Cucsa.112350 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.112350
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Heat shock protein 17
Location	scaffold00953 : 983804 .. 984636 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTAATCTAACAAAAACAATGGAGAAAGGTGAACCATCAGATGTGTTGTACGTGAAATTCGAGCCTTACTGCCAATGGAAAAAAaTCGAAGACTCTGATGTTCTTGAGGTTCAACTCCCAGGTATAATTTATCAACTTACGGTTTTCTCGGCATTCTCATTATATTCCAAGTGATTTGATATTCAAAACTGCACTTGTGAACAGAATTTAAGAAAGAAGAATTGAGGGTTCGGATAAAAAaCAACTCTATCCTTACGATTTCCGGTGAGCAACTGGCAGCCAAAGATGGGAAGAAGATGCATTTCAACAGAGACATCAAACTTCCAAAGGATGTATTCCCAGACGAAATTCGTGCTAAATTCGGTGGCAATATTCTTTCAATCACAATGCCTAAGAAAGCTAGCCCGCCAGAAATTAGCAAACCAAACCCGGACAATGCCTCTGAGGATAAACTAACACAATCCAATGGTAATGGTAAGCCGAAGAACTTCATATCCAAGTTAAAAAGTCCATTGTCGAGGTTGAAATTTAGCAAGGCAACCGCAACCGCTATGGCGACGGCTGTGGTGATTCTGGCCGTTGGAGTTTACTACTTGATTAAAAACTAAATGAAGTGTATATACACACACACATATATAGAATCAAATCCTTACAAATTTCAAATTGAATTCATGAATAAACAATTCATTTGCTAAGATCCTAATTAATCCCCCTTGATTTCTGCAATTTCTATGAACCTCGGAATAGCCATCAATCCCCATAGGTGAGAAACTGACAGTTCAACGGTGGGGGATTCCCAGATTATCCACTTTGATTTTATATTTGATGGTTTG

mRNA sequence

AGTAATCTAACAAAAACAATGGAGAAAGGTGAACCATCAGATGTGTTGTACGTGAAATTCGAGCCTTACTGCCAATGGAAAAAAATCGAAGACTCTGATGTTCTTGAGGTTCAACTCCCAGAATTTAAGAAAGAAGAATTGAGGGTTCGGATAAAAAACAACTCTATCCTTACGATTTCCGGTGAGCAACTGGCAGCCAAAGATGGGAAGAAGATGCATTTCAACAGAGACATCAAACTTCCAAAGGATGTATTCCCAGACGAAATTCGTGCTAAATTCGGTGGCAATATTCTTTCAATCACAATGCCTAAGAAAGCTAGCCCGCCAGAAATTAGCAAACCAAACCCGGACAATGCCTCTGAGGATAAACTAACACAATCCAATGGTAATGGTAAGCCGAAGAACTTCATATCCAAGTTAAAAAGTCCATTGTCGAGGTTGAAATTTAGCAAGGCAACCGCAACCGCTATGGCGACGGCTGTGGTGATTCTGGCCGTTGGAGTTTACTACTTGATTAAAAACTAAATGAAGTGTATATACACACACACATATATAGAATCAAATCCTTACAAATTTCAAATTGAATTCATGAATAAACAATTCATTTGCTAAGATCCTAATTAATCCCCCTTGATTTCTGCAATTTCTATGAACCTCGGAATAGCCATCAATCCCCATAGGTGAGAAACTGACAGTTCAACGGTGGGGGATTCCCAGATTATCCACTTTGATTTTATATTTGATGGTTTG

Coding sequence (CDS)

ATGGAGAAAGGTGAACCATCAGATGTGTTGTACGTGAAATTCGAGCCTTACTGCCAATGGAAAAAAaTCGAAGACTCTGATGTTCTTGAGGTTCAACTCCCAGAATTTAAGAAAGAAGAATTGAGGGTTCGGATAAAAAaCAACTCTATCCTTACGATTTCCGGTGAGCAACTGGCAGCCAAAGATGGGAAGAAGATGCATTTCAACAGAGACATCAAACTTCCAAAGGATGTATTCCCAGACGAAATTCGTGCTAAATTCGGTGGCAATATTCTTTCAATCACAATGCCTAAGAAAGCTAGCCCGCCAGAAATTAGCAAACCAAACCCGGACAATGCCTCTGAGGATAAACTAACACAATCCAATGGTAATGGTAAGCCGAAGAACTTCATATCCAAGTTAAAAAGTCCATTGTCGAGGTTGAAATTTAGCAAGGCAACCGCAACCGCTATGGCGACGGCTGTGGTGATTCTGGCCGTTGGAGTTTACTACTTGATTAAAAACTAA

Protein sequence

MEKGEPSDVLYVKFEPYCQWKKIEDSDVLEVQLPEFKKEELRVRIKNNSILTISGEQLAAKDGKKMHFNRDIKLPKDVFPDEIRAKFGGNILSITMPKKASPPEISKPNPDNASEDKLTQSNGNGKPKNFISKLKSPLSRLKFSKATATAMATAVVILAVGVYYLIKN*

Homology

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BLAST of Cucsa.112350 vs. Swiss-Prot
Match: HS178_ARATH (17.8 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP17.8 PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 5.5e-09
Identity = 31/89 (34.83%), Postives = 54/89 (60.67%), Query Frame = 1


Query: 20  WKKIEDSDVLEVQLPEFKKEELRVRIKNNSILTISGEQLAAKDGKK----------MHFN 79
           WK+  ++ V +  LP  KKEE++V I+++S+L ISGE+   K+ K+            F+
Sbjct: 52  WKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFS 111

Query: 80  RDIKLPKDVFPDEIRAKFGGNILSITMPK 99
           R  KLP++V  D+++A     +L++T+PK
Sbjct: 112 RKFKLPENVKMDQVKASMENGVLTVTVPK 140

[Close]

BLAST of Cucsa.112350 vs. Swiss-Prot
Match: HS17A_ARATH (17.6 kDa class I heat shock protein 1 OS=Arabidopsis thaliana GN=HSP17.6A PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.6e-08
Identity = 31/89 (34.83%), Postives = 55/89 (61.80%), Query Frame = 1


Query: 20  WKKIEDSDVLEVQLPEFKKEELRVRIKNNSILTISGEQLAAKDGKK--MH--------FN 79
           WK+  ++ V +  LP  KKEE++V I+++S+L ISGE+   K+ K+   H        F+
Sbjct: 50  WKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGGFS 109

Query: 80  RDIKLPKDVFPDEIRAKFGGNILSITMPK 99
           R  +LP++V  D+++A     +L++T+PK
Sbjct: 110 RKFRLPENVKMDQVKASMENGVLTVTVPK 138

[Close]

BLAST of Cucsa.112350 vs. Swiss-Prot
Match: HS16A_WHEAT (16.9 kDa class I heat shock protein 1 OS=Triticum aestivum GN=hsp16.9A PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.6e-08
Identity = 33/99 (33.33%), Postives = 57/99 (57.58%), Query Frame = 1


Query: 20  WKKIEDSDVLEVQLPEFKKEELRVRIKNNSILTISGEQLAAKDGK--KMH--------FN 79
           WK+  ++ V +V LP  KKEE++V +++ ++L +SGE+   K+ K  K H        F 
Sbjct: 48  WKETPEAHVFKVDLPGVKKEEVKVEVEDGNVLVVSGERSREKEDKNDKWHRVERSSGKFV 107

Query: 80  RDIKLPKDVFPDEIRAKFGGNILSITMPKKASPPEISKP 109
           R  +LP+D   +E++A     +L++T+PK     E+ KP
Sbjct: 108 RRFRLPEDAKVEEVKAGLENGVLTVTVPK----AEVKKP 142

[Close]

BLAST of Cucsa.112350 vs. Swiss-Prot
Match: HSP11_SOLLC (17.8 kDa class I heat shock protein OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 2.7e-08
Identity = 33/99 (33.33%), Postives = 56/99 (56.57%), Query Frame = 1


Query: 20  WKKIEDSDVLEVQLPEFKKEELRVRIKNNSILTISGEQLAAKDGK--KMH--------FN 79
           WK+  +  V +V LP  KKEE++V ++ + +L ISGE+   K+ K  K H        F 
Sbjct: 51  WKETPEPHVFKVDLPGLKKEEVKVEVEEDRVLQISGERNVEKEDKNDKWHRMERSSGKFM 110

Query: 80  RDIKLPKDVFPDEIRAKFGGNILSITMPKKASPPEISKP 109
           R  +LP++   D+++A     +L++T+PK+    E+ KP
Sbjct: 111 RRFRLPENAKMDQVKASMENGVLTVTVPKE----EVKKP 145

[Close]

BLAST of Cucsa.112350 vs. Swiss-Prot
Match: HS16C_ORYSJ (16.9 kDa class I heat shock protein 3 OS=Oryza sativa subsp. japonica GN=HSP16.9C PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 6.1e-08
Identity = 32/99 (32.32%), Postives = 55/99 (55.56%), Query Frame = 1


Query: 20  WKKIEDSDVLEVQLPEFKKEELRVRIKNNSILTISGEQLAAKDGK--KMH--------FN 79
           WK+  +S V +  LP  KKEE++V ++  ++L ISG++   K+ K  K H        F 
Sbjct: 46  WKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFM 105

Query: 80  RDIKLPKDVFPDEIRAKFGGNILSITMPKKASPPEISKP 109
           R  +LP++   D+++A     +L++T+PK     E+ KP
Sbjct: 106 RRFRLPENAKVDQVKASMENGVLTVTVPK----AEVKKP 140

[Close]

BLAST of Cucsa.112350 vs. TrEMBL
Match: A0A0A0LT66_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G031780 PE=3 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 3.8e-89
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 1


Query: 1   MEKGEPSDVLYVKFEPYCQWKKIEDSDVLEVQLPEFKKEELRVRIKNNSILTISGEQLAA 60
           MEKGEPSDVLYVKFEPYCQWKKIEDSDVLEVQLPEFKKEELRVRIKNNSILTISGEQLAA
Sbjct: 1   MEKGEPSDVLYVKFEPYCQWKKIEDSDVLEVQLPEFKKEELRVRIKNNSILTISGEQLAA 60

Query: 61  KDGKKMHFNRDIKLPKDVFPDEIRAKFGGNILSITMPKKASPPEISKPNPDNASEDKLTQ 120
           KDGKKMHFNRDIKLPKDVFPDEIRAKFGGNILSITMPKKASPPEISKPNPDNASEDKLTQ
Sbjct: 61  KDGKKMHFNRDIKLPKDVFPDEIRAKFGGNILSITMPKKASPPEISKPNPDNASEDKLTQ 120

Query: 121 SNGNGKPKNFISKLKSPLSRLKFSKATATAMATAVVILAVGVYYLIKN 169
           SNGNGKPKNFISKLKSPLSRLKFSKATATAMATAVVILAVGVYYLIKN
Sbjct: 121 SNGNGKPKNFISKLKSPLSRLKFSKATATAMATAVVILAVGVYYLIKN 168

[Close]

BLAST of Cucsa.112350 vs. TrEMBL
Match: A0A0K9R2N1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_113140 PE=3 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 2.7e-18
Identity = 64/191 (33.51%), Postives = 95/191 (49.74%), Query Frame = 1


Query: 11  YVKFEPYCQWKKIEDSDVLEVQLPEFKKEELRVRIKNNSILTISGEQLAAKDG-KKMHFN 70
           YV FEPYC+WKK E  + L   LP+FKK++LRV++ N  +L +SGE+    DG K+  F 
Sbjct: 15  YVDFEPYCEWKKEEGVETLVFHLPDFKKDQLRVQVNNLGVLKVSGERPTTADGTKRNRFL 74

Query: 71  RDIKLPKDVFPDEIRAKFGGNILSITMPKKASP--------PEISK---PNPDNASEDK- 130
           ++ K+P+    ++IRAKF G  L + MPKKASP        PE +    P P+   + K 
Sbjct: 75  KETKIPQGCDINDIRAKFSGGHLHVAMPKKASPLIEKQQMKPETTSSGGPKPEATQKPKA 134

Query: 131 ------------LTQSNGNGKPKNFISKLK--------SPLSRLKFSKATATAMATAV-V 168
                       L+  NG         ++K        + L RL+  K    ++  AV  
Sbjct: 135 EVLVPNAEKLKALSSENGKAGTSTSYDQMKDENIFGLGNALGRLQVQKKVNVSLGVAVAA 194

[Close]

BLAST of Cucsa.112350 vs. TrEMBL
Match: A0A0J8CCI8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g109980 PE=3 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 2.9e-17
Identity = 61/189 (32.28%), Postives = 97/189 (51.32%), Query Frame = 1


Query: 11  YVKFEPYCQWKKIEDSDVLEVQLPEFKKEELRVRIKNNSILTISGEQLAAKDG-KKMHFN 70
           YV FEPYC+WKK +  + L   LP+FK+++LRV++ N  ++ +SGE+    DG ++  F 
Sbjct: 15  YVDFEPYCEWKKDDGVETLVFHLPDFKRDQLRVQVNNLGVIKVSGERQTTADGTQRSRFL 74

Query: 71  RDIKLPKDVFPDEIRAKFGGNILSITMPKKASPP--EISKPNPD----NASEDKLTQ--- 130
           ++ K+P+    ++IRAKF G  L + MP KA+PP  +  KP P+    +A E ++TQ   
Sbjct: 75  KETKIPQGCEINDIRAKFSGGHLHVVMPIKAAPPVQQQQKPKPEITSSSAPESEITQKPK 134

Query: 131 --------------SNGNGKP-------KNFISKLKSPLSRLKFSKATATAMATAV-VIL 168
                         S+ NGK         N          RL+  K  A ++  AV  ++
Sbjct: 135 AEALAPNGDNLKASSSENGKAGGTSTIYDNIFGNGSYSQGRLQVQKKVAVSLGVAVAAMV 194

[Close]

BLAST of Cucsa.112350 vs. TrEMBL
Match: W9QEJ7_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_014720 PE=3 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.5e-16
Identity = 45/87 (51.72%), Postives = 63/87 (72.41%), Query Frame = 1


Query: 13  KFEPYCQWKKIEDSDVLEVQLPEFKKEELRVRIKNNSILTISGEQLAAKDGKKMHFNRDI 72
           +FEP+CQW++ ++ D+LEV L  FK+E LRV++ N  ILTISGEQ + +D K   F ++I
Sbjct: 4   EFEPFCQWRRGQERDILEVHLKGFKREHLRVQMNNGHILTISGEQ-SVEDYKIRRFRKEI 63

Query: 73  KLPKDVFPDEIRAKFGGNILSITMPKK 100
           K+ KD  PD+IRAKF   IL IT+P +
Sbjct: 64  KVSKDCTPDQIRAKFASGILYITLPMR 89

[Close]

BLAST of Cucsa.112350 vs. TrEMBL
Match: A0A0D2N3J8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G251000 PE=3 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 7.2e-16
Identity = 63/181 (34.81%), Postives = 88/181 (48.62%), Query Frame = 1


Query: 11  YVKFEPYCQWKKIEDSDVLEVQLPEFKKEELRVRIKNNSILTISGEQLAAKDGKKMHFNR 70
           Y   EP  Q+ K E  D++E Q+ +FKK++LRV   +  +LT+SGE+   + GK++ F +
Sbjct: 5   YQDVEPEFQYHKGETHDIIEFQVKDFKKDQLRVHFSSKGVLTVSGER-PQEGGKRIRFRK 64

Query: 71  DIKLPKDVFPDEIRAKFGGNILSITMPKKASPPEISKPNPDNASEDKLTQSNGNGKPKNF 130
           DI  PKD  P+EIRAK    +L IT+PKK        P P      K  Q   NGK K  
Sbjct: 65  DINFPKDCEPNEIRAKLSSGVLFITIPKK------DAPQPPQRDSLKQVQQQDNGKLKQG 124

Query: 131 IS---------------------KLKSPLSRLKFSKATA---TAMATAVVILAVGVYYLI 168
            S                     + KS +S LK  K TA    A  T V ++ V ++Y+ 
Sbjct: 125 GSSSEEAKGAMATPNENAAMPKPESKSFISGLKMEKKTALKVVANVTVVSLVFVVLFYVY 178

[Close]

BLAST of Cucsa.112350 vs. TAIR10
Match: AT1G54400.1 (AT1G54400.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 84.3 bits (207), Expect = 7.6e-17
Identity = 56/170 (32.94%), Postives = 85/170 (50.00%), Query Frame = 1


Query: 11  YVKFEPYCQWKKIEDSDVLEVQLPE-FKKEELRVRIKNNSILTISGEQLAAKDGKKMHFN 70
           Y + EP+C+W++ ED D+LE+ LP   KKE L+++I N+ +LTI+G        K + F 
Sbjct: 13  YDEIEPFCRWRRTEDIDILELHLPSGLKKEHLKIQINNSGVLTITG-GCPVDQTKTIRFM 72

Query: 71  RDIKLPKDVFPDEIRAKFGGNILSITMPK------------KASPPEISKPNPDNASEDK 130
           ++ K+ KD   +EIRAKF   +L +TMPK            K + P+   P  D    + 
Sbjct: 73  KETKVAKDCKRNEIRAKFSKGVLYVTMPKTIPIAAGLSVSLKGATPQHQTPKTDEGMRNV 132

Query: 131 LTQSNGNGKPKNFISKLKSPLSRLKFSKATATAMATAVVILAVGVYYLIK 168
              S+       F SK  S   RL   + T      AVV++A  V  ++K
Sbjct: 133 ANCSS------EFYSKFGSLKQRL--WRKTVVEGVAAVVVVAAAVLGVVK 173

[Close]

BLAST of Cucsa.112350 vs. TAIR10
Match: AT1G07400.1 (AT1G07400.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 62.4 bits (150), Expect = 3.1e-10
Identity = 31/89 (34.83%), Postives = 54/89 (60.67%), Query Frame = 1


Query: 20  WKKIEDSDVLEVQLPEFKKEELRVRIKNNSILTISGEQLAAKDGKK----------MHFN 79
           WK+  ++ V +  LP  KKEE++V I+++S+L ISGE+   K+ K+            F+
Sbjct: 52  WKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFS 111

Query: 80  RDIKLPKDVFPDEIRAKFGGNILSITMPK 99
           R  KLP++V  D+++A     +L++T+PK
Sbjct: 112 RKFKLPENVKMDQVKASMENGVLTVTVPK 140

[Close]

BLAST of Cucsa.112350 vs. TAIR10
Match: AT5G20970.1 (AT5G20970.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 61.6 bits (148), Expect = 5.3e-10
Identity = 42/126 (33.33%), Postives = 63/126 (50.00%), Query Frame = 1


Query: 10  LYVKFEPYCQWKKIEDSDVLEVQLPEFKKEELRVRIKNNSILTISGEQLAAKDGKKMHFN 69
           +Y +FEP  +W    D++VL   LP FKKE+L+V +     L ++GE+      K + F+
Sbjct: 9   VYQEFEPATRWTSEPDAEVLVADLPGFKKEQLKVSVTATRKLRLTGER-PTGGNKWIRFH 68

Query: 70  RDIKLPKDVFPDEIRAKFGGNILSITMPK-KASPPEISKPNP-DNASEDKLTQSNGNGKP 129
           ++I +P  V  D + A F  N L I  PK K   P+   P P      D+  +  G G P
Sbjct: 69  QEIPVPLTVDIDSVSAMFKDNKLYIRHPKLKTEIPQTKPPTPVIMKPHDQHERKQGQG-P 128

Query: 130 KNFISK 134
           K  + K
Sbjct: 129 KAMVEK 132

[Close]

BLAST of Cucsa.112350 vs. TAIR10
Match: AT1G59860.1 (AT1G59860.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 60.8 bits (146), Expect = 9.0e-10
Identity = 31/89 (34.83%), Postives = 55/89 (61.80%), Query Frame = 1


Query: 20  WKKIEDSDVLEVQLPEFKKEELRVRIKNNSILTISGEQLAAKDGKK--MH--------FN 79
           WK+  ++ V +  LP  KKEE++V I+++S+L ISGE+   K+ K+   H        F+
Sbjct: 50  WKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGGFS 109

Query: 80  RDIKLPKDVFPDEIRAKFGGNILSITMPK 99
           R  +LP++V  D+++A     +L++T+PK
Sbjct: 110 RKFRLPENVKMDQVKASMENGVLTVTVPK 138

[Close]

BLAST of Cucsa.112350 vs. TAIR10
Match: AT2G27140.1 (AT2G27140.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 60.8 bits (146), Expect = 9.0e-10
Identity = 32/115 (27.83%), Postives = 58/115 (50.43%), Query Frame = 1


Query: 10  LYVKFEPYCQWKKIEDSDVLEVQLPEFKKEELRVRIKNNSILTISGEQLAAKDGKKMHFN 69
           +Y +FEP   WK  +  + L + LP F+KE+L+V++     L + G++ A  + K + F 
Sbjct: 13  IYDEFEPLSNWKTEQGFEALTIYLPGFRKEQLKVQVTTTRKLRVMGDRPAGAN-KWIRFR 72

Query: 70  RDIKLPKDVFPDEIRAKFGGNILSITMPK-------------KASPPEISKPNPD 112
           ++  +P ++  D + AKF G  L + +P+                PP + K NP+
Sbjct: 73  KEFPIPPNIDVDSVSAKFEGANLVVRLPRTEPMGKQPSPIGTATKPPPVPKENPN 126

[Close]

BLAST of Cucsa.112350 vs. NCBI nr
Match: gi|449439223|ref|XP_004137386.1| (PREDICTED: 18.1 kDa class I heat shock protein [Cucumis sativus])

HSP 1 Score: 335.5 bits (859), Expect = 5.4e-89
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 1


Query: 1   MEKGEPSDVLYVKFEPYCQWKKIEDSDVLEVQLPEFKKEELRVRIKNNSILTISGEQLAA 60
           MEKGEPSDVLYVKFEPYCQWKKIEDSDVLEVQLPEFKKEELRVRIKNNSILTISGEQLAA
Sbjct: 1   MEKGEPSDVLYVKFEPYCQWKKIEDSDVLEVQLPEFKKEELRVRIKNNSILTISGEQLAA 60

Query: 61  KDGKKMHFNRDIKLPKDVFPDEIRAKFGGNILSITMPKKASPPEISKPNPDNASEDKLTQ 120
           KDGKKMHFNRDIKLPKDVFPDEIRAKFGGNILSITMPKKASPPEISKPNPDNASEDKLTQ
Sbjct: 61  KDGKKMHFNRDIKLPKDVFPDEIRAKFGGNILSITMPKKASPPEISKPNPDNASEDKLTQ 120

Query: 121 SNGNGKPKNFISKLKSPLSRLKFSKATATAMATAVVILAVGVYYLIKN 169
           SNGNGKPKNFISKLKSPLSRLKFSKATATAMATAVVILAVGVYYLIKN
Sbjct: 121 SNGNGKPKNFISKLKSPLSRLKFSKATATAMATAVVILAVGVYYLIKN 168

[Close]

BLAST of Cucsa.112350 vs. NCBI nr
Match: gi|659066279|ref|XP_008465577.1| (PREDICTED: 16.9 kDa class I heat shock protein 1 [Cucumis melo])

HSP 1 Score: 310.5 bits (794), Expect = 1.9e-81
Identity = 151/168 (89.88%), Postives = 161/168 (95.83%), Query Frame = 1


Query: 1   MEKGEPSDVLYVKFEPYCQWKKIEDSDVLEVQLPEFKKEELRVRIKNNSILTISGEQLAA 60
           MEKGEPS VLY +FEP+C+WKK+EDSDVLEV LPEFKKEELRVRIKNNSILT+SGE L A
Sbjct: 1   MEKGEPSGVLYEEFEPFCKWKKLEDSDVLEVHLPEFKKEELRVRIKNNSILTLSGEHLTA 60

Query: 61  KDGKKMHFNRDIKLPKDVFPDEIRAKFGGNILSITMPKKASPPEISKPNPDNASEDKLTQ 120
           KDGKKMHFNR+IKLPKD++PDEIRAKFGGN+LSITMPKKASPPEISKPNPDNASEDKLTQ
Sbjct: 61  KDGKKMHFNREIKLPKDIYPDEIRAKFGGNVLSITMPKKASPPEISKPNPDNASEDKLTQ 120

Query: 121 SNGNGKPKNFISKLKSPLSRLKFSKATATAMATAVVILAVGVYYLIKN 169
           SNGNGKPKNFIS+LKSPLSRLKFSK TATAMA AVVILAVGVYYLIKN
Sbjct: 121 SNGNGKPKNFISRLKSPLSRLKFSKETATAMAVAVVILAVGVYYLIKN 168

[Close]

BLAST of Cucsa.112350 vs. NCBI nr
Match: gi|902198693|gb|KNA13765.1| (hypothetical protein SOVF_113140 [Spinacia oleracea])

HSP 1 Score: 100.1 bits (248), Expect = 3.8e-18
Identity = 64/191 (33.51%), Postives = 95/191 (49.74%), Query Frame = 1


Query: 11  YVKFEPYCQWKKIEDSDVLEVQLPEFKKEELRVRIKNNSILTISGEQLAAKDG-KKMHFN 70
           YV FEPYC+WKK E  + L   LP+FKK++LRV++ N  +L +SGE+    DG K+  F 
Sbjct: 15  YVDFEPYCEWKKEEGVETLVFHLPDFKKDQLRVQVNNLGVLKVSGERPTTADGTKRNRFL 74

Query: 71  RDIKLPKDVFPDEIRAKFGGNILSITMPKKASP--------PEISK---PNPDNASEDK- 130
           ++ K+P+    ++IRAKF G  L + MPKKASP        PE +    P P+   + K 
Sbjct: 75  KETKIPQGCDINDIRAKFSGGHLHVAMPKKASPLIEKQQMKPETTSSGGPKPEATQKPKA 134

Query: 131 ------------LTQSNGNGKPKNFISKLK--------SPLSRLKFSKATATAMATAV-V 168
                       L+  NG         ++K        + L RL+  K    ++  AV  
Sbjct: 135 EVLVPNAEKLKALSSENGKAGTSTSYDQMKDENIFGLGNALGRLQVQKKVNVSLGVAVAA 194

[Close]

BLAST of Cucsa.112350 vs. NCBI nr
Match: gi|694380746|ref|XP_009366482.1| (PREDICTED: uncharacterized protein LOC103956239 [Pyrus x bretschneideri])

HSP 1 Score: 97.1 bits (240), Expect = 3.2e-17
Identity = 60/156 (38.46%), Postives = 92/156 (58.97%), Query Frame = 1


Query: 11  YVKFEPYCQWKKIEDSDVLEVQLPEFKKEELRVRIKNNSILTISGEQLAAKD---GKKMH 70
           Y  FEP+CQW K E  ++LEV LP FK++++RV+I N  IL ISG+Q   ++        
Sbjct: 13  YEDFEPFCQWNKEEGFNILEVHLPGFKRQDIRVQINNLGILNISGKQPRVEETTSALPSR 72

Query: 71  FNRDIKLPKDVFPDEIRAKFGGNILSITMPKKASPPEISKPNPDNASEDKLTQSNGNGKP 130
           F R+IK+ K+   + IRAKF G ILSIT+PKKA   + S  +  +   D    S+ N   
Sbjct: 73  FCREIKISKNCTTNGIRAKFSGGILSITIPKKA---QHSNASAGSHGADNAAWSSVN--- 132

Query: 131 KNFISKLKSPLSRLKFSKATATAMATAVVILAVGVY 164
            +++  L+S + R + SK TA  +   ++++A+G Y
Sbjct: 133 -DYLVCLRSRVLRPRLSKKTAVVV---ILVMALGGY 158

[Close]

BLAST of Cucsa.112350 vs. NCBI nr
Match: gi|731333599|ref|XP_010677816.1| (PREDICTED: 22.0 kDa heat shock protein-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 96.7 bits (239), Expect = 4.2e-17
Identity = 61/189 (32.28%), Postives = 97/189 (51.32%), Query Frame = 1


Query: 11  YVKFEPYCQWKKIEDSDVLEVQLPEFKKEELRVRIKNNSILTISGEQLAAKDG-KKMHFN 70
           YV FEPYC+WKK +  + L   LP+FK+++LRV++ N  ++ +SGE+    DG ++  F 
Sbjct: 15  YVDFEPYCEWKKDDGVETLVFHLPDFKRDQLRVQVNNLGVIKVSGERQTTADGTQRSRFL 74

Query: 71  RDIKLPKDVFPDEIRAKFGGNILSITMPKKASPP--EISKPNPD----NASEDKLTQ--- 130
           ++ K+P+    ++IRAKF G  L + MP KA+PP  +  KP P+    +A E ++TQ   
Sbjct: 75  KETKIPQGCEINDIRAKFSGGHLHVVMPIKAAPPVQQQQKPKPEITSSSAPESEITQKPK 134

Query: 131 --------------SNGNGKP-------KNFISKLKSPLSRLKFSKATATAMATAV-VIL 168
                         S+ NGK         N          RL+  K  A ++  AV  ++
Sbjct: 135 AEALAPNGDNLKASSSENGKAGGTSTIYDNIFGNGSYSQGRLQVQKKVAVSLGVAVAAMV 194

The following BLAST results are available for this feature:

BLAST of Cucsa.112350 vs. Swiss-Prot


Match Name	E-value	Identity	Description
HS178_ARATH	5.5e-09	34.83	17.8 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP17.8 PE=1 SV=1	[more]
HS17A_ARATH	1.6e-08	34.83	17.6 kDa class I heat shock protein 1 OS=Arabidopsis thaliana GN=HSP17.6A PE=1 S...	[more]
HS16A_WHEAT	1.6e-08	33.33	16.9 kDa class I heat shock protein 1 OS=Triticum aestivum GN=hsp16.9A PE=2 SV=1	[more]
HSP11_SOLLC	2.7e-08	33.33	17.8 kDa class I heat shock protein OS=Solanum lycopersicum PE=2 SV=1	[more]
HS16C_ORYSJ	6.1e-08	32.32	16.9 kDa class I heat shock protein 3 OS=Oryza sativa subsp. japonica GN=HSP16.9...	[more]

BLAST of Cucsa.112350 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LT66_CUCSA	3.8e-89	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G031780 PE=3 SV=1	[more]
A0A0K9R2N1_SPIOL	2.7e-18	33.51	Uncharacterized protein OS=Spinacia oleracea GN=SOVF_113140 PE=3 SV=1	[more]
A0A0J8CCI8_BETVU	2.9e-17	32.28	Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g109980 PE=3 S...	[more]
W9QEJ7_9ROSA	1.5e-16	51.72	Uncharacterized protein OS=Morus notabilis GN=L484_014720 PE=3 SV=1	[more]
A0A0D2N3J8_GOSRA	7.2e-16	34.81	Uncharacterized protein OS=Gossypium raimondii GN=B456_004G251000 PE=3 SV=1	[more]

BLAST of Cucsa.112350 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G54400.1	7.6e-17	32.94	HSP20-like chaperones superfamily protein	[more]
AT1G07400.1	3.1e-10	34.83	HSP20-like chaperones superfamily protein	[more]
AT5G20970.1	5.3e-10	33.33	HSP20-like chaperones superfamily protein	[more]
AT1G59860.1	9.0e-10	34.83	HSP20-like chaperones superfamily protein	[more]
AT2G27140.1	9.0e-10	27.83	HSP20-like chaperones superfamily protein	[more]

BLAST of Cucsa.112350 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449439223\|ref\|XP_004137386.1\|	5.4e-89	100.00	PREDICTED: 18.1 kDa class I heat shock protein [Cucumis sativus]	[more]
gi\|659066279\|ref\|XP_008465577.1\|	1.9e-81	89.88	PREDICTED: 16.9 kDa class I heat shock protein 1 [Cucumis melo]	[more]
gi\|902198693\|gb\|KNA13765.1\|	3.8e-18	33.51	hypothetical protein SOVF_113140 [Spinacia oleracea]	[more]
gi\|694380746\|ref\|XP_009366482.1\|	3.2e-17	38.46	PREDICTED: uncharacterized protein LOC103956239 [Pyrus x bretschneideri]	[more]
gi\|731333599\|ref\|XP_010677816.1\|	4.2e-17	32.28	PREDICTED: 22.0 kDa heat shock protein-like [Beta vulgaris subsp. vulgaris]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002068	A-crystallin/Hsp20_dom
IPR008978	HSP20-like_chaperone

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.112350.1	Cucsa.112350.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 21..104 score: 2.9
IPR002068	Alpha crystallin/Hsp20 domain	PROFILE	PS01031	HSP20	coord: 19..98 score: 13
IPR008978	HSP20-like chaperone	GENE3D	G3DSA:2.60.40.790		coord: 13..103 score: 1.2
IPR008978	HSP20-like chaperone	unknown	SSF49764	HSP20-like chaperones	coord: 9..101 score: 3.14
None	No IPR available	PANTHER	PTHR11527:SF171	ALPHA-CRYSTALLIN DOMAIN OF HEAT SHOCK PROTEIN-CONTAINING PROTEIN	coord: 11..119 score: 2.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.112350	Cla018648	Watermelon (97103) v1	cgywmB163
Cucsa.112350	Csa1G031780	Cucumber (Chinese Long) v2	cgycuB137
Cucsa.112350	MELO3C001943	Melon (DHL92) v3.5.1	cgymeB156
Cucsa.112350	ClCG04G012640	Watermelon (Charleston Gray)	cgywcgB160
Cucsa.112350	CSPI01G05160	Wild cucumber (PI 183967)	cgycpiB137
Cucsa.112350	CmaCh13G011000	Cucurbita maxima (Rimu)	cgycmaB0262
Cucsa.112350	CmaCh01G007570	Cucurbita maxima (Rimu)	cgycmaB0271
Cucsa.112350	CmoCh13G011490	Cucurbita moschata (Rifu)	cgycmoB0260
Cucsa.112350	CmoCh01G007920	Cucurbita moschata (Rifu)	cgycmoB0267
Cucsa.112350	Lsi02G000290	Bottle gourd (USVL1VR-Ls)	cgylsiB148
Cucsa.112350	Cp4.1LG02g09900	Cucurbita pepo (Zucchini)	cgycpeB0261
Cucsa.112350	MELO3C001943.2	Melon (DHL92) v3.6.1	cgymedB156
Cucsa.112350	CsaV3_1G005060	Cucumber (Chinese Long) v3	cgycucB143
Cucsa.112350	Cla97C04G079640	Watermelon (97103) v2	cgywmbB156
Cucsa.112350	Bhi08G001610	Wax gourd	cgywgoB177
Cucsa.112350	Carg06982	Silver-seed gourd	carcgyB0597
Cucsa.112350	Carg04737	Silver-seed gourd	carcgyB0450

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.112350	Cucurbita pepo (Zucchini)	cgycpeB0259