CsaV3_1G005060 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_1G005060
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	16.9 kDa class I heat shock protein 1
Location	chr1 : 3382876 .. 3383465 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAAAGGTGAACCATCAGATGTGTTGTACGTGAAATTCGAGCCTTACTGCCAATGGAAAAAAATCGAAGACTCTGATGTTCTTGAGGTTCAACTCCCAGGTATAATTTATCAACTTACGGTTTTCTCGGCATTCTCATTATATTCCAAGTGATTTGATATTCAAAACTGCACTTGTGAACAGAATTTAAGAAAGAAGAATTGAGGGTTCGGATAAAAAACAACTCTATCCTTACGATTTCCGGTGAGCAACTGGCAGCCAAAGATGGGAAGAAGATGCATTTCAACAGAGACATCAAACTTCCAAAGGATGTATTCCCAGACGAAATTCGTGCTAAATTCGGTGGCAATATTCTTTCAATCACAATGCCTAAGAAAGCTAGCCCGCCAGAAATTAGCAAACCAAACCCGGACAATGCCTCTGAGGATAAACTAACACAATCCAATGGTAATGGTAAGCCGAAGAACTTCATATCCAAGTTAAAAAGTCCATTGTCGAGGTTGAAATTTAGCAAGGCAACCGCAACCGCTATGGCGACGGCTGTGGTGATTCTGGCCGTTGGAGTTTACTACTTGATTAAAAACTAA

mRNA sequence

ATGGAGAAAGGTGAACCATCAGATGTGTTGTACGTGAAATTCGAGCCTTACTGCCAATGGAAAAAAATCGAAGACTCTGATGTTCTTGAGGTTCAACTCCCAGAATTTAAGAAAGAAGAATTGAGGGTTCGGATAAAAAACAACTCTATCCTTACGATTTCCGGTGAGCAACTGGCAGCCAAAGATGGGAAGAAGATGCATTTCAACAGAGACATCAAACTTCCAAAGGATGTATTCCCAGACGAAATTCGTGCTAAATTCGGTGGCAATATTCTTTCAATCACAATGCCTAAGAAAGCTAGCCCGCCAGAAATTAGCAAACCAAACCCGGACAATGCCTCTGAGGATAAACTAACACAATCCAATGGTAATGGTAAGCCGAAGAACTTCATATCCAAGTTAAAAAGTCCATTGTCGAGGTTGAAATTTAGCAAGGCAACCGCAACCGCTATGGCGACGGCTGTGGTGATTCTGGCCGTTGGAGTTTACTACTTGATTAAAAACTAA

Coding sequence (CDS)

ATGGAGAAAGGTGAACCATCAGATGTGTTGTACGTGAAATTCGAGCCTTACTGCCAATGGAAAAAAATCGAAGACTCTGATGTTCTTGAGGTTCAACTCCCAGAATTTAAGAAAGAAGAATTGAGGGTTCGGATAAAAAACAACTCTATCCTTACGATTTCCGGTGAGCAACTGGCAGCCAAAGATGGGAAGAAGATGCATTTCAACAGAGACATCAAACTTCCAAAGGATGTATTCCCAGACGAAATTCGTGCTAAATTCGGTGGCAATATTCTTTCAATCACAATGCCTAAGAAAGCTAGCCCGCCAGAAATTAGCAAACCAAACCCGGACAATGCCTCTGAGGATAAACTAACACAATCCAATGGTAATGGTAAGCCGAAGAACTTCATATCCAAGTTAAAAAGTCCATTGTCGAGGTTGAAATTTAGCAAGGCAACCGCAACCGCTATGGCGACGGCTGTGGTGATTCTGGCCGTTGGAGTTTACTACTTGATTAAAAACTAA

Protein sequence

MEKGEPSDVLYVKFEPYCQWKKIEDSDVLEVQLPEFKKEELRVRIKNNSILTISGEQLAAKDGKKMHFNRDIKLPKDVFPDEIRAKFGGNILSITMPKKASPPEISKPNPDNASEDKLTQSNGNGKPKNFISKLKSPLSRLKFSKATATAMATAVVILAVGVYYLIKN

Homology

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BLAST of CsaV3_1G005060 vs. NCBI nr
Match: XP_004137386.1 (PREDICTED: 18.1 kDa class I heat shock protein [Cucumis sativus] >KGN63957.1 hypothetical protein Csa_1G031780 [Cucumis sativus])

HSP 1 Score: 329.3 bits (843), Expect = 7.5e-87
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MEKGEPSDVLYVKFEPYCQWKKIEDSDVLEVQLPEFKKEELRVRIKNNSILTISGEQLAA 60
           MEKGEPSDVLYVKFEPYCQWKKIEDSDVLEVQLPEFKKEELRVRIKNNSILTISGEQLAA
Sbjct: 1   MEKGEPSDVLYVKFEPYCQWKKIEDSDVLEVQLPEFKKEELRVRIKNNSILTISGEQLAA 60

Query: 61  KDGKKMHFNRDIKLPKDVFPDEIRAKFGGNILSITMPKKASPPEISKPNPDNASEDKLTQ 120
           KDGKKMHFNRDIKLPKDVFPDEIRAKFGGNILSITMPKKASPPEISKPNPDNASEDKLTQ
Sbjct: 61  KDGKKMHFNRDIKLPKDVFPDEIRAKFGGNILSITMPKKASPPEISKPNPDNASEDKLTQ 120

Query: 121 SNGNGKPKNFISKLKSPLSRLKFSKATATAMATAVVILAVGVYYLIKN 169
           SNGNGKPKNFISKLKSPLSRLKFSKATATAMATAVVILAVGVYYLIKN
Sbjct: 121 SNGNGKPKNFISKLKSPLSRLKFSKATATAMATAVVILAVGVYYLIKN 168

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BLAST of CsaV3_1G005060 vs. NCBI nr
Match: XP_008465577.1 (PREDICTED: 16.9 kDa class I heat shock protein 1 [Cucumis melo])

HSP 1 Score: 304.3 bits (778), Expect = 2.6e-79
Identity = 151/168 (89.88%), Postives = 161/168 (95.83%), Query Frame = 0


Query: 1   MEKGEPSDVLYVKFEPYCQWKKIEDSDVLEVQLPEFKKEELRVRIKNNSILTISGEQLAA 60
           MEKGEPS VLY +FEP+C+WKK+EDSDVLEV LPEFKKEELRVRIKNNSILT+SGE L A
Sbjct: 1   MEKGEPSGVLYEEFEPFCKWKKLEDSDVLEVHLPEFKKEELRVRIKNNSILTLSGEHLTA 60

Query: 61  KDGKKMHFNRDIKLPKDVFPDEIRAKFGGNILSITMPKKASPPEISKPNPDNASEDKLTQ 120
           KDGKKMHFNR+IKLPKD++PDEIRAKFGGN+LSITMPKKASPPEISKPNPDNASEDKLTQ
Sbjct: 61  KDGKKMHFNREIKLPKDIYPDEIRAKFGGNVLSITMPKKASPPEISKPNPDNASEDKLTQ 120

Query: 121 SNGNGKPKNFISKLKSPLSRLKFSKATATAMATAVVILAVGVYYLIKN 169
           SNGNGKPKNFIS+LKSPLSRLKFSK TATAMA AVVILAVGVYYLIKN
Sbjct: 121 SNGNGKPKNFISRLKSPLSRLKFSKETATAMAVAVVILAVGVYYLIKN 168

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BLAST of CsaV3_1G005060 vs. NCBI nr
Match: XP_023001660.1 (17.8 kDa class I heat shock protein-like [Cucurbita maxima])

HSP 1 Score: 235.0 bits (598), Expect = 1.9e-58
Identity = 121/170 (71.18%), Postives = 139/170 (81.76%), Query Frame = 0


Query: 1   MEKGEPSDVLYVKFEPYCQWKKIEDSD--VLEVQLPEFKKEELRVRIKNNSILTISGEQL 60
           MEKGE S+V Y +FEP+C+WKK++DSD  VLEV LPEFKKEELRVRIKNNSIL ISGE L
Sbjct: 1   MEKGEASNVSYEEFEPFCKWKKLDDSDVHVLEVHLPEFKKEELRVRIKNNSILAISGEHL 60

Query: 61  AAKDGKKMHFNRDIKLPKDVFPDEIRAKFGGNILSITMPKKASPPEISKPNPDNASEDKL 120
            A DGKKM FNR+IKLPKD++PD+IRAKFGG++LSITMPKK S  EI KP  D ASE   
Sbjct: 61  TANDGKKMQFNREIKLPKDIYPDQIRAKFGGSVLSITMPKKPSSAEIGKPKADAASEGND 120

Query: 121 TQSNGNGKPKNFISKLKSPLSRLKFSKATATAMATAVVILAVGVYYLIKN 169
           T  N +G+PKN IS+L SPLSRLKFSK  ATA+A AV+ILA G YYL+KN
Sbjct: 121 TAPNDDGEPKNLISRLTSPLSRLKFSKKKATALAAAVLILAFGAYYLVKN 170

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BLAST of CsaV3_1G005060 vs. NCBI nr
Match: XP_023520341.1 (17.8 kDa class I heat shock protein-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 233.0 bits (593), Expect = 7.3e-58
Identity = 124/170 (72.94%), Postives = 139/170 (81.76%), Query Frame = 0


Query: 1   MEKGEPSDVLYVKFEPYCQWKKIEDSD--VLEVQLPEFKKEELRVRIKNNSILTISGEQL 60
           MEKGE S+V Y +FEP+C+WKK++DSD  VLEV LPEFKKEELRVRIKNNSIL ISGE L
Sbjct: 1   MEKGEASNVSYEEFEPFCKWKKLDDSDVHVLEVHLPEFKKEELRVRIKNNSILAISGEHL 60

Query: 61  AAKDGKKMHFNRDIKLPKDVFPDEIRAKFGGNILSITMPKKASPPEISKPNPDNASEDKL 120
            A DGKKM FNR+IKLPKD++PD+IRAKFGG++LSITMPKK S  EI KP  D ASE   
Sbjct: 61  -ANDGKKMQFNREIKLPKDIYPDQIRAKFGGSVLSITMPKKPSSAEIGKPKADAASEGND 120

Query: 121 TQSNGNGKPKNFISKLKSPLSRLKFSKATATAMATAVVILAVGVYYLIKN 169
           T  N +GKPKN IS+L SPLSRLKFSK  ATA+A AVVILA G YYLIKN
Sbjct: 121 TAPNDDGKPKNLISRLTSPLSRLKFSKKKATALAAAVVILAFGAYYLIKN 169

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BLAST of CsaV3_1G005060 vs. NCBI nr
Match: XP_022923784.1 (17.8 kDa class I heat shock protein-like [Cucurbita moschata])

HSP 1 Score: 232.3 bits (591), Expect = 1.3e-57
Identity = 124/170 (72.94%), Postives = 139/170 (81.76%), Query Frame = 0


Query: 1   MEKGEPSDVLYVKFEPYCQWKKIEDSD--VLEVQLPEFKKEELRVRIKNNSILTISGEQL 60
           MEKGE S+V Y +FEP+C+WKK++DSD  VLEV LPEFKKEELRVRIKNNSIL ISGE L
Sbjct: 1   MEKGEASNVSYEEFEPFCKWKKLDDSDVHVLEVHLPEFKKEELRVRIKNNSILAISGEHL 60

Query: 61  AAKDGKKMHFNRDIKLPKDVFPDEIRAKFGGNILSITMPKKASPPEISKPNPDNASEDKL 120
            A DGKKM FNR+IKLPKD++PD+IRAKFGG++LSITMPKK S  E SKP  D ASE   
Sbjct: 61  -ANDGKKMQFNREIKLPKDIYPDQIRAKFGGSVLSITMPKKPSSAESSKPKADAASEGND 120

Query: 121 TQSNGNGKPKNFISKLKSPLSRLKFSKATATAMATAVVILAVGVYYLIKN 169
           T  N +GKPKN IS+L SPLSRLKFSK  ATA+A AVVILA G YYLIKN
Sbjct: 121 TAPNDDGKPKNLISRLTSPLSRLKFSKKKATALAAAVVILAFGAYYLIKN 169

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BLAST of CsaV3_1G005060 vs. TAIR10
Match: AT1G54400.1 (HSP20-like chaperones superfamily protein)

HSP 1 Score: 78.6 bits (192), Expect = 4.2e-15
Identity = 56/170 (32.94%), Postives = 85/170 (50.00%), Query Frame = 0


Query: 11  YVKFEPYCQWKKIEDSDVLEVQLPE-FKKEELRVRIKNNSILTISGEQLAAKDGKKMHFN 70
           Y + EP+C+W++ ED D+LE+ LP   KKE L+++I N+ +LTI+G        K + F 
Sbjct: 13  YDEIEPFCRWRRTEDIDILELHLPSGLKKEHLKIQINNSGVLTITG-GCPVDQTKTIRFM 72

Query: 71  RDIKLPKDVFPDEIRAKFGGNILSITMPK------------KASPPEISKPNPDNASEDK 130
           ++ K+ KD   +EIRAKF   +L +TMPK            K + P+   P  D    + 
Sbjct: 73  KETKVAKDCKRNEIRAKFSKGVLYVTMPKTIPIAAGLSVSLKGATPQHQTPKTDEGMRNV 132

Query: 131 LTQSNGNGKPKNFISKLKSPLSRLKFSKATATAMATAVVILAVGVYYLIK 168
              S+       F SK  S   RL   + T      AVV++A  V  ++K
Sbjct: 133 ANCSS------EFYSKFGSLKQRL--WRKTVVEGVAAVVVVAAAVLGVVK 173

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BLAST of CsaV3_1G005060 vs. TAIR10
Match: AT1G07400.1 (HSP20-like chaperones superfamily protein)

HSP 1 Score: 62.8 bits (151), Expect = 2.4e-10
Identity = 31/89 (34.83%), Postives = 54/89 (60.67%), Query Frame = 0


Query: 20  WKKIEDSDVLEVQLPEFKKEELRVRIKNNSILTISGEQLAAKDGKK----------MHFN 79
           WK+  ++ V +  LP  KKEE++V I+++S+L ISGE+   K+ K+            F+
Sbjct: 52  WKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFS 111

Query: 80  RDIKLPKDVFPDEIRAKFGGNILSITMPK 99
           R  KLP++V  D+++A     +L++T+PK
Sbjct: 112 RKFKLPENVKMDQVKASMENGVLTVTVPK 140

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BLAST of CsaV3_1G005060 vs. TAIR10
Match: AT1G59860.1 (HSP20-like chaperones superfamily protein)

HSP 1 Score: 61.2 bits (147), Expect = 6.9e-10
Identity = 31/89 (34.83%), Postives = 55/89 (61.80%), Query Frame = 0


Query: 20  WKKIEDSDVLEVQLPEFKKEELRVRIKNNSILTISGEQLAAKDGKK--MH--------FN 79
           WK+  ++ V +  LP  KKEE++V I+++S+L ISGE+   K+ K+   H        F+
Sbjct: 50  WKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGGFS 109

Query: 80  RDIKLPKDVFPDEIRAKFGGNILSITMPK 99
           R  +LP++V  D+++A     +L++T+PK
Sbjct: 110 RKFRLPENVKMDQVKASMENGVLTVTVPK 138

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BLAST of CsaV3_1G005060 vs. TAIR10
Match: AT2G27140.1 (HSP20-like chaperones superfamily protein)

HSP 1 Score: 59.7 bits (143), Expect = 2.0e-09
Identity = 32/115 (27.83%), Postives = 58/115 (50.43%), Query Frame = 0


Query: 10  LYVKFEPYCQWKKIEDSDVLEVQLPEFKKEELRVRIKNNSILTISGEQLAAKDGKKMHFN 69
           +Y +FEP   WK  +  + L + LP F+KE+L+V++     L + G++ A  + K + F 
Sbjct: 13  IYDEFEPLSNWKTEQGFEALTIYLPGFRKEQLKVQVTTTRKLRVMGDRPAGAN-KWIRFR 72

Query: 70  RDIKLPKDVFPDEIRAKFGGNILSITMPK-------------KASPPEISKPNPD 112
           ++  +P ++  D + AKF G  L + +P+                PP + K NP+
Sbjct: 73  KEFPIPPNIDVDSVSAKFEGANLVVRLPRTEPMGKQPSPIGTATKPPPVPKENPN 126

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BLAST of CsaV3_1G005060 vs. TAIR10
Match: AT5G04890.1 (HSP20-like chaperones superfamily protein)

HSP 1 Score: 59.3 bits (142), Expect = 2.6e-09
Identity = 31/99 (31.31%), Postives = 56/99 (56.57%), Query Frame = 0


Query: 2   EKGEPSDVLYVKFEPYCQWKKIEDSDVLEVQLPEFKKEELRVR-IKNNSILTISGEQLAA 61
           +KG    V Y  F P  +WK   ++ +L + L  F KE+++V  + ++ ++ ++GE+  A
Sbjct: 7   QKGTGFGVQYEDFVPKSEWKDQPEATILNIDLTGFAKEQMKVTYVHSSKMIRVTGERPLA 66

Query: 62  KDGKKMHFNRDIKLPKDVFPDEIRAKFGGNILSITMPKK 100
            + K   FN    +P++   D+I   F  N+L+ITMPK+
Sbjct: 67  -NRKWSRFNEVFTVPQNCLVDKIHGSFKNNVLTITMPKE 104

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BLAST of CsaV3_1G005060 vs. Swiss-Prot
Match: sp|Q9LNW0|HS178_ARATH (17.8 kDa class I heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP17.8 PE=1 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 4.3e-09
Identity = 31/89 (34.83%), Postives = 54/89 (60.67%), Query Frame = 0


Query: 20  WKKIEDSDVLEVQLPEFKKEELRVRIKNNSILTISGEQLAAKDGKK----------MHFN 79
           WK+  ++ V +  LP  KKEE++V I+++S+L ISGE+   K+ K+            F+
Sbjct: 52  WKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFS 111

Query: 80  RDIKLPKDVFPDEIRAKFGGNILSITMPK 99
           R  KLP++V  D+++A     +L++T+PK
Sbjct: 112 RKFKLPENVKMDQVKASMENGVLTVTVPK 140

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BLAST of CsaV3_1G005060 vs. Swiss-Prot
Match: sp|Q9XIE3|HS17A_ARATH (17.6 kDa class I heat shock protein 1 OS=Arabidopsis thaliana OX=3702 GN=HSP17.6A PE=1 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.2e-08
Identity = 31/89 (34.83%), Postives = 55/89 (61.80%), Query Frame = 0


Query: 20  WKKIEDSDVLEVQLPEFKKEELRVRIKNNSILTISGEQLAAKDGKK--MH--------FN 79
           WK+  ++ V +  LP  KKEE++V I+++S+L ISGE+   K+ K+   H        F+
Sbjct: 50  WKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGGFS 109

Query: 80  RDIKLPKDVFPDEIRAKFGGNILSITMPK 99
           R  +LP++V  D+++A     +L++T+PK
Sbjct: 110 RKFRLPENVKMDQVKASMENGVLTVTVPK 138

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BLAST of CsaV3_1G005060 vs. Swiss-Prot
Match: sp|P12810|HS16A_WHEAT (16.9 kDa class I heat shock protein 1 OS=Triticum aestivum OX=4565 GN=hsp16.9A PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.6e-08
Identity = 33/99 (33.33%), Postives = 57/99 (57.58%), Query Frame = 0


Query: 20  WKKIEDSDVLEVQLPEFKKEELRVRIKNNSILTISGEQLAAKDGK--KMH--------FN 79
           WK+  ++ V +V LP  KKEE++V +++ ++L +SGE+   K+ K  K H        F 
Sbjct: 48  WKETPEAHVFKVDLPGVKKEEVKVEVEDGNVLVVSGERSREKEDKNDKWHRVERSSGKFV 107

Query: 80  RDIKLPKDVFPDEIRAKFGGNILSITMPKKASPPEISKP 109
           R  +LP+D   +E++A     +L++T+PK     E+ KP
Sbjct: 108 RRFRLPEDAKVEEVKAGLENGVLTVTVPK----AEVKKP 142

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BLAST of CsaV3_1G005060 vs. Swiss-Prot
Match: sp|P30221|HSP11_SOLLC (17.8 kDa class I heat shock protein OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 2.8e-08
Identity = 33/99 (33.33%), Postives = 56/99 (56.57%), Query Frame = 0


Query: 20  WKKIEDSDVLEVQLPEFKKEELRVRIKNNSILTISGEQLAAKDGK--KMH--------FN 79
           WK+  +  V +V LP  KKEE++V ++ + +L ISGE+   K+ K  K H        F 
Sbjct: 51  WKETPEPHVFKVDLPGLKKEEVKVEVEEDRVLQISGERNVEKEDKNDKWHRMERSSGKFM 110

Query: 80  RDIKLPKDVFPDEIRAKFGGNILSITMPKKASPPEISKP 109
           R  +LP++   D+++A     +L++T+PK+    E+ KP
Sbjct: 111 RRFRLPENAKMDQVKASMENGVLTVTVPKE----EVKKP 145

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BLAST of CsaV3_1G005060 vs. Swiss-Prot
Match: sp|P19244|HSP41_PEA (22.7 kDa class IV heat shock protein OS=Pisum sativum OX=3888 GN=HSP22.7 PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 4.7e-08
Identity = 33/108 (30.56%), Postives = 57/108 (52.78%), Query Frame = 0


Query: 1   MEKGEPSDVLYVKFEPYCQWKKIEDSDVLEVQLPEFKKEELRVRIKNNSILTISGEQLAA 60
           +EK EPS  L         WK+  +  V+ V +P  KK+++++ ++ N +L +SGE+   
Sbjct: 63  VEKHEPSITL---SHARVDWKETPEGHVIMVDVPGLKKDDIKIEVEENRVLRVSGERKKE 122

Query: 61  KDGKKMH----------FNRDIKLPKDVFPDEIRAKFGGNILSITMPK 99
           +D K  H          F R  KLP++V  D ++AK    +L++T+ K
Sbjct: 123 EDKKGDHWHRVERSYGKFWRQFKLPQNVDLDSVKAKMENGVLTLTLHK 167

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BLAST of CsaV3_1G005060 vs. TrEMBL
Match: tr|A0A0A0LT66|A0A0A0LT66_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G031780 PE=3 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 5.0e-87
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MEKGEPSDVLYVKFEPYCQWKKIEDSDVLEVQLPEFKKEELRVRIKNNSILTISGEQLAA 60
           MEKGEPSDVLYVKFEPYCQWKKIEDSDVLEVQLPEFKKEELRVRIKNNSILTISGEQLAA
Sbjct: 1   MEKGEPSDVLYVKFEPYCQWKKIEDSDVLEVQLPEFKKEELRVRIKNNSILTISGEQLAA 60

Query: 61  KDGKKMHFNRDIKLPKDVFPDEIRAKFGGNILSITMPKKASPPEISKPNPDNASEDKLTQ 120
           KDGKKMHFNRDIKLPKDVFPDEIRAKFGGNILSITMPKKASPPEISKPNPDNASEDKLTQ
Sbjct: 61  KDGKKMHFNRDIKLPKDVFPDEIRAKFGGNILSITMPKKASPPEISKPNPDNASEDKLTQ 120

Query: 121 SNGNGKPKNFISKLKSPLSRLKFSKATATAMATAVVILAVGVYYLIKN 169
           SNGNGKPKNFISKLKSPLSRLKFSKATATAMATAVVILAVGVYYLIKN
Sbjct: 121 SNGNGKPKNFISKLKSPLSRLKFSKATATAMATAVVILAVGVYYLIKN 168

[Close]

BLAST of CsaV3_1G005060 vs. TrEMBL
Match: tr|A0A1S3CP71|A0A1S3CP71_CUCME (16.9 kDa class I heat shock protein 1 OS=Cucumis melo OX=3656 GN=LOC103502934 PE=3 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 1.7e-79
Identity = 151/168 (89.88%), Postives = 161/168 (95.83%), Query Frame = 0


Query: 1   MEKGEPSDVLYVKFEPYCQWKKIEDSDVLEVQLPEFKKEELRVRIKNNSILTISGEQLAA 60
           MEKGEPS VLY +FEP+C+WKK+EDSDVLEV LPEFKKEELRVRIKNNSILT+SGE L A
Sbjct: 1   MEKGEPSGVLYEEFEPFCKWKKLEDSDVLEVHLPEFKKEELRVRIKNNSILTLSGEHLTA 60

Query: 61  KDGKKMHFNRDIKLPKDVFPDEIRAKFGGNILSITMPKKASPPEISKPNPDNASEDKLTQ 120
           KDGKKMHFNR+IKLPKD++PDEIRAKFGGN+LSITMPKKASPPEISKPNPDNASEDKLTQ
Sbjct: 61  KDGKKMHFNREIKLPKDIYPDEIRAKFGGNVLSITMPKKASPPEISKPNPDNASEDKLTQ 120

Query: 121 SNGNGKPKNFISKLKSPLSRLKFSKATATAMATAVVILAVGVYYLIKN 169
           SNGNGKPKNFIS+LKSPLSRLKFSK TATAMA AVVILAVGVYYLIKN
Sbjct: 121 SNGNGKPKNFISRLKSPLSRLKFSKETATAMAVAVVILAVGVYYLIKN 168

[Close]

BLAST of CsaV3_1G005060 vs. TrEMBL
Match: tr|A0A2N9GUM3|A0A2N9GUM3_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS30943 PE=3 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 8.4e-18
Identity = 47/98 (47.96%), Postives = 67/98 (68.37%), Query Frame = 0


Query: 2   EKGEPSDVLYVKFEPYCQWKKIEDSDVLEVQLPEFKKEELRVRIKNNSILTISGEQLAAK 61
           + G P   +Y  FEPYC+W+  E+ D LE+QL +FKKE+L+V+I N  +L ISGE+  ++
Sbjct: 4   KNGAPVKRIYEDFEPYCKWRVEEERDTLELQLQDFKKEQLKVQINNLGVLRISGERATSE 63

Query: 62  DGKKMHFNRDIKLPKDVFPDEIRAKFGGNILSITMPKK 100
           D K   FN++IK+ K+     I+AKFG   L+ITMPKK
Sbjct: 64  DIKWSRFNKEIKVAKNCETSAIQAKFGNGTLTITMPKK 101

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BLAST of CsaV3_1G005060 vs. TrEMBL
Match: tr|W9QEJ7|W9QEJ7_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_014720 PE=3 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 2.7e-16
Identity = 45/87 (51.72%), Postives = 63/87 (72.41%), Query Frame = 0


Query: 13  KFEPYCQWKKIEDSDVLEVQLPEFKKEELRVRIKNNSILTISGEQLAAKDGKKMHFNRDI 72
           +FEP+CQW++ ++ D+LEV L  FK+E LRV++ N  ILTISGEQ + +D K   F ++I
Sbjct: 4   EFEPFCQWRRGQERDILEVHLKGFKREHLRVQMNNGHILTISGEQ-SVEDYKIRRFRKEI 63

Query: 73  KLPKDVFPDEIRAKFGGNILSITMPKK 100
           K+ KD  PD+IRAKF   IL IT+P +
Sbjct: 64  KVSKDCTPDQIRAKFASGILYITLPMR 89

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BLAST of CsaV3_1G005060 vs. TrEMBL
Match: tr|A0A2C9VAP3|A0A2C9VAP3_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_09G138800 PE=3 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 6.0e-16
Identity = 45/103 (43.69%), Postives = 68/103 (66.02%), Query Frame = 0


Query: 10  LYVKFEPYCQWKKIEDSDVLEVQLPEFKKEELRVRIKNNSILTISGEQLAAKDGKKMHFN 69
           ++  FEPYC+W+K ++ DVLEV L  FKK++L++++ N  ++TI+GE+   +  K+  F 
Sbjct: 6   VFEDFEPYCKWQKDQERDVLEVHLNGFKKDQLKIQLSNLGVMTITGER-PLEGSKRSRFR 65

Query: 70  RDIKLPKDVFPDEIRAKFGGNILSITMPKKA--SPPEISKPNP 111
           ++++L KD   DEIRAK  G ILSI MPKK   +PP      P
Sbjct: 66  KELRLSKDYVTDEIRAKMSGGILSIIMPKKTELTPPSFRDNKP 107

The following BLAST results are available for this feature:

BLAST of CsaV3_1G005060 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004137386.1	7.5e-87	100.00	PREDICTED: 18.1 kDa class I heat shock protein [Cucumis sativus] >KGN63957.1 hyp...	[more]
XP_008465577.1	2.6e-79	89.88	PREDICTED: 16.9 kDa class I heat shock protein 1 [Cucumis melo]	[more]
XP_023001660.1	1.9e-58	71.18	17.8 kDa class I heat shock protein-like [Cucurbita maxima]	[more]
XP_023520341.1	7.3e-58	72.94	17.8 kDa class I heat shock protein-like [Cucurbita pepo subsp. pepo]	[more]
XP_022923784.1	1.3e-57	72.94	17.8 kDa class I heat shock protein-like [Cucurbita moschata]	[more]

BLAST of CsaV3_1G005060 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G54400.1	4.2e-15	32.94	HSP20-like chaperones superfamily protein	[more]
AT1G07400.1	2.4e-10	34.83	HSP20-like chaperones superfamily protein	[more]
AT1G59860.1	6.9e-10	34.83	HSP20-like chaperones superfamily protein	[more]
AT2G27140.1	2.0e-09	27.83	HSP20-like chaperones superfamily protein	[more]
AT5G04890.1	2.6e-09	31.31	HSP20-like chaperones superfamily protein	[more]

BLAST of CsaV3_1G005060 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LNW0\|HS178_ARATH	4.3e-09	34.83	17.8 kDa class I heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP17.8 P...	[more]
sp\|Q9XIE3\|HS17A_ARATH	1.2e-08	34.83	17.6 kDa class I heat shock protein 1 OS=Arabidopsis thaliana OX=3702 GN=HSP17.6...	[more]
sp\|P12810\|HS16A_WHEAT	1.6e-08	33.33	16.9 kDa class I heat shock protein 1 OS=Triticum aestivum OX=4565 GN=hsp16.9A P...	[more]
sp\|P30221\|HSP11_SOLLC	2.8e-08	33.33	17.8 kDa class I heat shock protein OS=Solanum lycopersicum OX=4081 PE=2 SV=1	[more]
sp\|P19244\|HSP41_PEA	4.7e-08	30.56	22.7 kDa class IV heat shock protein OS=Pisum sativum OX=3888 GN=HSP22.7 PE=2 SV...	[more]

BLAST of CsaV3_1G005060 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LT66\|A0A0A0LT66_CUCSA	5.0e-87	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G031780 PE=3 SV=1	[more]
tr\|A0A1S3CP71\|A0A1S3CP71_CUCME	1.7e-79	89.88	16.9 kDa class I heat shock protein 1 OS=Cucumis melo OX=3656 GN=LOC103502934 PE...	[more]
tr\|A0A2N9GUM3\|A0A2N9GUM3_FAGSY	8.4e-18	47.96	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS30943 PE=3 SV=1	[more]
tr\|W9QEJ7\|W9QEJ7_9ROSA	2.7e-16	51.72	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_014720 PE=3 SV=1	[more]
tr\|A0A2C9VAP3\|A0A2C9VAP3_MANES	6.0e-16	43.69	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_09G138800 PE=3 SV=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008978	HSP20-like_chaperone
IPR002068	A-crystallin/Hsp20_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G005060.1	CsaV3_1G005060.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 21..104 e-value: 2.9E-11 score: 43.3
IPR002068	Alpha crystallin/Hsp20 domain	PROSITE	PS01031	SHSP	coord: 8..114 score: 17.686
IPR008978	HSP20-like chaperone	GENE3D	G3DSA:2.60.40.790		coord: 4..107 e-value: 1.3E-18 score: 69.1
IPR008978	HSP20-like chaperone	SUPERFAMILY	SSF49764	HSP20-like chaperones	coord: 9..101
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 94..131
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 112..129
None	No IPR available	PANTHER	PTHR43670	FAMILY NOT NAMED	coord: 6..110
None	No IPR available	PANTHER	PTHR43670:SF16	ALPHA-CRYSTALLIN DOMAIN OF HEAT SHOCK PROTEIN-CONTAINING PROTEIN	coord: 6..110
None	No IPR available	CDD	cd06464	ACD_sHsps-like	coord: 24..98 e-value: 2.36596E-15 score: 66.8088

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_1G005060	CSPI01G05160	Wild cucumber (PI 183967)	cpicucB001
CsaV3_1G005060	Cucsa.112350	Cucumber (Gy14) v1	cgycucB143
CsaV3_1G005060	CmaCh13G011000	Cucurbita maxima (Rimu)	cmacucB0237
CsaV3_1G005060	CmaCh01G007570	Cucurbita maxima (Rimu)	cmacucB0513
CsaV3_1G005060	CmoCh01G007920	Cucurbita moschata (Rifu)	cmocucB0501
CsaV3_1G005060	Cp4.1LG02g09900	Cucurbita pepo (Zucchini)	cpecucB0665
CsaV3_1G005060	Carg04737	Silver-seed gourd	carcucB0420
CsaV3_1G005060	Carg06982	Silver-seed gourd	carcucB0555
CsaV3_1G005060	Cla018648	Watermelon (97103) v1	cucwmB070
CsaV3_1G005060	MELO3C001943	Melon (DHL92) v3.5.1	cucmeB024
CsaV3_1G005060	ClCG04G012640	Watermelon (Charleston Gray)	cucwcgB063
CsaV3_1G005060	Lsi02G000290	Bottle gourd (USVL1VR-Ls)	cuclsiB022
CsaV3_1G005060	MELO3C001943.2	Melon (DHL92) v3.6.1	cucmedB022
CsaV3_1G005060	Cla97C04G079640	Watermelon (97103) v2	cucwmbB054
CsaV3_1G005060	Bhi08G001610	Wax gourd	cucwgoB036

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_1G005060	Cucumber (Gy14) v2	cgybcucB002
CsaV3_1G005060	Cucurbita moschata (Rifu)	cmocucB0224
CsaV3_1G005060	Cucurbita pepo (Zucchini)	cpecucB0636