Lsi09G009460 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi09G009460
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Carbon-sulfur lyase
Location	chr09 : 12101663 .. 12103003 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAAGGTACTAATATTAACTAATATATTCTCTTCTTTAATATGGCAGTATGGTTTTTTTTTTTTTTTTTTTTCTTTTTCTTTGACAACAATTATGTATGCATGGTACTTTTCTTTGAAGTCTCAAATATATATAGGGAGAGGTTTAATATACAAGCAGGGGCAAATTATAAAAGCTTATACCCTCCAACTTTCAATGGTAAAAATTGAGCCCTCCAACTTATACAAATGTTAAAATAAGACCTTAAAAAACTTACATAGTTGTAGAAATTGTAATAATTGTATAAAGTTTGAAGGTTCAATTTTTATCATTTGAAGTCAAAGTTCTACCACTATTATAAGTTTAAGGGTCTAATTTTAATACTTATTTAAGTTTGAGGATGTAATTGCAACTACCTTGAAATGGTGGCTTTGCCTACAAGAAAGCATAAACAATAAGTTTAGTGTTTAAATTGATTTTGATTTGCATTTATTTGGTTAACCCAATGAATTTTATATCTAATAGATTAATTAATTTTTAATCTTTTTGTTACACCATCTATTAGACATAAAATCAAAGAAAATTTTCAAAAATAGAAAAAGAAGGAAAACTATTTACACAAAATAACAAAATTTTTAGATAGTTGTGATCAACGCTGATAGAAGTCGATCAAGGTTTATCGGTGATAGAAATGATAGAAGTCTATCATTAATAGATGCAGATAGAAGTTTATCTATCAGTAATTTTTTTTTCTATTTTATGTAAATACTTTGACATTTTTTTCTAATGGTGAAAATTTTCCTAAAATCAAAGTTTTTGAAATTTAGTAAGCATCTTTAATTTTAAAGTGTGATTATTATTTTGTAATATATATATATATATATATATATATTTAAATGAAGATATTAATTCCACCAAGCTAAGAGGGTAGTTGAAGAAAGGGGAGAGGAGAGGAGATTATTATTGAAGATGATGGTAGTCCACAGGGGTGGATGCCACTGCAAGAGAATAAGATGGGAAGTTGAAGCAGCAAGCAGTGTCACAGCTTGGGATTGCAACTGTTCAGATTGCTCCATGAGAGGCAATACACATTTCACTGTGCCTTCTCAACATTTTAAGCTTTTGGGAAACTCAGATAAGTTTACTTCAACCTATACTTTTGGGACACATATTGCAAAGCATACATTTTGCAAAGTTTGTGGGATCACTTCCTTTTATCATTCACGCTCAACTCCAGATGGGGTTTCAGTTAGTTTCAGGTGTGTTGATCCAGGCACGTTGAACCATGTTGAGATTAACAATTTTGATGGTAAAAATTGGGAGCAAGCTCATCATCATCATCATCCCTCAAAAAACTAG

mRNA sequence

ATGGCGAAGAGGGTAGTTGAAGAAAGGGGAGAGGAGAGGAGATTATTATTGAAGATGATGGTAGTCCACAGGGGTGGATGCCACTGCAAGAGAATAAGATGGGAAGTTGAAGCAGCAAGCAGTGTCACAGCTTGGGATTGCAACTGTTCAGATTGCTCCATGAGAGGCAATACACATTTCACTGTGCCTTCTCAACATTTTAAGCTTTTGGGAAACTCAGATAAGTTTACTTCAACCTATACTTTTGGGACACATATTGCAAAGCATACATTTTGCAAAGTTTGTGGGATCACTTCCTTTTATCATTCACGCTCAACTCCAGATGGGGTTTCAGTTAGTTTCAGGTGTGTTGATCCAGGCACGTTGAACCATGTTGAGATTAACAATTTTGATGGTAAAAATTGGGAGCAAGCTCATCATCATCATCATCCCTCAAAAAACTAG

Coding sequence (CDS)

ATGGCGAAGAGGGTAGTTGAAGAAAGGGGAGAGGAGAGGAGATTATTATTGAAGATGATGGTAGTCCACAGGGGTGGATGCCACTGCAAGAGAATAAGATGGGAAGTTGAAGCAGCAAGCAGTGTCACAGCTTGGGATTGCAACTGTTCAGATTGCTCCATGAGAGGCAATACACATTTCACTGTGCCTTCTCAACATTTTAAGCTTTTGGGAAACTCAGATAAGTTTACTTCAACCTATACTTTTGGGACACATATTGCAAAGCATACATTTTGCAAAGTTTGTGGGATCACTTCCTTTTATCATTCACGCTCAACTCCAGATGGGGTTTCAGTTAGTTTCAGGTGTGTTGATCCAGGCACGTTGAACCATGTTGAGATTAACAATTTTGATGGTAAAAATTGGGAGCAAGCTCATCATCATCATCATCCCTCAAAAAACTAG

Protein sequence

MAKRVVEERGEERRLLLKMMVVHRGGCHCKRIRWEVEAASSVTAWDCNCSDCSMRGNTHFTVPSQHFKLLGNSDKFTSTYTFGTHIAKHTFCKVCGITSFYHSRSTPDGVSVSFRCVDPGTLNHVEINNFDGKNWEQAHHHHHPSKN

Homology

[Close]

BLAST of Lsi09G009460 vs. Swiss-Prot
Match: CENPV_MOUSE (Centromere protein V OS=Mus musculus GN=Cenpv PE=1 SV=2)

HSP 1 Score: 131.7 bits (330), Expect = 6.4e-30
Identity = 61/128 (47.66%), Postives = 81/128 (63.28%), Query Frame = 1


Query: 20  MVVHRGGCHCKRIRWEVEAASSVTAWDCNCSDCSMRGNTHFTVPSQHFKLLGNSDKFTST 79
           +V H GGCHC  +R+EV A++ +  +DCNCS C  + N HF VP+  FKLL  ++  T T
Sbjct: 122 LVKHTGGCHCGAVRFEVWASADLHIFDCNCSICKKKQNRHFIVPASRFKLLKGAESIT-T 181

Query: 80  YTFGTHIAKHTFCKVCGITSFYHSRSTPDGVSVSFRCVDPGTLNHVEINNFDGKNWEQAH 139
           YTF TH A+HTFCK CG+ SFY  RS P G  ++  C+D GT+  V    F+G +WE+A 
Sbjct: 182 YTFNTHKAQHTFCKRCGVQSFYTPRSNPGGFGIAPHCLDEGTVRSVVTEEFNGSDWERAM 241

Query: 140 HHHHPSKN 148
             H   KN
Sbjct: 242 KEHKTIKN 248

[Close]

BLAST of Lsi09G009460 vs. Swiss-Prot
Match: CENPV_HUMAN (Centromere protein V OS=Homo sapiens GN=CENPV PE=1 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 1.9e-29
Identity = 60/128 (46.88%), Postives = 81/128 (63.28%), Query Frame = 1


Query: 20  MVVHRGGCHCKRIRWEVEAASSVTAWDCNCSDCSMRGNTHFTVPSQHFKLLGNSDKFTST 79
           +V H GGCHC  +R+EV A++ +  +DCNCS C  + N HF VP+  FKLL  ++  T T
Sbjct: 145 LVKHTGGCHCGAVRFEVWASADLHIFDCNCSICKKKQNRHFIVPASRFKLLKGAEHIT-T 204

Query: 80  YTFGTHIAKHTFCKVCGITSFYHSRSTPDGVSVSFRCVDPGTLNHVEINNFDGKNWEQAH 139
           YTF TH A+HTFCK CG+ SFY  RS P G  ++  C+D GT+  +    F+G +WE+A 
Sbjct: 205 YTFNTHKAQHTFCKRCGVQSFYTPRSNPGGFGIAPHCLDEGTVRSMVTEEFNGSDWEKAM 264

Query: 140 HHHHPSKN 148
             H   KN
Sbjct: 265 KEHKTIKN 271

[Close]

BLAST of Lsi09G009460 vs. TrEMBL
Match: A0A0A0KN47_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G410710 PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 1.3e-61
Identity = 109/122 (89.34%), Postives = 114/122 (93.44%), Query Frame = 1


Query: 20  MVVHRGGCHCKRIRWEVEAASSVTAWDCNCSDCSMRGNTHFTVPSQHFKLLGNSDKFTST 79
           MVVH GGCHCKRIRWEVEAASSV AWDCNCS+CSMRGNTHFTVPS+HFKLLG+SD F ST
Sbjct: 7   MVVHSGGCHCKRIRWEVEAASSVIAWDCNCSNCSMRGNTHFTVPSKHFKLLGDSDDFIST 66

Query: 80  YTFGTHIAKHTFCKVCGITSFYHSRSTPDGVSVSFRCVDPGTLNHVEINNFDGKNWEQAH 139
           YTFGTH AKHTFCKVCGITSFYHSRSTPDGVSVSFRCVDPGTL+HV+I  FDG NWEQAH
Sbjct: 67  YTFGTHTAKHTFCKVCGITSFYHSRSTPDGVSVSFRCVDPGTLDHVQIIKFDGTNWEQAH 126

Query: 140 HH 142
           HH
Sbjct: 127 HH 128

[Close]

BLAST of Lsi09G009460 vs. TrEMBL
Match: A0A059BUT9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F02876 PE=4 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 3.5e-51
Identity = 87/120 (72.50%), Postives = 104/120 (86.67%), Query Frame = 1


Query: 20  MVVHRGGCHCKRIRWEVEAASSVTAWDCNCSDCSMRGNTHFTVPSQHFKLLGNSDKFTST 79
           +++H GGCHC+R+RWEVEA +SV AW CNCSDCSMRGN HF VPS+ FKLLGNSD++ +T
Sbjct: 5   LLLHSGGCHCRRVRWEVEAPTSVVAWKCNCSDCSMRGNIHFIVPSERFKLLGNSDQYLTT 64

Query: 80  YTFGTHIAKHTFCKVCGITSFYHSRSTPDGVSVSFRCVDPGTLNHVEINNFDGKNWEQAH 139
           YTFGTH AKHTFCKVCGITSFY  RS PDG++V++RCVDPGTL HVEI  FDG+NWE ++
Sbjct: 65  YTFGTHTAKHTFCKVCGITSFYKPRSNPDGIAVTYRCVDPGTLAHVEIKQFDGQNWESSY 124

[Close]

BLAST of Lsi09G009460 vs. TrEMBL
Match: U5FK86_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0017s02700g PE=4 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 1.3e-50
Identity = 87/121 (71.90%), Postives = 105/121 (86.78%), Query Frame = 1


Query: 20  MVVHRGGCHCKRIRWEVEAASSVTAWDCNCSDCSMRGNTHFTVPSQHFKLLGNSDKFTST 79
           MV+H GGCHC+R+RW V+A SSV AW+CNCSDCSMRGNTHF VPS+ F+LLG+S +F +T
Sbjct: 5   MVIHNGGCHCRRVRWRVQAPSSVVAWNCNCSDCSMRGNTHFIVPSEKFELLGDSKEFLTT 64

Query: 80  YTFGTHIAKHTFCKVCGITSFYHSRSTPDGVSVSFRCVDPGTLNHVEINNFDGKNWEQAH 139
           YTFGTH AKHTFCK CGITSFY  RS PDGV+V+FRCVDPGTL HVEI ++DG+NWE ++
Sbjct: 65  YTFGTHTAKHTFCKFCGITSFYIPRSNPDGVAVTFRCVDPGTLTHVEIKHYDGRNWESSY 124

Query: 140 H 141
           +
Sbjct: 125 N 125

[Close]

BLAST of Lsi09G009460 vs. TrEMBL
Match: A0A059BTH5_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F02877 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 5.1e-50
Identity = 83/120 (69.17%), Postives = 105/120 (87.50%), Query Frame = 1


Query: 20  MVVHRGGCHCKRIRWEVEAASSVTAWDCNCSDCSMRGNTHFTVPSQHFKLLGNSDKFTST 79
           +++H GGCHC+++RWE+EA +SV AW+CNCSDCSMRGN +F VPS+ FKLLGNSD++ +T
Sbjct: 5   LLLHSGGCHCRKVRWEIEAPTSVVAWECNCSDCSMRGNINFVVPSERFKLLGNSDQYLTT 64

Query: 80  YTFGTHIAKHTFCKVCGITSFYHSRSTPDGVSVSFRCVDPGTLNHVEINNFDGKNWEQAH 139
           YTFGTH AKHTFCKVCGITSFY  RS PDG++V++RCVDPGTL HVEI  +DG+NWE ++
Sbjct: 65  YTFGTHTAKHTFCKVCGITSFYKPRSNPDGIAVTYRCVDPGTLAHVEIKQYDGQNWESSY 124

[Close]

BLAST of Lsi09G009460 vs. TrEMBL
Match: A0A151U9I6_CAJCA (Centromere protein V OS=Cajanus cajan GN=KK1_020181 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 6.7e-50
Identity = 87/120 (72.50%), Postives = 102/120 (85.00%), Query Frame = 1


Query: 21  VVHRGGCHCKRIRWEVEAASSVTAWDCNCSDCSMRGNTHFTVPSQHFKLLGNSDKFTSTY 80
           VVH GGCHCK +RW+  A SSV AWDCNCS+CSMR N HF VP+ +F+LLG+S KF STY
Sbjct: 31  VVHTGGCHCKSVRWKAVAPSSVVAWDCNCSNCSMRANNHFIVPADNFELLGDSGKFLSTY 90

Query: 81  TFGTHIAKHTFCKVCGITSFYHSRSTPDGVSVSFRCVDPGTLNHVEINNFDGKNWEQAHH 140
           TFG+H AKHTFCK+CGITSFY+ RS PDGV+V+FRCVDPGTL HVEI NFDGKNWE +++
Sbjct: 91  TFGSHTAKHTFCKICGITSFYYPRSNPDGVAVAFRCVDPGTLTHVEIRNFDGKNWESSYN 150

[Close]

BLAST of Lsi09G009460 vs. TAIR10
Match: AT5G16940.1 (AT5G16940.1 carbon-sulfur lyases)

HSP 1 Score: 187.2 bits (474), Expect = 7.3e-48
Identity = 78/120 (65.00%), Postives = 96/120 (80.00%), Query Frame = 1


Query: 20  MVVHRGGCHCKRIRWEVEAASSVTAWDCNCSDCSMRGNTHFTVPSQHFKLLGNSDKFTST 79
           ++ H GGCHC +I+W V+AA SV AW CNCSDCSMRGN HF VPS +F+LL +S  F +T
Sbjct: 5   LIFHEGGCHCGKIKWRVKAARSVIAWSCNCSDCSMRGNVHFIVPSSNFELLDDSKDFITT 64

Query: 80  YTFGTHIAKHTFCKVCGITSFYHSRSTPDGVSVSFRCVDPGTLNHVEINNFDGKNWEQAH 139
           YTFGTH AKHTFCKVCGITSFY  RS PDGV+V+ +CV  GTL H+E+ ++DG+NWE +H
Sbjct: 65  YTFGTHTAKHTFCKVCGITSFYIPRSNPDGVAVTVKCVKSGTLAHIEVKSYDGQNWEMSH 124

[Close]

BLAST of Lsi09G009460 vs. NCBI nr
Match: gi|700195853|gb|KGN51030.1| (hypothetical protein Csa_5G410710 [Cucumis sativus])

HSP 1 Score: 243.8 bits (621), Expect = 1.9e-61
Identity = 109/122 (89.34%), Postives = 114/122 (93.44%), Query Frame = 1


Query: 20  MVVHRGGCHCKRIRWEVEAASSVTAWDCNCSDCSMRGNTHFTVPSQHFKLLGNSDKFTST 79
           MVVH GGCHCKRIRWEVEAASSV AWDCNCS+CSMRGNTHFTVPS+HFKLLG+SD F ST
Sbjct: 7   MVVHSGGCHCKRIRWEVEAASSVIAWDCNCSNCSMRGNTHFTVPSKHFKLLGDSDDFIST 66

Query: 80  YTFGTHIAKHTFCKVCGITSFYHSRSTPDGVSVSFRCVDPGTLNHVEINNFDGKNWEQAH 139
           YTFGTH AKHTFCKVCGITSFYHSRSTPDGVSVSFRCVDPGTL+HV+I  FDG NWEQAH
Sbjct: 67  YTFGTHTAKHTFCKVCGITSFYHSRSTPDGVSVSFRCVDPGTLDHVQIIKFDGTNWEQAH 126

Query: 140 HH 142
           HH
Sbjct: 127 HH 128

[Close]

BLAST of Lsi09G009460 vs. NCBI nr
Match: gi|702374682|ref|XP_010062288.1| (PREDICTED: centromere protein V-like isoform X3 [Eucalyptus grandis])

HSP 1 Score: 209.1 bits (531), Expect = 5.1e-51
Identity = 87/120 (72.50%), Postives = 104/120 (86.67%), Query Frame = 1


Query: 20  MVVHRGGCHCKRIRWEVEAASSVTAWDCNCSDCSMRGNTHFTVPSQHFKLLGNSDKFTST 79
           +++H GGCHC+R+RWEVEA +SV AW CNCSDCSMRGN HF VPS+ FKLLGNSD++ +T
Sbjct: 5   LLLHSGGCHCRRVRWEVEAPTSVVAWKCNCSDCSMRGNIHFIVPSERFKLLGNSDQYLTT 64

Query: 80  YTFGTHIAKHTFCKVCGITSFYHSRSTPDGVSVSFRCVDPGTLNHVEINNFDGKNWEQAH 139
           YTFGTH AKHTFCKVCGITSFY  RS PDG++V++RCVDPGTL HVEI  FDG+NWE ++
Sbjct: 65  YTFGTHTAKHTFCKVCGITSFYKPRSNPDGIAVTYRCVDPGTLAHVEIKQFDGQNWESSY 124

[Close]

BLAST of Lsi09G009460 vs. NCBI nr
Match: gi|702374676|ref|XP_010062287.1| (PREDICTED: centromere protein V-like isoform X2 [Eucalyptus grandis])

HSP 1 Score: 209.1 bits (531), Expect = 5.1e-51
Identity = 88/127 (69.29%), Postives = 107/127 (84.25%), Query Frame = 1


Query: 13  RRLLLKMMVVHRGGCHCKRIRWEVEAASSVTAWDCNCSDCSMRGNTHFTVPSQHFKLLGN 72
           R ++   +++H GGCHC+R+RWEVEA +SV AW CNCSDCSMRGN HF VPS+ FKLLGN
Sbjct: 33  RAVMESELLLHSGGCHCRRVRWEVEAPTSVVAWKCNCSDCSMRGNIHFIVPSERFKLLGN 92

Query: 73  SDKFTSTYTFGTHIAKHTFCKVCGITSFYHSRSTPDGVSVSFRCVDPGTLNHVEINNFDG 132
           SD++ +TYTFGTH AKHTFCKVCGITSFY  RS PDG++V++RCVDPGTL HVEI  FDG
Sbjct: 93  SDQYLTTYTFGTHTAKHTFCKVCGITSFYKPRSNPDGIAVTYRCVDPGTLAHVEIKQFDG 152

Query: 133 KNWEQAH 140
           +NWE ++
Sbjct: 153 QNWESSY 159

[Close]

BLAST of Lsi09G009460 vs. NCBI nr
Match: gi|702374670|ref|XP_010062286.1| (PREDICTED: centromere protein V-like isoform X1 [Eucalyptus grandis])

HSP 1 Score: 209.1 bits (531), Expect = 5.1e-51
Identity = 88/127 (69.29%), Postives = 107/127 (84.25%), Query Frame = 1


Query: 13  RRLLLKMMVVHRGGCHCKRIRWEVEAASSVTAWDCNCSDCSMRGNTHFTVPSQHFKLLGN 72
           R ++   +++H GGCHC+R+RWEVEA +SV AW CNCSDCSMRGN HF VPS+ FKLLGN
Sbjct: 41  RAVMESELLLHSGGCHCRRVRWEVEAPTSVVAWKCNCSDCSMRGNIHFIVPSERFKLLGN 100

Query: 73  SDKFTSTYTFGTHIAKHTFCKVCGITSFYHSRSTPDGVSVSFRCVDPGTLNHVEINNFDG 132
           SD++ +TYTFGTH AKHTFCKVCGITSFY  RS PDG++V++RCVDPGTL HVEI  FDG
Sbjct: 101 SDQYLTTYTFGTHTAKHTFCKVCGITSFYKPRSNPDGIAVTYRCVDPGTLAHVEIKQFDG 160

Query: 133 KNWEQAH 140
           +NWE ++
Sbjct: 161 QNWESSY 167

[Close]

BLAST of Lsi09G009460 vs. NCBI nr
Match: gi|566210951|ref|XP_006372549.1| (hypothetical protein POPTR_0017s02700g [Populus trichocarpa])

HSP 1 Score: 207.2 bits (526), Expect = 1.9e-50
Identity = 87/121 (71.90%), Postives = 105/121 (86.78%), Query Frame = 1


Query: 20  MVVHRGGCHCKRIRWEVEAASSVTAWDCNCSDCSMRGNTHFTVPSQHFKLLGNSDKFTST 79
           MV+H GGCHC+R+RW V+A SSV AW+CNCSDCSMRGNTHF VPS+ F+LLG+S +F +T
Sbjct: 5   MVIHNGGCHCRRVRWRVQAPSSVVAWNCNCSDCSMRGNTHFIVPSEKFELLGDSKEFLTT 64

Query: 80  YTFGTHIAKHTFCKVCGITSFYHSRSTPDGVSVSFRCVDPGTLNHVEINNFDGKNWEQAH 139
           YTFGTH AKHTFCK CGITSFY  RS PDGV+V+FRCVDPGTL HVEI ++DG+NWE ++
Sbjct: 65  YTFGTHTAKHTFCKFCGITSFYIPRSNPDGVAVTFRCVDPGTLTHVEIKHYDGRNWESSY 124

Query: 140 H 141
           +
Sbjct: 125 N 125

The following BLAST results are available for this feature:

BLAST of Lsi09G009460 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CENPV_MOUSE	6.4e-30	47.66	Centromere protein V OS=Mus musculus GN=Cenpv PE=1 SV=2	[more]
CENPV_HUMAN	1.9e-29	46.88	Centromere protein V OS=Homo sapiens GN=CENPV PE=1 SV=1	[more]

BLAST of Lsi09G009460 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KN47_CUCSA	1.3e-61	89.34	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G410710 PE=4 SV=1	[more]
A0A059BUT9_EUCGR	3.5e-51	72.50	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F02876 PE=4 SV=1	[more]
U5FK86_POPTR	1.3e-50	71.90	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0017s02700g PE=4 SV=1	[more]
A0A059BTH5_EUCGR	5.1e-50	69.17	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F02877 PE=4 SV=1	[more]
A0A151U9I6_CAJCA	6.7e-50	72.50	Centromere protein V OS=Cajanus cajan GN=KK1_020181 PE=4 SV=1	[more]

BLAST of Lsi09G009460 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G16940.1	7.3e-48	65.00	carbon-sulfur lyases	[more]

BLAST of Lsi09G009460 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700195853\|gb\|KGN51030.1\|	1.9e-61	89.34	hypothetical protein Csa_5G410710 [Cucumis sativus]	[more]
gi\|702374682\|ref\|XP_010062288.1\|	5.1e-51	72.50	PREDICTED: centromere protein V-like isoform X3 [Eucalyptus grandis]	[more]
gi\|702374676\|ref\|XP_010062287.1\|	5.1e-51	69.29	PREDICTED: centromere protein V-like isoform X2 [Eucalyptus grandis]	[more]
gi\|702374670\|ref\|XP_010062286.1\|	5.1e-51	69.29	PREDICTED: centromere protein V-like isoform X1 [Eucalyptus grandis]	[more]
gi\|566210951\|ref\|XP_006372549.1\|	1.9e-50	71.90	hypothetical protein POPTR_0017s02700g [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0016846	carbon-sulfur lyase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0008152	metabolic process

Vocabulary: **INTERPRO**
Term	Definition
IPR011057	Mss4-like_sf
IPR006913	GFA/CENP-V

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016846	carbon-sulfur lyase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi09G009460.1	Lsi09G009460.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006913	Glutathione-dependent formaldehyde-activating enzyme/centromere protein V	GENE3D	G3DSA:3.90.1590.10		coord: 15..118 score: 4.8
IPR006913	Glutathione-dependent formaldehyde-activating enzyme/centromere protein V	PFAM	PF04828	GFA	coord: 46..119 score: 8.
IPR011057	Mss4-like	unknown	SSF51316	Mss4-like	coord: 19..126 score: 8.89
None	No IPR available	PANTHER	PTHR28620	FAMILY NOT NAMED	coord: 20..142 score: 1.8
None	No IPR available	PANTHER	PTHR28620:SF1	PROTEIN F25B4.8, ISOFORM A	coord: 20..142 score: 1.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi09G009460	Csa5G410710	Cucumber (Chinese Long) v2	culsiB330
Lsi09G009460	CSPI05G14770	Wild cucumber (PI 183967)	cpilsiB330
Lsi09G009460	Cucsa.034690	Cucumber (Gy14) v1	cgylsiB008
Lsi09G009460	CmaCh04G023070	Cucurbita maxima (Rimu)	cmalsiB622
Lsi09G009460	CmoCh04G024100	Cucurbita moschata (Rifu)	cmolsiB610
Lsi09G009460	Cla019779	Watermelon (97103) v1	lsiwmB009
Lsi09G009460	MELO3C022822	Melon (DHL92) v3.5.1	lsimeB014
Lsi09G009460	ClCG03G008860	Watermelon (Charleston Gray)	lsiwcgB014
Lsi09G009460	MELO3C022822.2	Melon (DHL92) v3.6.1	lsimedB015
Lsi09G009460	Cla97C03G060040	Watermelon (97103) v2	lsiwmbB013
Lsi09G009460	Bhi12G001090	Wax gourd	lsiwgoB009
Lsi09G009460	CsGy5G014660	Cucumber (Gy14) v2	cgyblsiB302
Lsi09G009460	Carg18257	Silver-seed gourd	carlsiB480
Lsi09G009460	CsaV3_5G023900	Cucumber (Chinese Long) v3	cuclsiB353

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi09G009460	Cucurbita maxima (Rimu)	cmalsiB268
Lsi09G009460	Cucurbita moschata (Rifu)	cmolsiB256
Lsi09G009460	Cucurbita pepo (Zucchini)	cpelsiB130
Lsi09G009460	Cucurbita pepo (Zucchini)	cpelsiB311
Lsi09G009460	Silver-seed gourd	carlsiB754