CmoCh19G007180 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh19G007180
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	SAUR-like auxin-responsive protein family
Location	Cmo_Chr19 : 7510929 .. 7511186 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGATTCCGCTTGATAAACAGCCCTAGAAAATCGTCATCGACTGTTCCGAAGGGGTTTTTCGCCGTGTACGTCGGAGAGACCCAAAAGAGACGACATGTGATTCCGATTTCTTACTTGAAGCATCCGTCGTTTCAAGATTTGTTGAGTAAAGCCGAAGAAGAGTTCGGATTCGATCATCCGATGGGCGGCTTGACGATCCCTTGCAACGAAGATGTGTTCTTCGAAGTCACTTCTCGATTGGCGGCTAATTGTTGA

mRNA sequence

ATGGGATTCCGCTTGATAAACAGCCCTAGAAAATCGTCATCGACTGTTCCGAAGGGGTTTTTCGCCGTGTACGTCGGAGAGACCCAAAAGAGACGACATGTGATTCCGATTTCTTACTTGAAGCATCCGTCGTTTCAAGATTTGTTGAGTAAAGCCGAAGAAGAGTTCGGATTCGATCATCCGATGGGCGGCTTGACGATCCCTTGCAACGAAGATGTGTTCTTCGAAGTCACTTCTCGATTGGCGGCTAATTGTTGA

Coding sequence (CDS)

ATGGGATTCCGCTTGATAAACAGCCCTAGAAAATCGTCATCGACTGTTCCGAAGGGGTTTTTCGCCGTGTACGTCGGAGAGACCCAAAAGAGACGACATGTGATTCCGATTTCTTACTTGAAGCATCCGTCGTTTCAAGATTTGTTGAGTAAAGCCGAAGAAGAGTTCGGATTCGATCATCCGATGGGCGGCTTGACGATCCCTTGCAACGAAGATGTGTTCTTCGAAGTCACTTCTCGATTGGCGGCTAATTGTTGA

Homology

[Close]

BLAST of CmoCh19G007180 vs. Swiss-Prot
Match: SAU21_ARATH (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana GN=SAUR21 PE=2 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 4.3e-26
Identity = 52/72 (72.22%), Postives = 61/72 (84.72%), Query Frame = 1


Query: 10 RKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPC 69
          R ++S  PKGF AVYVGE+QK+R+++P+SYL  PSFQ LLSK+EEEFGFDHPMGGLTIPC
Sbjct: 16 RSTASAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFDHPMGGLTIPC 75

Query: 70 NEDVFFEVTSRL 82
           ED F  VTSRL
Sbjct: 76 PEDTFINVTSRL 87

[Close]

BLAST of CmoCh19G007180 vs. Swiss-Prot
Match: SAU24_ARATH (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 7.3e-26
Identity = 51/78 (65.38%), Postives = 63/78 (80.77%), Query Frame = 1


Query: 4  RLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMG 63
          ++++    + S  PKGF AVYVGE+QK+R+++P+SYL  PSFQ LLSK+EEEFGFDHPMG
Sbjct: 12 KILSRSTGAGSAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGFDHPMG 71

Query: 64 GLTIPCNEDVFFEVTSRL 82
          GLTIPC ED F  VTSRL
Sbjct: 72 GLTIPCPEDTFINVTSRL 89

[Close]

BLAST of CmoCh19G007180 vs. Swiss-Prot
Match: SAU20_ARATH (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 9.5e-26
Identity = 51/77 (66.23%), Postives = 63/77 (81.82%), Query Frame = 1


Query: 4  RLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMG 63
          ++++    ++S  PKGF AVYVGE+QK+R+++PISYL  PSFQ LLSK+EEEFGFDHPMG
Sbjct: 12 KILSRSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFDHPMG 71

Query: 64 GLTIPCNEDVFFEVTSR 81
          GLTIPC ED F  VTSR
Sbjct: 72 GLTIPCPEDTFINVTSR 88

[Close]

BLAST of CmoCh19G007180 vs. Swiss-Prot
Match: SAU22_ARATH (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 1.2e-25
Identity = 50/78 (64.10%), Postives = 64/78 (82.05%), Query Frame = 1


Query: 4  RLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMG 63
          ++++    + S  PKGF AVYVGE+QK+R+++P+SYL  PSFQ LLSK+E+EFGFDHPMG
Sbjct: 12 KILSRSTAAVSAAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDEFGFDHPMG 71

Query: 64 GLTIPCNEDVFFEVTSRL 82
          GLTIPC+ED F  VTSRL
Sbjct: 72 GLTIPCHEDTFINVTSRL 89

[Close]

BLAST of CmoCh19G007180 vs. Swiss-Prot
Match: SAU23_ARATH (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 2.1e-25
Identity = 51/78 (65.38%), Postives = 63/78 (80.77%), Query Frame = 1


Query: 4  RLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMG 63
          ++++    + S  PKGF AVYVGE+QK+R+++P+SYL  PSFQ LLSK+EEEFGFDHPMG
Sbjct: 12 KILSRSAAAVSAPPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEEFGFDHPMG 71

Query: 64 GLTIPCNEDVFFEVTSRL 82
          GLTIPC ED F  VTSRL
Sbjct: 72 GLTIPCPEDTFINVTSRL 89

[Close]

BLAST of CmoCh19G007180 vs. TrEMBL
Match: A0A0A0K4I7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G008440 PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 2.1e-40
Identity = 83/85 (97.65%), Postives = 83/85 (97.65%), Query Frame = 1


Query: 1  MGFRLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDH 60
          MGFRLINSPRKSSSTVPKGF AVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDH
Sbjct: 1  MGFRLINSPRKSSSTVPKGFLAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDH 60

Query: 61 PMGGLTIPCNEDVFFEVTSRLAANC 86
          PMGGLTIPCNEDVFFEVTSRL ANC
Sbjct: 61 PMGGLTIPCNEDVFFEVTSRL-ANC 84

[Close]

BLAST of CmoCh19G007180 vs. TrEMBL
Match: A0A067K719_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19614 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 6.6e-26
Identity = 55/78 (70.51%), Postives = 64/78 (82.05%), Query Frame = 1


Query: 4  RLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMG 63
          R  +    SS  VPKGF AVY+GET+K+R+++PISYL  PSFQDLLSKAEEE+GFDHPMG
Sbjct: 16 RSTSKSSSSSPNVPKGFLAVYIGETEKKRYLVPISYLNEPSFQDLLSKAEEEYGFDHPMG 75

Query: 64 GLTIPCNEDVFFEVTSRL 82
          GLTIPC ED F +VTSRL
Sbjct: 76 GLTIPCGEDTFIDVTSRL 93

[Close]

BLAST of CmoCh19G007180 vs. TrEMBL
Match: A0A067JXR9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19618 PE=4 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 8.6e-26
Identity = 55/79 (69.62%), Postives = 64/79 (81.01%), Query Frame = 1


Query: 4  RLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMG 63
          R  N    SSS VPKGF AVY+GE +K+R+++PISYL  PSFQDLLSKAEEE+GFDHPMG
Sbjct: 16 RSANKASSSSSNVPKGFLAVYIGEKEKKRYLVPISYLNEPSFQDLLSKAEEEYGFDHPMG 75

Query: 64 GLTIPCNEDVFFEVTSRLA 83
          GLTIPC ED F +VTS L+
Sbjct: 76 GLTIPCREDTFIDVTSSLS 94

[Close]

BLAST of CmoCh19G007180 vs. TrEMBL
Match: D7SPQ7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0023g00490 PE=4 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 8.6e-26
Identity = 54/82 (65.85%), Postives = 69/82 (84.15%), Query Frame = 1


Query: 3  FRLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPM 62
          F+L +   ++ + VPKG+FAVYVGE +KRRHV+PISYL HPSF+ LL +AEEEFGF+HPM
Sbjct: 15 FKLQSYLSRNQAEVPKGYFAVYVGEVEKRRHVVPISYLNHPSFRSLLCQAEEEFGFNHPM 74

Query: 63 GGLTIPCNEDVFFEVTSRLAAN 85
          GGLTIPCNED F ++T+RL A+
Sbjct: 75 GGLTIPCNEDAFADLTTRLNAS 96

[Close]

BLAST of CmoCh19G007180 vs. TrEMBL
Match: M4CD44_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 1.9e-25
Identity = 53/75 (70.67%), Postives = 66/75 (88.00%), Query Frame = 1


Query: 7  NSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLT 66
          ++ +++SS+ PKGF AVYVGE+QK+R+V+PISYL  PSFQ LLSK+EEEFGFDHPMGGLT
Sbjct: 22 STSKRASSSAPKGFLAVYVGESQKKRYVVPISYLSQPSFQALLSKSEEEFGFDHPMGGLT 81

Query: 67 IPCNEDVFFEVTSRL 82
          IPC ED+F  +TSRL
Sbjct: 82 IPCPEDIFINITSRL 96

[Close]

BLAST of CmoCh19G007180 vs. TAIR10
Match: AT5G18030.1 (AT5G18030.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 118.2 bits (295), Expect = 2.4e-27
Identity = 52/72 (72.22%), Postives = 61/72 (84.72%), Query Frame = 1


Query: 10 RKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPC 69
          R ++S  PKGF AVYVGE+QK+R+++P+SYL  PSFQ LLSK+EEEFGFDHPMGGLTIPC
Sbjct: 16 RSTASAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFDHPMGGLTIPC 75

Query: 70 NEDVFFEVTSRL 82
           ED F  VTSRL
Sbjct: 76 PEDTFINVTSRL 87

[Close]

BLAST of CmoCh19G007180 vs. TAIR10
Match: AT5G18080.1 (AT5G18080.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 117.5 bits (293), Expect = 4.1e-27
Identity = 51/78 (65.38%), Postives = 63/78 (80.77%), Query Frame = 1


Query: 4  RLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMG 63
          ++++    + S  PKGF AVYVGE+QK+R+++P+SYL  PSFQ LLSK+EEEFGFDHPMG
Sbjct: 12 KILSRSTGAGSAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGFDHPMG 71

Query: 64 GLTIPCNEDVFFEVTSRL 82
          GLTIPC ED F  VTSRL
Sbjct: 72 GLTIPCPEDTFINVTSRL 89

[Close]

BLAST of CmoCh19G007180 vs. TAIR10
Match: AT5G18020.1 (AT5G18020.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 117.1 bits (292), Expect = 5.4e-27
Identity = 51/77 (66.23%), Postives = 63/77 (81.82%), Query Frame = 1


Query: 4  RLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMG 63
          ++++    ++S  PKGF AVYVGE+QK+R+++PISYL  PSFQ LLSK+EEEFGFDHPMG
Sbjct: 12 KILSRSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFDHPMG 71

Query: 64 GLTIPCNEDVFFEVTSR 81
          GLTIPC ED F  VTSR
Sbjct: 72 GLTIPCPEDTFINVTSR 88

[Close]

BLAST of CmoCh19G007180 vs. TAIR10
Match: AT5G18050.1 (AT5G18050.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 116.7 bits (291), Expect = 7.0e-27
Identity = 50/78 (64.10%), Postives = 64/78 (82.05%), Query Frame = 1


Query: 4  RLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMG 63
          ++++    + S  PKGF AVYVGE+QK+R+++P+SYL  PSFQ LLSK+E+EFGFDHPMG
Sbjct: 12 KILSRSTAAVSAAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDEFGFDHPMG 71

Query: 64 GLTIPCNEDVFFEVTSRL 82
          GLTIPC+ED F  VTSRL
Sbjct: 72 GLTIPCHEDTFINVTSRL 89

[Close]

BLAST of CmoCh19G007180 vs. TAIR10
Match: AT5G18060.1 (AT5G18060.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 115.9 bits (289), Expect = 1.2e-26
Identity = 51/78 (65.38%), Postives = 63/78 (80.77%), Query Frame = 1


Query: 4  RLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMG 63
          ++++    + S  PKGF AVYVGE+QK+R+++P+SYL  PSFQ LLSK+EEEFGFDHPMG
Sbjct: 12 KILSRSAAAVSAPPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEEFGFDHPMG 71

Query: 64 GLTIPCNEDVFFEVTSRL 82
          GLTIPC ED F  VTSRL
Sbjct: 72 GLTIPCPEDTFINVTSRL 89

[Close]

BLAST of CmoCh19G007180 vs. NCBI nr
Match: gi|778722813|ref|XP_011658572.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus])

HSP 1 Score: 172.6 bits (436), Expect = 3.0e-40
Identity = 83/85 (97.65%), Postives = 83/85 (97.65%), Query Frame = 1


Query: 1  MGFRLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDH 60
          MGFRLINSPRKSSSTVPKGF AVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDH
Sbjct: 1  MGFRLINSPRKSSSTVPKGFLAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDH 60

Query: 61 PMGGLTIPCNEDVFFEVTSRLAANC 86
          PMGGLTIPCNEDVFFEVTSRL ANC
Sbjct: 61 PMGGLTIPCNEDVFFEVTSRL-ANC 84

[Close]

BLAST of CmoCh19G007180 vs. NCBI nr
Match: gi|659094348|ref|XP_008448012.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 168.7 bits (426), Expect = 4.4e-39
Identity = 81/85 (95.29%), Postives = 82/85 (96.47%), Query Frame = 1


Query: 1  MGFRLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDH 60
          MGFRLINSPRKSSSTVPKGF AVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDH
Sbjct: 1  MGFRLINSPRKSSSTVPKGFLAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDH 60

Query: 61 PMGGLTIPCNEDVFFEVTSRLAANC 86
          PMGGLTIPCNEDVF +VTSRL ANC
Sbjct: 61 PMGGLTIPCNEDVFLKVTSRL-ANC 84

[Close]

BLAST of CmoCh19G007180 vs. NCBI nr
Match: gi|802707914|ref|XP_012084407.1| (PREDICTED: auxin-induced protein 15A-like [Jatropha curcas])

HSP 1 Score: 124.4 bits (311), Expect = 9.5e-26
Identity = 55/78 (70.51%), Postives = 64/78 (82.05%), Query Frame = 1


Query: 4  RLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMG 63
          R  +    SS  VPKGF AVY+GET+K+R+++PISYL  PSFQDLLSKAEEE+GFDHPMG
Sbjct: 16 RSTSKSSSSSPNVPKGFLAVYIGETEKKRYLVPISYLNEPSFQDLLSKAEEEYGFDHPMG 75

Query: 64 GLTIPCNEDVFFEVTSRL 82
          GLTIPC ED F +VTSRL
Sbjct: 76 GLTIPCGEDTFIDVTSRL 93

[Close]

BLAST of CmoCh19G007180 vs. NCBI nr
Match: gi|297735274|emb|CBI17636.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 124.0 bits (310), Expect = 1.2e-25
Identity = 54/82 (65.85%), Postives = 69/82 (84.15%), Query Frame = 1


Query: 3  FRLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPM 62
          F+L +   ++ + VPKG+FAVYVGE +KRRHV+PISYL HPSF+ LL +AEEEFGF+HPM
Sbjct: 15 FKLQSYLSRNQAEVPKGYFAVYVGEVEKRRHVVPISYLNHPSFRSLLCQAEEEFGFNHPM 74

Query: 63 GGLTIPCNEDVFFEVTSRLAAN 85
          GGLTIPCNED F ++T+RL A+
Sbjct: 75 GGLTIPCNEDAFADLTTRLNAS 96

[Close]

BLAST of CmoCh19G007180 vs. NCBI nr
Match: gi|731387422|ref|XP_002271994.2| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC100256454 [Vitis vinifera])

HSP 1 Score: 124.0 bits (310), Expect = 1.2e-25
Identity = 54/82 (65.85%), Postives = 69/82 (84.15%), Query Frame = 1


Query: 3  FRLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPM 62
          F+L +   ++ + VPKG+FAVYVGE +KRRHV+PISYL HPSF+ LL +AEEEFGF+HPM
Sbjct: 15 FKLQSYLSRNQAEVPKGYFAVYVGEVEKRRHVVPISYLNHPSFRSLLCQAEEEFGFNHPM 74

Query: 63 GGLTIPCNEDVFFEVTSRLAAN 85
          GGLTIPCNED F ++T+RL A+
Sbjct: 75 GGLTIPCNEDAFADLTTRLNAS 96

The following BLAST results are available for this feature:

BLAST of CmoCh19G007180 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SAU21_ARATH	4.3e-26	72.22	Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana GN=SAUR21 PE=2 SV=1	[more]
SAU24_ARATH	7.3e-26	65.38	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1	[more]
SAU20_ARATH	9.5e-26	66.23	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1	[more]
SAU22_ARATH	1.2e-25	64.10	Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1	[more]
SAU23_ARATH	2.1e-25	65.38	Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1	[more]

BLAST of CmoCh19G007180 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K4I7_CUCSA	2.1e-40	97.65	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G008440 PE=4 SV=1	[more]
A0A067K719_JATCU	6.6e-26	70.51	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19614 PE=4 SV=1	[more]
A0A067JXR9_JATCU	8.6e-26	69.62	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19618 PE=4 SV=1	[more]
D7SPQ7_VITVI	8.6e-26	65.85	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0023g00490 PE=4 SV=...	[more]
M4CD44_BRARP	1.9e-25	70.67	Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1	[more]

BLAST of CmoCh19G007180 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G18030.1	2.4e-27	72.22	SAUR-like auxin-responsive protein family	[more]
AT5G18080.1	4.1e-27	65.38	SAUR-like auxin-responsive protein family	[more]
AT5G18020.1	5.4e-27	66.23	SAUR-like auxin-responsive protein family	[more]
AT5G18050.1	7.0e-27	64.10	SAUR-like auxin-responsive protein family	[more]
AT5G18060.1	1.2e-26	65.38	SAUR-like auxin-responsive protein family	[more]

BLAST of CmoCh19G007180 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778722813\|ref\|XP_011658572.1\|	3.0e-40	97.65	PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]	[more]
gi\|659094348\|ref\|XP_008448012.1\|	4.4e-39	95.29	PREDICTED: auxin-induced protein 15A-like [Cucumis melo]	[more]
gi\|802707914\|ref\|XP_012084407.1\|	9.5e-26	70.51	PREDICTED: auxin-induced protein 15A-like [Jatropha curcas]	[more]
gi\|297735274\|emb\|CBI17636.3\|	1.2e-25	65.85	unnamed protein product [Vitis vinifera]	[more]
gi\|731387422\|ref\|XP_002271994.2\|	1.2e-25	65.85	PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC100256454 [Vitis vini...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003676	SAUR_fam

Vocabulary: **Biological Process**
Term	Definition
GO:0009733	response to auxin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh19G007180.1	CmoCh19G007180.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 11..80 score: 2.1
None	No IPR available	PANTHER	PTHR31929	FAMILY NOT NAMED	coord: 1..81 score: 9.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh19G007180	CmaCh19G007090	Cucurbita maxima (Rimu)	cmacmoB508
CmoCh19G007180	Cla015869	Watermelon (97103) v1	cmowmB496
CmoCh19G007180	Csa7G008440	Cucumber (Chinese Long) v2	cmocuB518
CmoCh19G007180	MELO3C013401	Melon (DHL92) v3.5.1	cmomeB453
CmoCh19G007180	Lsi11G011560	Bottle gourd (USVL1VR-Ls)	cmolsiB457
CmoCh19G007180	Lsi10G004350	Bottle gourd (USVL1VR-Ls)	cmolsiB451
CmoCh19G007180	MELO3C034602.2	Melon (DHL92) v3.6.1	cmomedB512
CmoCh19G007180	MELO3C013396.2	Melon (DHL92) v3.6.1	cmomedB522
CmoCh19G007180	CsaV3_7G000580	Cucumber (Chinese Long) v3	cmocucB0622
CmoCh19G007180	CsaV3_2G015430	Cucumber (Chinese Long) v3	cmocucB0590
CmoCh19G007180	Cla97C11G210450	Watermelon (97103) v2	cmowmbB506
CmoCh19G007180	Cla97C02G031300	Watermelon (97103) v2	cmowmbB512
CmoCh19G007180	Bhi05G001524	Wax gourd	cmowgoB0653
CmoCh19G007180	Bhi10G001533	Wax gourd	cmowgoB0665
CmoCh19G007180	CsGy2G012950	Cucumber (Gy14) v2	cgybcmoB202

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh19G007180	Cucurbita moschata (Rifu)	cmocmoB108
CmoCh19G007180	Cucurbita moschata (Rifu)	cmocmoB382
CmoCh19G007180	Cucurbita moschata (Rifu)	cmocmoB388
CmoCh19G007180	Cucumber (Gy14) v1	cgycmoB1050
CmoCh19G007180	Cucurbita maxima (Rimu)	cmacmoB145
CmoCh19G007180	Cucurbita maxima (Rimu)	cmacmoB548
CmoCh19G007180	Cucurbita maxima (Rimu)	cmacmoB599
CmoCh19G007180	Wild cucumber (PI 183967)	cmocpiB500
CmoCh19G007180	Wild cucumber (PI 183967)	cmocpiB524
CmoCh19G007180	Cucumber (Chinese Long) v2	cmocuB495
CmoCh19G007180	Watermelon (Charleston Gray)	cmowcgB459
CmoCh19G007180	Watermelon (97103) v1	cmowmB499
CmoCh19G007180	Cucurbita pepo (Zucchini)	cmocpeB481
CmoCh19G007180	Cucurbita pepo (Zucchini)	cmocpeB484
CmoCh19G007180	Cucurbita pepo (Zucchini)	cmocpeB492
CmoCh19G007180	Cucurbita pepo (Zucchini)	cmocpeB499
CmoCh19G007180	Cucumber (Gy14) v2	cgybcmoB205
CmoCh19G007180	Cucumber (Gy14) v2	cgybcmoB927
CmoCh19G007180	Melon (DHL92) v3.6.1	cmomedB527
CmoCh19G007180	Silver-seed gourd	carcmoB0433
CmoCh19G007180	Silver-seed gourd	carcmoB1316
CmoCh19G007180	Cucumber (Chinese Long) v3	cmocucB0594