Csa2G258640 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa2G258640
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Auxin-induced protein 6B; contains IPR003676 (Auxin responsive SAUR protein)
Location	Chr2 : 12549793 .. 12550210 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTTTTTTTCATTTTCCTCTTCAATCAGTTTCATCCATTTCTCCATTTTTTTTTCTCCTCAATGGGGTTTCGTCTTCCATCGTCTTTGATTCCTCAGGCCAAGCATTTGCTGAGGAGAAGCTCCGGTAATCCATCGGCGGTTCCGAAAGGTCATGTAGCAGTGTACGTCGGAGAGTTTCAGAGGAAGCGATTTGTGATTCCGATTTCGTATTTGAATCATTTTTCGTTTCAACAATTGTTGAGTCGAGCGGAGGAAGAGTTTGGATTTGATCATCCAGAAGGTGGTTTGACGATTCCTTGTGGTGAAGATGCATTTATCGACCTTACTTCAAGATTGCAAGCTTGTTAAATCCATGAAGAACTAGGAAGGAAGGATCTCGATTTTTGCCTTTGGCTTCTTCTTCTTCTTCTTCTTTC

mRNA sequence

ATGGGGTTTCGTCTTCCATCGTCTTTGATTCCTCAGGCCAAGCATTTGCTGAGGAGAAGCTCCGGTAATCCATCGGCGGTTCCGAAAGGTCATGTAGCAGTGTACGTCGGAGAGTTTCAGAGGAAGCGATTTGTGATTCCGATTTCGTATTTGAATCATTTTTCGTTTCAACAATTGTTGAGTCGAGCGGAGGAAGAGTTTGGATTTGATCATCCAGAAGGTGGTTTGACGATTCCTTGTGGTGAAGATGCATTTATCGACCTTACTTCAAGATTGCAAGCTTGTTAA

Coding sequence (CDS)

ATGGGGTTTCGTCTTCCATCGTCTTTGATTCCTCAGGCCAAGCATTTGCTGAGGAGAAGCTCCGGTAATCCATCGGCGGTTCCGAAAGGTCATGTAGCAGTGTACGTCGGAGAGTTTCAGAGGAAGCGATTTGTGATTCCGATTTCGTATTTGAATCATTTTTCGTTTCAACAATTGTTGAGTCGAGCGGAGGAAGAGTTTGGATTTGATCATCCAGAAGGTGGTTTGACGATTCCTTGTGGTGAAGATGCATTTATCGACCTTACTTCAAGATTGCAAGCTTGTTAA

Protein sequence

MGFRLPSSLIPQAKHLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHFSFQQLLSRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQAC*

Homology

[Close]

BLAST of Csa2G258640 vs. Swiss-Prot
Match: SAU24_ARATH (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 3.7e-26
Identity = 56/81 (69.14%), Postives = 66/81 (81.48%), Query Frame = 1


Query: 13 AKHLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHFSFQQLLSRAEEEFGFDHP 72
          AK +L RS+G  SA PKG +AVYVGE Q+KR+++P+SYLN  SFQ LLS++EEEFGFDHP
Sbjct: 10 AKKILSRSTGAGSAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGFDHP 69

Query: 73 EGGLTIPCGEDAFIDLTSRLQ 94
           GGLTIPC ED FI++TSRLQ
Sbjct: 70 MGGLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of Csa2G258640 vs. Swiss-Prot
Match: SAU20_ARATH (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 5.3e-25
Identity = 55/81 (67.90%), Postives = 64/81 (79.01%), Query Frame = 1


Query: 13 AKHLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHFSFQQLLSRAEEEFGFDHP 72
          AK +L RS+   SA PKG +AVYVGE Q+KR+++PISYLN  SFQ LLS++EEEFGFDHP
Sbjct: 10 AKKILSRSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFDHP 69

Query: 73 EGGLTIPCGEDAFIDLTSRLQ 94
           GGLTIPC ED FI++TSR Q
Sbjct: 70 MGGLTIPCPEDTFINVTSRFQ 90

[Close]

BLAST of Csa2G258640 vs. Swiss-Prot
Match: SAU22_ARATH (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 5.3e-25
Identity = 54/81 (66.67%), Postives = 65/81 (80.25%), Query Frame = 1


Query: 13 AKHLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHFSFQQLLSRAEEEFGFDHP 72
          AK +L RS+   SA PKG +AVYVGE Q+KR+++P+SYLN  SFQ LLS++E+EFGFDHP
Sbjct: 10 AKKILSRSTAAVSAAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDEFGFDHP 69

Query: 73 EGGLTIPCGEDAFIDLTSRLQ 94
           GGLTIPC ED FI++TSRLQ
Sbjct: 70 MGGLTIPCHEDTFINVTSRLQ 90

[Close]

BLAST of Csa2G258640 vs. Swiss-Prot
Match: SAU23_ARATH (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 1.5e-24
Identity = 54/80 (67.50%), Postives = 64/80 (80.00%), Query Frame = 1


Query: 13 AKHLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHFSFQQLLSRAEEEFGFDHP 72
          AK +L RS+   SA PKG +AVYVGE Q+KR+++P+SYLN  SFQ LLS++EEEFGFDHP
Sbjct: 10 AKKILSRSAAAVSAPPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEEFGFDHP 69

Query: 73 EGGLTIPCGEDAFIDLTSRL 93
           GGLTIPC ED FI++TSRL
Sbjct: 70 MGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of Csa2G258640 vs. Swiss-Prot
Match: SAU19_ARATH (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana GN=SAUR19 PE=2 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 7.7e-24
Identity = 53/81 (65.43%), Postives = 64/81 (79.01%), Query Frame = 1


Query: 13 AKHLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHFSFQQLLSRAEEEFGFDHP 72
          AK +L RS+   SA PKG +AVYVGE Q+KR+++P+SYL+  SFQ LLS++EEEFGF HP
Sbjct: 10 AKKILSRSTAAGSAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFAHP 69

Query: 73 EGGLTIPCGEDAFIDLTSRLQ 94
           GGLTIPC ED FI++TSRLQ
Sbjct: 70 MGGLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of Csa2G258640 vs. TrEMBL
Match: A0A0A0LJ85_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258640 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 1.2e-47
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 1


Query: 1  MGFRLPSSLIPQAKHLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHFSFQQLL 60
          MGFRLPSSLIPQAKHLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHFSFQQLL
Sbjct: 1  MGFRLPSSLIPQAKHLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHFSFQQLL 60

Query: 61 SRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQAC 96
          SRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQAC
Sbjct: 61 SRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQAC 95

[Close]

BLAST of Csa2G258640 vs. TrEMBL
Match: A0A0A0LPI0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258720 PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 6.5e-30
Identity = 72/96 (75.00%), Postives = 77/96 (80.21%), Query Frame = 1


Query: 1  MGFRLPSSLIPQAKHLLRRSSG---NPSAVPKGHVAVYVGEFQRKRFVIPISYLNHFSFQ 60
          MGFRL  SL+P AK +L+  SG   N   VPKGHVAVYVGE QRKRFV+PISYLN  SFQ
Sbjct: 1  MGFRL-LSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQ 60

Query: 61 QLLSRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQ 94
          QLLS AEEEFGF HP GGLTIPC EDAF+DLTSRLQ
Sbjct: 61 QLLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQ 95

[Close]

BLAST of Csa2G258640 vs. TrEMBL
Match: A0A0D2PID8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G246600 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 4.2e-29
Identity = 68/98 (69.39%), Postives = 80/98 (81.63%), Query Frame = 1


Query: 1  MGFRLPSSLIPQAKHLLRRSSG---NPSAVPKGHVAVYVGEFQRKRFVIPISYLNHFSFQ 60
          MGFRLP+ +I  ++ LL+  SG     S VPKGHVAVYVGE QRKRFV+PI+YLNH SF+
Sbjct: 1  MGFRLPA-VIQSSRQLLKHHSGFFRKQSDVPKGHVAVYVGEAQRKRFVVPIAYLNHPSFK 60

Query: 61 QLLSRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQAC 96
          +LL+RAEEEFGFDHP GGLTIPC EDAFI+LTS+L  C
Sbjct: 61 ELLNRAEEEFGFDHPMGGLTIPCKEDAFINLTSKLHTC 97

[Close]

BLAST of Csa2G258640 vs. TrEMBL
Match: A0A0A0LLF1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258700 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 3.6e-28
Identity = 68/97 (70.10%), Postives = 77/97 (79.38%), Query Frame = 1


Query: 1  MGFRLPSSLIPQAKHLLRRSSG---NPSAVPKGHVAVYVGEFQRKRFVIPISYLNHFSFQ 60
          MG RL  SL+P AK +L+  SG   N   VPKGHVAVYVGE QRKRFV+PISYLNH SF+
Sbjct: 1  MGIRL-LSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFK 60

Query: 61 QLLSRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQA 95
          QLL  AEEEFGF HP+GGLTIPC EDAF ++TS+LQA
Sbjct: 61 QLLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQA 96

[Close]

BLAST of Csa2G258640 vs. TrEMBL
Match: A0A0A0LIY9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258660 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 6.1e-28
Identity = 67/95 (70.53%), Postives = 75/95 (78.95%), Query Frame = 1


Query: 1  MGFRLPSSLIPQAKHLLRRSSGNPSAVPKGHVAVYVGEF--QRKRFVIPISYLNHFSFQQ 60
          MG RLPSSLI  AK +L+    N S VP+GH+AVYVGE   QRKRFV+PIS+LNH SF+Q
Sbjct: 1  MGIRLPSSLIHHAKQILKMR--NQSNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQ 60

Query: 61 LLSRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQ 94
          LLS  EEEFGF HP GGLTIPC EDAF+DLTSR Q
Sbjct: 61 LLSHVEEEFGFHHPHGGLTIPCKEDAFVDLTSRFQ 93

[Close]

BLAST of Csa2G258640 vs. TAIR10
Match: AT5G18080.1 (AT5G18080.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 118.6 bits (296), Expect = 2.1e-27
Identity = 56/81 (69.14%), Postives = 66/81 (81.48%), Query Frame = 1


Query: 13 AKHLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHFSFQQLLSRAEEEFGFDHP 72
          AK +L RS+G  SA PKG +AVYVGE Q+KR+++P+SYLN  SFQ LLS++EEEFGFDHP
Sbjct: 10 AKKILSRSTGAGSAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGFDHP 69

Query: 73 EGGLTIPCGEDAFIDLTSRLQ 94
           GGLTIPC ED FI++TSRLQ
Sbjct: 70 MGGLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of Csa2G258640 vs. TAIR10
Match: AT5G18050.1 (AT5G18050.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 114.8 bits (286), Expect = 3.0e-26
Identity = 54/81 (66.67%), Postives = 65/81 (80.25%), Query Frame = 1


Query: 13 AKHLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHFSFQQLLSRAEEEFGFDHP 72
          AK +L RS+   SA PKG +AVYVGE Q+KR+++P+SYLN  SFQ LLS++E+EFGFDHP
Sbjct: 10 AKKILSRSTAAVSAAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDEFGFDHP 69

Query: 73 EGGLTIPCGEDAFIDLTSRLQ 94
           GGLTIPC ED FI++TSRLQ
Sbjct: 70 MGGLTIPCHEDTFINVTSRLQ 90

[Close]

BLAST of Csa2G258640 vs. TAIR10
Match: AT5G18020.1 (AT5G18020.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 114.8 bits (286), Expect = 3.0e-26
Identity = 55/81 (67.90%), Postives = 64/81 (79.01%), Query Frame = 1


Query: 13 AKHLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHFSFQQLLSRAEEEFGFDHP 72
          AK +L RS+   SA PKG +AVYVGE Q+KR+++PISYLN  SFQ LLS++EEEFGFDHP
Sbjct: 10 AKKILSRSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFDHP 69

Query: 73 EGGLTIPCGEDAFIDLTSRLQ 94
           GGLTIPC ED FI++TSR Q
Sbjct: 70 MGGLTIPCPEDTFINVTSRFQ 90

[Close]

BLAST of Csa2G258640 vs. TAIR10
Match: AT5G18060.1 (AT5G18060.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 113.2 bits (282), Expect = 8.7e-26
Identity = 54/80 (67.50%), Postives = 64/80 (80.00%), Query Frame = 1


Query: 13 AKHLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHFSFQQLLSRAEEEFGFDHP 72
          AK +L RS+   SA PKG +AVYVGE Q+KR+++P+SYLN  SFQ LLS++EEEFGFDHP
Sbjct: 10 AKKILSRSAAAVSAPPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEEFGFDHP 69

Query: 73 EGGLTIPCGEDAFIDLTSRL 93
           GGLTIPC ED FI++TSRL
Sbjct: 70 MGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of Csa2G258640 vs. TAIR10
Match: AT5G18010.1 (AT5G18010.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 110.9 bits (276), Expect = 4.3e-25
Identity = 53/81 (65.43%), Postives = 64/81 (79.01%), Query Frame = 1


Query: 13 AKHLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHFSFQQLLSRAEEEFGFDHP 72
          AK +L RS+   SA PKG +AVYVGE Q+KR+++P+SYL+  SFQ LLS++EEEFGF HP
Sbjct: 10 AKKILSRSTAAGSAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFAHP 69

Query: 73 EGGLTIPCGEDAFIDLTSRLQ 94
           GGLTIPC ED FI++TSRLQ
Sbjct: 70 MGGLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of Csa2G258640 vs. NCBI nr
Match: gi|778669575|ref|XP_011649267.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus])

HSP 1 Score: 196.8 bits (499), Expect = 1.7e-47
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 1


Query: 1  MGFRLPSSLIPQAKHLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHFSFQQLL 60
          MGFRLPSSLIPQAKHLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHFSFQQLL
Sbjct: 1  MGFRLPSSLIPQAKHLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHFSFQQLL 60

Query: 61 SRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQAC 96
          SRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQAC
Sbjct: 61 SRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQAC 95

[Close]

BLAST of Csa2G258640 vs. NCBI nr
Match: gi|659115582|ref|XP_008457626.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 191.4 bits (485), Expect = 7.1e-46
Identity = 93/95 (97.89%), Postives = 93/95 (97.89%), Query Frame = 1


Query: 1  MGFRLPSSLIPQAKHLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHFSFQQLL 60
          MGFRLPSSLIPQAK LLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNH SFQQLL
Sbjct: 1  MGFRLPSSLIPQAKQLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLL 60

Query: 61 SRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQAC 96
          SRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQAC
Sbjct: 61 SRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQAC 95

[Close]

BLAST of Csa2G258640 vs. NCBI nr
Match: gi|700206757|gb|KGN61876.1| (hypothetical protein Csa_2G258720 [Cucumis sativus])

HSP 1 Score: 137.9 bits (346), Expect = 9.4e-30
Identity = 72/96 (75.00%), Postives = 77/96 (80.21%), Query Frame = 1


Query: 1  MGFRLPSSLIPQAKHLLRRSSG---NPSAVPKGHVAVYVGEFQRKRFVIPISYLNHFSFQ 60
          MGFRL  SL+P AK +L+  SG   N   VPKGHVAVYVGE QRKRFV+PISYLN  SFQ
Sbjct: 1  MGFRL-LSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQ 60

Query: 61 QLLSRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQ 94
          QLLS AEEEFGF HP GGLTIPC EDAF+DLTSRLQ
Sbjct: 61 QLLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQ 95

[Close]

BLAST of Csa2G258640 vs. NCBI nr
Match: gi|659115592|ref|XP_008457632.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 136.0 bits (341), Expect = 3.6e-29
Identity = 71/96 (73.96%), Postives = 77/96 (80.21%), Query Frame = 1


Query: 1  MGFRLPSSLIPQAKHLLRRSSG---NPSAVPKGHVAVYVGEFQRKRFVIPISYLNHFSFQ 60
          MG RL  SL+P AK +L+  SG   N   VPKGHVAVYVGE QRKRFV+PISYLN  SFQ
Sbjct: 1  MGIRL-LSLVPHAKQILKMQSGFTKNRLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQ 60

Query: 61 QLLSRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQ 94
          QLL+RAEEEFGF HP GGLTIPC EDAF+DLTSRLQ
Sbjct: 61 QLLNRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQ 95

[Close]

BLAST of Csa2G258640 vs. NCBI nr
Match: gi|659115596|ref|XP_008457635.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 135.6 bits (340), Expect = 4.7e-29
Identity = 71/96 (73.96%), Postives = 76/96 (79.17%), Query Frame = 1


Query: 1  MGFRLPSSLIPQAKHLLRRSSG---NPSAVPKGHVAVYVGEFQRKRFVIPISYLNHFSFQ 60
          MG RL  SL+P AK LL+  SG   N   VPKGHVAVYVGE Q KRFV+PISYLNH SFQ
Sbjct: 1  MGIRL-LSLVPHAKQLLKMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQ 60

Query: 61 QLLSRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQ 94
          QLLS AEEEFGF HP+GGLTIPC ED F+DLTSRLQ
Sbjct: 61 QLLSYAEEEFGFHHPQGGLTIPCKEDTFLDLTSRLQ 95

The following BLAST results are available for this feature:

BLAST of Csa2G258640 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SAU24_ARATH	3.7e-26	69.14	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1	[more]
SAU20_ARATH	5.3e-25	67.90	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1	[more]
SAU22_ARATH	5.3e-25	66.67	Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1	[more]
SAU23_ARATH	1.5e-24	67.50	Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1	[more]
SAU19_ARATH	7.7e-24	65.43	Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana GN=SAUR19 PE=2 SV=1	[more]

BLAST of Csa2G258640 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LJ85_CUCSA	1.2e-47	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258640 PE=4 SV=1	[more]
A0A0A0LPI0_CUCSA	6.5e-30	75.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258720 PE=4 SV=1	[more]
A0A0D2PID8_GOSRA	4.2e-29	69.39	Uncharacterized protein OS=Gossypium raimondii GN=B456_001G246600 PE=4 SV=1	[more]
A0A0A0LLF1_CUCSA	3.6e-28	70.10	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258700 PE=4 SV=1	[more]
A0A0A0LIY9_CUCSA	6.1e-28	70.53	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258660 PE=4 SV=1	[more]

BLAST of Csa2G258640 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G18080.1	2.1e-27	69.14	SAUR-like auxin-responsive protein family	[more]
AT5G18050.1	3.0e-26	66.67	SAUR-like auxin-responsive protein family	[more]
AT5G18020.1	3.0e-26	67.90	SAUR-like auxin-responsive protein family	[more]
AT5G18060.1	8.7e-26	67.50	SAUR-like auxin-responsive protein family	[more]
AT5G18010.1	4.3e-25	65.43	SAUR-like auxin-responsive protein family	[more]

BLAST of Csa2G258640 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778669575\|ref\|XP_011649267.1\|	1.7e-47	100.00	PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]	[more]
gi\|659115582\|ref\|XP_008457626.1\|	7.1e-46	97.89	PREDICTED: auxin-induced protein 15A-like [Cucumis melo]	[more]
gi\|700206757\|gb\|KGN61876.1\|	9.4e-30	75.00	hypothetical protein Csa_2G258720 [Cucumis sativus]	[more]
gi\|659115592\|ref\|XP_008457632.1\|	3.6e-29	73.96	PREDICTED: auxin-induced protein 15A-like [Cucumis melo]	[more]
gi\|659115596\|ref\|XP_008457635.1\|	4.7e-29	73.96	PREDICTED: auxin-induced protein 15A-like [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003676	SAUR_fam

Vocabulary: **Biological Process**
Term	Definition
GO:0009733	response to auxin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa2G258640.1	Csa2G258640.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 20..91 score: 1.1
None	No IPR available	PANTHER	PTHR31929	FAMILY NOT NAMED	coord: 1..93 score: 2.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa2G258640	Cla016621	Watermelon (97103) v1	cuwmB155
Csa2G258640	MELO3C020767	Melon (DHL92) v3.5.1	cumeB098
Csa2G258640	Lsi10G004350	Bottle gourd (USVL1VR-Ls)	culsiB093
Csa2G258640	MELO3C020756.2	Melon (DHL92) v3.6.1	cumedB089
Csa2G258640	Cla97C11G210450	Watermelon (97103) v2	cuwmbB110
Csa2G258640	Bhi10G001532	Wax gourd	cuwgoB182
Csa2G258640	CSPI02G12880	Wild cucumber (PI 183967)	cpicuB065
Csa2G258640	CmaCh02G003520	Cucurbita maxima (Rimu)	cmacuB588
Csa2G258640	CmaCh20G007900	Cucurbita maxima (Rimu)	cmacuB542
Csa2G258640	CmaCh20G007780	Cucurbita maxima (Rimu)	cmacuB541
Csa2G258640	CmoCh02G003540	Cucurbita moschata (Rifu)	cmocuB577

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa2G258640	Cucumber (Chinese Long) v2	cucuB077
Csa2G258640	Cucumber (Gy14) v1	cgycuB257
Csa2G258640	Cucurbita moschata (Rifu)	cmocuB531
Csa2G258640	Watermelon (Charleston Gray)	cuwcgB104
Csa2G258640	Cucurbita pepo (Zucchini)	cpecuB267
Csa2G258640	Cucurbita pepo (Zucchini)	cpecuB540
Csa2G258640	Cucurbita pepo (Zucchini)	cpecuB704
Csa2G258640	Cucumber (Gy14) v2	cgybcuB056
Csa2G258640	Cucumber (Gy14) v2	cgybcuB295
Csa2G258640	Melon (DHL92) v3.6.1	cumedB087
Csa2G258640	Silver-seed gourd	carcuB0341
Csa2G258640	Silver-seed gourd	carcuB0463
Csa2G258640	Silver-seed gourd	carcuB0838