QHSNASAGSHGADNAAWSSVN--- 132

Query: 131 KNFISKLKSPLSRLKFSKATATAMATAVVILAVGVY 164
            +++  L+S + R + SK TA  +   ++++A+G Y
Sbjct: 133 -DYLVCLRSRVLRPRLSKKTAVVV---ILVMALGGY 158

The following BLAST results are available for this feature:

BLAST of CSPI01G05160 vs. Swiss-Prot


Match Name	E-value	Identity	Description
HS178_ARATH	4.2e-09	34.83	17.8 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP17.8 PE=1 SV=1	[more]
HS17A_ARATH	1.2e-08	34.83	17.6 kDa class I heat shock protein 1 OS=Arabidopsis thaliana GN=HSP17.6A PE=1 S...	[more]
RTM2C_ARATH	1.6e-08	32.14	Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana GN=RTM2 PE=3 ...	[more]
RTM2B_ARATH	1.6e-08	32.14	Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana GN=RTM2 PE=3 ...	[more]
RTM2_ARATH	1.6e-08	32.14	Protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana GN=RTM2 PE=2 SV=1	[more]

BLAST of CSPI01G05160 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LT66_CUCSA	2.3e-86	99.40	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G031780 PE=3 SV=1	[more]
A0A0K9R2N1_SPIOL	1.5e-16	34.03	Uncharacterized protein OS=Spinacia oleracea GN=SOVF_113140 PE=3 SV=1	[more]
W9QEJ7_9ROSA	1.5e-16	51.72	Uncharacterized protein OS=Morus notabilis GN=L484_014720 PE=3 SV=1	[more]
A0A0D2VHN1_GOSRA	2.1e-15	42.11	Uncharacterized protein OS=Gossypium raimondii GN=B456_013G194400 PE=3 SV=1	[more]
A0A0J8CCI8_BETVU	4.7e-15	32.28	Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g109980 PE=3 S...	[more]

BLAST of CSPI01G05160 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G54400.1	7.2e-15	32.94	HSP20-like chaperones superfamily protein	[more]
AT1G07400.1	2.4e-10	34.83	HSP20-like chaperones superfamily protein	[more]
AT1G59860.1	6.9e-10	34.83	HSP20-like chaperones superfamily protein	[more]
AT5G04890.1	9.0e-10	32.14	HSP20-like chaperones superfamily protein	[more]
AT5G20970.1	2.0e-09	34.13	HSP20-like chaperones superfamily protein	[more]

BLAST of CSPI01G05160 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449439223\|ref\|XP_004137386.1\|	3.3e-86	99.40	PREDICTED: 18.1 kDa class I heat shock protein [Cucumis sativus]	[more]
gi\|659066279\|ref\|XP_008465577.1\|	1.1e-78	89.29	PREDICTED: 16.9 kDa class I heat shock protein 1 [Cucumis melo]	[more]
gi\|703067633\|ref\|XP_010088020.1\|	2.1e-16	51.72	hypothetical protein L484_014720 [Morus notabilis]	[more]
gi\|902198693\|gb\|KNA13765.1\|	2.1e-16	34.03	hypothetical protein SOVF_113140 [Spinacia oleracea]	[more]
gi\|694380746\|ref\|XP_009366482.1\|	1.8e-15	38.46	PREDICTED: uncharacterized protein LOC103956239 [Pyrus x bretschneideri]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002068	A-crystallin/Hsp20_dom
IPR008978	HSP20-like_chaperone

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G05160.1	CSPI01G05160.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 21..105 score: 2.3
IPR002068	Alpha crystallin/Hsp20 domain	PROFILE	PS01031	HSP20	coord: 19..98 score: 13
IPR008978	HSP20-like chaperone	GENE3D	G3DSA:2.60.40.790		coord: 13..104 score: 7.1
IPR008978	HSP20-like chaperone	unknown	SSF49764	HSP20-like chaperones	coord: 9..101 score: 2.79
None	No IPR available	PANTHER	PTHR11527:SF171	ALPHA-CRYSTALLIN DOMAIN OF HEAT SHOCK PROTEIN-CONTAINING PROTEIN	coord: 11..119 score: 1.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI01G05160	Cla018648	Watermelon (97103) v1	cpiwmB066
CSPI01G05160	Csa1G031780	Cucumber (Chinese Long) v2	cpicuB000
CSPI01G05160	MELO3C001943	Melon (DHL92) v3.5.1	cpimeB024
CSPI01G05160	ClCG04G012640	Watermelon (Charleston Gray)	cpiwcgB059
CSPI01G05160	Lsi02G000290	Bottle gourd (USVL1VR-Ls)	cpilsiB021
CSPI01G05160	MELO3C001943.2	Melon (DHL92) v3.6.1	cpimedB023
CSPI01G05160	CsaV3_1G005060	Cucumber (Chinese Long) v3	cpicucB001
CSPI01G05160	Cla97C04G079640	Watermelon (97103) v2	cpiwmbB055
CSPI01G05160	Bhi08G001610	Wax gourd	cpiwgoB034
CSPI01G05160	Cucsa.112350	Cucumber (Gy14) v1	cgycpiB137
CSPI01G05160	CmaCh01G007570	Cucurbita maxima (Rimu)	cmacpiB431
CSPI01G05160	CmaCh13G011000	Cucurbita maxima (Rimu)	cmacpiB208
CSPI01G05160	CmoCh01G007920	Cucurbita moschata (Rifu)	cmocpiB421
CSPI01G05160	Cp4.1LG02g09900	Cucurbita pepo (Zucchini)	cpecpiB535
CSPI01G05160	Carg04737	Silver-seed gourd	carcpiB0421
CSPI01G05160	Carg06982	Silver-seed gourd	carcpiB0556

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI01G05160	Cucurbita moschata (Rifu)	cmocpiB195
CSPI01G05160	Cucurbita pepo (Zucchini)	cpecpiB519
CSPI01G05160	Cucumber (Gy14) v2	cgybcpiB001