Lsi11G012440 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi11G012440
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionChloroplast signal recognition particle component
Locationchr11 : 21077728 .. 21078825 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACGCCGTCTTCGTTAACCAGTCTCTCTCTCGCCTTAAACTTTCCCCTAAGCCCCCTCTCCCATTCCCTCCTTCCTCCTCTCGAATCCCCCATCTCAATCTCCGCCGTAACCTCAAACATTTCACTCCCTACGCCGTTCAAAGCGATCAACCCCTCACACAACAGACCCAGAAATCAGAAGACGATGGATCGTACGGCGAAGTCGATGGAATCATCGGCAGCCGTGCTCTGTCCGACGCTACCGGAATGGAGTATCTAATTAAATGGAAAGATGGGCATTCTCCATCATGGGTTCCTTCCGATTTCATCGCTAAAGATGTTGTCGCCGAGTACGAAACTCCTTGGTGGACCGCCGCCAAGAAAGCCGACGAATCTGCTCTGAAATCGCTTATAGATTCTGCCGACGGACGCGATGTCGACGCTGTGGATGAAGATGGGAGAACCGCTCTTCTGTTCGTTGCTGGACTTGGGTCTGATCCGTGTGTGAGAATGTTAGCGGAAGCCGGCGCGAATCTCGACCACCGTGATAACAGCGGCGGGTTTACAGCGTTGCATATGGCAGCTGGGTATGTGAAACCAGAGACGGTGGAGTTGTTAGTGGAATTGGGGGCGGATCCAGAAATTGAAGACGAAAAGGGTCGGACGCCATTGGTGTTGGCAAGGGAGATATTGAAAGCGACGCCAAGGGTTCAGTTTATGAGGAGATTGGGGTTGGAGAGAGTGATCGGAGCGGTGGAGAGAGTGGTTTATGAGTATGCAGAGGTGGAGGCATTGCTGGAGAAGAGAGGGAAGGGGGAGAATTTGGAGTATTTGGTGAAATGGAAAGACGGAGAGGATAATGAATGGGTGAAAGTGGGGTTGATTGCGGAGGATTTGGTGGCGGATTTTGAAGCAGGGTTGGAGTATGCGGTGGCGGAGGCGGTGGTCGGAAAAAGAGTTGGAGATGATGGGAAGATGGAGTATCTTGTTAAATGGACGGATATACAAGATGCCACGTGGGAGCCTCAGGCTAATGTGGATCCTGATTTGGTTAACGAGTATGAGAAGGCCCAGGCCCAACCCCAGGCCCAATCCAGTAATGGTAGTGCCCTTTGA

mRNA sequence

ATGGACGCCGTCTTCGTTAACCAGTCTCTCTCTCGCCTTAAACTTTCCCCTAAGCCCCCTCTCCCATTCCCTCCTTCCTCCTCTCGAATCCCCCATCTCAATCTCCGCCGTAACCTCAAACATTTCACTCCCTACGCCGTTCAAAGCGATCAACCCCTCACACAACAGACCCAGAAATCAGAAGACGATGGATCGTACGGCGAAGTCGATGGAATCATCGGCAGCCGTGCTCTGTCCGACGCTACCGGAATGGAGTATCTAATTAAATGGAAAGATGGGCATTCTCCATCATGGGTTCCTTCCGATTTCATCGCTAAAGATGTTGTCGCCGAGTACGAAACTCCTTGGTGGACCGCCGCCAAGAAAGCCGACGAATCTGCTCTGAAATCGCTTATAGATTCTGCCGACGGACGCGATGTCGACGCTGTGGATGAAGATGGGAGAACCGCTCTTCTGTTCGTTGCTGGACTTGGGTCTGATCCGTGTGTGAGAATGTTAGCGGAAGCCGGCGCGAATCTCGACCACCGTGATAACAGCGGCGGGTTTACAGCGTTGCATATGGCAGCTGGGTATGTGAAACCAGAGACGGTGGAGTTGTTAGTGGAATTGGGGGCGGATCCAGAAATTGAAGACGAAAAGGGTCGGACGCCATTGGTGTTGGCAAGGGAGATATTGAAAGCGACGCCAAGGGTTCAGTTTATGAGGAGATTGGGGTTGGAGAGAGTGATCGGAGCGGTGGAGAGAGTGGTTTATGAGTATGCAGAGGTGGAGGCATTGCTGGAGAAGAGAGGGAAGGGGGAGAATTTGGAGTATTTGGTGAAATGGAAAGACGGAGAGGATAATGAATGGGTGAAAGTGGGGTTGATTGCGGAGGATTTGGTGGCGGATTTTGAAGCAGGGTTGGAGTATGCGGTGGCGGAGGCGGTGGTCGGAAAAAGAGTTGGAGATGATGGGAAGATGGAGTATCTTGTTAAATGGACGGATATACAAGATGCCACGTGGGAGCCTCAGGCTAATGTGGATCCTGATTTGGTTAACGAGTATGAGAAGGCCCAGGCCCAACCCCAGGCCCAATCCAGTAATGGTAGTGCCCTTTGA

Coding sequence (CDS)

ATGGACGCCGTCTTCGTTAACCAGTCTCTCTCTCGCCTTAAACTTTCCCCTAAGCCCCCTCTCCCATTCCCTCCTTCCTCCTCTCGAATCCCCCATCTCAATCTCCGCCGTAACCTCAAACATTTCACTCCCTACGCCGTTCAAAGCGATCAACCCCTCACACAACAGACCCAGAAATCAGAAGACGATGGATCGTACGGCGAAGTCGATGGAATCATCGGCAGCCGTGCTCTGTCCGACGCTACCGGAATGGAGTATCTAATTAAATGGAAAGATGGGCATTCTCCATCATGGGTTCCTTCCGATTTCATCGCTAAAGATGTTGTCGCCGAGTACGAAACTCCTTGGTGGACCGCCGCCAAGAAAGCCGACGAATCTGCTCTGAAATCGCTTATAGATTCTGCCGACGGACGCGATGTCGACGCTGTGGATGAAGATGGGAGAACCGCTCTTCTGTTCGTTGCTGGACTTGGGTCTGATCCGTGTGTGAGAATGTTAGCGGAAGCCGGCGCGAATCTCGACCACCGTGATAACAGCGGCGGGTTTACAGCGTTGCATATGGCAGCTGGGTATGTGAAACCAGAGACGGTGGAGTTGTTAGTGGAATTGGGGGCGGATCCAGAAATTGAAGACGAAAAGGGTCGGACGCCATTGGTGTTGGCAAGGGAGATATTGAAAGCGACGCCAAGGGTTCAGTTTATGAGGAGATTGGGGTTGGAGAGAGTGATCGGAGCGGTGGAGAGAGTGGTTTATGAGTATGCAGAGGTGGAGGCATTGCTGGAGAAGAGAGGGAAGGGGGAGAATTTGGAGTATTTGGTGAAATGGAAAGACGGAGAGGATAATGAATGGGTGAAAGTGGGGTTGATTGCGGAGGATTTGGTGGCGGATTTTGAAGCAGGGTTGGAGTATGCGGTGGCGGAGGCGGTGGTCGGAAAAAGAGTTGGAGATGATGGGAAGATGGAGTATCTTGTTAAATGGACGGATATACAAGATGCCACGTGGGAGCCTCAGGCTAATGTGGATCCTGATTTGGTTAACGAGTATGAGAAGGCCCAGGCCCAACCCCAGGCCCAATCCAGTAATGGTAGTGCCCTTTGA

Protein sequence

MDAVFVNQSLSRLKLSPKPPLPFPPSSSRIPHLNLRRNLKHFTPYAVQSDQPLTQQTQKSEDDGSYGEVDGIIGSRALSDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDSADGRDVDAVDEDGRTALLFVAGLGSDPCVRMLAEAGANLDHRDNSGGFTALHMAAGYVKPETVELLVELGADPEIEDEKGRTPLVLAREILKATPRVQFMRRLGLERVIGAVERVVYEYAEVEALLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVADFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPQANVDPDLVNEYEKAQAQPQAQSSNGSAL
BLAST of Lsi11G012440 vs. Swiss-Prot
Match: SR43C_ARATH (Signal recognition particle 43 kDa protein, chloroplastic OS=Arabidopsis thaliana GN=CAO PE=1 SV=2)

HSP 1 Score: 412.9 bits (1060), Expect = 3.6e-114
Identity = 225/362 (62.15%), Postives = 273/362 (75.41%), Query Frame = 1

Query: 3   AVFVNQSLSRLKLSPKPPLPFPPSSSRIPHLNLRRNLKHFTPY---AVQSD-QPLTQQTQ 62
           A+ ++QSLSR+KLSP        S+     L +RR    F      AVQ + +  T   +
Sbjct: 12  ALVIHQSLSRIKLSPPKSSSSSSSAFSPESLPIRRIELCFRGAICAAVQRNYEETTSSVE 71

Query: 63  KSEDD----GSYGEVDGIIGSRALSDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYET 122
           ++E+D     SYGEV+ IIGSR   +   MEYLI+WKDGHSPSWVPS +IA DVV+EYET
Sbjct: 72  EAEEDDESSSSYGEVNKIIGSRTAGEGA-MEYLIEWKDGHSPSWVPSSYIAADVVSEYET 131

Query: 123 PWWTAAKKADESALKSLIDSADGRDVDAVDEDGRTALLFVAGLGSDPCVRMLAEAGANLD 182
           PWWTAA+KADE AL  L++    RDVDAVDE+GRTALLFVAGLGSD CVR+LAEAGA+LD
Sbjct: 132 PWWTAARKADEQALSQLLED---RDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLD 191

Query: 183 HRDNSGGFTALHMAAGYVKPETVELLVELGADPEIEDEKGRTPLVLAREILKATPR---V 242
           HRD  GG TALHMAAGYV+PE VE LVELGAD E+EDE+G T L LAREILK TP+   +
Sbjct: 192 HRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPM 251

Query: 243 QFMRRLGLERVIGAVERVVYEYAEVEALLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAE 302
           QF RR+GLE+VI  +E  V+EYAEV+ ++EKRGKG+++EYLV+WKDG D EWVK   +AE
Sbjct: 252 QFGRRIGLEKVINVLEGQVFEYAEVDEIVEKRGKGKDVEYLVRWKDGGDCEWVKGVHVAE 311

Query: 303 DLVADFEAGLEYAVAEAVVGKRVGDDGK-MEYLVKWTDIQDATWEPQANVDPDLVNEYEK 353
           D+  D+E GLEYAVAE+V+GKRVGDDGK +EYLVKWTD+ DATWEPQ NVD  LV  Y++
Sbjct: 312 DVAKDYEDGLEYAVAESVIGKRVGDDGKTIEYLVKWTDMSDATWEPQDNVDSTLVLLYQQ 369

BLAST of Lsi11G012440 vs. Swiss-Prot
Match: SR43C_ORYSJ (Probable signal recognition particle 43 kDa protein, chloroplastic OS=Oryza sativa subsp. japonica GN=Os03g0131900 PE=2 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 8.6e-92
Identity = 187/373 (50.13%), Postives = 243/373 (65.15%), Query Frame = 1

Query: 1   MDAVFVNQSLSRLKLSPKPPLPFPPSSSRIPHLNLRRNLKHFTPYAVQSDQ--PLTQQTQ 60
           M+AV  + SLSRLK  P P     P+ S      LR   +  T  AV  DQ  P    ++
Sbjct: 1   MEAVLRHPSLSRLK-PPNPNAQRTPALSITVPFRLRLPNRRLTAAAVFQDQTNPRNPASK 60

Query: 61  KSEDDGSYGEVDGIIGSRALSD-----------ATGMEYLIKWKDGHSPSWVPSDFIAKD 120
             +DD +YGEVD I+ SR + +            T  EYL++WKDGH PSW+P++ IA D
Sbjct: 61  GGDDDEAYGEVDRIVSSRTIKNPVFAEDGSATTVTATEYLVEWKDGHEPSWIPAEAIAAD 120

Query: 121 VVAEYETPWWTAAKKADESALKSLI-DSADGRDVDAVDEDGRTALLFVAGLGSDPCVRML 180
           VVAEYETPWWTAAKKAD + + +L+ D    RD DA D  GRTA+ F AGLGS+ CVR L
Sbjct: 121 VVAEYETPWWTAAKKADAAEITALLADETLRRDPDAEDAQGRTAMHFAAGLGSEECVRAL 180

Query: 181 AEAGANLDHRDNSGG-FTALHMAAGYVKPETVELLVELGADPEIEDEKGRTPLVLAREIL 240
           AEAGA++   + +GG  T LH+A GY +P  V  L+ELGA+PE  D +GRTPL L +++L
Sbjct: 181 AEAGADVGRPERAGGGLTPLHIAVGYGRPAAVRALLELGAEPEAPDGQGRTPLELVQDVL 240

Query: 241 KATPR---VQFMRRLGLERVIGAVERVVYEYAEVEALLEKRGKGENLEYLVKWKDGEDNE 300
             TP+     F RRL LE     +E+ VYE+ EVE +++ RG+G+  EYLV+W+DG D E
Sbjct: 241 AKTPKGNPATFERRLALEAAAKELEKAVYEWGEVEKVVDGRGEGKWREYLVEWRDGGDRE 300

Query: 301 WVKVGLIAEDLVADFEAGLEYAVAEAVVGKR--VGDDGKMEYLVKWTDIQDATWEPQANV 354
           WV+   +AEDLV DF+AGLEYAVAEAVV KR     +GK EYLVKW DI++ATWEP  NV
Sbjct: 301 WVRAAWVAEDLVKDFDAGLEYAVAEAVVNKREAAEGEGKWEYLVKWVDIEEATWEPAENV 360

BLAST of Lsi11G012440 vs. Swiss-Prot
Match: ANKH_ALLVD (Ankyrin homolog OS=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / NCIMB 10441 / D) GN=Alvin_1094 PE=3 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 2.4e-09
Identity = 50/127 (39.37%), Postives = 63/127 (49.61%), Query Frame = 1

Query: 111 EYETPWWTAAKKADESALKSLIDSADGRDVDAVDEDGRTALLFVAGLGSDPCVRMLAEAG 170
           E  T    AA K +   L  LI+   G D++A D+ G TALL  A  G    V  LA  G
Sbjct: 163 EGRTALMQAASKGETGVLPLLIEG--GADLEARDKQGATALLIAADQGQAGAVETLAGLG 222

Query: 171 ANLDHRDNSGGFTALHMAAGYVKPETVELLVELGADPEIEDEKGRTPLVLAREILKATPR 230
           A LD  D  G  TAL +A G+     VE L+ +GADP  +D KG T L+ A     AT  
Sbjct: 223 AQLDAVDALGS-TALILAVGHGHVAMVERLLAMGADPNRQDRKGTTALMEA----VATDH 282

Query: 231 VQFMRRL 238
            + + RL
Sbjct: 283 AELIDRL 282

BLAST of Lsi11G012440 vs. Swiss-Prot
Match: HECD1_MOUSE (E3 ubiquitin-protein ligase HECTD1 OS=Mus musculus GN=Hectd1 PE=1 SV=2)

HSP 1 Score: 63.9 bits (154), Expect = 4.1e-09
Identity = 35/103 (33.98%), Postives = 59/103 (57.28%), Query Frame = 1

Query: 121 KKADESALKSLIDSADGRDVDAVDEDGRTALLFVAGLGSDPCVRMLAEAGANLDHRDNSG 180
           +  D  AL   ID+    +V+ +D+ G+T L + +  G+   V  L E GA+++    S 
Sbjct: 371 RSKDTDALIDAIDTGAAFEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNRGQRS- 430

Query: 181 GFTALHMAAGYVKPETVELLVELGADPEIEDEKGRTPLVLARE 224
             ++LH AA + +P+  + L+  GA+P++ DE G+TPL  ARE
Sbjct: 431 --SSLHYAACFGRPQVAKTLLRHGANPDLRDEDGKTPLDKARE 470

BLAST of Lsi11G012440 vs. Swiss-Prot
Match: AKR2A_ARATH (Ankyrin repeat domain-containing protein 2A OS=Arabidopsis thaliana GN=AKR2A PE=1 SV=2)

HSP 1 Score: 63.5 bits (153), Expect = 5.4e-09
Identity = 42/120 (35.00%), Postives = 66/120 (55.00%), Query Frame = 1

Query: 120 AKKADESALKSLIDSADGRDVDAVDEDGRTALLFVAGLGSDPCVRMLAEAGANLDHRDNS 179
           A   D   LK+ +  A G + D  D +GRTAL F  G G   C ++L +AGA+++  D +
Sbjct: 226 ASLGDVEGLKAAL--ASGGNKDEEDSEGRTALHFACGYGELKCAQVLIDAGASVNAVDKN 285

Query: 180 GGFTALHMAAGYVKPETVELLVELGADPEIEDEKGRTPLVLAR-----EILKATPRVQFM 235
              T LH AAGY + E V LL+E GA   +++   +TP+ +A+     E++K   +  F+
Sbjct: 286 KN-TPLHYAAGYGRKECVSLLLENGAAVTLQNLDEKTPIDVAKLNSQLEVVKLLEKDAFL 342

BLAST of Lsi11G012440 vs. TrEMBL
Match: A0A0A0K634_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G018780 PE=4 SV=1)

HSP 1 Score: 625.5 bits (1612), Expect = 3.9e-176
Identity = 315/354 (88.98%), Postives = 329/354 (92.94%), Query Frame = 1

Query: 1   MDAVFVNQSLSRLKLSPKPPLPFPPSSSRIPHLNLRRNLKHFTPYAVQSDQPLTQQTQKS 60
           M+AVF+NQSLSRLKL PK PLPFP   S IPHLNLRRN  HFT YAVQSDQP+TQQTQK 
Sbjct: 1   MEAVFLNQSLSRLKLPPKTPLPFP---SPIPHLNLRRNFTHFTAYAVQSDQPITQQTQKP 60

Query: 61  EDDGSYGEVDGIIGSRALSDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTAA 120
           EDD SYGEVDGIIGSRAL DATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTAA
Sbjct: 61  EDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTAA 120

Query: 121 KKADESALKSLIDSADGRDVDAVDEDGRTALLFVAGLGSDPCVRMLAEAGANLDHRDNSG 180
           KKADESALKSLIDS D RD DAVDEDGRTALLFV+GLGS  CVR+LA+AG NL+HRDNSG
Sbjct: 121 KKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDNSG 180

Query: 181 GFTALHMAAGYVKPETVELLVELGADPEIEDEKGRTPLVLAREILKATPRVQFMRRLGLE 240
           GFTALHMAAGYVKPETVELLVELGADPEI+DEKGRT L LA+EILKATPRVQFMRRLGLE
Sbjct: 181 GFTALHMAAGYVKPETVELLVELGADPEIDDEKGRTALELAKEILKATPRVQFMRRLGLE 240

Query: 241 RVIGAVERVVYEYAEVEALLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVADFEAG 300
           +VI AVE+VVYEYAEVE LLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLV D+EAG
Sbjct: 241 KVIRAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVGDYEAG 300

Query: 301 LEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPQANVDPDLVNEYEKAQAQ 355
           LEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEP  NVDPDL+NE+EKAQAQ
Sbjct: 301 LEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQ 351

BLAST of Lsi11G012440 vs. TrEMBL
Match: V4SA78_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10028628mg PE=4 SV=1)

HSP 1 Score: 476.9 bits (1226), Expect = 2.3e-131
Identity = 235/358 (65.64%), Postives = 287/358 (80.17%), Query Frame = 1

Query: 2   DAVFVNQSLSRLKLSPKPPLPFPPSSSRIPHLNLRR---NLKHFTPYAVQSDQPLTQQTQ 61
           D++ +NQSL+RLKL PK     PP +S+  H+   +    L     +A+Q+ Q     T 
Sbjct: 3   DSLLLNQSLARLKLLPK----IPPPASQFLHIKPPQPHGKLHSTASFAIQNQQQTQYGTT 62

Query: 62  KSEDDGSYGEVDGIIGSRALSDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWT 121
              DD SYGEV  IIGSRAL DATGMEYLI+WKDGH+PSWVP D+IAKDVVAEYE+PWWT
Sbjct: 63  DQNDDESYGEVSKIIGSRALEDATGMEYLIEWKDGHAPSWVPQDYIAKDVVAEYESPWWT 122

Query: 122 AAKKADESALKSLIDSADGRDVDAVDEDGRTALLFVAGLGSDPCVRMLAEAGANLDHRDN 181
           AAKKAD++ALK +I++ DGRDVDAVD DGRTALLFV+GLGS+ CVR+LAEAG +L+HRD+
Sbjct: 123 AAKKADDAALKEIIEAGDGRDVDAVDNDGRTALLFVSGLGSEACVRVLAEAGTDLNHRDS 182

Query: 182 SGGFTALHMAAGYVKPETVELLVELGADPEIEDEKGRTPLVLAREILKATPR---VQFMR 241
            GG TALHMAAGYVKP   +LL+ELGAD ++ED++G TPL LA+EIL+ TP+   +QF R
Sbjct: 183 GGGLTALHMAAGYVKPGVAKLLLELGADADVEDDRGLTPLALAKEILRVTPKGNPMQFAR 242

Query: 242 RLGLERVIGAVERVVYEYAEVEALLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVA 301
           RLGLE VI  +E  V+EYAEV+ +LEKRGKG+ LEYLVKW+DG DNEWVKVG IAEDLV 
Sbjct: 243 RLGLEAVIRNLEEAVFEYAEVQEILEKRGKGDQLEYLVKWRDGGDNEWVKVGFIAEDLVT 302

Query: 302 DFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPQANVDPDLVNEYEKAQA 354
           D+EAGLEYAVAE V+GKR+GDDGK E+LVKWTDI +ATWEP+ NVDPDL+ E+E +Q+
Sbjct: 303 DYEAGLEYAVAEGVLGKRMGDDGKREFLVKWTDIDEATWEPEENVDPDLIKEFEDSQS 356

BLAST of Lsi11G012440 vs. TrEMBL
Match: A0A067FLG7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g016433mg PE=4 SV=1)

HSP 1 Score: 476.9 bits (1226), Expect = 2.3e-131
Identity = 235/358 (65.64%), Postives = 287/358 (80.17%), Query Frame = 1

Query: 2   DAVFVNQSLSRLKLSPKPPLPFPPSSSRIPHLNLRR---NLKHFTPYAVQSDQPLTQQTQ 61
           D++ +NQSL+RLKL PK     PP +S+  H+   +    L     +A+Q+ Q     T 
Sbjct: 3   DSLLLNQSLARLKLLPK----IPPPASQFLHIKPPQPHGKLHSTASFAIQNQQQTQYGTT 62

Query: 62  KSEDDGSYGEVDGIIGSRALSDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWT 121
              DD SYGEV  IIGSRAL DATGMEYLI+WKDGH+PSWVP D+IAKDVVAEYE+PWWT
Sbjct: 63  DQNDDESYGEVSKIIGSRALEDATGMEYLIEWKDGHAPSWVPQDYIAKDVVAEYESPWWT 122

Query: 122 AAKKADESALKSLIDSADGRDVDAVDEDGRTALLFVAGLGSDPCVRMLAEAGANLDHRDN 181
           AAKKAD++ALK +I++ DGRDVDAVD DGRTALLFV+GLGS+ CVR+LAEAG +L+HRD+
Sbjct: 123 AAKKADDAALKEIIEAGDGRDVDAVDNDGRTALLFVSGLGSEACVRVLAEAGTDLNHRDS 182

Query: 182 SGGFTALHMAAGYVKPETVELLVELGADPEIEDEKGRTPLVLAREILKATPR---VQFMR 241
            GG TALHMAAGYVKP   +LL+ELGAD ++ED++G TPL LA+EIL+ TP+   +QF R
Sbjct: 183 GGGLTALHMAAGYVKPGVAKLLLELGADADVEDDRGLTPLALAKEILRVTPKGNPMQFAR 242

Query: 242 RLGLERVIGAVERVVYEYAEVEALLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVA 301
           RLGLE VI  +E  V+EYAEV+ +LEKRGKG+ LEYLVKW+DG DNEWVKVG IAEDLV 
Sbjct: 243 RLGLEAVIRNLEEAVFEYAEVQEILEKRGKGDQLEYLVKWRDGGDNEWVKVGFIAEDLVT 302

Query: 302 DFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPQANVDPDLVNEYEKAQA 354
           D+EAGLEYAVAE V+GKR+GDDGK E+LVKWTDI +ATWEP+ NVDPDL+ E+E +Q+
Sbjct: 303 DYEAGLEYAVAEGVLGKRMGDDGKREFLVKWTDIDEATWEPEENVDPDLIKEFEDSQS 356

BLAST of Lsi11G012440 vs. TrEMBL
Match: B9HR05_POPTR (Chaos family protein OS=Populus trichocarpa GN=POPTR_0009s14260g PE=4 SV=2)

HSP 1 Score: 474.6 bits (1220), Expect = 1.1e-130
Identity = 244/364 (67.03%), Postives = 286/364 (78.57%), Query Frame = 1

Query: 1   MDAVFVNQSLSRLKLSPKPPLPFPPSSSRIPHLNL---RRNLKHFTPYAVQSDQ----PL 60
           MD++FVNQ+LSRLKLSPK  +P   S     HL     R+    FT +A+Q  Q    PL
Sbjct: 1   MDSLFVNQALSRLKLSPKLTIPSYFSYQSPLHLKQNHGRKPYNSFTLFAIQDQQETQNPL 60

Query: 61  TQQTQKSEDDGSYGEVDGIIGSRALSDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYE 120
            + TQ  EDD SYGEV  IIGSRA+    GMEY I+WKDGH+PSWVPSDFIAKDVVAEYE
Sbjct: 61  QETTQNIEDDESYGEVSKIIGSRAVEGGKGMEYFIEWKDGHTPSWVPSDFIAKDVVAEYE 120

Query: 121 TPWWTAAKKADESALKSLIDSADG--RDVDAVDEDGRTALLFVAGLGSDPCVRMLAEAGA 180
           TPWWTAAKKAD SAL  ++   +   RDV+AVD DGRTALLFV+GLGS+PCV++LAEAGA
Sbjct: 121 TPWWTAAKKADSSALSQILSENEDERRDVNAVDSDGRTALLFVSGLGSEPCVKLLAEAGA 180

Query: 181 NLDHRDNSGGFTALHMAAGYVKPETVELLVELGADPEIEDEKGRTPLVLAREILKATPR- 240
            LDHRDNSGG TALHMAAGYVKP  V+LLV+LGADPE++D++G TPL LA+EIL+ TP+ 
Sbjct: 181 ELDHRDNSGGLTALHMAAGYVKPGVVKLLVDLGADPEVKDDRGLTPLDLAKEILRVTPKG 240

Query: 241 --VQFMRRLGLERVIGAVERVVYEYAEVEALLEKRGKGENLEYLVKWKDGEDNEWVKVGL 300
             +QF RRLGLE VI  +E  ++EYAEV+ +LEKRGKG++LEYLVKWKDG DNEWVK   
Sbjct: 241 NPMQFGRRLGLESVIRNLEEGIFEYAEVQEILEKRGKGKDLEYLVKWKDGSDNEWVKAKF 300

Query: 301 IAEDLVADFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPQANVDPDLVNEY 353
           I EDLV DFEAGLEYAVAE VVGKR+GDDGK EYLVKWTDI +ATWEP+ NVD DL+ E+
Sbjct: 301 IGEDLVMDFEAGLEYAVAEGVVGKRLGDDGKNEYLVKWTDIDEATWEPEENVDLDLIKEF 360

BLAST of Lsi11G012440 vs. TrEMBL
Match: B9RF69_RICCO (Ankyrin repeat domain protein, putative OS=Ricinus communis GN=RCOM_1431980 PE=4 SV=1)

HSP 1 Score: 471.9 bits (1213), Expect = 7.3e-130
Identity = 234/366 (63.93%), Postives = 284/366 (77.60%), Query Frame = 1

Query: 1   MDAVFVNQSLSRLKLSPKPPLPFP-PSSSRIPHLNLRRNLKHFTPYAVQSDQPLTQQTQK 60
           MD +FVN+ LSRLKLSP   +P   PS      L  +     FT +A+Q+ +        
Sbjct: 1   MDTLFVNRCLSRLKLSPNLTVPSSSPSFFSHQFLKTQPLKPSFTLFAIQNQETQNPLQPS 60

Query: 61  SEDDGSYGEVDGIIGSRALSDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTA 120
           ++DD SYGEV  IIGS+AL D TGMEYLI+WKDGH+PSWVPS++IAKDV+AEYE+PWWTA
Sbjct: 61  TQDDESYGEVSKIIGSKALEDGTGMEYLIEWKDGHTPSWVPSNYIAKDVIAEYESPWWTA 120

Query: 121 AKKADESALKSLIDSADGRDVDAVDEDGRTALLFVAGLGSDPCVRMLAEAGANLDHRDNS 180
           AKKAD +AL  L+ + D RDVDAVD  GRTALLFV+GLGS+PCV++LAEAGA+L+HRDNS
Sbjct: 121 AKKADHAALSELLSADDDRDVDAVDSYGRTALLFVSGLGSEPCVKLLAEAGADLNHRDNS 180

Query: 181 GGFTALHMAAGYVKPETVELLVELGADPEIEDEKGRTPLVLAREILKATPR---VQFMRR 240
           GG TALHMAAGYV+P  V+LL+ELGADPE+ED+KG TPL LA++IL  TP+    QF RR
Sbjct: 181 GGLTALHMAAGYVQPGIVKLLIELGADPEVEDDKGLTPLALAKQILNVTPKGNPAQFARR 240

Query: 241 LGLERVIGAVERVVYEYAEVEALLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVAD 300
           LGLE VI  +   ++EYAEV+ LLEKRGKG+ +EYLVKWKDG DNEWVK G+I EDL+ D
Sbjct: 241 LGLENVIRVINEEIFEYAEVQELLEKRGKGDKVEYLVKWKDGSDNEWVKAGVIGEDLIRD 300

Query: 301 FEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPQANVDPDLVNEYEKAQAQPQ 360
           FEAGLEYAVAE V+GKRV +DGK EYLVKWTDI +ATWEP+ NVDPDL+ E+E  Q    
Sbjct: 301 FEAGLEYAVAEGVMGKRVREDGKNEYLVKWTDIDEATWEPEENVDPDLIKEFEDGQVNNN 360

Query: 361 AQSSNG 363
             ++NG
Sbjct: 361 NNNTNG 366

BLAST of Lsi11G012440 vs. TAIR10
Match: AT2G47450.1 (AT2G47450.1 chloroplast signal recognition particle component (CAO))

HSP 1 Score: 412.9 bits (1060), Expect = 2.0e-115
Identity = 225/362 (62.15%), Postives = 273/362 (75.41%), Query Frame = 1

Query: 3   AVFVNQSLSRLKLSPKPPLPFPPSSSRIPHLNLRRNLKHFTPY---AVQSD-QPLTQQTQ 62
           A+ ++QSLSR+KLSP        S+     L +RR    F      AVQ + +  T   +
Sbjct: 12  ALVIHQSLSRIKLSPPKSSSSSSSAFSPESLPIRRIELCFRGAICAAVQRNYEETTSSVE 71

Query: 63  KSEDD----GSYGEVDGIIGSRALSDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYET 122
           ++E+D     SYGEV+ IIGSR   +   MEYLI+WKDGHSPSWVPS +IA DVV+EYET
Sbjct: 72  EAEEDDESSSSYGEVNKIIGSRTAGEGA-MEYLIEWKDGHSPSWVPSSYIAADVVSEYET 131

Query: 123 PWWTAAKKADESALKSLIDSADGRDVDAVDEDGRTALLFVAGLGSDPCVRMLAEAGANLD 182
           PWWTAA+KADE AL  L++    RDVDAVDE+GRTALLFVAGLGSD CVR+LAEAGA+LD
Sbjct: 132 PWWTAARKADEQALSQLLED---RDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLD 191

Query: 183 HRDNSGGFTALHMAAGYVKPETVELLVELGADPEIEDEKGRTPLVLAREILKATPR---V 242
           HRD  GG TALHMAAGYV+PE VE LVELGAD E+EDE+G T L LAREILK TP+   +
Sbjct: 192 HRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPM 251

Query: 243 QFMRRLGLERVIGAVERVVYEYAEVEALLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAE 302
           QF RR+GLE+VI  +E  V+EYAEV+ ++EKRGKG+++EYLV+WKDG D EWVK   +AE
Sbjct: 252 QFGRRIGLEKVINVLEGQVFEYAEVDEIVEKRGKGKDVEYLVRWKDGGDCEWVKGVHVAE 311

Query: 303 DLVADFEAGLEYAVAEAVVGKRVGDDGK-MEYLVKWTDIQDATWEPQANVDPDLVNEYEK 353
           D+  D+E GLEYAVAE+V+GKRVGDDGK +EYLVKWTD+ DATWEPQ NVD  LV  Y++
Sbjct: 312 DVAKDYEDGLEYAVAESVIGKRVGDDGKTIEYLVKWTDMSDATWEPQDNVDSTLVLLYQQ 369

BLAST of Lsi11G012440 vs. TAIR10
Match: AT4G35450.5 (AT4G35450.5 ankyrin repeat-containing protein 2)

HSP 1 Score: 63.5 bits (153), Expect = 3.0e-10
Identity = 42/120 (35.00%), Postives = 66/120 (55.00%), Query Frame = 1

Query: 120 AKKADESALKSLIDSADGRDVDAVDEDGRTALLFVAGLGSDPCVRMLAEAGANLDHRDNS 179
           A   D   LK+ +  A G + D  D +GRTAL F  G G   C ++L +AGA+++  D +
Sbjct: 234 ASLGDVEGLKAAL--ASGGNKDEEDSEGRTALHFACGYGELKCAQVLIDAGASVNAVDKN 293

Query: 180 GGFTALHMAAGYVKPETVELLVELGADPEIEDEKGRTPLVLAR-----EILKATPRVQFM 235
              T LH AAGY + E V LL+E GA   +++   +TP+ +A+     E++K   +  F+
Sbjct: 294 KN-TPLHYAAGYGRKECVSLLLENGAAVTLQNLDEKTPIDVAKLNSQLEVVKLLEKDAFL 350

BLAST of Lsi11G012440 vs. TAIR10
Match: AT2G17390.1 (AT2G17390.1 ankyrin repeat-containing 2B)

HSP 1 Score: 62.8 bits (151), Expect = 5.1e-10
Identity = 40/103 (38.83%), Postives = 56/103 (54.37%), Query Frame = 1

Query: 120 AKKADESALKSLIDSADGRDVDAVDEDGRTALLFVAGLGSDPCVRMLAEAGANLDHRDNS 179
           A   D   LK+ +  A G + D  D +GRTAL F  G G   C ++L +AGAN +  D +
Sbjct: 228 ASLGDVEGLKAAL--ASGGNKDEEDSEGRTALHFACGYGEVRCAQVLLDAGANANAIDKN 287

Query: 180 GGFTALHMAAGYVKPETVELLVELGADPEIEDEKGRTPLVLAR 223
              T LH AAGY + E V LL+E GA    ++   + P+ +AR
Sbjct: 288 KN-TPLHYAAGYGRKECVSLLLENGAAVTQQNMDNKNPIDVAR 327

BLAST of Lsi11G012440 vs. TAIR10
Match: AT5G09410.3 (AT5G09410.3 ethylene induced calmodulin binding protein)

HSP 1 Score: 58.9 bits (141), Expect = 7.4e-09
Identity = 38/92 (41.30%), Postives = 54/92 (58.70%), Query Frame = 1

Query: 136 DGRDVDAVDEDGRTALLFVAGLGSDPCVRMLAEAGANLDHRDNSGGFTALHMAAGYVKPE 195
           +G+  + +DEDG+  L FVA LG D  ++ +  AG N++ RD + G++ALH AA   + E
Sbjct: 661 EGKGPNILDEDGQGILHFVAALGYDWAIKPVLAAGVNINFRD-ANGWSALHWAAFSGREE 720

Query: 196 TVELLVELGA------DPEIEDEKGRTPLVLA 222
           TV +LV LGA      DP  E   G+T   LA
Sbjct: 721 TVAVLVSLGADAGALTDPSPELPLGKTAADLA 751

BLAST of Lsi11G012440 vs. TAIR10
Match: AT3G04710.1 (AT3G04710.1 ankyrin repeat family protein)

HSP 1 Score: 58.5 bits (140), Expect = 9.7e-09
Identity = 51/179 (28.49%), Postives = 84/179 (46.93%), Query Frame = 1

Query: 43  TPYAVQSDQPLTQQTQKSEDDGSYGEVDGIIGSRALSDATGMEYLIKWKDGHSPSWVPSD 102
           TP    + Q   +  +   + G+   +   +G+ AL  A G   +   K+      + S 
Sbjct: 91  TPLVHAARQGQIETVKYLLEQGADPNIASELGATALHHAAGTGEIELLKE------LLSR 150

Query: 103 FIAKDVVAEYETPWWTAAKKADESALKSLIDSADGRDVDAVDEDGRTALLFVAGLGSDPC 162
            +  D  +E  TP   AA    ++A++ L++     + +A  ED  T LL     GS  C
Sbjct: 151 GVPVDSESESGTPLIWAAGHDQKNAVEVLLEH--NANPNAETEDNITPLLSAVAAGSLSC 210

Query: 163 VRMLAEAGANLDHRDNSGGFTALHMAAGYVKPETVELLVELGADPEIEDEKGRTPLVLA 222
           + +L +AGA  +    +GG T LH+AA     E +  L++ GADP  +DE+G  PL +A
Sbjct: 211 LELLVKAGAKANVF--AGGATPLHIAADIGNLELINCLLKAGADPNQKDEEGNRPLEVA 259

BLAST of Lsi11G012440 vs. NCBI nr
Match: gi|659094128|ref|XP_008447900.1| (PREDICTED: signal recognition particle 43 kDa protein, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 632.1 bits (1629), Expect = 6.0e-178
Identity = 322/366 (87.98%), Postives = 337/366 (92.08%), Query Frame = 1

Query: 1   MDAVFVNQSLSRLKLSPKPPLPFP-PSSSRIPHLNLRRNLKHFTPYAVQSDQPLTQQTQK 60
           M+AVF+NQSLSRLKL PKPPLP P P  S IPHLNLRRN  HFT YAVQSDQP+TQQT K
Sbjct: 1   MEAVFLNQSLSRLKLPPKPPLPLPIPFPSTIPHLNLRRNFTHFTAYAVQSDQPITQQTYK 60

Query: 61  SEDDGSYGEVDGIIGSRALSDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTA 120
            EDD SYGEVDGIIGSRAL DATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTA
Sbjct: 61  PEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTA 120

Query: 121 AKKADESALKSLIDSADGRDVDAVDEDGRTALLFVAGLGSDPCVRMLAEAGANLDHRDNS 180
           AKKAD+SAL+SLIDS D RD DAVDEDGRTALLFV+GLGS  CVR+LAEAG NL+HRDNS
Sbjct: 121 AKKADKSALESLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILAEAGVNLNHRDNS 180

Query: 181 GGFTALHMAAGYVKPETVELLVELGADPEIEDEKGRTPLVLAREILKATPRVQFMRRLGL 240
           GGFTALHMAAGYVKPETVELLVELGADPEIEDEKGRT L LA+EILKATPRVQFMRRLGL
Sbjct: 181 GGFTALHMAAGYVKPETVELLVELGADPEIEDEKGRTALELAKEILKATPRVQFMRRLGL 240

Query: 241 ERVIGAVERVVYEYAEVEALLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVADFEA 300
           E+VIGAVE+VVYEYAEVE LLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVAD+EA
Sbjct: 241 EKVIGAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVADYEA 300

Query: 301 GLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPQANVDPDLVNEYEKAQAQPQAQS 360
           GLEYAVAEAVVGKRVGD+GKMEYLVKWTDIQDATWEP  NVDPDL+NE+EKA    QAQS
Sbjct: 301 GLEYAVAEAVVGKRVGDEGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKA----QAQS 360

Query: 361 SNGSAL 366
           SN SAL
Sbjct: 361 SNDSAL 362

BLAST of Lsi11G012440 vs. NCBI nr
Match: gi|659094126|ref|XP_008447899.1| (PREDICTED: signal recognition particle 43 kDa protein, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 629.8 bits (1623), Expect = 3.0e-177
Identity = 317/357 (88.80%), Postives = 332/357 (93.00%), Query Frame = 1

Query: 1   MDAVFVNQSLSRLKLSPKPPLPFP-PSSSRIPHLNLRRNLKHFTPYAVQSDQPLTQQTQK 60
           M+AVF+NQSLSRLKL PKPPLP P P  S IPHLNLRRN  HFT YAVQSDQP+TQQT K
Sbjct: 1   MEAVFLNQSLSRLKLPPKPPLPLPIPFPSTIPHLNLRRNFTHFTAYAVQSDQPITQQTYK 60

Query: 61  SEDDGSYGEVDGIIGSRALSDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTA 120
            EDD SYGEVDGIIGSRAL DATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTA
Sbjct: 61  PEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTA 120

Query: 121 AKKADESALKSLIDSADGRDVDAVDEDGRTALLFVAGLGSDPCVRMLAEAGANLDHRDNS 180
           AKKAD+SAL+SLIDS D RD DAVDEDGRTALLFV+GLGS  CVR+LAEAG NL+HRDNS
Sbjct: 121 AKKADKSALESLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILAEAGVNLNHRDNS 180

Query: 181 GGFTALHMAAGYVKPETVELLVELGADPEIEDEKGRTPLVLAREILKATPRVQFMRRLGL 240
           GGFTALHMAAGYVKPETVELLVELGADPEIEDEKGRT L LA+EILKATPRVQFMRRLGL
Sbjct: 181 GGFTALHMAAGYVKPETVELLVELGADPEIEDEKGRTALELAKEILKATPRVQFMRRLGL 240

Query: 241 ERVIGAVERVVYEYAEVEALLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVADFEA 300
           E+VIGAVE+VVYEYAEVE LLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVAD+EA
Sbjct: 241 EKVIGAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVADYEA 300

Query: 301 GLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPQANVDPDLVNEYEKAQAQPQ 357
           GLEYAVAEAVVGKRVGD+GKMEYLVKWTDIQDATWEP  NVDPDL+NE+EKAQAQ Q
Sbjct: 301 GLEYAVAEAVVGKRVGDEGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQAQ 357

BLAST of Lsi11G012440 vs. NCBI nr
Match: gi|449472373|ref|XP_004153574.1| (PREDICTED: signal recognition particle 43 kDa protein, chloroplastic [Cucumis sativus])

HSP 1 Score: 625.5 bits (1612), Expect = 5.6e-176
Identity = 315/354 (88.98%), Postives = 329/354 (92.94%), Query Frame = 1

Query: 1   MDAVFVNQSLSRLKLSPKPPLPFPPSSSRIPHLNLRRNLKHFTPYAVQSDQPLTQQTQKS 60
           M+AVF+NQSLSRLKL PK PLPFP   S IPHLNLRRN  HFT YAVQSDQP+TQQTQK 
Sbjct: 1   MEAVFLNQSLSRLKLPPKTPLPFP---SPIPHLNLRRNFTHFTAYAVQSDQPITQQTQKP 60

Query: 61  EDDGSYGEVDGIIGSRALSDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTAA 120
           EDD SYGEVDGIIGSRAL DATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTAA
Sbjct: 61  EDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTAA 120

Query: 121 KKADESALKSLIDSADGRDVDAVDEDGRTALLFVAGLGSDPCVRMLAEAGANLDHRDNSG 180
           KKADESALKSLIDS D RD DAVDEDGRTALLFV+GLGS  CVR+LA+AG NL+HRDNSG
Sbjct: 121 KKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDNSG 180

Query: 181 GFTALHMAAGYVKPETVELLVELGADPEIEDEKGRTPLVLAREILKATPRVQFMRRLGLE 240
           GFTALHMAAGYVKPETVELLVELGADPEI+DEKGRT L LA+EILKATPRVQFMRRLGLE
Sbjct: 181 GFTALHMAAGYVKPETVELLVELGADPEIDDEKGRTALELAKEILKATPRVQFMRRLGLE 240

Query: 241 RVIGAVERVVYEYAEVEALLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVADFEAG 300
           +VI AVE+VVYEYAEVE LLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLV D+EAG
Sbjct: 241 KVIRAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVGDYEAG 300

Query: 301 LEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPQANVDPDLVNEYEKAQAQ 355
           LEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEP  NVDPDL+NE+EKAQAQ
Sbjct: 301 LEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQ 351

BLAST of Lsi11G012440 vs. NCBI nr
Match: gi|1009150816|ref|XP_015893225.1| (PREDICTED: signal recognition particle 43 kDa protein, chloroplastic-like [Ziziphus jujuba])

HSP 1 Score: 480.3 bits (1235), Expect = 2.9e-132
Identity = 249/366 (68.03%), Postives = 287/366 (78.42%), Query Frame = 1

Query: 1   MDAVFVNQSLSRLKLSPKPPLPFPPSSSRIPHLNLRRNLK-HFTPYAV--------QSDQ 60
           M+A+FVNQSLSRLKLSP     F  SS       L+   K H TP  +        QS  
Sbjct: 1   MEALFVNQSLSRLKLSPN----FTTSSFPSQSYRLKPTQKAHPTPTPICVIQNPEKQSQA 60

Query: 61  PLTQQTQK--SEDDGSYGEVDGIIGSRALSDATGMEYLIKWKDGHSPSWVPSDFIAKDVV 120
           P     QK  +EDD  YGEVD IIGSRA    TGMEYLI+WKDGH+PSWV SD+IAKDVV
Sbjct: 61  PTLSGNQKRGNEDDEYYGEVDKIIGSRAAEGKTGMEYLIEWKDGHTPSWVSSDYIAKDVV 120

Query: 121 AEYETPWWTAAKKADESALKSLIDSADGRDVDAVDEDGRTALLFVAGLGSDPCVRMLAEA 180
           AEYETPWWTAAKKAD +ALK LI++ DGRD+DAVD DGRTALLFV+GLGS+ CVR+LAE+
Sbjct: 121 AEYETPWWTAAKKADHNALKRLIEADDGRDIDAVDSDGRTALLFVSGLGSEECVRVLAES 180

Query: 181 GANLDHRDNSGGFTALHMAAGYVKPETVELLVELGADPEIEDEKGRTPLVLAREILKATP 240
           GA+LDHRDNSGG TALHMAAGYVKP   +LL+ELGADPE++D++GRTPL LA+EILK TP
Sbjct: 181 GADLDHRDNSGGLTALHMAAGYVKPGVAKLLMELGADPEVQDDRGRTPLDLAKEILKVTP 240

Query: 241 R---VQFMRRLGLERVIGAVERVVYEYAEVEALLEKRGKGENLEYLVKWKDGEDNEWVKV 300
           +   +QF RRLGLE VI A+E VV+EYAEV+ LLEKRGKG+NLEYLVKWKDG+DN WVK 
Sbjct: 241 KGNPMQFARRLGLESVIRALEEVVFEYAEVQELLEKRGKGDNLEYLVKWKDGDDNTWVKA 300

Query: 301 GLIAEDLVADFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPQANVDPDLVN 353
             I EDL+ D+EAGLEYAVAE V+GKR+GDDGK EYLVKWTDI DATWEP+ NVDPDL+ 
Sbjct: 301 RFIGEDLIKDYEAGLEYAVAEGVLGKRLGDDGKNEYLVKWTDIDDATWEPEENVDPDLIK 360

BLAST of Lsi11G012440 vs. NCBI nr
Match: gi|1009150731|ref|XP_015893177.1| (PREDICTED: signal recognition particle 43 kDa protein, chloroplastic-like isoform X2 [Ziziphus jujuba])

HSP 1 Score: 479.6 bits (1233), Expect = 5.0e-132
Identity = 249/366 (68.03%), Postives = 287/366 (78.42%), Query Frame = 1

Query: 1   MDAVFVNQSLSRLKLSPKPPLPFPPSSSRIPHLNLRRNLK-HFTPYAV--------QSDQ 60
           M+A+FVNQSLSRLKLSP     F  SS       L+   K H TP  +        QS  
Sbjct: 1   MEALFVNQSLSRLKLSPN----FTTSSFPSQSYRLKPTQKAHPTPTPICVIQNPEKQSQA 60

Query: 61  PLTQQTQK--SEDDGSYGEVDGIIGSRALSDATGMEYLIKWKDGHSPSWVPSDFIAKDVV 120
           P     QK  +EDD  YGEVD IIGSRA    TGMEYLI+WKDGH+PSWV SD+IAKDVV
Sbjct: 61  PTLSGNQKRGNEDDEYYGEVDKIIGSRAAEGKTGMEYLIEWKDGHTPSWVSSDYIAKDVV 120

Query: 121 AEYETPWWTAAKKADESALKSLIDSADGRDVDAVDEDGRTALLFVAGLGSDPCVRMLAEA 180
           AEYETPWWTAAKKAD +ALK LI++ DGRD+DAVD DGRTALLFV+GLGS+ CVR+LAEA
Sbjct: 121 AEYETPWWTAAKKADHNALKRLIEADDGRDIDAVDSDGRTALLFVSGLGSEECVRVLAEA 180

Query: 181 GANLDHRDNSGGFTALHMAAGYVKPETVELLVELGADPEIEDEKGRTPLVLAREILKATP 240
           GA+LDHR+NSGG TALHMAAGYVKP   +LL+ELGADPE++D++GRTPL LA+EILK TP
Sbjct: 181 GADLDHRNNSGGLTALHMAAGYVKPGVAKLLMELGADPEVQDDRGRTPLDLAKEILKVTP 240

Query: 241 R---VQFMRRLGLERVIGAVERVVYEYAEVEALLEKRGKGENLEYLVKWKDGEDNEWVKV 300
           +   +QF RRLGLE VI A+E VV+EYAEV+ LLEKRGKG+NLEYLVKWKDG+DN WVK 
Sbjct: 241 KGNPMQFARRLGLESVIRALEEVVFEYAEVQELLEKRGKGDNLEYLVKWKDGDDNTWVKA 300

Query: 301 GLIAEDLVADFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPQANVDPDLVN 353
             I EDL+ D+EAGLEYAVAE V+GKR+GDDGK EYLVKWTDI DATWEP+ NVDPDL+ 
Sbjct: 301 RFIGEDLIKDYEAGLEYAVAEGVLGKRLGDDGKNEYLVKWTDIDDATWEPEENVDPDLIK 360

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
SR43C_ARATH3.6e-11462.15Signal recognition particle 43 kDa protein, chloroplastic OS=Arabidopsis thalian... [more]
SR43C_ORYSJ8.6e-9250.13Probable signal recognition particle 43 kDa protein, chloroplastic OS=Oryza sati... [more]
ANKH_ALLVD2.4e-0939.37Ankyrin homolog OS=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 10... [more]
HECD1_MOUSE4.1e-0933.98E3 ubiquitin-protein ligase HECTD1 OS=Mus musculus GN=Hectd1 PE=1 SV=2[more]
AKR2A_ARATH5.4e-0935.00Ankyrin repeat domain-containing protein 2A OS=Arabidopsis thaliana GN=AKR2A PE=... [more]
Match NameE-valueIdentityDescription
A0A0A0K634_CUCSA3.9e-17688.98Uncharacterized protein OS=Cucumis sativus GN=Csa_7G018780 PE=4 SV=1[more]
V4SA78_9ROSI2.3e-13165.64Uncharacterized protein OS=Citrus clementina GN=CICLE_v10028628mg PE=4 SV=1[more]
A0A067FLG7_CITSI2.3e-13165.64Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g016433mg PE=4 SV=1[more]
B9HR05_POPTR1.1e-13067.03Chaos family protein OS=Populus trichocarpa GN=POPTR_0009s14260g PE=4 SV=2[more]
B9RF69_RICCO7.3e-13063.93Ankyrin repeat domain protein, putative OS=Ricinus communis GN=RCOM_1431980 PE=4... [more]
Match NameE-valueIdentityDescription
AT2G47450.12.0e-11562.15 chloroplast signal recognition particle component (CAO)[more]
AT4G35450.53.0e-1035.00 ankyrin repeat-containing protein 2[more]
AT2G17390.15.1e-1038.83 ankyrin repeat-containing 2B[more]
AT5G09410.37.4e-0941.30 ethylene induced calmodulin binding protein[more]
AT3G04710.19.7e-0928.49 ankyrin repeat family protein[more]
Match NameE-valueIdentityDescription
gi|659094128|ref|XP_008447900.1|6.0e-17887.98PREDICTED: signal recognition particle 43 kDa protein, chloroplastic isoform X2 ... [more]
gi|659094126|ref|XP_008447899.1|3.0e-17788.80PREDICTED: signal recognition particle 43 kDa protein, chloroplastic isoform X1 ... [more]
gi|449472373|ref|XP_004153574.1|5.6e-17688.98PREDICTED: signal recognition particle 43 kDa protein, chloroplastic [Cucumis sa... [more]
gi|1009150816|ref|XP_015893225.1|2.9e-13268.03PREDICTED: signal recognition particle 43 kDa protein, chloroplastic-like [Zizip... [more]
gi|1009150731|ref|XP_015893177.1|5.0e-13268.03PREDICTED: signal recognition particle 43 kDa protein, chloroplastic-like isofor... [more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Cellular Component
TermDefinition
GO:0080085signal recognition particle, chloroplast targeting
GO:0009507chloroplast
Vocabulary: Biological Process
TermDefinition
GO:0045038protein import into chloroplast thylakoid membrane
GO:0009416response to light stimulus
Vocabulary: INTERPRO
TermDefinition
IPR023780Chromo_domain
IPR020683Ankyrin_rpt-contain_dom
IPR016197Chromo-like_dom_sf
IPR002110Ankyrin_rpt
IPR000953Chromo/chromo_shadow_dom
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045038 protein import into chloroplast thylakoid membrane
biological_process GO:0010114 response to red light
biological_process GO:0009644 response to high light intensity
biological_process GO:0070208 protein heterotrimerization
biological_process GO:0009639 response to red or far red light
biological_process GO:0044238 primary metabolic process
biological_process GO:0071704 organic substance metabolic process
biological_process GO:0044237 cellular metabolic process
biological_process GO:0009416 response to light stimulus
biological_process GO:0009744 response to sucrose
biological_process GO:0010218 response to far red light
biological_process GO:0009637 response to blue light
biological_process GO:0010155 regulation of proton transport
biological_process GO:0046777 protein autophosphorylation
biological_process GO:0019344 cysteine biosynthetic process
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0044434 chloroplast part
cellular_component GO:0080085 signal recognition particle, chloroplast targeting
cellular_component GO:0009507 chloroplast
molecular_function GO:0042802 identical protein binding
molecular_function GO:0005515 protein binding
molecular_function GO:0030674 protein binding, bridging

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi11G012440.1Lsi11G012440.1mRNA


Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000953Chromo/chromo shadow domainSMARTSM00298chromo_7coord: 303..353
score: 7.9E-7coord: 65..117
score: 2.4E-4coord: 252..302
score: 1.
IPR000953Chromo/chromo shadow domainPROFILEPS50013CHROMO_2coord: 254..283
score: 8.557coord: 304..360
score: 11
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 146..175
score: 7.6coord: 111..142
score: 420.0coord: 180..209
score: 4.
IPR002110Ankyrin repeatPROFILEPS50088ANK_REPEATcoord: 180..212
score: 11.995coord: 146..178
score: 10
IPR016197Chromo domain-likeunknownSSF54160Chromo domain-likecoord: 252..299
score: 6.79E-10coord: 302..350
score: 5.15E-11coord: 62..116
score: 3.0
IPR020683Ankyrin repeat-containing domainGENE3DG3DSA:1.25.40.20coord: 113..223
score: 3.2
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 119..211
score: 2.9
IPR020683Ankyrin repeat-containing domainPROFILEPS50297ANK_REP_REGIONcoord: 137..221
score: 25
IPR020683Ankyrin repeat-containing domainunknownSSF48403Ankyrin repeatcoord: 111..223
score: 2.49
IPR023780Chromo domainPFAMPF00385Chromocoord: 306..350
score: 1.
NoneNo IPR availableGENE3DG3DSA:2.40.50.40coord: 57..112
score: 1.4E-4coord: 255..299
score: 5.3E-7coord: 302..356
score: 2.5
NoneNo IPR availablePANTHERPTHR24128FAMILY NOT NAMEDcoord: 1..354
score: 8.7E

The following gene(s) are paralogous to this gene:

None