CmaCh19G007690 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh19G007690
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Chloroplast signal recognition particle component
Location	Cma_Chr19 : 7574879 .. 7575802 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGACCAGTCTCTCTGCCCCAAGCAACCTCTCCCATCCCCCTCTCGGATTCCCCATCTCAATCTCCGCCGCAACTTCAAATGTTTCACACACTACGCCCTCCAAACCAATAAGCACCACGCACAACGGACTCACAAACCAGAGGACAATGAATCCCACGGCGAGGTCGATGCCATCATCGGAAGTCGAGCTCGGTCCGACGCCGCCGGGATGGAGTATCTAATCAAATGGAAAGACGGGTATTCCCCAACATGGGTCGCCTCCAATTTCATTGCTAAACACATTGTCGCAGACTACGAAGCCCCTTGGTGGACAGCTGCCAAGAAAGCCAACGAATCCGCATTAAAATCCCTCATAGACGCCGCCGACGGCCGCGATTTCGATTCCGTTGACGGAGATGGCAGAACCGCTCTGCTCTTCGTCGCTGGGCTTGGGTCAGAGCCGTGCGTGAGAATGTTAGCCGAGGCCGGCGTGAATCTCGATCACCGTGACTACTGCGGTGGGTTCACAGCGCTGCATATGGCGGCTGGGTATGTGAAACCAGGGACGGTGGAGTTGTTGGTGGATTTGGGGGCGGATCCGGAGGTCGAAGATAATAAGGGTCGGACGCCGTTGGGTCTGGCAAAAGGGATACTGAAAGCGACGCCGAAGGTTCATTTCGTGAGGAGAGTGGGGCTGGAGAGAGTGATCGGAGCGGTGGAGAAGGTGTGTTTTGAGTACGCGGAGGTGGAGAGATTGCTGGGGAGAAGGGGGATGGGAGAAGATTTGGAGTATTTGGTGAAATGGAAGGACGGAGAGGATAATGAGTGGGTGAATGTGGGGTTGATTTCGGCGGAGTTGGTGGCGGATTTTGAAGCTGCGTTGGAATACGCGGTGGCGGAGGCGGTGGTTGAGAAGAGGCTTAGGGAATGGGGACGATGA

mRNA sequence

ATGGACGACCAGTCTCTCTGCCCCAAGCAACCTCTCCCATCCCCCTCTCGGATTCCCCATCTCAATCTCCGCCGCAACTTCAAATGTTTCACACACTACGCCCTCCAAACCAATAAGCACCACGCACAACGGACTCACAAACCAGAGGACAATGAATCCCACGGCGAGGTCGATGCCATCATCGGAAGTCGAGCTCGGTCCGACGCCGCCGGGATGGAGTATCTAATCAAATGGAAAGACGGGTATTCCCCAACATGGGTCGCCTCCAATTTCATTGCTAAACACATTGTCGCAGACTACGAAGCCCCTTGGTGGACAGCTGCCAAGAAAGCCAACGAATCCGCATTAAAATCCCTCATAGACGCCGCCGACGGCCGCGATTTCGATTCCGTTGACGGAGATGGCAGAACCGCTCTGCTCTTCGTCGCTGGGCTTGGGTCAGAGCCGTGCGTGAGAATGTTAGCCGAGGCCGGCGTGAATCTCGATCACCGTGACTACTGCGGTGGGTTCACAGCGCTGCATATGGCGGCTGGGTATGTGAAACCAGGGACGGTGGAGTTGTTGGTGGATTTGGGGGCGGATCCGGAGGTCGAAGATAATAAGGGTCGGACGCCGTTGGGTCTGGCAAAAGGGATACTGAAAGCGACGCCGAAGGTTCATTTCGTGAGGAGAGTGGGGCTGGAGAGAGTGATCGGAGCGGTGGAGAAGGTGTGTTTTGAGTACGCGGAGGTGGAGAGATTGCTGGGGAGAAGGGGGATGGGAGAAGATTTGGAGTATTTGGTGAAATGGAAGGACGGAGAGGATAATGAGTGGGTGAATGTGGGGTTGATTTCGGCGGAGTTGGTGGCGGATTTTGAAGCTGCGTTGGAATACGCGGTGGCGGAGGCGGTGGTTGAGAAGAGGCTTAGGGAATGGGGACGATGA

Coding sequence (CDS)

ATGGACGACCAGTCTCTCTGCCCCAAGCAACCTCTCCCATCCCCCTCTCGGATTCCCCATCTCAATCTCCGCCGCAACTTCAAATGTTTCACACACTACGCCCTCCAAACCAATAAGCACCACGCACAACGGACTCACAAACCAGAGGACAATGAATCCCACGGCGAGGTCGATGCCATCATCGGAAGTCGAGCTCGGTCCGACGCCGCCGGGATGGAGTATCTAATCAAATGGAAAGACGGGTATTCCCCAACATGGGTCGCCTCCAATTTCATTGCTAAACACATTGTCGCAGACTACGAAGCCCCTTGGTGGACAGCTGCCAAGAAAGCCAACGAATCCGCATTAAAATCCCTCATAGACGCCGCCGACGGCCGCGATTTCGATTCCGTTGACGGAGATGGCAGAACCGCTCTGCTCTTCGTCGCTGGGCTTGGGTCAGAGCCGTGCGTGAGAATGTTAGCCGAGGCCGGCGTGAATCTCGATCACCGTGACTACTGCGGTGGGTTCACAGCGCTGCATATGGCGGCTGGGTATGTGAAACCAGGGACGGTGGAGTTGTTGGTGGATTTGGGGGCGGATCCGGAGGTCGAAGATAATAAGGGTCGGACGCCGTTGGGTCTGGCAAAAGGGATACTGAAAGCGACGCCGAAGGTTCATTTCGTGAGGAGAGTGGGGCTGGAGAGAGTGATCGGAGCGGTGGAGAAGGTGTGTTTTGAGTACGCGGAGGTGGAGAGATTGCTGGGGAGAAGGGGGATGGGAGAAGATTTGGAGTATTTGGTGAAATGGAAGGACGGAGAGGATAATGAGTGGGTGAATGTGGGGTTGATTTCGGCGGAGTTGGTGGCGGATTTTGAAGCTGCGTTGGAATACGCGGTGGCGGAGGCGGTGGTTGAGAAGAGGCTTAGGGAATGGGGACGATGA

Protein sequence

MDDQSLCPKQPLPSPSRIPHLNLRRNFKCFTHYALQTNKHHAQRTHKPEDNESHGEVDAIIGSRARSDAAGMEYLIKWKDGYSPTWVASNFIAKHIVADYEAPWWTAAKKANESALKSLIDAADGRDFDSVDGDGRTALLFVAGLGSEPCVRMLAEAGVNLDHRDYCGGFTALHMAAGYVKPGTVELLVDLGADPEVEDNKGRTPLGLAKGILKATPKVHFVRRVGLERVIGAVEKVCFEYAEVERLLGRRGMGEDLEYLVKWKDGEDNEWVNVGLISAELVADFEAALEYAVAEAVVEKRLREWGR

Homology

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BLAST of CmaCh19G007690 vs. Swiss-Prot
Match: SR43C_ARATH (Signal recognition particle 43 kDa protein, chloroplastic OS=Arabidopsis thaliana GN=CAO PE=1 SV=2)

HSP 1 Score: 305.1 bits (780), Expect = 8.9e-82
Identity = 160/302 (52.98%), Postives = 211/302 (69.87%), Query Frame = 1


Query: 14  SPSRIPHLNLRRNFKCFTHYALQTNKHHA-----QRTHKPEDNESHGEVDAIIGSRARSD 73
           SP  +P   +   F+     A+Q N         +     E + S+GEV+ IIGSR   +
Sbjct: 38  SPESLPIRRIELCFRGAICAAVQRNYEETTSSVEEAEEDDESSSSYGEVNKIIGSRTAGE 97

Query: 74  AAGMEYLIKWKDGYSPTWVASNFIAKHIVADYEAPWWTAAKKANESALKSLIDAADGRDF 133
            A MEYLI+WKDG+SP+WV S++IA  +V++YE PWWTAA+KA+E AL  L++    RD 
Sbjct: 98  GA-MEYLIEWKDGHSPSWVPSSYIAADVVSEYETPWWTAARKADEQALSQLLE---DRDV 157

Query: 134 DSVDGDGRTALLFVAGLGSEPCVRMLAEAGVNLDHRDYCGGFTALHMAAGYVKPGTVELL 193
           D+VD +GRTALLFVAGLGS+ CVR+LAEAG +LDHRD  GG TALHMAAGYV+P  VE L
Sbjct: 158 DAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEAL 217

Query: 194 VDLGADPEVEDNKGRTPLGLAKGILKATPK---VHFVRRVGLERVIGAVEKVCFEYAEVE 253
           V+LGAD EVED +G T L LA+ ILK TPK   + F RR+GLE+VI  +E   FEYAEV+
Sbjct: 218 VELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQVFEYAEVD 277

Query: 254 RLLGRRGMGEDLEYLVKWKDGEDNEWVNVGLISAELVADFEAALEYAVAEAVVEKRLREW 308
            ++ +RG G+D+EYLV+WKDG D EWV    ++ ++  D+E  LEYAVAE+V+ KR+ + 
Sbjct: 278 EIVEKRGKGKDVEYLVRWKDGGDCEWVKGVHVAEDVAKDYEDGLEYAVAESVIGKRVGDD 335

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BLAST of CmaCh19G007690 vs. Swiss-Prot
Match: SR43C_ORYSJ (Probable signal recognition particle 43 kDa protein, chloroplastic OS=Oryza sativa subsp. japonica GN=Os03g0131900 PE=2 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 7.6e-65
Identity = 137/318 (43.08%), Postives = 191/318 (60.06%), Query Frame = 1


Query: 9   KQPLPSPSRIPHLNL---------RRNFKCFTHYALQTNKHHAQRTHKPEDNESHGEVDA 68
           K P P+  R P L++          R       +  QTN  +   +   +D+E++GEVD 
Sbjct: 14  KPPNPNAQRTPALSITVPFRLRLPNRRLTAAAVFQDQTNPRNPA-SKGGDDDEAYGEVDR 73

Query: 69  IIGSR-----------ARSDAAGMEYLIKWKDGYSPTWVASNFIAKHIVADYEAPWWTAA 128
           I+ SR           + +     EYL++WKDG+ P+W+ +  IA  +VA+YE PWWTAA
Sbjct: 74  IVSSRTIKNPVFAEDGSATTVTATEYLVEWKDGHEPSWIPAEAIAADVVAEYETPWWTAA 133

Query: 129 KKANESALKSLI-DAADGRDFDSVDGDGRTALLFVAGLGSEPCVRMLAEAGVNLDHRDYC 188
           KKA+ + + +L+ D    RD D+ D  GRTA+ F AGLGSE CVR LAEAG ++   +  
Sbjct: 134 KKADAAEITALLADETLRRDPDAEDAQGRTAMHFAAGLGSEECVRALAEAGADVGRPERA 193

Query: 189 GG-FTALHMAAGYVKPGTVELLVDLGADPEVEDNKGRTPLGLAKGILKATPKVH---FVR 248
           GG  T LH+A GY +P  V  L++LGA+PE  D +GRTPL L + +L  TPK +   F R
Sbjct: 194 GGGLTPLHIAVGYGRPAAVRALLELGAEPEAPDGQGRTPLELVQDVLAKTPKGNPATFER 253

Query: 249 RVGLERVIGAVEKVCFEYAEVERLLGRRGMGEDLEYLVKWKDGEDNEWVNVGLISAELVA 302
           R+ LE     +EK  +E+ EVE+++  RG G+  EYLV+W+DG D EWV    ++ +LV 
Sbjct: 254 RLALEAAAKELEKAVYEWGEVEKVVDGRGEGKWREYLVEWRDGGDREWVRAAWVAEDLVK 313

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BLAST of CmaCh19G007690 vs. Swiss-Prot
Match: ANKH_ALLVD (Ankyrin homolog OS=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / NCIMB 10441 / D) GN=Alvin_1094 PE=3 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.7e-08
Identity = 41/100 (41.00%), Postives = 49/100 (49.00%), Query Frame = 1


Query: 107 AAKKANESALKSLIDAADGRDFDSVDGDGRTALLFVAGLGSEPCVRMLAEAGVNLDHRDY 166
           AA K     L  LI+   G D ++ D  G TALL  A  G    V  LA  G  LD  D 
Sbjct: 171 AASKGETGVLPLLIEG--GADLEARDKQGATALLIAADQGQAGAVETLAGLGAQLDAVDA 230

Query: 167 CGGFTALHMAAGYVKPGTVELLVDLGADPEVEDNKGRTPL 207
            G  TAL +A G+     VE L+ +GADP  +D KG T L
Sbjct: 231 LGS-TALILAVGHGHVAMVERLLAMGADPNRQDRKGTTAL 267

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BLAST of CmaCh19G007690 vs. Swiss-Prot
Match: ANR54_BOVIN (Ankyrin repeat domain-containing protein 54 OS=Bos taurus GN=ANKRD54 PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 8.5e-08
Identity = 52/159 (32.70%), Postives = 73/159 (45.91%), Query Frame = 1


Query: 115 ALKSLIDAADGRDFDSV-------------DGDGRTALLFVAGLGSEPCVRMLAEAGVNL 174
           ALK L D+A+  D ++V             D  GRTAL F +  G++  V++L + G + 
Sbjct: 109 ALKRLRDSANANDVETVQQLLEEGTDPCAADDKGRTALHFASCNGNDQIVQLLLDHGADP 168

Query: 175 DHRDYCGGFTALHMAAGYVKPGTVELLVDLGADPEVEDNKGRTPLGLAKGILKATPKVHF 234
           + RD  G  T LH+AA       +  L+  GA  +  D  GRTPL LAK  L    + H 
Sbjct: 169 NQRDGLGN-TPLHLAACTNHAPVITTLLRGGARVDALDRAGRTPLHLAKSKLNILQEGH- 228

Query: 235 VRRVGLERVIGAVEKVCFEYAEVERLLGRRGMGEDLEYL 261
                LE V   V+++     E    LGR    E L+ L
Sbjct: 229 --SQCLEAVRLEVKQIIQMLREYLERLGRHEQRERLDDL 263

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BLAST of CmaCh19G007690 vs. Swiss-Prot
Match: ANR50_HUMAN (Ankyrin repeat domain-containing protein 50 OS=Homo sapiens GN=ANKRD50 PE=1 SV=4)

HSP 1 Score: 58.9 bits (141), Expect = 1.1e-07
Identity = 55/192 (28.65%), Postives = 81/192 (42.19%), Query Frame = 1


Query: 40  HHAQRTHKPEDNESHGEVDAIIGSRARSDAAGMEYLIKW--------KDGYSPTWVAS-- 99
           H A+  H+  D  +   V A+    ++  A+ +  LI          KDG +P  VA+  
Sbjct: 699 HGAEVNHEDVDGRTALSVAALCVPASKGHASVVSLLIDRGAEVDHCDKDGMTPLLVAAYE 758

Query: 100 ------------NFIAKHIVADYEAPWWTAAKKANESALKSLIDAADGRDFDSVDGDGRT 159
                            H   +   P   AA   + S + +L+    G   DS+D +GRT
Sbjct: 759 GHVDVVDLLLEGGADVDHTDNNGRTPLLAAASMGHASVVNTLLFW--GAAVDSIDSEGRT 818

Query: 160 ALLFVAGLGSEPCVRMLAEAGVNLDHRDYCGGFTALHMAAGYVKPGTVELLVDLGADPEV 210
            L   +  G+   VR L + G++ +HRD   G+T LHMAA        E L++ GA    
Sbjct: 819 VLSIASAQGNVEVVRTLLDRGLDENHRD-DAGWTPLHMAAFEGHRLICEALIEQGARTNE 878

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BLAST of CmaCh19G007690 vs. TrEMBL
Match: A0A0A0K634_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G018780 PE=4 SV=1)

HSP 1 Score: 451.4 bits (1160), Expect = 8.5e-124
Identity = 224/302 (74.17%), Postives = 259/302 (85.76%), Query Frame = 1


Query: 6   LCPKQPLPSPSRIPHLNLRRNFKCFTHYALQTNKHHAQRTHKPEDNESHGEVDAIIGSRA 65
           L PK PLP PS IPHLNLRRNF  FT YA+Q+++   Q+T KPED+ES+GEVD IIGSRA
Sbjct: 15  LPPKTPLPFPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTQKPEDDESYGEVDGIIGSRA 74

Query: 66  RSDAAGMEYLIKWKDGYSPTWVASNFIAKHIVADYEAPWWTAAKKANESALKSLIDAADG 125
             DA GMEYLIKWKDG+SP+WV S+FIAK +VA+YE PWWTAAKKA+ESALKSLID+ D 
Sbjct: 75  LPDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDSGDE 134

Query: 126 RDFDSVDGDGRTALLFVAGLGSEPCVRMLAEAGVNLDHRDYCGGFTALHMAAGYVKPGTV 185
           RDFD+VD DGRTALLFV+GLGS  CVR+LA+AGVNL+HRD  GGFTALHMAAGYVKP TV
Sbjct: 135 RDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDNSGGFTALHMAAGYVKPETV 194

Query: 186 ELLVDLGADPEVEDNKGRTPLGLAKGILKATPKVHFVRRVGLERVIGAVEKVCFEYAEVE 245
           ELLV+LGADPE++D KGRT L LAK ILKATP+V F+RR+GLE+VI AVEKV +EYAEVE
Sbjct: 195 ELLVELGADPEIDDEKGRTALELAKEILKATPRVQFMRRLGLEKVIRAVEKVVYEYAEVE 254

Query: 246 RLLGRRGMGEDLEYLVKWKDGEDNEWVNVGLISAELVADFEAALEYAVAEAVVEKRLREW 305
            LL +RG GE+LEYLVKWKDGEDNEWV VGLI+ +LV D+EA LEYAVAEAVV KR+ + 
Sbjct: 255 ELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVGDYEAGLEYAVAEAVVGKRVGDD 314

Query: 306 GR 308
           G+
Sbjct: 315 GK 316

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BLAST of CmaCh19G007690 vs. TrEMBL
Match: B9RF69_RICCO (Ankyrin repeat domain protein, putative OS=Ricinus communis GN=RCOM_1431980 PE=4 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 3.4e-96
Identity = 179/302 (59.27%), Postives = 223/302 (73.84%), Query Frame = 1


Query: 11  PLPSPSRIPHLNLRRN--FKCFTHYALQTNKHHAQRTHKPEDNESHGEVDAIIGSRARSD 70
           P  SPS   H  L+       FT +A+Q  +         +D+ES+GEV  IIGS+A  D
Sbjct: 22  PSSSPSFFSHQFLKTQPLKPSFTLFAIQNQETQNPLQPSTQDDESYGEVSKIIGSKALED 81

Query: 71  AAGMEYLIKWKDGYSPTWVASNFIAKHIVADYEAPWWTAAKKANESALKSLIDAADGRDF 130
             GMEYLI+WKDG++P+WV SN+IAK ++A+YE+PWWTAAKKA+ +AL  L+ A D RD 
Sbjct: 82  GTGMEYLIEWKDGHTPSWVPSNYIAKDVIAEYESPWWTAAKKADHAALSELLSADDDRDV 141

Query: 131 DSVDGDGRTALLFVAGLGSEPCVRMLAEAGVNLDHRDYCGGFTALHMAAGYVKPGTVELL 190
           D+VD  GRTALLFV+GLGSEPCV++LAEAG +L+HRD  GG TALHMAAGYV+PG V+LL
Sbjct: 142 DAVDSYGRTALLFVSGLGSEPCVKLLAEAGADLNHRDNSGGLTALHMAAGYVQPGIVKLL 201

Query: 191 VDLGADPEVEDNKGRTPLGLAKGILKATPK---VHFVRRVGLERVIGAVEKVCFEYAEVE 250
           ++LGADPEVED+KG TPL LAK IL  TPK     F RR+GLE VI  + +  FEYAEV+
Sbjct: 202 IELGADPEVEDDKGLTPLALAKQILNVTPKGNPAQFARRLGLENVIRVINEEIFEYAEVQ 261

Query: 251 RLLGRRGMGEDLEYLVKWKDGEDNEWVNVGLISAELVADFEAALEYAVAEAVVEKRLREW 308
            LL +RG G+ +EYLVKWKDG DNEWV  G+I  +L+ DFEA LEYAVAE V+ KR+RE 
Sbjct: 262 ELLEKRGKGDKVEYLVKWKDGSDNEWVKAGVIGEDLIRDFEAGLEYAVAEGVMGKRVRED 321

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BLAST of CmaCh19G007690 vs. TrEMBL
Match: V7ADE1_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_011G025300g PE=4 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 1.3e-95
Identity = 179/302 (59.27%), Postives = 223/302 (73.84%), Query Frame = 1


Query: 8   PKQPLPSPSRIPHLNLRRNFKCFTHYALQTNKHHAQRTHKPEDNESHGEVDAIIGSRARS 67
           PK        +P  N    F+  T  A+Q  +  A    K  ++ES+GEV  IIGSRA  
Sbjct: 70  PKHFFKQQPFLPIPNNPTRFRLVTA-AIQNQQQEAAAASKDTEDESYGEVKGIIGSRALD 129

Query: 68  DAAGMEYLIKWKDGYSPTWVASNFIAKHIVADYEAPWWTAAKKANESALKSLIDAADGRD 127
            AAGMEYLI+WKDG++P+WV ++FIAK +VA+YE PWWTAAKKA+ESAL++L+D+ DGRD
Sbjct: 130 TAAGMEYLIEWKDGHAPSWVPADFIAKDVVAEYETPWWTAAKKADESALRNLVDSGDGRD 189

Query: 128 FDSVDGDGRTALLFVAGLGSEPCVRMLAEAGVNLDHRDYCGGFTALHMAAGYVKPGTVEL 187
            D+VD DGRTALLFVAGLGSEPCV++LAEAG NLDHRD  GG  ALHMAAGYV+PG  +L
Sbjct: 190 VDAVDADGRTALLFVAGLGSEPCVKLLAEAGANLDHRDRSGGLAALHMAAGYVRPGVAKL 249

Query: 188 LVDLGADPEVEDNKGRTPLGLAKGILKATPK---VHFVRRVGLERVIGAVEKVCFEYAEV 247
           L+D GADPEV D++GRT L LA+ ILKATPK   + F RR+GLE V+  +E   FEY E 
Sbjct: 250 LLDFGADPEVADDRGRTALDLAREILKATPKGNPMQFGRRIGLEGVVRVLEGAVFEYVEA 309

Query: 248 ERLLGRRGMGEDLEYLVKWKDGEDNEWVNVGLISAELVADFEAALEYAVAEAVVEKRLRE 307
           + +L +RG GE+LEYLV+WKDGE NEWV    ++ +LV D EA LEYAVAEAV+ KR+ +
Sbjct: 310 QEILEQRGKGENLEYLVRWKDGEANEWVKAKFVAEDLVRDHEAGLEYAVAEAVLAKRVAD 369

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BLAST of CmaCh19G007690 vs. TrEMBL
Match: A0A0L9V8W8_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan08g192600 PE=4 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 1.7e-95
Identity = 181/294 (61.56%), Postives = 226/294 (76.87%), Query Frame = 1


Query: 19  PHLNLRRN---FKCFTHYALQTNKHHAQRTHKPEDNESHGEVDAIIGSRARSDAAGMEYL 78
           P L +R+N   F+  T  ALQ N+   Q   K  ++ES+GEV  IIGSRA   A GMEYL
Sbjct: 31  PFLPIRQNPTRFRLVTA-ALQ-NQQQQQAASKDTEDESYGEVKGIIGSRALDAATGMEYL 90

Query: 79  IKWKDGYSPTWVASNFIAKHIVADYEAPWWTAAKKANESALKSLIDAADGRDFDSVDGDG 138
           I+WKDG+ P+WV ++FIAK +VA+YE PWWTAAKKA+E AL++L+++ADGRD D+VD +G
Sbjct: 91  IEWKDGHEPSWVPADFIAKDVVAEYETPWWTAAKKADEPALRNLLESADGRDVDAVDAEG 150

Query: 139 RTALLFVAGLGSEPCVRMLAEAGVNLDHRDYCGGFTALHMAAGYVKPGTVELLVDLGADP 198
           RTALLFVAGLGSEPCV++LAEAG NLDHRD  GG  ALHMAAGYV+PG  ++L+DLGADP
Sbjct: 151 RTALLFVAGLGSEPCVKLLAEAGANLDHRDRSGGLAALHMAAGYVRPGVAKVLLDLGADP 210

Query: 199 EVEDNKGRTPLGLAKGILKATPK---VHFVRRVGLERVIGAVEKVCFEYAEVERLLGRRG 258
           EV D++GRT L LA+ ILKATPK   + F RR+GLE V+  +E   FEYAEVE +L RRG
Sbjct: 211 EVADDRGRTALDLAREILKATPKGNPLQFGRRIGLEGVVRVLEGAVFEYAEVEEILERRG 270

Query: 259 MGEDLEYLVKWKDGEDNEWVNVGLISAELVADFEAALEYAVAEAVVEKRLREWG 307
            GE+LEYLV+WKDG  NEWV    ++ +LV D+EA LEYAVAEAV+ KR+ + G
Sbjct: 271 KGENLEYLVRWKDGGANEWVKAKFVAEDLVRDYEAGLEYAVAEAVLAKRIADEG 322

[Close]

BLAST of CmaCh19G007690 vs. TrEMBL
Match: A0A0S3SE85_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.06G245100 PE=4 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 1.7e-95
Identity = 181/294 (61.56%), Postives = 226/294 (76.87%), Query Frame = 1


Query: 19  PHLNLRRN---FKCFTHYALQTNKHHAQRTHKPEDNESHGEVDAIIGSRARSDAAGMEYL 78
           P L +R+N   F+  T  ALQ N+   Q   K  ++ES+GEV  IIGSRA   A GMEYL
Sbjct: 31  PFLPIRQNPTRFRLVTA-ALQ-NQQQQQAASKDTEDESYGEVKGIIGSRALDAATGMEYL 90

Query: 79  IKWKDGYSPTWVASNFIAKHIVADYEAPWWTAAKKANESALKSLIDAADGRDFDSVDGDG 138
           I+WKDG+ P+WV ++FIAK +VA+YE PWWTAAKKA+E AL++L+++ADGRD D+VD +G
Sbjct: 91  IEWKDGHEPSWVPADFIAKDVVAEYETPWWTAAKKADEPALRNLLESADGRDVDAVDAEG 150

Query: 139 RTALLFVAGLGSEPCVRMLAEAGVNLDHRDYCGGFTALHMAAGYVKPGTVELLVDLGADP 198
           RTALLFVAGLGSEPCV++LAEAG NLDHRD  GG  ALHMAAGYV+PG  ++L+DLGADP
Sbjct: 151 RTALLFVAGLGSEPCVKLLAEAGANLDHRDRSGGLAALHMAAGYVRPGVAKVLLDLGADP 210

Query: 199 EVEDNKGRTPLGLAKGILKATPK---VHFVRRVGLERVIGAVEKVCFEYAEVERLLGRRG 258
           EV D++GRT L LA+ ILKATPK   + F RR+GLE V+  +E   FEYAEVE +L RRG
Sbjct: 211 EVADDRGRTALDLAREILKATPKGNPLQFGRRIGLEGVVRVLEGAVFEYAEVEEILERRG 270

Query: 259 MGEDLEYLVKWKDGEDNEWVNVGLISAELVADFEAALEYAVAEAVVEKRLREWG 307
            GE+LEYLV+WKDG  NEWV    ++ +LV D+EA LEYAVAEAV+ KR+ + G
Sbjct: 271 KGENLEYLVRWKDGGANEWVKAKFVAEDLVRDYEAGLEYAVAEAVLAKRIADEG 322

[Close]

BLAST of CmaCh19G007690 vs. TAIR10
Match: AT2G47450.1 (AT2G47450.1 chloroplast signal recognition particle component (CAO))

HSP 1 Score: 305.1 bits (780), Expect = 5.0e-83
Identity = 160/302 (52.98%), Postives = 211/302 (69.87%), Query Frame = 1


Query: 14  SPSRIPHLNLRRNFKCFTHYALQTNKHHA-----QRTHKPEDNESHGEVDAIIGSRARSD 73
           SP  +P   +   F+     A+Q N         +     E + S+GEV+ IIGSR   +
Sbjct: 38  SPESLPIRRIELCFRGAICAAVQRNYEETTSSVEEAEEDDESSSSYGEVNKIIGSRTAGE 97

Query: 74  AAGMEYLIKWKDGYSPTWVASNFIAKHIVADYEAPWWTAAKKANESALKSLIDAADGRDF 133
            A MEYLI+WKDG+SP+WV S++IA  +V++YE PWWTAA+KA+E AL  L++    RD 
Sbjct: 98  GA-MEYLIEWKDGHSPSWVPSSYIAADVVSEYETPWWTAARKADEQALSQLLE---DRDV 157

Query: 134 DSVDGDGRTALLFVAGLGSEPCVRMLAEAGVNLDHRDYCGGFTALHMAAGYVKPGTVELL 193
           D+VD +GRTALLFVAGLGS+ CVR+LAEAG +LDHRD  GG TALHMAAGYV+P  VE L
Sbjct: 158 DAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEAL 217

Query: 194 VDLGADPEVEDNKGRTPLGLAKGILKATPK---VHFVRRVGLERVIGAVEKVCFEYAEVE 253
           V+LGAD EVED +G T L LA+ ILK TPK   + F RR+GLE+VI  +E   FEYAEV+
Sbjct: 218 VELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQVFEYAEVD 277

Query: 254 RLLGRRGMGEDLEYLVKWKDGEDNEWVNVGLISAELVADFEAALEYAVAEAVVEKRLREW 308
            ++ +RG G+D+EYLV+WKDG D EWV    ++ ++  D+E  LEYAVAE+V+ KR+ + 
Sbjct: 278 EIVEKRGKGKDVEYLVRWKDGGDCEWVKGVHVAEDVAKDYEDGLEYAVAESVIGKRVGDD 335

[Close]

BLAST of CmaCh19G007690 vs. TAIR10
Match: AT4G35450.5 (AT4G35450.5 ankyrin repeat-containing protein 2)

HSP 1 Score: 58.5 bits (140), Expect = 8.2e-09
Identity = 33/88 (37.50%), Postives = 50/88 (56.82%), Query Frame = 1


Query: 123 ADGRDFDSVDGDGRTALLFVAGLGSEPCVRMLAEAGVNLDHRDYCGGFTALHMAAGYVKP 182
           A G + D  D +GRTAL F  G G   C ++L +AG +++  D     T LH AAGY + 
Sbjct: 247 ASGGNKDEEDSEGRTALHFACGYGELKCAQVLIDAGASVNAVDK-NKNTPLHYAAGYGRK 306

Query: 183 GTVELLVDLGADPEVEDNKGRTPLGLAK 211
             V LL++ GA   +++   +TP+ +AK
Sbjct: 307 ECVSLLLENGAAVTLQNLDEKTPIDVAK 333

[Close]

BLAST of CmaCh19G007690 vs. TAIR10
Match: AT2G17390.1 (AT2G17390.1 ankyrin repeat-containing 2B)

HSP 1 Score: 56.6 bits (135), Expect = 3.1e-08
Identity = 32/88 (36.36%), Postives = 47/88 (53.41%), Query Frame = 1


Query: 123 ADGRDFDSVDGDGRTALLFVAGLGSEPCVRMLAEAGVNLDHRDYCGGFTALHMAAGYVKP 182
           A G + D  D +GRTAL F  G G   C ++L +AG N +  D     T LH AAGY + 
Sbjct: 241 ASGGNKDEEDSEGRTALHFACGYGEVRCAQVLLDAGANANAIDK-NKNTPLHYAAGYGRK 300

Query: 183 GTVELLVDLGADPEVEDNKGRTPLGLAK 211
             V LL++ GA    ++   + P+ +A+
Sbjct: 301 ECVSLLLENGAAVTQQNMDNKNPIDVAR 327

[Close]

BLAST of CmaCh19G007690 vs. TAIR10
Match: AT5G66055.1 (AT5G66055.1 ankyrin repeat protein)

HSP 1 Score: 50.4 bits (119), Expect = 2.2e-06
Identity = 29/80 (36.25%), Postives = 44/80 (55.00%), Query Frame = 1


Query: 131 VDGDGRTALLFVAGLGSEPCVRMLA--EAGVNLDHRDYCGGFTALHMAAGYVKPGTVELL 190
           +D +G T + +     S P +++L    A +N   RD   G+T LH+A    +   V+LL
Sbjct: 322 LDDEGATLMHYAVQTASAPTIKLLLLYNADINAQDRD---GWTPLHVAVQARRSDIVKLL 381

Query: 191 VDLGADPEVEDNKGRTPLGL 209
           +  GAD EV++  G TPLGL
Sbjct: 382 LIKGADIEVKNKDGLTPLGL 398

[Close]

BLAST of CmaCh19G007690 vs. TAIR10
Match: AT3G04710.1 (AT3G04710.1 ankyrin repeat family protein)

HSP 1 Score: 49.3 bits (116), Expect = 4.9e-06
Identity = 27/76 (35.53%), Postives = 38/76 (50.00%), Query Frame = 1


Query: 134 DGRTALLFVAGLGSEPCVRMLAEAGVNLDHRDYCGGFTALHMAAGYVKPGTVELLVDLGA 193
           D  T LL     GS  C+ +L +AG   +   + GG T LH+AA       +  L+  GA
Sbjct: 186 DNITPLLSAVAAGSLSCLELLVKAGAKANV--FAGGATPLHIAADIGNLELINCLLKAGA 245

Query: 194 DPEVEDNKGRTPLGLA 210
           DP  +D +G  PL +A
Sbjct: 246 DPNQKDEEGNRPLEVA 259

[Close]

BLAST of CmaCh19G007690 vs. NCBI nr
Match: gi|449472373|ref|XP_004153574.1| (PREDICTED: signal recognition particle 43 kDa protein, chloroplastic [Cucumis sativus])

HSP 1 Score: 451.4 bits (1160), Expect = 1.2e-123
Identity = 224/302 (74.17%), Postives = 259/302 (85.76%), Query Frame = 1


Query: 6   LCPKQPLPSPSRIPHLNLRRNFKCFTHYALQTNKHHAQRTHKPEDNESHGEVDAIIGSRA 65
           L PK PLP PS IPHLNLRRNF  FT YA+Q+++   Q+T KPED+ES+GEVD IIGSRA
Sbjct: 15  LPPKTPLPFPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTQKPEDDESYGEVDGIIGSRA 74

Query: 66  RSDAAGMEYLIKWKDGYSPTWVASNFIAKHIVADYEAPWWTAAKKANESALKSLIDAADG 125
             DA GMEYLIKWKDG+SP+WV S+FIAK +VA+YE PWWTAAKKA+ESALKSLID+ D 
Sbjct: 75  LPDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDSGDE 134

Query: 126 RDFDSVDGDGRTALLFVAGLGSEPCVRMLAEAGVNLDHRDYCGGFTALHMAAGYVKPGTV 185
           RDFD+VD DGRTALLFV+GLGS  CVR+LA+AGVNL+HRD  GGFTALHMAAGYVKP TV
Sbjct: 135 RDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDNSGGFTALHMAAGYVKPETV 194

Query: 186 ELLVDLGADPEVEDNKGRTPLGLAKGILKATPKVHFVRRVGLERVIGAVEKVCFEYAEVE 245
           ELLV+LGADPE++D KGRT L LAK ILKATP+V F+RR+GLE+VI AVEKV +EYAEVE
Sbjct: 195 ELLVELGADPEIDDEKGRTALELAKEILKATPRVQFMRRLGLEKVIRAVEKVVYEYAEVE 254

Query: 246 RLLGRRGMGEDLEYLVKWKDGEDNEWVNVGLISAELVADFEAALEYAVAEAVVEKRLREW 305
            LL +RG GE+LEYLVKWKDGEDNEWV VGLI+ +LV D+EA LEYAVAEAVV KR+ + 
Sbjct: 255 ELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVGDYEAGLEYAVAEAVVGKRVGDD 314

Query: 306 GR 308
           G+
Sbjct: 315 GK 316

[Close]

BLAST of CmaCh19G007690 vs. NCBI nr
Match: gi|659094126|ref|XP_008447899.1| (PREDICTED: signal recognition particle 43 kDa protein, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 451.4 bits (1160), Expect = 1.2e-123
Identity = 222/297 (74.75%), Postives = 259/297 (87.21%), Query Frame = 1


Query: 11  PLPSPSRIPHLNLRRNFKCFTHYALQTNKHHAQRTHKPEDNESHGEVDAIIGSRARSDAA 70
           P+P PS IPHLNLRRNF  FT YA+Q+++   Q+T+KPED+ES+GEVD IIGSRA  DA 
Sbjct: 24  PIPFPSTIPHLNLRRNFTHFTAYAVQSDQPITQQTYKPEDDESYGEVDGIIGSRALPDAT 83

Query: 71  GMEYLIKWKDGYSPTWVASNFIAKHIVADYEAPWWTAAKKANESALKSLIDAADGRDFDS 130
           GMEYLIKWKDG+SP+WV S+FIAK +VA+YE PWWTAAKKA++SAL+SLID+ D RDFD+
Sbjct: 84  GMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTAAKKADKSALESLIDSGDERDFDA 143

Query: 131 VDGDGRTALLFVAGLGSEPCVRMLAEAGVNLDHRDYCGGFTALHMAAGYVKPGTVELLVD 190
           VD DGRTALLFV+GLGS  CVR+LAEAGVNL+HRD  GGFTALHMAAGYVKP TVELLV+
Sbjct: 144 VDEDGRTALLFVSGLGSVECVRILAEAGVNLNHRDNSGGFTALHMAAGYVKPETVELLVE 203

Query: 191 LGADPEVEDNKGRTPLGLAKGILKATPKVHFVRRVGLERVIGAVEKVCFEYAEVERLLGR 250
           LGADPE+ED KGRT L LAK ILKATP+V F+RR+GLE+VIGAVEKV +EYAEVE LL +
Sbjct: 204 LGADPEIEDEKGRTALELAKEILKATPRVQFMRRLGLEKVIGAVEKVVYEYAEVEELLEK 263

Query: 251 RGMGEDLEYLVKWKDGEDNEWVNVGLISAELVADFEAALEYAVAEAVVEKRLREWGR 308
           RG GE+LEYLVKWKDGEDNEWV VGLI+ +LVAD+EA LEYAVAEAVV KR+ + G+
Sbjct: 264 RGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVADYEAGLEYAVAEAVVGKRVGDEGK 320

[Close]

BLAST of CmaCh19G007690 vs. NCBI nr
Match: gi|659094128|ref|XP_008447900.1| (PREDICTED: signal recognition particle 43 kDa protein, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 451.4 bits (1160), Expect = 1.2e-123
Identity = 222/297 (74.75%), Postives = 259/297 (87.21%), Query Frame = 1


Query: 11  PLPSPSRIPHLNLRRNFKCFTHYALQTNKHHAQRTHKPEDNESHGEVDAIIGSRARSDAA 70
           P+P PS IPHLNLRRNF  FT YA+Q+++   Q+T+KPED+ES+GEVD IIGSRA  DA 
Sbjct: 24  PIPFPSTIPHLNLRRNFTHFTAYAVQSDQPITQQTYKPEDDESYGEVDGIIGSRALPDAT 83

Query: 71  GMEYLIKWKDGYSPTWVASNFIAKHIVADYEAPWWTAAKKANESALKSLIDAADGRDFDS 130
           GMEYLIKWKDG+SP+WV S+FIAK +VA+YE PWWTAAKKA++SAL+SLID+ D RDFD+
Sbjct: 84  GMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTAAKKADKSALESLIDSGDERDFDA 143

Query: 131 VDGDGRTALLFVAGLGSEPCVRMLAEAGVNLDHRDYCGGFTALHMAAGYVKPGTVELLVD 190
           VD DGRTALLFV+GLGS  CVR+LAEAGVNL+HRD  GGFTALHMAAGYVKP TVELLV+
Sbjct: 144 VDEDGRTALLFVSGLGSVECVRILAEAGVNLNHRDNSGGFTALHMAAGYVKPETVELLVE 203

Query: 191 LGADPEVEDNKGRTPLGLAKGILKATPKVHFVRRVGLERVIGAVEKVCFEYAEVERLLGR 250
           LGADPE+ED KGRT L LAK ILKATP+V F+RR+GLE+VIGAVEKV +EYAEVE LL +
Sbjct: 204 LGADPEIEDEKGRTALELAKEILKATPRVQFMRRLGLEKVIGAVEKVVYEYAEVEELLEK 263

Query: 251 RGMGEDLEYLVKWKDGEDNEWVNVGLISAELVADFEAALEYAVAEAVVEKRLREWGR 308
           RG GE+LEYLVKWKDGEDNEWV VGLI+ +LVAD+EA LEYAVAEAVV KR+ + G+
Sbjct: 264 RGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVADYEAGLEYAVAEAVVGKRVGDEGK 320

[Close]

BLAST of CmaCh19G007690 vs. NCBI nr
Match: gi|1009150816|ref|XP_015893225.1| (PREDICTED: signal recognition particle 43 kDa protein, chloroplastic-like [Ziziphus jujuba])

HSP 1 Score: 360.9 bits (925), Expect = 2.2e-96
Identity = 174/262 (66.41%), Postives = 214/262 (81.68%), Query Frame = 1


Query: 49  EDNESHGEVDAIIGSRARSDAAGMEYLIKWKDGYSPTWVASNFIAKHIVADYEAPWWTAA 108
           ED+E +GEVD IIGSRA     GMEYLI+WKDG++P+WV+S++IAK +VA+YE PWWTAA
Sbjct: 68  EDDEYYGEVDKIIGSRAAEGKTGMEYLIEWKDGHTPSWVSSDYIAKDVVAEYETPWWTAA 127

Query: 109 KKANESALKSLIDAADGRDFDSVDGDGRTALLFVAGLGSEPCVRMLAEAGVNLDHRDYCG 168
           KKA+ +ALK LI+A DGRD D+VD DGRTALLFV+GLGSE CVR+LAE+G +LDHRD  G
Sbjct: 128 KKADHNALKRLIEADDGRDIDAVDSDGRTALLFVSGLGSEECVRVLAESGADLDHRDNSG 187

Query: 169 GFTALHMAAGYVKPGTVELLVDLGADPEVEDNKGRTPLGLAKGILKATPK---VHFVRRV 228
           G TALHMAAGYVKPG  +LL++LGADPEV+D++GRTPL LAK ILK TPK   + F RR+
Sbjct: 188 GLTALHMAAGYVKPGVAKLLMELGADPEVQDDRGRTPLDLAKEILKVTPKGNPMQFARRL 247

Query: 229 GLERVIGAVEKVCFEYAEVERLLGRRGMGEDLEYLVKWKDGEDNEWVNVGLISAELVADF 288
           GLE VI A+E+V FEYAEV+ LL +RG G++LEYLVKWKDG+DN WV    I  +L+ D+
Sbjct: 248 GLESVIRALEEVVFEYAEVQELLEKRGKGDNLEYLVKWKDGDDNTWVKARFIGEDLIKDY 307

Query: 289 EAALEYAVAEAVVEKRLREWGR 308
           EA LEYAVAE V+ KRL + G+
Sbjct: 308 EAGLEYAVAEGVLGKRLGDDGK 329

[Close]

BLAST of CmaCh19G007690 vs. NCBI nr
Match: gi|1009150731|ref|XP_015893177.1| (PREDICTED: signal recognition particle 43 kDa protein, chloroplastic-like isoform X2 [Ziziphus jujuba])

HSP 1 Score: 360.1 bits (923), Expect = 3.7e-96
Identity = 174/262 (66.41%), Postives = 214/262 (81.68%), Query Frame = 1


Query: 49  EDNESHGEVDAIIGSRARSDAAGMEYLIKWKDGYSPTWVASNFIAKHIVADYEAPWWTAA 108
           ED+E +GEVD IIGSRA     GMEYLI+WKDG++P+WV+S++IAK +VA+YE PWWTAA
Sbjct: 68  EDDEYYGEVDKIIGSRAAEGKTGMEYLIEWKDGHTPSWVSSDYIAKDVVAEYETPWWTAA 127

Query: 109 KKANESALKSLIDAADGRDFDSVDGDGRTALLFVAGLGSEPCVRMLAEAGVNLDHRDYCG 168
           KKA+ +ALK LI+A DGRD D+VD DGRTALLFV+GLGSE CVR+LAEAG +LDHR+  G
Sbjct: 128 KKADHNALKRLIEADDGRDIDAVDSDGRTALLFVSGLGSEECVRVLAEAGADLDHRNNSG 187

Query: 169 GFTALHMAAGYVKPGTVELLVDLGADPEVEDNKGRTPLGLAKGILKATPK---VHFVRRV 228
           G TALHMAAGYVKPG  +LL++LGADPEV+D++GRTPL LAK ILK TPK   + F RR+
Sbjct: 188 GLTALHMAAGYVKPGVAKLLMELGADPEVQDDRGRTPLDLAKEILKVTPKGNPMQFARRL 247

Query: 229 GLERVIGAVEKVCFEYAEVERLLGRRGMGEDLEYLVKWKDGEDNEWVNVGLISAELVADF 288
           GLE VI A+E+V FEYAEV+ LL +RG G++LEYLVKWKDG+DN WV    I  +L+ D+
Sbjct: 248 GLESVIRALEEVVFEYAEVQELLEKRGKGDNLEYLVKWKDGDDNTWVKARFIGEDLIKDY 307

Query: 289 EAALEYAVAEAVVEKRLREWGR 308
           EA LEYAVAE V+ KRL + G+
Sbjct: 308 EAGLEYAVAEGVLGKRLGDDGK 329

The following BLAST results are available for this feature:

BLAST of CmaCh19G007690 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SR43C_ARATH	8.9e-82	52.98	Signal recognition particle 43 kDa protein, chloroplastic OS=Arabidopsis thalian...	[more]
SR43C_ORYSJ	7.6e-65	43.08	Probable signal recognition particle 43 kDa protein, chloroplastic OS=Oryza sati...	[more]
ANKH_ALLVD	1.7e-08	41.00	Ankyrin homolog OS=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 10...	[more]
ANR54_BOVIN	8.5e-08	32.70	Ankyrin repeat domain-containing protein 54 OS=Bos taurus GN=ANKRD54 PE=2 SV=1	[more]
ANR50_HUMAN	1.1e-07	28.65	Ankyrin repeat domain-containing protein 50 OS=Homo sapiens GN=ANKRD50 PE=1 SV=4	[more]

BLAST of CmaCh19G007690 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K634_CUCSA	8.5e-124	74.17	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G018780 PE=4 SV=1	[more]
B9RF69_RICCO	3.4e-96	59.27	Ankyrin repeat domain protein, putative OS=Ricinus communis GN=RCOM_1431980 PE=4...	[more]
V7ADE1_PHAVU	1.3e-95	59.27	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_011G025300g PE=4 SV=1	[more]
A0A0L9V8W8_PHAAN	1.7e-95	61.56	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan08g192600 PE=4 SV=1	[more]
A0A0S3SE85_PHAAN	1.7e-95	61.56	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.06G245100 PE=...	[more]

BLAST of CmaCh19G007690 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G47450.1	5.0e-83	52.98	chloroplast signal recognition particle component (CAO)	[more]
AT4G35450.5	8.2e-09	37.50	ankyrin repeat-containing protein 2	[more]
AT2G17390.1	3.1e-08	36.36	ankyrin repeat-containing 2B	[more]
AT5G66055.1	2.2e-06	36.25	ankyrin repeat protein	[more]
AT3G04710.1	4.9e-06	35.53	ankyrin repeat family protein	[more]

BLAST of CmaCh19G007690 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449472373\|ref\|XP_004153574.1\|	1.2e-123	74.17	PREDICTED: signal recognition particle 43 kDa protein, chloroplastic [Cucumis sa...	[more]
gi\|659094126\|ref\|XP_008447899.1\|	1.2e-123	74.75	PREDICTED: signal recognition particle 43 kDa protein, chloroplastic isoform X1 ...	[more]
gi\|659094128\|ref\|XP_008447900.1\|	1.2e-123	74.75	PREDICTED: signal recognition particle 43 kDa protein, chloroplastic isoform X2 ...	[more]
gi\|1009150816\|ref\|XP_015893225.1\|	2.2e-96	66.41	PREDICTED: signal recognition particle 43 kDa protein, chloroplastic-like [Zizip...	[more]
gi\|1009150731\|ref\|XP_015893177.1\|	3.7e-96	66.41	PREDICTED: signal recognition particle 43 kDa protein, chloroplastic-like isofor...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000953	Chromo/chromo_shadow_dom
IPR002110	Ankyrin_rpt
IPR016197	Chromo-like_dom_sf
IPR020683	Ankyrin_rpt-contain_dom

Vocabulary: **Biological Process**
Term	Definition
GO:0009416	response to light stimulus
GO:0045038	protein import into chloroplast thylakoid membrane

Vocabulary: **Cellular Component**
Term	Definition
GO:0009507	chloroplast
GO:0080085	signal recognition particle, chloroplast targeting

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044237	cellular metabolic process
biological_process	GO:0010155	regulation of proton transport
biological_process	GO:0009644	response to high light intensity
biological_process	GO:0070208	protein heterotrimerization
biological_process	GO:0009416	response to light stimulus
biological_process	GO:0009744	response to sucrose
biological_process	GO:0010114	response to red light
biological_process	GO:0010218	response to far red light
biological_process	GO:0071704	organic substance metabolic process
biological_process	GO:0009637	response to blue light
biological_process	GO:0046777	protein autophosphorylation
biological_process	GO:0019344	cysteine biosynthetic process
biological_process	GO:0009639	response to red or far red light
biological_process	GO:0045038	protein import into chloroplast thylakoid membrane
biological_process	GO:0044238	primary metabolic process
cellular_component	GO:0080085	signal recognition particle, chloroplast targeting
cellular_component	GO:0044434	chloroplast part
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0005515	protein binding
molecular_function	GO:0042802	identical protein binding
molecular_function	GO:0030674	protein binding, bridging

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh19G007690.1	CmaCh19G007690.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000953	Chromo/chromo shadow domain	SMART	SM00298	chromo_7	coord: 53..105 score: 0.24coord: 240..290 score: 1.
IPR000953	Chromo/chromo shadow domain	PROFILE	PS50013	CHROMO_2	coord: 242..307 score: 8
IPR002110	Ankyrin repeat	SMART	SM00248	ANK_2a	coord: 99..130 score: 2300.0coord: 168..197 score: 0.0037coord: 134..163 score:
IPR002110	Ankyrin repeat	PROFILE	PS50088	ANK_REPEAT	coord: 168..200 score: 11.22coord: 134..166 score: 9
IPR016197	Chromo domain-like	unknown	SSF54160	Chromo domain-like	coord: 240..287 score: 1.78E-10coord: 50..104 score: 1.3
IPR020683	Ankyrin repeat-containing domain	GENE3D	G3DSA:1.25.40.20		coord: 103..210 score: 1.3
IPR020683	Ankyrin repeat-containing domain	PFAM	PF12796	Ank_2	coord: 107..199 score: 1.8
IPR020683	Ankyrin repeat-containing domain	PROFILE	PS50297	ANK_REP_REGION	coord: 125..209 score: 22
IPR020683	Ankyrin repeat-containing domain	unknown	SSF48403	Ankyrin repeat	coord: 99..210 score: 5.13
None	No IPR available	GENE3D	G3DSA:2.40.50.40		coord: 45..102 score: 6.3E-5coord: 243..288 score: 2.
None	No IPR available	PANTHER	PTHR24128	FAMILY NOT NAMED	coord: 8..304 score: 6.7E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh19G007690	Cucsa.099260	Cucumber (Gy14) v1	cgycmaB0216
CmaCh19G007690	Cla015785	Watermelon (97103) v1	cmawmB503
CmaCh19G007690	Csa7G018780	Cucumber (Chinese Long) v2	cmacuB527
CmaCh19G007690	MELO3C013306	Melon (DHL92) v3.5.1	cmameB462
CmaCh19G007690	ClCG02G003690	Watermelon (Charleston Gray)	cmawcgB460
CmaCh19G007690	CSPI07G01370	Wild cucumber (PI 183967)	cmacpiB533
CmaCh19G007690	CmoCh11G017640	Cucurbita moschata (Rifu)	cmacmoB492
CmaCh19G007690	Lsi11G012440	Bottle gourd (USVL1VR-Ls)	cmalsiB472
CmaCh19G007690	Cp4.1LG15g06160	Cucurbita pepo (Zucchini)	cmacpeB522
CmaCh19G007690	Cp4.1LG04g04680	Cucurbita pepo (Zucchini)	cmacpeB537
CmaCh19G007690	MELO3C013306.2	Melon (DHL92) v3.6.1	cmamedB536
CmaCh19G007690	CsaV3_7G001450	Cucumber (Chinese Long) v3	cmacucB0638
CmaCh19G007690	Bhi05G001408	Wax gourd	cmawgoB0652
CmaCh19G007690	CsGy7G001220	Cucumber (Gy14) v2	cgybcmaB944
CmaCh19G007690	Carg26367	Silver-seed gourd	carcmaB1452
CmaCh19G007690	Carg25748	Silver-seed gourd	carcmaB1470

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh19G007690	Cucurbita pepo (Zucchini)	cmacpeB525
CmaCh19G007690	Cucurbita pepo (Zucchini)	cmacpeB552
CmaCh19G007690	Silver-seed gourd	carcmaB0484
CmaCh19G007690	Silver-seed gourd	carcmaB1119
CmaCh19G007690	Watermelon (97103) v2	cmawmbB531
CmaCh19G007690	Cucurbita maxima (Rimu)	cmacmaB151
CmaCh19G007690	Cucurbita maxima (Rimu)	cmacmaB445
CmaCh19G007690	Cucurbita maxima (Rimu)	cmacmaB448
CmaCh19G007690	Cucurbita moschata (Rifu)	cmacmoB508
CmaCh19G007690	Cucurbita moschata (Rifu)	cmacmoB522
CmaCh19G007690	Watermelon (Charleston Gray)	cmawcgB461