Lsi10G004350 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi10G004350
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	SAUR-like auxin-responsive protein family
Location	chr10 : 6560802 .. 6561089 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGTTTCGTCTTCCATCATCTTTGATTCCTCAGGCGAAGCAATTGCTGAGGAGGAGCTCGGGAAATCCATCGGCGGTTCCGAAAGGTCATGTGGCAGTGTACGTCGGAGAGTTTCAGAGGAAGCGATTTGTGATTCCGATTTCGTATTTGAATCATCTTTCGTTTCAACAGCTTCTCAGTCGAGCAGAGGAAGAGTTTGGATTTGATCATCCAGAAGGCGGTTTGACGATTCCTTGTGGAGAAGATGCGTTTATCGATCTCACTTCTAGATTGCAAGCTTGTTAA

mRNA sequence

ATGGGGTTTCGTCTTCCATCATCTTTGATTCCTCAGGCGAAGCAATTGCTGAGGAGGAGCTCGGGAAATCCATCGGCGGTTCCGAAAGGTCATGTGGCAGTGTACGTCGGAGAGTTTCAGAGGAAGCGATTTGTGATTCCGATTTCGTATTTGAATCATCTTTCGTTTCAACAGCTTCTCAGTCGAGCAGAGGAAGAGTTTGGATTTGATCATCCAGAAGGCGGTTTGACGATTCCTTGTGGAGAAGATGCGTTTATCGATCTCACTTCTAGATTGCAAGCTTGTTAA

Coding sequence (CDS)

ATGGGGTTTCGTCTTCCATCATCTTTGATTCCTCAGGCGAAGCAATTGCTGAGGAGGAGCTCGGGAAATCCATCGGCGGTTCCGAAAGGTCATGTGGCAGTGTACGTCGGAGAGTTTCAGAGGAAGCGATTTGTGATTCCGATTTCGTATTTGAATCATCTTTCGTTTCAACAGCTTCTCAGTCGAGCAGAGGAAGAGTTTGGATTTGATCATCCAGAAGGCGGTTTGACGATTCCTTGTGGAGAAGATGCGTTTATCGATCTCACTTCTAGATTGCAAGCTTGTTAA

Protein sequence

MGFRLPSSLIPQAKQLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQAC

Homology

[Close]

BLAST of Lsi10G004350 vs. Swiss-Prot
Match: SAU24_ARATH (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 1.9e-27
Identity = 56/81 (69.14%), Postives = 69/81 (85.19%), Query Frame = 1


Query: 13 AKQLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHP 72
          AK++L RS+G  SA PKG +AVYVGE Q+KR+++P+SYLN  SFQ LLS++EEEFGFDHP
Sbjct: 10 AKKILSRSTGAGSAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGFDHP 69

Query: 73 EGGLTIPCGEDAFIDLTSRLQ 94
           GGLTIPC ED FI++TSRLQ
Sbjct: 70 MGGLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of Lsi10G004350 vs. Swiss-Prot
Match: SAU20_ARATH (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 2.8e-26
Identity = 55/81 (67.90%), Postives = 67/81 (82.72%), Query Frame = 1


Query: 13 AKQLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHP 72
          AK++L RS+   SA PKG +AVYVGE Q+KR+++PISYLN  SFQ LLS++EEEFGFDHP
Sbjct: 10 AKKILSRSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFDHP 69

Query: 73 EGGLTIPCGEDAFIDLTSRLQ 94
           GGLTIPC ED FI++TSR Q
Sbjct: 70 MGGLTIPCPEDTFINVTSRFQ 90

[Close]

BLAST of Lsi10G004350 vs. Swiss-Prot
Match: SAU22_ARATH (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 2.8e-26
Identity = 54/81 (66.67%), Postives = 68/81 (83.95%), Query Frame = 1


Query: 13 AKQLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHP 72
          AK++L RS+   SA PKG +AVYVGE Q+KR+++P+SYLN  SFQ LLS++E+EFGFDHP
Sbjct: 10 AKKILSRSTAAVSAAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDEFGFDHP 69

Query: 73 EGGLTIPCGEDAFIDLTSRLQ 94
           GGLTIPC ED FI++TSRLQ
Sbjct: 70 MGGLTIPCHEDTFINVTSRLQ 90

[Close]

BLAST of Lsi10G004350 vs. Swiss-Prot
Match: SAU23_ARATH (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 1.1e-25
Identity = 54/80 (67.50%), Postives = 67/80 (83.75%), Query Frame = 1


Query: 13 AKQLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHP 72
          AK++L RS+   SA PKG +AVYVGE Q+KR+++P+SYLN  SFQ LLS++EEEFGFDHP
Sbjct: 10 AKKILSRSAAAVSAPPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEEFGFDHP 69

Query: 73 EGGLTIPCGEDAFIDLTSRL 93
           GGLTIPC ED FI++TSRL
Sbjct: 70 MGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of Lsi10G004350 vs. Swiss-Prot
Match: SAU19_ARATH (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana GN=SAUR19 PE=2 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 4.0e-25
Identity = 53/81 (65.43%), Postives = 67/81 (82.72%), Query Frame = 1


Query: 13 AKQLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHP 72
          AK++L RS+   SA PKG +AVYVGE Q+KR+++P+SYL+  SFQ LLS++EEEFGF HP
Sbjct: 10 AKKILSRSTAAGSAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFAHP 69

Query: 73 EGGLTIPCGEDAFIDLTSRLQ 94
           GGLTIPC ED FI++TSRLQ
Sbjct: 70 MGGLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of Lsi10G004350 vs. TrEMBL
Match: A0A0A0LJ85_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258640 PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 7.6e-47
Identity = 93/95 (97.89%), Postives = 93/95 (97.89%), Query Frame = 1


Query: 1  MGFRLPSSLIPQAKQLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLL 60
          MGFRLPSSLIPQAK LLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNH SFQQLL
Sbjct: 1  MGFRLPSSLIPQAKHLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHFSFQQLL 60

Query: 61 SRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQAC 96
          SRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQAC
Sbjct: 61 SRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQAC 95

[Close]

BLAST of Lsi10G004350 vs. TrEMBL
Match: A0A0A0LPI0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258720 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 2.0e-31
Identity = 73/96 (76.04%), Postives = 78/96 (81.25%), Query Frame = 1


Query: 1  MGFRLPSSLIPQAKQLLRRSSG---NPSAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQ 60
          MGFRL  SL+P AKQ+L+  SG   N   VPKGHVAVYVGE QRKRFV+PISYLN  SFQ
Sbjct: 1  MGFRL-LSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQ 60

Query: 61 QLLSRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQ 94
          QLLS AEEEFGF HP GGLTIPC EDAF+DLTSRLQ
Sbjct: 61 QLLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQ 95

[Close]

BLAST of Lsi10G004350 vs. TrEMBL
Match: A0A0D2PID8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G246600 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 1.3e-30
Identity = 69/98 (70.41%), Postives = 81/98 (82.65%), Query Frame = 1


Query: 1  MGFRLPSSLIPQAKQLLRRSSG---NPSAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQ 60
          MGFRLP+ +I  ++QLL+  SG     S VPKGHVAVYVGE QRKRFV+PI+YLNH SF+
Sbjct: 1  MGFRLPA-VIQSSRQLLKHHSGFFRKQSDVPKGHVAVYVGEAQRKRFVVPIAYLNHPSFK 60

Query: 61 QLLSRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQAC 96
          +LL+RAEEEFGFDHP GGLTIPC EDAFI+LTS+L  C
Sbjct: 61 ELLNRAEEEFGFDHPMGGLTIPCKEDAFINLTSKLHTC 97

[Close]

BLAST of Lsi10G004350 vs. TrEMBL
Match: A0A0A0LLF1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258700 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 8.4e-30
Identity = 69/97 (71.13%), Postives = 78/97 (80.41%), Query Frame = 1


Query: 1  MGFRLPSSLIPQAKQLLRRSSG---NPSAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQ 60
          MG RL  SL+P AKQ+L+  SG   N   VPKGHVAVYVGE QRKRFV+PISYLNH SF+
Sbjct: 1  MGIRL-LSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFK 60

Query: 61 QLLSRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQA 95
          QLL  AEEEFGF HP+GGLTIPC EDAF ++TS+LQA
Sbjct: 61 QLLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQA 96

[Close]

BLAST of Lsi10G004350 vs. TrEMBL
Match: A0A0A0LIY9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258660 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 1.9e-29
Identity = 68/95 (71.58%), Postives = 76/95 (80.00%), Query Frame = 1


Query: 1  MGFRLPSSLIPQAKQLLRRSSGNPSAVPKGHVAVYVGEF--QRKRFVIPISYLNHLSFQQ 60
          MG RLPSSLI  AKQ+L+    N S VP+GH+AVYVGE   QRKRFV+PIS+LNH SF+Q
Sbjct: 1  MGIRLPSSLIHHAKQILKMR--NQSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQ 60

Query: 61 LLSRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQ 94
          LLS  EEEFGF HP GGLTIPC EDAF+DLTSR Q
Sbjct: 61 LLSHVEEEFGFHHPHGGLTIPCKEDAFVDLTSRFQ 93

[Close]

BLAST of Lsi10G004350 vs. TAIR10
Match: AT5G18080.1 (AT5G18080.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 122.9 bits (307), Expect = 1.1e-28
Identity = 56/81 (69.14%), Postives = 69/81 (85.19%), Query Frame = 1


Query: 13 AKQLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHP 72
          AK++L RS+G  SA PKG +AVYVGE Q+KR+++P+SYLN  SFQ LLS++EEEFGFDHP
Sbjct: 10 AKKILSRSTGAGSAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGFDHP 69

Query: 73 EGGLTIPCGEDAFIDLTSRLQ 94
           GGLTIPC ED FI++TSRLQ
Sbjct: 70 MGGLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of Lsi10G004350 vs. TAIR10
Match: AT5G18050.1 (AT5G18050.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 119.0 bits (297), Expect = 1.6e-27
Identity = 54/81 (66.67%), Postives = 68/81 (83.95%), Query Frame = 1


Query: 13 AKQLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHP 72
          AK++L RS+   SA PKG +AVYVGE Q+KR+++P+SYLN  SFQ LLS++E+EFGFDHP
Sbjct: 10 AKKILSRSTAAVSAAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDEFGFDHP 69

Query: 73 EGGLTIPCGEDAFIDLTSRLQ 94
           GGLTIPC ED FI++TSRLQ
Sbjct: 70 MGGLTIPCHEDTFINVTSRLQ 90

[Close]

BLAST of Lsi10G004350 vs. TAIR10
Match: AT5G18020.1 (AT5G18020.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 119.0 bits (297), Expect = 1.6e-27
Identity = 55/81 (67.90%), Postives = 67/81 (82.72%), Query Frame = 1


Query: 13 AKQLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHP 72
          AK++L RS+   SA PKG +AVYVGE Q+KR+++PISYLN  SFQ LLS++EEEFGFDHP
Sbjct: 10 AKKILSRSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFDHP 69

Query: 73 EGGLTIPCGEDAFIDLTSRLQ 94
           GGLTIPC ED FI++TSR Q
Sbjct: 70 MGGLTIPCPEDTFINVTSRFQ 90

[Close]

BLAST of Lsi10G004350 vs. TAIR10
Match: AT5G18060.1 (AT5G18060.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 117.1 bits (292), Expect = 6.0e-27
Identity = 54/80 (67.50%), Postives = 67/80 (83.75%), Query Frame = 1


Query: 13 AKQLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHP 72
          AK++L RS+   SA PKG +AVYVGE Q+KR+++P+SYLN  SFQ LLS++EEEFGFDHP
Sbjct: 10 AKKILSRSAAAVSAPPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEEFGFDHP 69

Query: 73 EGGLTIPCGEDAFIDLTSRL 93
           GGLTIPC ED FI++TSRL
Sbjct: 70 MGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of Lsi10G004350 vs. TAIR10
Match: AT5G18010.1 (AT5G18010.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 115.2 bits (287), Expect = 2.3e-26
Identity = 53/81 (65.43%), Postives = 67/81 (82.72%), Query Frame = 1


Query: 13 AKQLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHP 72
          AK++L RS+   SA PKG +AVYVGE Q+KR+++P+SYL+  SFQ LLS++EEEFGF HP
Sbjct: 10 AKKILSRSTAAGSAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFAHP 69

Query: 73 EGGLTIPCGEDAFIDLTSRLQ 94
           GGLTIPC ED FI++TSRLQ
Sbjct: 70 MGGLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of Lsi10G004350 vs. NCBI nr
Match: gi|659115582|ref|XP_008457626.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 197.6 bits (501), Expect = 9.9e-48
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 1


Query: 1  MGFRLPSSLIPQAKQLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLL 60
          MGFRLPSSLIPQAKQLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLL
Sbjct: 1  MGFRLPSSLIPQAKQLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLL 60

Query: 61 SRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQAC 96
          SRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQAC
Sbjct: 61 SRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQAC 95

[Close]

BLAST of Lsi10G004350 vs. NCBI nr
Match: gi|778669575|ref|XP_011649267.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus])

HSP 1 Score: 194.1 bits (492), Expect = 1.1e-46
Identity = 93/95 (97.89%), Postives = 93/95 (97.89%), Query Frame = 1


Query: 1  MGFRLPSSLIPQAKQLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLL 60
          MGFRLPSSLIPQAK LLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNH SFQQLL
Sbjct: 1  MGFRLPSSLIPQAKHLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHFSFQQLL 60

Query: 61 SRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQAC 96
          SRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQAC
Sbjct: 61 SRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQAC 95

[Close]

BLAST of Lsi10G004350 vs. NCBI nr
Match: gi|700206757|gb|KGN61876.1| (hypothetical protein Csa_2G258720 [Cucumis sativus])

HSP 1 Score: 142.9 bits (359), Expect = 2.9e-31
Identity = 73/96 (76.04%), Postives = 78/96 (81.25%), Query Frame = 1


Query: 1  MGFRLPSSLIPQAKQLLRRSSG---NPSAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQ 60
          MGFRL  SL+P AKQ+L+  SG   N   VPKGHVAVYVGE QRKRFV+PISYLN  SFQ
Sbjct: 1  MGFRL-LSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQ 60

Query: 61 QLLSRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQ 94
          QLLS AEEEFGF HP GGLTIPC EDAF+DLTSRLQ
Sbjct: 61 QLLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQ 95

[Close]

BLAST of Lsi10G004350 vs. NCBI nr
Match: gi|659115592|ref|XP_008457632.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 141.0 bits (354), Expect = 1.1e-30
Identity = 72/96 (75.00%), Postives = 78/96 (81.25%), Query Frame = 1


Query: 1  MGFRLPSSLIPQAKQLLRRSSG---NPSAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQ 60
          MG RL  SL+P AKQ+L+  SG   N   VPKGHVAVYVGE QRKRFV+PISYLN  SFQ
Sbjct: 1  MGIRL-LSLVPHAKQILKMQSGFTKNRLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQ 60

Query: 61 QLLSRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQ 94
          QLL+RAEEEFGF HP GGLTIPC EDAF+DLTSRLQ
Sbjct: 61 QLLNRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQ 95

[Close]

BLAST of Lsi10G004350 vs. NCBI nr
Match: gi|659115596|ref|XP_008457635.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 140.6 bits (353), Expect = 1.4e-30
Identity = 72/96 (75.00%), Postives = 77/96 (80.21%), Query Frame = 1


Query: 1  MGFRLPSSLIPQAKQLLRRSSG---NPSAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQ 60
          MG RL  SL+P AKQLL+  SG   N   VPKGHVAVYVGE Q KRFV+PISYLNH SFQ
Sbjct: 1  MGIRL-LSLVPHAKQLLKMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQ 60

Query: 61 QLLSRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQ 94
          QLLS AEEEFGF HP+GGLTIPC ED F+DLTSRLQ
Sbjct: 61 QLLSYAEEEFGFHHPQGGLTIPCKEDTFLDLTSRLQ 95

The following BLAST results are available for this feature:

BLAST of Lsi10G004350 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SAU24_ARATH	1.9e-27	69.14	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1	[more]
SAU20_ARATH	2.8e-26	67.90	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1	[more]
SAU22_ARATH	2.8e-26	66.67	Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1	[more]
SAU23_ARATH	1.1e-25	67.50	Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1	[more]
SAU19_ARATH	4.0e-25	65.43	Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana GN=SAUR19 PE=2 SV=1	[more]

BLAST of Lsi10G004350 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LJ85_CUCSA	7.6e-47	97.89	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258640 PE=4 SV=1	[more]
A0A0A0LPI0_CUCSA	2.0e-31	76.04	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258720 PE=4 SV=1	[more]
A0A0D2PID8_GOSRA	1.3e-30	70.41	Uncharacterized protein OS=Gossypium raimondii GN=B456_001G246600 PE=4 SV=1	[more]
A0A0A0LLF1_CUCSA	8.4e-30	71.13	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258700 PE=4 SV=1	[more]
A0A0A0LIY9_CUCSA	1.9e-29	71.58	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258660 PE=4 SV=1	[more]

BLAST of Lsi10G004350 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G18080.1	1.1e-28	69.14	SAUR-like auxin-responsive protein family	[more]
AT5G18050.1	1.6e-27	66.67	SAUR-like auxin-responsive protein family	[more]
AT5G18020.1	1.6e-27	67.90	SAUR-like auxin-responsive protein family	[more]
AT5G18060.1	6.0e-27	67.50	SAUR-like auxin-responsive protein family	[more]
AT5G18010.1	2.3e-26	65.43	SAUR-like auxin-responsive protein family	[more]

BLAST of Lsi10G004350 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659115582\|ref\|XP_008457626.1\|	9.9e-48	100.00	PREDICTED: auxin-induced protein 15A-like [Cucumis melo]	[more]
gi\|778669575\|ref\|XP_011649267.1\|	1.1e-46	97.89	PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]	[more]
gi\|700206757\|gb\|KGN61876.1\|	2.9e-31	76.04	hypothetical protein Csa_2G258720 [Cucumis sativus]	[more]
gi\|659115592\|ref\|XP_008457632.1\|	1.1e-30	75.00	PREDICTED: auxin-induced protein 15A-like [Cucumis melo]	[more]
gi\|659115596\|ref\|XP_008457635.1\|	1.4e-30	75.00	PREDICTED: auxin-induced protein 15A-like [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0009733	response to auxin

Vocabulary: **INTERPRO**
Term	Definition
IPR003676	SAUR_fam

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi10G004350.1	Lsi10G004350.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 20..91 score: 7.7
None	No IPR available	PANTHER	PTHR31929	FAMILY NOT NAMED	coord: 1..93 score: 3.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi10G004350	Csa2G258640	Cucumber (Chinese Long) v2	culsiB093
Lsi10G004350	CSPI02G12880	Wild cucumber (PI 183967)	cpilsiB091
Lsi10G004350	Cucsa.382120	Cucumber (Gy14) v1	cgylsiB617
Lsi10G004350	CmaCh20G007900	Cucurbita maxima (Rimu)	cmalsiB507
Lsi10G004350	CmaCh02G003520	Cucurbita maxima (Rimu)	cmalsiB548
Lsi10G004350	CmoCh20G008010	Cucurbita moschata (Rifu)	cmolsiB491
Lsi10G004350	CmoCh02G003540	Cucurbita moschata (Rifu)	cmolsiB533
Lsi10G004350	CmoCh19G007180	Cucurbita moschata (Rifu)	cmolsiB451
Lsi10G004350	Cla016621	Watermelon (97103) v1	lsiwmB084
Lsi10G004350	Cla015869	Watermelon (97103) v1	lsiwmB079
Lsi10G004350	MELO3C013401	Melon (DHL92) v3.5.1	lsimeB064
Lsi10G004350	MELO3C020756	Melon (DHL92) v3.5.1	lsimeB054
Lsi10G004350	MELO3C020756.2	Melon (DHL92) v3.6.1	lsimedB056
Lsi10G004350	Cla97C11G210450	Watermelon (97103) v2	lsiwmbB043
Lsi10G004350	Bhi10G001532	Wax gourd	lsiwgoB080
Lsi10G004350	Cp4.1LG02g08030	Cucurbita pepo (Zucchini)	cpelsiB436
Lsi10G004350	CsaV3_2G015430	Cucumber (Chinese Long) v3	cuclsiB104

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi10G004350	Wild cucumber (PI 183967)	cpilsiB497
Lsi10G004350	Cucumber (Chinese Long) v2	culsiB489
Lsi10G004350	Watermelon (Charleston Gray)	lsiwcgB039
Lsi10G004350	Watermelon (Charleston Gray)	lsiwcgB057
Lsi10G004350	Cucumber (Gy14) v2	cgyblsiB086
Lsi10G004350	Cucumber (Gy14) v2	cgyblsiB456
Lsi10G004350	Silver-seed gourd	carlsiB390
Lsi10G004350	Silver-seed gourd	carlsiB753
Lsi10G004350	Bottle gourd (USVL1VR-Ls)	lsilsiB021
Lsi10G004350	Cucumber (Gy14) v1	cgylsiB281
Lsi10G004350	Cucurbita maxima (Rimu)	cmalsiB089
Lsi10G004350	Cucurbita maxima (Rimu)	cmalsiB466
Lsi10G004350	Cucurbita moschata (Rifu)	cmolsiB073
Lsi10G004350	Cucurbita moschata (Rifu)	cmolsiB489
Lsi10G004350	Cucurbita pepo (Zucchini)	cpelsiB220
Lsi10G004350	Cucurbita pepo (Zucchini)	cpelsiB589