Lsi09G006500 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi09G006500
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionPentatricopeptide repeat-containing protein, putative
Locationchr09 : 7261246 .. 7262898 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTTTCGTCGATCCCTCAGTTCCCTCCGAAGATTATCTCAAAGAACAAGCTCTTTCCACTCGCTTTCAGCTTCTTCTTCTCACTCTGCTTCAGCTAGATCAGTTTCTTGTTCAAAAACAATCACTACAAATCAATCTTCAATCTCCATTTCATCTCGTTCCAATGAGCATTCAACTGGGCTTATTCCGAATCGCAATGATGCCTCTCACCATTTCACCAATCATGGTACAGAGCATAGCAAACAGGATTCGGAGTCCAACCAAAATTCTACTATGGAAAGTGCTGAAATCGCCCAGGATGCTGAAAAGTTGTGTAAGTTAATATCAAAAAACCCTAATTCTTGCATTGAATCATTGCTTGATGGTGCTTCAATGGAGGTGTCGCTGGCTCTGGTTGTGGAGGTGTTGAAGAAGCTGAGCAATGCCGGATTTCTTGCGCTTTCGTTCTTCAGATGGGCAGAGAAGCAGAAAGGCTTCAAACACACTACGGAGAGCTACAACTGGTTAATCGAATCCTTGGGTAAGATCAAACAGTTTAATGTGATTTGGAATTTGGTGAGTGATATGAAACGCAAAGGAATTTTAAGTCGAGAAACGTTTGCTTTAATCTCTCGGAGATATGCCCGAGCTAGAAAGGTTAAGGAAGCAATCGATTCATTTGAGAAGATGGAGAAGTTTGGATTTCAACTGGGAGTATCAGATTTCAATAGACTAATTGATACACTGAGCAAATCCAGAAACGTTGAGAAAGCACAAGAGGTGTTTGATAAAATGAAGCACAGAAGATTTAAGCCTGATATCAAGTCATACACAATTCTTTTAGAAGGATGGGGTCAGGATCAGAATTTGTTGAGGTTGAATGAGGTTTATAGGGAGATGAGAGACGATGGATTCGAACCCGATGTCGTTACTTTCGGTATAATTATCAATGCACATTGCAAGGCAAAGAAGTATGATGAAGCAATTCGGTTGTTTCACGAAATGAAAGCGAAGAATGTCAAGCCATCACCTCATGTGTTCTGTACCTTGATCAATGGTTTGGGTTCTGAGAAGAGATTGAGTGAGGCTCTGGAGTTTTTTGAACAGTCGAAGCTTAGCGGCTTTGCTCTGGAGGCACCGACATATAATGCTGTTGTGGGGGCTTATTGTTGGTCAATGAAGATGGCCGATGCATATAGGATGGTAGCTGACATGAGGAAATTTGGCGTTGGTCCAAATTCGAGGACTTACGACATCATATTACATCACTTGATAAAGAATCGGAGATCAAAGGAAGCTTATTCTATATTCCAAAAAATGAGTAGCGACCCTGGGTGTGAACCAACTGTGAGTACATACGAAATTATGGTGAGAATGTTTTGCAACGAAGAACGAGTGGATATGGCGATTCGGATTTGGGATGAAATGAAGGCTAAAGGAGTTCTTCCGGGAATGCACATGTTCTCGACGTTGATTAATAGCTTATGCCATGAGAACAAGTTAGAGGATGCTTGCAAATACTTTCAAGAGATGTTGGATGTAGGTATTCGGCCGCCAGCAGCGATGTTTAGCAATTTGAAACAGGCTCTTATTGATGAGGGCAGAAAGGATACTGCTTTACTTCTGGCAGAGAAGATCGAAAAACTGCGAAAGGCACCGTTGCTCGGTTGA

mRNA sequence

ATGGATTTTCGTCGATCCCTCAGTTCCCTCCGAAGATTATCTCAAAGAACAAGCTCTTTCCACTCGCTTTCAGCTTCTTCTTCTCACTCTGCTTCAGCTAGATCAGTTTCTTGTTCAAAAACAATCACTACAAATCAATCTTCAATCTCCATTTCATCTCGTTCCAATGAGCATTCAACTGGGCTTATTCCGAATCGCAATGATGCCTCTCACCATTTCACCAATCATGGTACAGAGCATAGCAAACAGGATTCGGAGTCCAACCAAAATTCTACTATGGAAAGTGCTGAAATCGCCCAGGATGCTGAAAAGTTGTGTAAGTTAATATCAAAAAACCCTAATTCTTGCATTGAATCATTGCTTGATGGTGCTTCAATGGAGGTGTCGCTGGCTCTGGTTGTGGAGGTGTTGAAGAAGCTGAGCAATGCCGGATTTCTTGCGCTTTCGTTCTTCAGATGGGCAGAGAAGCAGAAAGGCTTCAAACACACTACGGAGAGCTACAACTGGTTAATCGAATCCTTGGGTAAGATCAAACAGTTTAATGTGATTTGGAATTTGGTGAGTGATATGAAACGCAAAGGAATTTTAAGTCGAGAAACGTTTGCTTTAATCTCTCGGAGATATGCCCGAGCTAGAAAGGTTAAGGAAGCAATCGATTCATTTGAGAAGATGGAGAAGTTTGGATTTCAACTGGGAGTATCAGATTTCAATAGACTAATTGATACACTGAGCAAATCCAGAAACGTTGAGAAAGCACAAGAGGTGTTTGATAAAATGAAGCACAGAAGATTTAAGCCTGATATCAAGTCATACACAATTCTTTTAGAAGGATGGGGTCAGGATCAGAATTTGTTGAGGTTGAATGAGGTTTATAGGGAGATGAGAGACGATGGATTCGAACCCGATGTCGTTACTTTCGGTATAATTATCAATGCACATTGCAAGGCAAAGAAGTATGATGAAGCAATTCGGTTGTTTCACGAAATGAAAGCGAAGAATGTCAAGCCATCACCTCATGTGTTCTGTACCTTGATCAATGGTTTGGGTTCTGAGAAGAGATTGAGTGAGGCTCTGGAGTTTTTTGAACAGTCGAAGCTTAGCGGCTTTGCTCTGGAGGCACCGACATATAATGCTGTTGTGGGGGCTTATTGTTGGTCAATGAAGATGGCCGATGCATATAGGATGGTAGCTGACATGAGGAAATTTGGCGTTGGTCCAAATTCGAGGACTTACGACATCATATTACATCACTTGATAAAGAATCGGAGATCAAAGGAAGCTTATTCTATATTCCAAAAAATGAGTAGCGACCCTGGGTGTGAACCAACTGTGAGTACATACGAAATTATGGTGAGAATGTTTTGCAACGAAGAACGAGTGGATATGGCGATTCGGATTTGGGATGAAATGAAGGCTAAAGGAGTTCTTCCGGGAATGCACATGTTCTCGACGTTGATTAATAGCTTATGCCATGAGAACAAGTTAGAGGATGCTTGCAAATACTTTCAAGAGATGTTGGATGTAGGTATTCGGCCGCCAGCAGCGATGTTTAGCAATTTGAAACAGGCTCTTATTGATGAGGGCAGAAAGGATACTGCTTTACTTCTGGCAGAGAAGATCGAAAAACTGCGAAAGGCACCGTTGCTCGGTTGA

Coding sequence (CDS)

ATGGATTTTCGTCGATCCCTCAGTTCCCTCCGAAGATTATCTCAAAGAACAAGCTCTTTCCACTCGCTTTCAGCTTCTTCTTCTCACTCTGCTTCAGCTAGATCAGTTTCTTGTTCAAAAACAATCACTACAAATCAATCTTCAATCTCCATTTCATCTCGTTCCAATGAGCATTCAACTGGGCTTATTCCGAATCGCAATGATGCCTCTCACCATTTCACCAATCATGGTACAGAGCATAGCAAACAGGATTCGGAGTCCAACCAAAATTCTACTATGGAAAGTGCTGAAATCGCCCAGGATGCTGAAAAGTTGTGTAAGTTAATATCAAAAAACCCTAATTCTTGCATTGAATCATTGCTTGATGGTGCTTCAATGGAGGTGTCGCTGGCTCTGGTTGTGGAGGTGTTGAAGAAGCTGAGCAATGCCGGATTTCTTGCGCTTTCGTTCTTCAGATGGGCAGAGAAGCAGAAAGGCTTCAAACACACTACGGAGAGCTACAACTGGTTAATCGAATCCTTGGGTAAGATCAAACAGTTTAATGTGATTTGGAATTTGGTGAGTGATATGAAACGCAAAGGAATTTTAAGTCGAGAAACGTTTGCTTTAATCTCTCGGAGATATGCCCGAGCTAGAAAGGTTAAGGAAGCAATCGATTCATTTGAGAAGATGGAGAAGTTTGGATTTCAACTGGGAGTATCAGATTTCAATAGACTAATTGATACACTGAGCAAATCCAGAAACGTTGAGAAAGCACAAGAGGTGTTTGATAAAATGAAGCACAGAAGATTTAAGCCTGATATCAAGTCATACACAATTCTTTTAGAAGGATGGGGTCAGGATCAGAATTTGTTGAGGTTGAATGAGGTTTATAGGGAGATGAGAGACGATGGATTCGAACCCGATGTCGTTACTTTCGGTATAATTATCAATGCACATTGCAAGGCAAAGAAGTATGATGAAGCAATTCGGTTGTTTCACGAAATGAAAGCGAAGAATGTCAAGCCATCACCTCATGTGTTCTGTACCTTGATCAATGGTTTGGGTTCTGAGAAGAGATTGAGTGAGGCTCTGGAGTTTTTTGAACAGTCGAAGCTTAGCGGCTTTGCTCTGGAGGCACCGACATATAATGCTGTTGTGGGGGCTTATTGTTGGTCAATGAAGATGGCCGATGCATATAGGATGGTAGCTGACATGAGGAAATTTGGCGTTGGTCCAAATTCGAGGACTTACGACATCATATTACATCACTTGATAAAGAATCGGAGATCAAAGGAAGCTTATTCTATATTCCAAAAAATGAGTAGCGACCCTGGGTGTGAACCAACTGTGAGTACATACGAAATTATGGTGAGAATGTTTTGCAACGAAGAACGAGTGGATATGGCGATTCGGATTTGGGATGAAATGAAGGCTAAAGGAGTTCTTCCGGGAATGCACATGTTCTCGACGTTGATTAATAGCTTATGCCATGAGAACAAGTTAGAGGATGCTTGCAAATACTTTCAAGAGATGTTGGATGTAGGTATTCGGCCGCCAGCAGCGATGTTTAGCAATTTGAAACAGGCTCTTATTGATGAGGGCAGAAAGGATACTGCTTTACTTCTGGCAGAGAAGATCGAAAAACTGCGAAAGGCACCGTTGCTCGGTTGA

Protein sequence

MDFRRSLSSLRRLSQRTSSFHSLSASSSHSASARSVSCSKTITTNQSSISISSRSNEHSTGLIPNRNDASHHFTNHGTEHSKQDSESNQNSTMESAEIAQDAEKLCKLISKNPNSCIESLLDGASMEVSLALVVEVLKKLSNAGFLALSFFRWAEKQKGFKHTTESYNWLIESLGKIKQFNVIWNLVSDMKRKGILSRETFALISRRYARARKVKEAIDSFEKMEKFGFQLGVSDFNRLIDTLSKSRNVEKAQEVFDKMKHRRFKPDIKSYTILLEGWGQDQNLLRLNEVYREMRDDGFEPDVVTFGIIINAHCKAKKYDEAIRLFHEMKAKNVKPSPHVFCTLINGLGSEKRLSEALEFFEQSKLSGFALEAPTYNAVVGAYCWSMKMADAYRMVADMRKFGVGPNSRTYDIILHHLIKNRRSKEAYSIFQKMSSDPGCEPTVSTYEIMVRMFCNEERVDMAIRIWDEMKAKGVLPGMHMFSTLINSLCHENKLEDACKYFQEMLDVGIRPPAAMFSNLKQALIDEGRKDTALLLAEKIEKLRKAPLLG
BLAST of Lsi09G006500 vs. Swiss-Prot
Match: PP112_ARATH (Pentatricopeptide repeat-containing protein At1g71060, mitochondrial OS=Arabidopsis thaliana GN=At1g71060 PE=2 SV=1)

HSP 1 Score: 676.0 bits (1743), Expect = 3.4e-193
Identity = 339/498 (68.07%), Postives = 417/498 (83.73%), Query Frame = 1

Query: 53  SRSNEHSTGLIPNRNDASHHFTNHGTEHSKQDSESNQNSTMESAEIAQDAEKLCKLISKN 112
           S S+  S   IP  + AS+ FT +G+ H+     S+  + + + + +QDAE++CK+++K 
Sbjct: 23  SSSSSPSLESIPWIHKASN-FTLYGSFHA-----SSVETQVSANDASQDAERICKILTKF 82

Query: 113 PNSCIESLLDGASMEVSLALVVEVLKKLSNAGFLALSFFRWAEKQKGFKHTTESYNWLIE 172
            +S +E+LL+ AS+++S AL+ EVLKKLSNAG LALS F+WAE QKGFKHTT +YN LIE
Sbjct: 83  TDSKVETLLNEASVKLSPALIEEVLKKLSNAGVLALSVFKWAENQKGFKHTTSNYNALIE 142

Query: 173 SLGKIKQFNVIWNLVSDMKRKGILSRETFALISRRYARARKVKEAIDSFEKMEKFGFQLG 232
           SLGKIKQF +IW+LV DMK K +LS+ETFALISRRYARARKVKEAI +F KME+FGF++ 
Sbjct: 143 SLGKIKQFKLIWSLVDDMKAKKLLSKETFALISRRYARARKVKEAIGAFHKMEEFGFKME 202

Query: 233 VSDFNRLIDTLSKSRNVEKAQEVFDKMKHRRFKPDIKSYTILLEGWGQDQNLLRLNEVYR 292
            SDFNR++DTLSKSRNV  AQ+VFDKMK +RF+PDIKSYTILLEGWGQ+ NLLR++EV R
Sbjct: 203 SSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNR 262

Query: 293 EMRDDGFEPDVVTFGIIINAHCKAKKYDEAIRLFHEMKAKNVKPSPHVFCTLINGLGSEK 352
           EM+D+GFEPDVV +GIIINAHCKAKKY+EAIR F+EM+ +N KPSPH+FC+LINGLGSEK
Sbjct: 263 EMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEK 322

Query: 353 RLSEALEFFEQSKLSGFALEAPTYNAVVGAYCWSMKMADAYRMVADMRKFGVGPNSRTYD 412
           +L++ALEFFE+SK SGF LEAPTYNA+VGAYCWS +M DAY+ V +MR  GVGPN+RTYD
Sbjct: 323 KLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYD 382

Query: 413 IILHHLIKNRRSKEAYSIFQKMSSDPGCEPTVSTYEIMVRMFCNEERVDMAIRIWDEMKA 472
           IILHHLI+ +RSKEAY ++Q MS    CEPTVSTYEIMVRMFCN+ER+DMAI+IWDEMK 
Sbjct: 383 IILHHLIRMQRSKEAYEVYQTMS----CEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKG 442

Query: 473 KGVLPGMHMFSTLINSLCHENKLEDACKYFQEMLDVGIRPPAAMFSNLKQALIDEGRKDT 532
           KGVLPGMHMFS+LI +LCHENKL++AC+YF EMLDVGIRPP  MFS LKQ L+DEGRKD 
Sbjct: 443 KGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDK 502

Query: 533 ALLLAEKIEKLRKAPLLG 551
              L  K+++LRK  L+G
Sbjct: 503 VTDLVVKMDRLRKTQLVG 510

BLAST of Lsi09G006500 vs. Swiss-Prot
Match: PP129_ARATH (Pentatricopeptide repeat-containing protein At1g77360, mitochondrial OS=Arabidopsis thaliana GN=At1g77360 PE=2 SV=2)

HSP 1 Score: 385.6 bits (989), Expect = 9.3e-106
Identity = 185/459 (40.31%), Postives = 296/459 (64.49%), Query Frame = 1

Query: 90  NSTMESAEIAQDAEKLCKLISKNPNSCIESLLDGASMEVSLALVVEVLKKLSNAGFLALS 149
           +S+ +  ++A  A+ + K++  +P   ++S LD + + VS  +V +VL +  NAG L   
Sbjct: 60  SSSEQVRDVADVAKNISKVLMSSPQLVLDSALDQSGLRVSQEVVEDVLNRFRNAGLLTYR 119

Query: 150 FFRWAEKQKGFKHTTESYNWLIESLGKIKQFNVIWNLVSDMKRKGILSRETFALISRRYA 209
           FF+W+EKQ+ ++H+  +Y+ +IES  KI+Q+ ++W+L++ M++K +L+ ETF ++ R+YA
Sbjct: 120 FFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKMLNVETFCIVMRKYA 179

Query: 210 RARKVKEAIDSFEKMEKFGFQLGVSDFNRLIDTLSKSRNVEKAQEVFDKMKHRRFKPDIK 269
           RA+KV EAI +F  MEK+     +  FN L+  L KS+NV KAQEVF+ M+ R F PD K
Sbjct: 180 RAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDR-FTPDSK 239

Query: 270 SYTILLEGWGQDQNLLRLNEVYREMRDDGFEPDVVTFGIIINAHCKAKKYDEAIRLFHEM 329
           +Y+ILLEGWG++ NL +  EV+REM D G  PD+VT+ I+++  CKA + DEA+ +   M
Sbjct: 240 TYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSM 299

Query: 330 KAKNVKPSPHVFCTLINGLGSEKRLSEALEFFEQSKLSGFALEAPTYNAVVGAYCWSMKM 389
                KP+  ++  L++  G+E RL EA++ F + + SG   +   +N+++GA+C + +M
Sbjct: 300 DPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRM 359

Query: 390 ADAYRMVADMRKFGVGPNSRTYDIILHHLIKNRRSKEAYSIFQKMSSDPGCEPTVSTYEI 449
            + YR++ +M+  GV PNS++ +IIL HLI+     EA+ +F+KM     CEP   TY +
Sbjct: 360 KNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIK--VCEPDADTYTM 419

Query: 450 MVRMFCNEERVDMAIRIWDEMKAKGVLPGMHMFSTLINSLCHENKLEDACKYFQEMLDVG 509
           +++MFC ++ ++ A ++W  M+ KGV P MH FS LIN LC E   + AC   +EM+++G
Sbjct: 420 VIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMG 479

Query: 510 IRPPAAMFSNLKQALIDEGRKDTALLLAEKIEKLRKAPL 549
           IRP    F  L+Q LI E R+D    L EK+  L   PL
Sbjct: 480 IRPSGVTFGRLRQLLIKEEREDVLKFLNEKMNVLVNEPL 515

BLAST of Lsi09G006500 vs. Swiss-Prot
Match: PP293_ARATH (Pentatricopeptide repeat-containing protein At3g62470, mitochondrial OS=Arabidopsis thaliana GN=At3g62470 PE=2 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 2.6e-68
Identity = 131/437 (29.98%), Postives = 255/437 (58.35%), Query Frame = 1

Query: 79  EHSKQDSESNQNSTMESAEIAQDAEKLCKLISK--NPNSCIESLLDGASMEVSLALVVEV 138
           E    + E    S +ES+   ++ E++CK+I +    +  +E++LD   +++S  L+VEV
Sbjct: 108 ESECDNDEETGVSCVESSTNPEEVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEV 167

Query: 139 LKKLSNAGFLALSFFRWAEKQKGFKHTTESYNWLIESLGKIKQFNVIWNLVSDMKRKGIL 198
           L++  +A   A  FF WA +++GF H + +YN ++  L K +QF  + +++ +M  KG+L
Sbjct: 168 LERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL 227

Query: 199 SRETFALISRRYARARKVKEAIDSFEKMEKFGFQLGVSDFNRLIDTLSKSRNVEKAQEVF 258
           + ETF +  + +A A++ K+A+  FE M+K+ F++GV   N L+D+L +++  ++AQ +F
Sbjct: 228 TMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLF 287

Query: 259 DKMKHRRFKPDIKSYTILLEGWGQDQNLLRLNEVYREMRDDGFEPDVVTFGIIINAHCKA 318
           DK+K  RF P++ +YT+LL GW + +NL+    ++ +M D G +PD+V   +++    ++
Sbjct: 288 DKLK-ERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRS 347

Query: 319 KKYDEAIRLFHEMKAKNVKPSPHVFCTLINGLGSEKRLSEALEFFEQSKLSGFALEAPTY 378
           +K  +AI+LFH MK+K   P+   +  +I     +  +  A+E+F+    SG   +A  Y
Sbjct: 348 RKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVY 407

Query: 379 NAVVGAYCWSMKMADAYRMVADMRKFGVGPNSRTYDIILHHLIKNRRSKEAYSIFQKMSS 438
             ++  +    K+   Y ++ +M++ G  P+ +TY+ ++  +   +  + A  I+ KM  
Sbjct: 408 TCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQ 467

Query: 439 DPGCEPTVSTYEIMVRMFCNEERVDMAIRIWDEMKAKGVLPGMHMFSTLINSLCHENKLE 498
           +   EP++ T+ ++++ +      +M   +W+EM  KG+ P  + ++ LI  L  E K  
Sbjct: 468 NE-IEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSR 527

Query: 499 DACKYFQEMLDVGIRPP 514
           +AC+Y +EMLD G++ P
Sbjct: 528 EACRYLEEMLDKGMKTP 542

BLAST of Lsi09G006500 vs. Swiss-Prot
Match: PP294_ARATH (Pentatricopeptide repeat-containing protein At3g62540, mitochondrial OS=Arabidopsis thaliana GN=At3g62540 PE=2 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 5.9e-68
Identity = 131/437 (29.98%), Postives = 253/437 (57.89%), Query Frame = 1

Query: 79  EHSKQDSESNQNSTMESAEIAQDAEKLCKLISK--NPNSCIESLLDGASMEVSLALVVEV 138
           E    + E    S +ES+   ++ E++CK+I +    +  +E++LD   +++S  L+VEV
Sbjct: 108 ESECDNDEETGVSCVESSTNPEEVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEV 167

Query: 139 LKKLSNAGFLALSFFRWAEKQKGFKHTTESYNWLIESLGKIKQFNVIWNLVSDMKRKGIL 198
           L++  +A   A  FF WA +++GF H + +YN ++  L K +QF  + +++ +M  KG+L
Sbjct: 168 LERFRHARKPAFRFFCWAAERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL 227

Query: 199 SRETFALISRRYARARKVKEAIDSFEKMEKFGFQLGVSDFNRLIDTLSKSRNVEKAQEVF 258
           + ETF +  + +A A++ K+A+  FE M+K+ F++GV   N L+D+L +++  ++AQ +F
Sbjct: 228 TMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLF 287

Query: 259 DKMKHRRFKPDIKSYTILLEGWGQDQNLLRLNEVYREMRDDGFEPDVVTFGIIINAHCKA 318
           DK+K  RF P++ +YT+LL GW + +NL+    ++ +M D G +PD+V   +++    ++
Sbjct: 288 DKLK-ERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRS 347

Query: 319 KKYDEAIRLFHEMKAKNVKPSPHVFCTLINGLGSEKRLSEALEFFEQSKLSGFALEAPTY 378
            K  +AI+LFH MK+K   P+   +  +I     +  +  A+E+F+    SG   +A  Y
Sbjct: 348 MKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVY 407

Query: 379 NAVVGAYCWSMKMADAYRMVADMRKFGVGPNSRTYDIILHHLIKNRRSKEAYSIFQKMSS 438
             ++  +    K+   Y ++ +M++ G  P+ +TY+ ++  +   +  +    I+ KM  
Sbjct: 408 TCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQ 467

Query: 439 DPGCEPTVSTYEIMVRMFCNEERVDMAIRIWDEMKAKGVLPGMHMFSTLINSLCHENKLE 498
           +   EP++ T+ ++++ +      +M   +WDEM  KG+ P  + ++ LI  L  E K  
Sbjct: 468 NE-IEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSR 527

Query: 499 DACKYFQEMLDVGIRPP 514
           +AC+Y +EMLD G++ P
Sbjct: 528 EACRYLEEMLDKGMKTP 542

BLAST of Lsi09G006500 vs. Swiss-Prot
Match: PP382_ARATH (Pentatricopeptide repeat-containing protein At5g14820, mitochondrial OS=Arabidopsis thaliana GN=At5g14820 PE=2 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 7.7e-68
Identity = 131/437 (29.98%), Postives = 253/437 (57.89%), Query Frame = 1

Query: 79  EHSKQDSESNQNSTMESAEIAQDAEKLCKLISK--NPNSCIESLLDGASMEVSLALVVEV 138
           E    + E    S +ES+   ++ E++CK+I +    +  +E++LD   +++S  L+VEV
Sbjct: 107 ESECDNDEETGVSCVESSTNPEEVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEV 166

Query: 139 LKKLSNAGFLALSFFRWAEKQKGFKHTTESYNWLIESLGKIKQFNVIWNLVSDMKRKGIL 198
           L++  +A   A  FF WA +++GF H + +YN ++  L K +QF  + +++ +M  KG+L
Sbjct: 167 LERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL 226

Query: 199 SRETFALISRRYARARKVKEAIDSFEKMEKFGFQLGVSDFNRLIDTLSKSRNVEKAQEVF 258
           + ETF +  + +A A++ K+A+  FE M+K+ F++GV   N L+D+L +++  ++AQ +F
Sbjct: 227 TMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLF 286

Query: 259 DKMKHRRFKPDIKSYTILLEGWGQDQNLLRLNEVYREMRDDGFEPDVVTFGIIINAHCKA 318
           DK+K  RF P++ +YT+LL GW + +NL+    ++ +M D G +PD+V   +++    ++
Sbjct: 287 DKLK-ERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRS 346

Query: 319 KKYDEAIRLFHEMKAKNVKPSPHVFCTLINGLGSEKRLSEALEFFEQSKLSGFALEAPTY 378
            K  +AI+LFH MK+K   P+   +  +I     +  +  A+E+F+    SG   +A  Y
Sbjct: 347 MKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVY 406

Query: 379 NAVVGAYCWSMKMADAYRMVADMRKFGVGPNSRTYDIILHHLIKNRRSKEAYSIFQKMSS 438
             ++  +    K+   Y ++ +M++ G  P+ +TY+ ++  +   +  +    I+ KM  
Sbjct: 407 TCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQ 466

Query: 439 DPGCEPTVSTYEIMVRMFCNEERVDMAIRIWDEMKAKGVLPGMHMFSTLINSLCHENKLE 498
           +   EP++ T+ ++++ +      +M   +WDEM  KG+ P  + ++ LI  L  E K  
Sbjct: 467 NE-IEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSR 526

Query: 499 DACKYFQEMLDVGIRPP 514
           +AC+Y +EMLD G++ P
Sbjct: 527 EACRYLEEMLDKGMKTP 541

BLAST of Lsi09G006500 vs. TrEMBL
Match: A0A0A0KUY5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G571490 PE=4 SV=1)

HSP 1 Score: 917.1 bits (2369), Expect = 9.8e-264
Identity = 467/550 (84.91%), Postives = 506/550 (92.00%), Query Frame = 1

Query: 1   MDFRRSLSSLRRLSQRTSSFHSLSASSSHSASARSVSCSKTITTNQSSISISSRSNEHST 60
           M FR+SLSSL+RL  RTSSF          ASARSVSCSKTIT NQ+SI ISS  NEHST
Sbjct: 1   MGFRQSLSSLQRLFPRTSSFQY--------ASARSVSCSKTITKNQTSICISSHCNEHST 60

Query: 61  GLIPNRNDASHHFTNHGTEHSKQDSESNQNSTMESAEIAQDAEKLCKLISKNPNSCIESL 120
            LIPNRN  SH  T+H  EHSKQD +++Q S +ES EIAQDAEK CKLISKNPNSCIESL
Sbjct: 61  LLIPNRNYTSHRSTHHRIEHSKQDLKASQKSIVESDEIAQDAEKFCKLISKNPNSCIESL 120

Query: 121 LDGASMEVSLALVVEVLKKLSNAGFLALSFFRWAEKQKGFKHTTESYNWLIESLGKIKQF 180
           LDGA ME+S AL+VEVLKKLSNAGFLALSFFRWAEKQKGFKHTTESYN LIE+LGKIKQF
Sbjct: 121 LDGAPMELSPALIVEVLKKLSNAGFLALSFFRWAEKQKGFKHTTESYNLLIEALGKIKQF 180

Query: 181 NVIWNLVSDMKRKGILSRETFALISRRYARARKVKEAIDSFEKMEKFGFQLGVSDFNRLI 240
           NVIWNLVSDMKRKGILSRETFALI+RRYARARKVKEA++SFEKMEKFGFQ+GVSDFNRL+
Sbjct: 181 NVIWNLVSDMKRKGILSRETFALITRRYARARKVKEAVESFEKMEKFGFQMGVSDFNRLL 240

Query: 241 DTLSKSRNVEKAQEVFDKMKHRRFKPDIKSYTILLEGWGQDQNLLRLNEVYREMRDDGFE 300
           DTL KSRNV+KAQEVFDKMKH RFKPDIKSYTILLEGWGQDQNLL+LNEVYREMRD+GFE
Sbjct: 241 DTLCKSRNVKKAQEVFDKMKHGRFKPDIKSYTILLEGWGQDQNLLKLNEVYREMRDEGFE 300

Query: 301 PDVVTFGIIINAHCKAKKYDEAIRLFHEMKAKNVKPSPHVFCTLINGLGSEKRLSEALEF 360
           PDVVTFGI+INAHCKA+KYDEAIRLFHEM+AKN+KPSPHVFCTLINGLGSEKRL EALEF
Sbjct: 301 PDVVTFGILINAHCKARKYDEAIRLFHEMEAKNIKPSPHVFCTLINGLGSEKRLKEALEF 360

Query: 361 FEQSKLSGFALEAPTYNAVVGAYCWSMKMADAYRMVADMRKFGVGPNSRTYDIILHHLIK 420
           FEQ KLSGFA EAPTYNAVVGAYCWSMKMA AYRMV +MRK GVGPNSRTYDIILHHLIK
Sbjct: 361 FEQLKLSGFAPEAPTYNAVVGAYCWSMKMAYAYRMVDEMRKSGVGPNSRTYDIILHHLIK 420

Query: 421 NRRSKEAYSIFQKMSSDPGCEPTVSTYEIMVRMFCNEERVDMAIRIWDEMKAKGVLPGMH 480
            R+SKEAYS+FQ+MS +PGCEPT+STY+IM+RMFCNEERVDMAI+IWDEMKAKGVLPGMH
Sbjct: 421 GRKSKEAYSVFQRMSREPGCEPTLSTYDIMIRMFCNEERVDMAIQIWDEMKAKGVLPGMH 480

Query: 481 MFSTLINSLCHENKLEDACKYFQEMLDVGIRPPAAMFSNLKQALIDEGRKDTALLLAEKI 540
           +FSTLINSLCHE+KLEDAC YFQEMLDVGIRPPA MFSNLKQAL+D+GRKDTALL+AEKI
Sbjct: 481 LFSTLINSLCHEHKLEDACTYFQEMLDVGIRPPATMFSNLKQALLDDGRKDTALLMAEKI 540

Query: 541 EKLRKAPLLG 551
           +KLRKAPL+G
Sbjct: 541 KKLRKAPLVG 542

BLAST of Lsi09G006500 vs. TrEMBL
Match: F6HFJ5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g04690 PE=4 SV=1)

HSP 1 Score: 712.2 bits (1837), Expect = 4.8e-202
Identity = 349/495 (70.51%), Postives = 425/495 (85.86%), Query Frame = 1

Query: 56  NEHSTGLIPNRNDASHHFTNHGTEHSKQDSESNQNSTMESAEIAQDAEKLCKLISKNPNS 115
           NE+S G  P     S   + HG     Q      ++T  +  IAQD  KLCKL+  + NS
Sbjct: 43  NENSCGFSP----FSFCRSIHGGSIRNQACTETTDAT--NHHIAQDTGKLCKLLCTHSNS 102

Query: 116 CIESLLDGASMEVSLALVVEVLKKLSNAGFLALSFFRWAEKQKGFKHTTESYNWLIESLG 175
            IESLL+GAS++VS  LV+EVLKKLSN+G +ALSFFRWAEKQKGFK++TE+YN LIE+LG
Sbjct: 103 SIESLLNGASVDVSPTLVLEVLKKLSNSGVIALSFFRWAEKQKGFKYSTENYNALIEALG 162

Query: 176 KIKQFNVIWNLVSDMKRKGILSRETFALISRRYARARKVKEAIDSFEKMEKFGFQLGVSD 235
           KIKQF +IWNLV+DM+ KG+L++ETFALISRRYARARKVKEA+++FEKMEKFG Q  +SD
Sbjct: 163 KIKQFKMIWNLVNDMRSKGLLTQETFALISRRYARARKVKEAVETFEKMEKFGLQPVLSD 222

Query: 236 FNRLIDTLSKSRNVEKAQEVFDKMKHRRFKPDIKSYTILLEGWGQDQNLLRLNEVYREMR 295
           FNRL+D L KSR+VE+AQEVFDKMK R+F+PDIKSYTILLEGWGQ+QNLLRL+EVYREM+
Sbjct: 223 FNRLLDALCKSRHVERAQEVFDKMKDRKFRPDIKSYTILLEGWGQEQNLLRLDEVYREMK 282

Query: 296 DDGFEPDVVTFGIIINAHCKAKKYDEAIRLFHEMKAKNVKPSPHVFCTLINGLGSEKRLS 355
           D+GFEPD VT+GI+INAHCKA++YD A+ LFH+M+A    P+PH++CTLINGLGSE+RL+
Sbjct: 283 DEGFEPDAVTYGILINAHCKARRYDAAVELFHKMEANKCMPTPHIYCTLINGLGSERRLT 342

Query: 356 EALEFFEQSKLSGFALEAPTYNAVVGAYCWSMKMADAYRMVADMRKFGVGPNSRTYDIIL 415
           EAL+FFE+SK SGF  EAPTYNAVVG+YC SM+M DAYR+V +MRK GVGP +RTYDIIL
Sbjct: 343 EALQFFERSKASGFTPEAPTYNAVVGSYCQSMRMDDAYRIVDEMRKCGVGPQTRTYDIIL 402

Query: 416 HHLIKNRRSKEAYSIFQKMSSDPGCEPTVSTYEIMVRMFCNEERVDMAIRIWDEMKAKGV 475
           HHLIK RR+KEAY +FQ MSS+PGCEP+VSTYEI+VRMFCNEERVDMA+R+WDEMKAKGV
Sbjct: 403 HHLIKARRTKEAYRVFQGMSSEPGCEPSVSTYEIVVRMFCNEERVDMALRVWDEMKAKGV 462

Query: 476 LPGMHMFSTLINSLCHENKLEDACKYFQEMLDVGIRPPAAMFSNLKQALIDEGRKDTALL 535
           LPGMHMFSTLINSLC+ENKL++ACKYF EMLD+GIRPPAAMFSNLKQ L+DEG++D  L+
Sbjct: 463 LPGMHMFSTLINSLCYENKLDEACKYFHEMLDMGIRPPAAMFSNLKQTLLDEGKQDMVLI 522

Query: 536 LAEKIEKLRKAPLLG 551
           LA+K++K+R   ++G
Sbjct: 523 LAQKLDKIRTTQVIG 531

BLAST of Lsi09G006500 vs. TrEMBL
Match: A0A061E7F9_THECC (Pentatricopeptide repeat-containing protein, putative isoform 1 OS=Theobroma cacao GN=TCM_010824 PE=4 SV=1)

HSP 1 Score: 710.7 bits (1833), Expect = 1.4e-201
Identity = 341/454 (75.11%), Postives = 406/454 (89.43%), Query Frame = 1

Query: 97  EIAQDAEKLCKLISKNPNSCIESLLDGASMEVSLALVVEVLKKLSNAGFLALSFFRWAEK 156
           ++ +DA K+CKL+S   +  ++ LL+ AS+EVS +LV EVLK+LSNAG +A+SFF WAEK
Sbjct: 89  KLEEDAAKICKLLSSRSDIHVDKLLENASIEVSPSLVAEVLKRLSNAGVIAMSFFTWAEK 148

Query: 157 QKGFKHTTESYNWLIESLGKIKQFNVIWNLVSDMKRKGILSRETFALISRRYARARKVKE 216
           QKGFK+ TESYN LIE+LGKIKQF +IWNL++DMK   +LS++TFALISRRYARARKV+E
Sbjct: 149 QKGFKYNTESYNALIEALGKIKQFKLIWNLLNDMKSSKLLSKDTFALISRRYARARKVEE 208

Query: 217 AIDSFEKMEKFGFQLGVSDFNRLIDTLSKSRNVEKAQEVFDKMKHRRFKPDIKSYTILLE 276
           AI++FE+ME+FGF+L  SDFNRLIDTLSKSR+VEKA +VFDKMK RRF PDIKSYTILLE
Sbjct: 209 AIEAFERMEEFGFKLDTSDFNRLIDTLSKSRHVEKANKVFDKMKKRRFVPDIKSYTILLE 268

Query: 277 GWGQDQNLLRLNEVYREMRDDGFEPDVVTFGIIINAHCKAKKYDEAIRLFHEMKAKNVKP 336
           GWG++ NLLRL+EVYREM+D+GFEPDVVT+GI+INA+CKAKKY+ A+ LFHEM+AKN KP
Sbjct: 269 GWGKEHNLLRLDEVYREMKDEGFEPDVVTYGILINAYCKAKKYNRAVELFHEMEAKNCKP 328

Query: 337 SPHVFCTLINGLGSEKRLSEALEFFEQSKLSGFALEAPTYNAVVGAYCWSMKMADAYRMV 396
           SPHVFCTLINGLGSEKRLSEALEFFE+SK  GFA EAPTYN++VGAYCWSM+M DA+R++
Sbjct: 329 SPHVFCTLINGLGSEKRLSEALEFFERSKSCGFAPEAPTYNSLVGAYCWSMQMDDAFRVI 388

Query: 397 ADMRKFGVGPNSRTYDIILHHLIKNRRSKEAYSIFQKMSSDPGCEPTVSTYEIMVRMFCN 456
            +MR+  VGPNSRTYDIILHHLIK RR KEAY +FQKM+S+PGC PTVSTYEI+VRMFCN
Sbjct: 389 GEMRRNLVGPNSRTYDIILHHLIKARRMKEAYLVFQKMTSEPGCVPTVSTYEIIVRMFCN 448

Query: 457 EERVDMAIRIWDEMKAKGVLPGMHMFSTLINSLCHENKLEDACKYFQEMLDVGIRPPAAM 516
           EE+VDMA+ +W +MKA+GVLPGMHMFS LINSLCH +KL+DACKYFQEMLD GIRPPA M
Sbjct: 449 EEQVDMAMLVWAQMKAEGVLPGMHMFSDLINSLCHNSKLDDACKYFQEMLDAGIRPPAKM 508

Query: 517 FSNLKQALIDEGRKDTALLLAEKIEKLRKAPLLG 551
           FSNLKQAL+DEG+KDTAL LA KI+KLRK PL+G
Sbjct: 509 FSNLKQALLDEGKKDTALNLARKIDKLRKMPLVG 542

BLAST of Lsi09G006500 vs. TrEMBL
Match: B9SYJ4_RICCO (Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCOM_1288600 PE=4 SV=1)

HSP 1 Score: 702.2 bits (1811), Expect = 5.0e-199
Identity = 339/463 (73.22%), Postives = 408/463 (88.12%), Query Frame = 1

Query: 85  SESNQNSTMESAEIAQDAEKLCKLISKNPNSCIESLLDGASMEVSLALVVEVLKKLSNAG 144
           ++  QN  + + +I +D   +C+L+SKNPNS IE LL GAS +VS ALV+EVLK+LSNAG
Sbjct: 68  ADLEQNPEIFTDKIIEDTRNICRLLSKNPNSSIEKLLLGASFKVSPALVLEVLKRLSNAG 127

Query: 145 FLALSFFRWAEKQKGFKHTTESYNWLIESLGKIKQFNVIWNLVSDMKRKGILSRETFALI 204
            LALSFF+WAEKQKGF + TESYN LI+SLGKIKQFN+IWNLV+DMKRKG+L++ETFALI
Sbjct: 128 ALALSFFKWAEKQKGFMYNTESYNALIDSLGKIKQFNMIWNLVNDMKRKGVLTKETFALI 187

Query: 205 SRRYARARKVKEAIDSFEKMEKFGFQLGVSDFNRLIDTLSKSRNVEKAQEVFDKMKHRRF 264
           SRRYAR+ KVKEA+++FEKMEKFG ++  +DFNRL+DTL KSR V  AQ VFDKMK RRF
Sbjct: 188 SRRYARSGKVKEAMNTFEKMEKFGLKIESTDFNRLLDTLIKSRQVLSAQNVFDKMKIRRF 247

Query: 265 KPDIKSYTILLEGWGQDQNLLRLNEVYREMRDDGFEPDVVTFGIIINAHCKAKKYDEAIR 324
            PDIKSYTILLEGWGQ++NLL+L+EVYREM+D+GFEPDVVT+GI+INA+CK +KYD+AI 
Sbjct: 248 VPDIKSYTILLEGWGQEKNLLKLDEVYREMKDEGFEPDVVTYGILINAYCKVRKYDDAIE 307

Query: 325 LFHEMKAKNVKPSPHVFCTLINGLGSEKRLSEALEFFEQSKLSGFALEAPTYNAVVGAYC 384
           LF EM++KN +PSPH+FCTLINGLGS +RLSEALEFF +SK SGFA E PTYNAVVGAYC
Sbjct: 308 LFREMESKNCQPSPHIFCTLINGLGSVRRLSEALEFFRRSKASGFAPETPTYNAVVGAYC 367

Query: 385 WSMKMADAYRMVADMRKFGVGPNSRTYDIILHHLIKNRRSKEAYSIFQKMSSDPGCEPTV 444
           WSM++ DAYRMV +MRK GVGPNSRTYDIILHHLIK  ++ EA+S+F+KMSS+  CEPTV
Sbjct: 368 WSMRIDDAYRMVDEMRKSGVGPNSRTYDIILHHLIKAEKTTEAFSVFEKMSSEEECEPTV 427

Query: 445 STYEIMVRMFCNEERVDMAIRIWDEMKAKGVLPGMHMFSTLINSLCHENKLEDACKYFQE 504
           STY+I+VRMFCN ++V+ AI++WD MKAKGV PGMHMFS LINSLCHENKL+ ACKYFQE
Sbjct: 428 STYDIIVRMFCNMDKVESAIKVWDRMKAKGVHPGMHMFSILINSLCHENKLDIACKYFQE 487

Query: 505 MLDVGIRPPAAMFSNLKQALIDEGRKDTALLLAEKIEKLRKAP 548
           MLDVGIRPPAA+FS+LKQALI++GRKDT +LLA+KI+KLRK P
Sbjct: 488 MLDVGIRPPAALFSHLKQALIEDGRKDTVVLLAQKIDKLRKTP 530

BLAST of Lsi09G006500 vs. TrEMBL
Match: B9HW85_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s12490g PE=4 SV=2)

HSP 1 Score: 698.7 bits (1802), Expect = 5.5e-198
Identity = 344/484 (71.07%), Postives = 413/484 (85.33%), Query Frame = 1

Query: 72  HFTNHGTEHSKQDSE------SNQNSTMESAEIAQDAEKLCKLISKNPNSCIESLLDGAS 131
           HF  H + H+           SNQ   + + +I +DAE +CKL+SKNPNS +E+LL+ AS
Sbjct: 5   HFIVHKSTHTDLQQTVVLTDASNQTPQVLADKIVEDAENICKLLSKNPNSSVEALLNKAS 64

Query: 132 MEVSLALVVEVLKKLSNAGFLALSFFRWAEKQKGFKHTTESYNWLIESLGKIKQFNVIWN 191
           MEVS +LV E LKKLSNAG LALSFFRWAEKQKGF+++TESY+ LIESLGKIKQFNVIWN
Sbjct: 65  MEVSPSLVFEALKKLSNAGALALSFFRWAEKQKGFQYSTESYHALIESLGKIKQFNVIWN 124

Query: 192 LVSDMKRKGILSRETFALISRRYARARKVKEAIDSFEKMEKFGFQLGVSDFNRLIDTLSK 251
           LV+DMK+KG+L++ETFALISRRYARARKVKEA+D+F KMEKFG ++  SD NRL+DTL K
Sbjct: 125 LVTDMKQKGLLNKETFALISRRYARARKVKEAVDAFMKMEKFGLKIESSDVNRLLDTLCK 184

Query: 252 SRNVEKAQEVFDKMKHRRFKPDIKSYTILLEGWGQDQNLLRLNEVYREMRDDGFEPDVVT 311
           SR VE+AQ VFDKM  R F  DIKSYTILLEGWGQ++NL RL EVY EM+D+GFEPDVVT
Sbjct: 185 SRQVERAQLVFDKMNKRGFVADIKSYTILLEGWGQEKNLSRLMEVYNEMKDEGFEPDVVT 244

Query: 312 FGIIINAHCKAKKYDEAIRLFHEMKAKNVKPSPHVFCTLINGLGSEKRLSEALEFFEQSK 371
           +GI+INAHCK+++YD+AI LFHEM+AKN KPSPH++CTLINGLG+EKRLSEALEFFE SK
Sbjct: 245 YGILINAHCKSRRYDDAIELFHEMEAKNCKPSPHIYCTLINGLGAEKRLSEALEFFELSK 304

Query: 372 LSGFALEAPTYNAVVGAYCWSMKMADAYRMVADMRKFGVGPNSRTYDIILHHLIKNRRSK 431
            SGF  EAPTYNAVVGAYCWS +M D  R + +MRK GVGP++RTYDIILHHLI+  ++K
Sbjct: 305 ASGFVPEAPTYNAVVGAYCWSERMDDVQRTIDEMRKGGVGPSARTYDIILHHLIRAGKTK 364

Query: 432 EAYSIFQKMSSDPGCEPTVSTYEIMVRMFCNEERVDMAIRIWDEMKAKGVLPGMHMFSTL 491
            AYS+FQKMS + GCEP+VSTYEI+VRMFCNE+RVDMAI++WD+MKAKG+LP MHMFSTL
Sbjct: 365 IAYSVFQKMSCE-GCEPSVSTYEIIVRMFCNEDRVDMAIKVWDQMKAKGILPVMHMFSTL 424

Query: 492 INSLCHENKLEDACKYFQEMLDVGIRPPAAMFSNLKQALIDEGRKDTALLLAEKIEKLRK 550
           INSLCHE+KL++AC YFQEMLDVGIRPPA +FSNLKQ L+DEG+KDT ++   K++KLRK
Sbjct: 425 INSLCHESKLDEACMYFQEMLDVGIRPPAQLFSNLKQNLLDEGKKDTVVVFERKLDKLRK 484

BLAST of Lsi09G006500 vs. TAIR10
Match: AT1G71060.1 (AT1G71060.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 676.0 bits (1743), Expect = 1.9e-194
Identity = 339/498 (68.07%), Postives = 417/498 (83.73%), Query Frame = 1

Query: 53  SRSNEHSTGLIPNRNDASHHFTNHGTEHSKQDSESNQNSTMESAEIAQDAEKLCKLISKN 112
           S S+  S   IP  + AS+ FT +G+ H+     S+  + + + + +QDAE++CK+++K 
Sbjct: 23  SSSSSPSLESIPWIHKASN-FTLYGSFHA-----SSVETQVSANDASQDAERICKILTKF 82

Query: 113 PNSCIESLLDGASMEVSLALVVEVLKKLSNAGFLALSFFRWAEKQKGFKHTTESYNWLIE 172
            +S +E+LL+ AS+++S AL+ EVLKKLSNAG LALS F+WAE QKGFKHTT +YN LIE
Sbjct: 83  TDSKVETLLNEASVKLSPALIEEVLKKLSNAGVLALSVFKWAENQKGFKHTTSNYNALIE 142

Query: 173 SLGKIKQFNVIWNLVSDMKRKGILSRETFALISRRYARARKVKEAIDSFEKMEKFGFQLG 232
           SLGKIKQF +IW+LV DMK K +LS+ETFALISRRYARARKVKEAI +F KME+FGF++ 
Sbjct: 143 SLGKIKQFKLIWSLVDDMKAKKLLSKETFALISRRYARARKVKEAIGAFHKMEEFGFKME 202

Query: 233 VSDFNRLIDTLSKSRNVEKAQEVFDKMKHRRFKPDIKSYTILLEGWGQDQNLLRLNEVYR 292
            SDFNR++DTLSKSRNV  AQ+VFDKMK +RF+PDIKSYTILLEGWGQ+ NLLR++EV R
Sbjct: 203 SSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNR 262

Query: 293 EMRDDGFEPDVVTFGIIINAHCKAKKYDEAIRLFHEMKAKNVKPSPHVFCTLINGLGSEK 352
           EM+D+GFEPDVV +GIIINAHCKAKKY+EAIR F+EM+ +N KPSPH+FC+LINGLGSEK
Sbjct: 263 EMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEK 322

Query: 353 RLSEALEFFEQSKLSGFALEAPTYNAVVGAYCWSMKMADAYRMVADMRKFGVGPNSRTYD 412
           +L++ALEFFE+SK SGF LEAPTYNA+VGAYCWS +M DAY+ V +MR  GVGPN+RTYD
Sbjct: 323 KLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYD 382

Query: 413 IILHHLIKNRRSKEAYSIFQKMSSDPGCEPTVSTYEIMVRMFCNEERVDMAIRIWDEMKA 472
           IILHHLI+ +RSKEAY ++Q MS    CEPTVSTYEIMVRMFCN+ER+DMAI+IWDEMK 
Sbjct: 383 IILHHLIRMQRSKEAYEVYQTMS----CEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKG 442

Query: 473 KGVLPGMHMFSTLINSLCHENKLEDACKYFQEMLDVGIRPPAAMFSNLKQALIDEGRKDT 532
           KGVLPGMHMFS+LI +LCHENKL++AC+YF EMLDVGIRPP  MFS LKQ L+DEGRKD 
Sbjct: 443 KGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDK 502

Query: 533 ALLLAEKIEKLRKAPLLG 551
              L  K+++LRK  L+G
Sbjct: 503 VTDLVVKMDRLRKTQLVG 510

BLAST of Lsi09G006500 vs. TAIR10
Match: AT1G77360.1 (AT1G77360.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 385.6 bits (989), Expect = 5.2e-107
Identity = 185/459 (40.31%), Postives = 296/459 (64.49%), Query Frame = 1

Query: 90  NSTMESAEIAQDAEKLCKLISKNPNSCIESLLDGASMEVSLALVVEVLKKLSNAGFLALS 149
           +S+ +  ++A  A+ + K++  +P   ++S LD + + VS  +V +VL +  NAG L   
Sbjct: 60  SSSEQVRDVADVAKNISKVLMSSPQLVLDSALDQSGLRVSQEVVEDVLNRFRNAGLLTYR 119

Query: 150 FFRWAEKQKGFKHTTESYNWLIESLGKIKQFNVIWNLVSDMKRKGILSRETFALISRRYA 209
           FF+W+EKQ+ ++H+  +Y+ +IES  KI+Q+ ++W+L++ M++K +L+ ETF ++ R+YA
Sbjct: 120 FFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKMLNVETFCIVMRKYA 179

Query: 210 RARKVKEAIDSFEKMEKFGFQLGVSDFNRLIDTLSKSRNVEKAQEVFDKMKHRRFKPDIK 269
           RA+KV EAI +F  MEK+     +  FN L+  L KS+NV KAQEVF+ M+ R F PD K
Sbjct: 180 RAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDR-FTPDSK 239

Query: 270 SYTILLEGWGQDQNLLRLNEVYREMRDDGFEPDVVTFGIIINAHCKAKKYDEAIRLFHEM 329
           +Y+ILLEGWG++ NL +  EV+REM D G  PD+VT+ I+++  CKA + DEA+ +   M
Sbjct: 240 TYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSM 299

Query: 330 KAKNVKPSPHVFCTLINGLGSEKRLSEALEFFEQSKLSGFALEAPTYNAVVGAYCWSMKM 389
                KP+  ++  L++  G+E RL EA++ F + + SG   +   +N+++GA+C + +M
Sbjct: 300 DPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRM 359

Query: 390 ADAYRMVADMRKFGVGPNSRTYDIILHHLIKNRRSKEAYSIFQKMSSDPGCEPTVSTYEI 449
            + YR++ +M+  GV PNS++ +IIL HLI+     EA+ +F+KM     CEP   TY +
Sbjct: 360 KNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIK--VCEPDADTYTM 419

Query: 450 MVRMFCNEERVDMAIRIWDEMKAKGVLPGMHMFSTLINSLCHENKLEDACKYFQEMLDVG 509
           +++MFC ++ ++ A ++W  M+ KGV P MH FS LIN LC E   + AC   +EM+++G
Sbjct: 420 VIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMG 479

Query: 510 IRPPAAMFSNLKQALIDEGRKDTALLLAEKIEKLRKAPL 549
           IRP    F  L+Q LI E R+D    L EK+  L   PL
Sbjct: 480 IRPSGVTFGRLRQLLIKEEREDVLKFLNEKMNVLVNEPL 515

BLAST of Lsi09G006500 vs. TAIR10
Match: AT3G62470.1 (AT3G62470.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 261.2 bits (666), Expect = 1.5e-69
Identity = 131/437 (29.98%), Postives = 255/437 (58.35%), Query Frame = 1

Query: 79  EHSKQDSESNQNSTMESAEIAQDAEKLCKLISK--NPNSCIESLLDGASMEVSLALVVEV 138
           E    + E    S +ES+   ++ E++CK+I +    +  +E++LD   +++S  L+VEV
Sbjct: 108 ESECDNDEETGVSCVESSTNPEEVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEV 167

Query: 139 LKKLSNAGFLALSFFRWAEKQKGFKHTTESYNWLIESLGKIKQFNVIWNLVSDMKRKGIL 198
           L++  +A   A  FF WA +++GF H + +YN ++  L K +QF  + +++ +M  KG+L
Sbjct: 168 LERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL 227

Query: 199 SRETFALISRRYARARKVKEAIDSFEKMEKFGFQLGVSDFNRLIDTLSKSRNVEKAQEVF 258
           + ETF +  + +A A++ K+A+  FE M+K+ F++GV   N L+D+L +++  ++AQ +F
Sbjct: 228 TMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLF 287

Query: 259 DKMKHRRFKPDIKSYTILLEGWGQDQNLLRLNEVYREMRDDGFEPDVVTFGIIINAHCKA 318
           DK+K  RF P++ +YT+LL GW + +NL+    ++ +M D G +PD+V   +++    ++
Sbjct: 288 DKLK-ERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRS 347

Query: 319 KKYDEAIRLFHEMKAKNVKPSPHVFCTLINGLGSEKRLSEALEFFEQSKLSGFALEAPTY 378
           +K  +AI+LFH MK+K   P+   +  +I     +  +  A+E+F+    SG   +A  Y
Sbjct: 348 RKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVY 407

Query: 379 NAVVGAYCWSMKMADAYRMVADMRKFGVGPNSRTYDIILHHLIKNRRSKEAYSIFQKMSS 438
             ++  +    K+   Y ++ +M++ G  P+ +TY+ ++  +   +  + A  I+ KM  
Sbjct: 408 TCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQ 467

Query: 439 DPGCEPTVSTYEIMVRMFCNEERVDMAIRIWDEMKAKGVLPGMHMFSTLINSLCHENKLE 498
           +   EP++ T+ ++++ +      +M   +W+EM  KG+ P  + ++ LI  L  E K  
Sbjct: 468 NE-IEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSR 527

Query: 499 DACKYFQEMLDVGIRPP 514
           +AC+Y +EMLD G++ P
Sbjct: 528 EACRYLEEMLDKGMKTP 542

BLAST of Lsi09G006500 vs. TAIR10
Match: AT3G62540.1 (AT3G62540.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 260.0 bits (663), Expect = 3.3e-69
Identity = 131/437 (29.98%), Postives = 253/437 (57.89%), Query Frame = 1

Query: 79  EHSKQDSESNQNSTMESAEIAQDAEKLCKLISK--NPNSCIESLLDGASMEVSLALVVEV 138
           E    + E    S +ES+   ++ E++CK+I +    +  +E++LD   +++S  L+VEV
Sbjct: 108 ESECDNDEETGVSCVESSTNPEEVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEV 167

Query: 139 LKKLSNAGFLALSFFRWAEKQKGFKHTTESYNWLIESLGKIKQFNVIWNLVSDMKRKGIL 198
           L++  +A   A  FF WA +++GF H + +YN ++  L K +QF  + +++ +M  KG+L
Sbjct: 168 LERFRHARKPAFRFFCWAAERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL 227

Query: 199 SRETFALISRRYARARKVKEAIDSFEKMEKFGFQLGVSDFNRLIDTLSKSRNVEKAQEVF 258
           + ETF +  + +A A++ K+A+  FE M+K+ F++GV   N L+D+L +++  ++AQ +F
Sbjct: 228 TMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLF 287

Query: 259 DKMKHRRFKPDIKSYTILLEGWGQDQNLLRLNEVYREMRDDGFEPDVVTFGIIINAHCKA 318
           DK+K  RF P++ +YT+LL GW + +NL+    ++ +M D G +PD+V   +++    ++
Sbjct: 288 DKLK-ERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRS 347

Query: 319 KKYDEAIRLFHEMKAKNVKPSPHVFCTLINGLGSEKRLSEALEFFEQSKLSGFALEAPTY 378
            K  +AI+LFH MK+K   P+   +  +I     +  +  A+E+F+    SG   +A  Y
Sbjct: 348 MKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVY 407

Query: 379 NAVVGAYCWSMKMADAYRMVADMRKFGVGPNSRTYDIILHHLIKNRRSKEAYSIFQKMSS 438
             ++  +    K+   Y ++ +M++ G  P+ +TY+ ++  +   +  +    I+ KM  
Sbjct: 408 TCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQ 467

Query: 439 DPGCEPTVSTYEIMVRMFCNEERVDMAIRIWDEMKAKGVLPGMHMFSTLINSLCHENKLE 498
           +   EP++ T+ ++++ +      +M   +WDEM  KG+ P  + ++ LI  L  E K  
Sbjct: 468 NE-IEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSR 527

Query: 499 DACKYFQEMLDVGIRPP 514
           +AC+Y +EMLD G++ P
Sbjct: 528 EACRYLEEMLDKGMKTP 542

BLAST of Lsi09G006500 vs. TAIR10
Match: AT5G14820.1 (AT5G14820.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 259.6 bits (662), Expect = 4.3e-69
Identity = 131/437 (29.98%), Postives = 253/437 (57.89%), Query Frame = 1

Query: 79  EHSKQDSESNQNSTMESAEIAQDAEKLCKLISK--NPNSCIESLLDGASMEVSLALVVEV 138
           E    + E    S +ES+   ++ E++CK+I +    +  +E++LD   +++S  L+VEV
Sbjct: 107 ESECDNDEETGVSCVESSTNPEEVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEV 166

Query: 139 LKKLSNAGFLALSFFRWAEKQKGFKHTTESYNWLIESLGKIKQFNVIWNLVSDMKRKGIL 198
           L++  +A   A  FF WA +++GF H + +YN ++  L K +QF  + +++ +M  KG+L
Sbjct: 167 LERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL 226

Query: 199 SRETFALISRRYARARKVKEAIDSFEKMEKFGFQLGVSDFNRLIDTLSKSRNVEKAQEVF 258
           + ETF +  + +A A++ K+A+  FE M+K+ F++GV   N L+D+L +++  ++AQ +F
Sbjct: 227 TMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLF 286

Query: 259 DKMKHRRFKPDIKSYTILLEGWGQDQNLLRLNEVYREMRDDGFEPDVVTFGIIINAHCKA 318
           DK+K  RF P++ +YT+LL GW + +NL+    ++ +M D G +PD+V   +++    ++
Sbjct: 287 DKLK-ERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRS 346

Query: 319 KKYDEAIRLFHEMKAKNVKPSPHVFCTLINGLGSEKRLSEALEFFEQSKLSGFALEAPTY 378
            K  +AI+LFH MK+K   P+   +  +I     +  +  A+E+F+    SG   +A  Y
Sbjct: 347 MKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVY 406

Query: 379 NAVVGAYCWSMKMADAYRMVADMRKFGVGPNSRTYDIILHHLIKNRRSKEAYSIFQKMSS 438
             ++  +    K+   Y ++ +M++ G  P+ +TY+ ++  +   +  +    I+ KM  
Sbjct: 407 TCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQ 466

Query: 439 DPGCEPTVSTYEIMVRMFCNEERVDMAIRIWDEMKAKGVLPGMHMFSTLINSLCHENKLE 498
           +   EP++ T+ ++++ +      +M   +WDEM  KG+ P  + ++ LI  L  E K  
Sbjct: 467 NE-IEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSR 526

Query: 499 DACKYFQEMLDVGIRPP 514
           +AC+Y +EMLD G++ P
Sbjct: 527 EACRYLEEMLDKGMKTP 541

BLAST of Lsi09G006500 vs. NCBI nr
Match: gi|659072880|ref|XP_008467144.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g71060, mitochondrial [Cucumis melo])

HSP 1 Score: 921.0 bits (2379), Expect = 9.8e-265
Identity = 471/550 (85.64%), Postives = 501/550 (91.09%), Query Frame = 1

Query: 1   MDFRRSLSSLRRLSQRTSSFHSLSASSSHSASARSVSCSKTITTNQSSISISSRSNEHST 60
           M FRRSLSSL+RL  RTSSF          ASARS SCSKTIT NQ+SI ISSR NEHST
Sbjct: 1   MGFRRSLSSLQRLFPRTSSFQY--------ASARSFSCSKTITRNQTSICISSRCNEHST 60

Query: 61  GLIPNRNDASHHFTNHGTEHSKQDSESNQNSTMESAEIAQDAEKLCKLISKNPNSCIESL 120
             I NRN  S H T+HG EHSKQD E+ Q S MES EI QDAEK CKLISKNPNSCIESL
Sbjct: 61  WPILNRNYTSQHSTHHGNEHSKQDLEAGQKSIMESDEITQDAEKFCKLISKNPNSCIESL 120

Query: 121 LDGASMEVSLALVVEVLKKLSNAGFLALSFFRWAEKQKGFKHTTESYNWLIESLGKIKQF 180
           LDGA++E+S AL+ EVLKKL NAGFLALSFFRWAEKQKGFKHTTESYN LIE+LGKIKQF
Sbjct: 121 LDGAALELSPALIEEVLKKLCNAGFLALSFFRWAEKQKGFKHTTESYNCLIEALGKIKQF 180

Query: 181 NVIWNLVSDMKRKGILSRETFALISRRYARARKVKEAIDSFEKMEKFGFQLGVSDFNRLI 240
           NVIWNLVSDMKRKGILSRETFALI+RRYARARKVKEAI+SFEKMEKFGFQLGVSDFNRLI
Sbjct: 181 NVIWNLVSDMKRKGILSRETFALITRRYARARKVKEAIESFEKMEKFGFQLGVSDFNRLI 240

Query: 241 DTLSKSRNVEKAQEVFDKMKHRRFKPDIKSYTILLEGWGQDQNLLRLNEVYREMRDDGFE 300
           DTL KSRNV+KAQEVFDKMKH RFKPDIKSYTILLEGWGQDQNLLRLNEVYREMRD+GFE
Sbjct: 241 DTLCKSRNVKKAQEVFDKMKHGRFKPDIKSYTILLEGWGQDQNLLRLNEVYREMRDNGFE 300

Query: 301 PDVVTFGIIINAHCKAKKYDEAIRLFHEMKAKNVKPSPHVFCTLINGLGSEKRLSEALEF 360
           PDVVTFGI+INAHCKA+KYDEAIRLFH+MKAKN+KPSPHVFCTLINGLGSEKRL EALEF
Sbjct: 301 PDVVTFGILINAHCKARKYDEAIRLFHDMKAKNIKPSPHVFCTLINGLGSEKRLKEALEF 360

Query: 361 FEQSKLSGFALEAPTYNAVVGAYCWSMKMADAYRMVADMRKFGVGPNSRTYDIILHHLIK 420
           FEQSKLSGFA EAPTYNAVVGAYCWSMKMADAYRMV DMRK G+GPNSRTYDIILHHLIK
Sbjct: 361 FEQSKLSGFAPEAPTYNAVVGAYCWSMKMADAYRMVDDMRKSGIGPNSRTYDIILHHLIK 420

Query: 421 NRRSKEAYSIFQKMSSDPGCEPTVSTYEIMVRMFCNEERVDMAIRIWDEMKAKGVLPGMH 480
            R+SKEAYS+FQ+MS +PGCEPT+STYEIM+RMFCNEERVDMAI+IWDEMKAKGVLPGMH
Sbjct: 421 GRKSKEAYSVFQRMSREPGCEPTLSTYEIMIRMFCNEERVDMAIQIWDEMKAKGVLPGMH 480

Query: 481 MFSTLINSLCHENKLEDACKYFQEMLDVGIRPPAAMFSNLKQALIDEGRKDTALLLAEKI 540
           +FS LIN LCHENKLEDAC YFQEMLDVGIRPPA MFSNLKQAL+D+GRKDTALLLAEKI
Sbjct: 481 LFSMLINRLCHENKLEDACTYFQEMLDVGIRPPATMFSNLKQALLDDGRKDTALLLAEKI 540

Query: 541 EKLRKAPLLG 551
           +KLRK PL+G
Sbjct: 541 KKLRKTPLVG 542

BLAST of Lsi09G006500 vs. NCBI nr
Match: gi|449465535|ref|XP_004150483.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g71060, mitochondrial [Cucumis sativus])

HSP 1 Score: 917.1 bits (2369), Expect = 1.4e-263
Identity = 467/550 (84.91%), Postives = 506/550 (92.00%), Query Frame = 1

Query: 1   MDFRRSLSSLRRLSQRTSSFHSLSASSSHSASARSVSCSKTITTNQSSISISSRSNEHST 60
           M FR+SLSSL+RL  RTSSF          ASARSVSCSKTIT NQ+SI ISS  NEHST
Sbjct: 1   MGFRQSLSSLQRLFPRTSSFQY--------ASARSVSCSKTITKNQTSICISSHCNEHST 60

Query: 61  GLIPNRNDASHHFTNHGTEHSKQDSESNQNSTMESAEIAQDAEKLCKLISKNPNSCIESL 120
            LIPNRN  SH  T+H  EHSKQD +++Q S +ES EIAQDAEK CKLISKNPNSCIESL
Sbjct: 61  LLIPNRNYTSHRSTHHRIEHSKQDLKASQKSIVESDEIAQDAEKFCKLISKNPNSCIESL 120

Query: 121 LDGASMEVSLALVVEVLKKLSNAGFLALSFFRWAEKQKGFKHTTESYNWLIESLGKIKQF 180
           LDGA ME+S AL+VEVLKKLSNAGFLALSFFRWAEKQKGFKHTTESYN LIE+LGKIKQF
Sbjct: 121 LDGAPMELSPALIVEVLKKLSNAGFLALSFFRWAEKQKGFKHTTESYNLLIEALGKIKQF 180

Query: 181 NVIWNLVSDMKRKGILSRETFALISRRYARARKVKEAIDSFEKMEKFGFQLGVSDFNRLI 240
           NVIWNLVSDMKRKGILSRETFALI+RRYARARKVKEA++SFEKMEKFGFQ+GVSDFNRL+
Sbjct: 181 NVIWNLVSDMKRKGILSRETFALITRRYARARKVKEAVESFEKMEKFGFQMGVSDFNRLL 240

Query: 241 DTLSKSRNVEKAQEVFDKMKHRRFKPDIKSYTILLEGWGQDQNLLRLNEVYREMRDDGFE 300
           DTL KSRNV+KAQEVFDKMKH RFKPDIKSYTILLEGWGQDQNLL+LNEVYREMRD+GFE
Sbjct: 241 DTLCKSRNVKKAQEVFDKMKHGRFKPDIKSYTILLEGWGQDQNLLKLNEVYREMRDEGFE 300

Query: 301 PDVVTFGIIINAHCKAKKYDEAIRLFHEMKAKNVKPSPHVFCTLINGLGSEKRLSEALEF 360
           PDVVTFGI+INAHCKA+KYDEAIRLFHEM+AKN+KPSPHVFCTLINGLGSEKRL EALEF
Sbjct: 301 PDVVTFGILINAHCKARKYDEAIRLFHEMEAKNIKPSPHVFCTLINGLGSEKRLKEALEF 360

Query: 361 FEQSKLSGFALEAPTYNAVVGAYCWSMKMADAYRMVADMRKFGVGPNSRTYDIILHHLIK 420
           FEQ KLSGFA EAPTYNAVVGAYCWSMKMA AYRMV +MRK GVGPNSRTYDIILHHLIK
Sbjct: 361 FEQLKLSGFAPEAPTYNAVVGAYCWSMKMAYAYRMVDEMRKSGVGPNSRTYDIILHHLIK 420

Query: 421 NRRSKEAYSIFQKMSSDPGCEPTVSTYEIMVRMFCNEERVDMAIRIWDEMKAKGVLPGMH 480
            R+SKEAYS+FQ+MS +PGCEPT+STY+IM+RMFCNEERVDMAI+IWDEMKAKGVLPGMH
Sbjct: 421 GRKSKEAYSVFQRMSREPGCEPTLSTYDIMIRMFCNEERVDMAIQIWDEMKAKGVLPGMH 480

Query: 481 MFSTLINSLCHENKLEDACKYFQEMLDVGIRPPAAMFSNLKQALIDEGRKDTALLLAEKI 540
           +FSTLINSLCHE+KLEDAC YFQEMLDVGIRPPA MFSNLKQAL+D+GRKDTALL+AEKI
Sbjct: 481 LFSTLINSLCHEHKLEDACTYFQEMLDVGIRPPATMFSNLKQALLDDGRKDTALLMAEKI 540

Query: 541 EKLRKAPLLG 551
           +KLRKAPL+G
Sbjct: 541 KKLRKAPLVG 542

BLAST of Lsi09G006500 vs. NCBI nr
Match: gi|645276551|ref|XP_008243338.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g71060, mitochondrial [Prunus mume])

HSP 1 Score: 731.1 bits (1886), Expect = 1.4e-207
Identity = 365/519 (70.33%), Postives = 438/519 (84.39%), Query Frame = 1

Query: 40  KTITTNQSSISISSRSN------EHSTGLIPNRNDASHHFTNHGTEHSK-QDSESNQNST 99
           +++TT+  SI  ++ +       E+ +G + NR    +   + G   ++  D  S++   
Sbjct: 39  RSLTTSLQSIKFTNFTRNRTLHTENPSGFLSNRTGGFYRAIHDGLGKTQVPDEASDKIPG 98

Query: 100 MESAEIAQDAEKLCKLIS-KNPNSCIESLLDGASMEVSLALVVEVLKKLSNAGFLALSFF 159
             + EI +DAE++C+++S  N  S I+S LD AS+EVS ALVVEVLKKLSNAG LALSFF
Sbjct: 99  ANNREITEDAERICRILSTSNSKSPIDSFLDSASVEVSTALVVEVLKKLSNAGVLALSFF 158

Query: 160 RWAEKQKGFKHTTESYNWLIESLGKIKQFNVIWNLVSDMKRKGILSRETFALISRRYARA 219
           RWAEKQKGFKHT ESYN LIE+LGKIKQF +IW LV+DMK KG+LS+ETFALISRRY+RA
Sbjct: 159 RWAEKQKGFKHTMESYNALIEALGKIKQFKMIWELVNDMKSKGLLSKETFALISRRYSRA 218

Query: 220 RKVKEAIDSFEKMEKFGFQLGVSDFNRLIDTLSKSRNVEKAQEVFDKMKHRRFKPDIKSY 279
           +KVKEAI++FEKMEKFG ++  SDFNRLIDTLSKSR VEKAQEVFDKMKH RFKPDIKSY
Sbjct: 219 KKVKEAIETFEKMEKFGMKVEGSDFNRLIDTLSKSRQVEKAQEVFDKMKHTRFKPDIKSY 278

Query: 280 TILLEGWGQDQNLLRLNEVYREMRDDGFEPDVVTFGIIINAHCKAKKYDEAIRLFHEMKA 339
           TILLEGWGQ+QN LRLNEVYREM+D+GF+PDVVT GI+INAHCKAKKYDEAI LF EM+A
Sbjct: 279 TILLEGWGQEQNFLRLNEVYREMKDEGFDPDVVTCGILINAHCKAKKYDEAIDLFREMEA 338

Query: 340 KNVKPSPHVFCTLINGLGSEKRLSEALEFFEQSKLSGFALEAPTYNAVVGAYCWSMKMAD 399
           KNVK +PH+FC LINGLGSE+RLSEALEFFE +K SGF  EAPTYNA+VGAYCWSM+M D
Sbjct: 339 KNVKATPHIFCILINGLGSERRLSEALEFFELNKASGFEPEAPTYNALVGAYCWSMRMHD 398

Query: 400 AYRMVADMRKFGVGPNSRTYDIILHHLIKNRRSKEAYSIFQKMSSDPGCEPTVSTYEIMV 459
           A+R+V +MRK G+GPN RTYDIILHHL+K RR+++AYS+FQ++S +PGCEPTVSTYEI+V
Sbjct: 399 AFRVVEEMRKCGIGPNPRTYDIILHHLVKARRTEQAYSVFQQISREPGCEPTVSTYEILV 458

Query: 460 RMFCNEERVDMAIRIWDEMKAKGVLPGMHMFSTLINSLCHENKLEDACKYFQEMLDVGIR 519
           RMFCNE++VDMA+R+WD+MK KGVLPGMHMFSTLINSLCHENKL+DACKYFQEMLDVGIR
Sbjct: 459 RMFCNEDQVDMALRVWDQMKTKGVLPGMHMFSTLINSLCHENKLDDACKYFQEMLDVGIR 518

Query: 520 PPAAMFSNLKQALIDEGRKDTALLLAEKIEKLRKAPLLG 551
           PPA MFSNLKQAL++EGRKD  +    KI++LRK PL+G
Sbjct: 519 PPAQMFSNLKQALLNEGRKDDVISFGLKIDRLRKTPLVG 557

BLAST of Lsi09G006500 vs. NCBI nr
Match: gi|694330949|ref|XP_009356158.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g71060, mitochondrial-like [Pyrus x bretschneideri])

HSP 1 Score: 729.2 bits (1881), Expect = 5.5e-207
Identity = 357/496 (71.98%), Postives = 428/496 (86.29%), Query Frame = 1

Query: 57  EHSTGLIPNRNDASHHFTNHGTEHSKQ-DSESNQNSTMESAEIAQDAEKLCKLIS-KNPN 116
           E+ +G + NR  + H   + G E     D   ++   +++ E+++DAEK+CK++S ++ N
Sbjct: 26  ENPSGFLCNRTASFHRAIHDGLEKPLVIDDAGDKTPLLKNPEVSEDAEKICKILSTRSSN 85

Query: 117 SCIESLLDGASMEVSLALVVEVLKKLSNAGFLALSFFRWAEKQKGFKHTTESYNWLIESL 176
           S IES LDGAS+E S  LVVEVLKKLSN+G LALSFFRWAEKQKGFKH+TESYN LIE+L
Sbjct: 86  SPIESFLDGASVEASPTLVVEVLKKLSNSGVLALSFFRWAEKQKGFKHSTESYNALIEAL 145

Query: 177 GKIKQFNVIWNLVSDMKRKGILSRETFALISRRYARARKVKEAIDSFEKMEKFGFQLGVS 236
           GKIKQF ++W LV++MK KG+LS+ETFALISRRYARA+KVKEAID+FEKM KFG ++  S
Sbjct: 146 GKIKQFKMMWELVNEMKIKGMLSKETFALISRRYARAKKVKEAIDAFEKMAKFGMKVEGS 205

Query: 237 DFNRLIDTLSKSRNVEKAQEVFDKMKHRRFKPDIKSYTILLEGWGQDQNLLRLNEVYREM 296
           DFNRLIDTLSKSR VE+AQEVFDKMK RRF+PDIKSYTILLEGWGQ+QN LRLNEVYREM
Sbjct: 206 DFNRLIDTLSKSRQVERAQEVFDKMKKRRFEPDIKSYTILLEGWGQEQNFLRLNEVYREM 265

Query: 297 RDDGFEPDVVTFGIIINAHCKAKKYDEAIRLFHEMKAKNVKPSPHVFCTLINGLGSEKRL 356
           +D+GF+PDVVT+ I+INAHCKAKKYDEAI LF EM+AKN+K +PH+FC LINGLGSEKRL
Sbjct: 266 KDEGFDPDVVTYAILINAHCKAKKYDEAIDLFREMEAKNIKATPHIFCILINGLGSEKRL 325

Query: 357 SEALEFFEQSKLSGFALEAPTYNAVVGAYCWSMKMADAYRMVADMRKFGVGPNSRTYDII 416
           SEALEFFE +K SGF  EAPTYNA+VG+YCWSM+M D +R+V +MRK G+GPN+RTYDII
Sbjct: 326 SEALEFFELNKASGFIPEAPTYNALVGSYCWSMRMQDTFRVVDEMRKCGIGPNARTYDII 385

Query: 417 LHHLIKNRRSKEAYSIFQKMSSDPGCEPTVSTYEIMVRMFCNEERVDMAIRIWDEMKAKG 476
           LHHL+K RR+++AYSIFQ+MS +PGCEPTVSTYEIMVRMFCNEERVDMA+++WD+MK +G
Sbjct: 386 LHHLVKARRTEQAYSIFQQMSREPGCEPTVSTYEIMVRMFCNEERVDMAMQVWDQMKTRG 445

Query: 477 VLPGMHMFSTLINSLCHENKLEDACKYFQEMLDVGIRPPAAMFSNLKQALIDEGRKDTAL 536
           VLPGMHMFSTLINSLCH NKL+DACKYFQEMLD GIRPPA +FSNLKQAL+D GRKD  +
Sbjct: 446 VLPGMHMFSTLINSLCHGNKLDDACKYFQEMLDAGIRPPAQLFSNLKQALLDGGRKDVVI 505

Query: 537 LLAEKIEKLRKAPLLG 551
            L  KI++LRK PL+G
Sbjct: 506 SLGLKIDRLRKTPLVG 521

BLAST of Lsi09G006500 vs. NCBI nr
Match: gi|657993866|ref|XP_008389228.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g71060, mitochondrial-like [Malus domestica])

HSP 1 Score: 723.4 bits (1866), Expect = 3.0e-205
Identity = 354/496 (71.37%), Postives = 427/496 (86.09%), Query Frame = 1

Query: 57  EHSTGLIPNRNDASHHFTNHGTEHSKQDSESNQNSTM-ESAEIAQDAEKLCKLIS-KNPN 116
           E+ +G + NR  + H   + G E  +   ++   + + ++ ++++DAEK+CK++S  + N
Sbjct: 26  ENPSGFLCNRTASFHRAIHDGLEKPQVLHDAGDKTPLLKNPKVSEDAEKICKILSTSSSN 85

Query: 117 SCIESLLDGASMEVSLALVVEVLKKLSNAGFLALSFFRWAEKQKGFKHTTESYNWLIESL 176
           S IES LDGAS+E S  LVVEVLKKLSNAG LALSFFRWAEKQKGFKHTTESYN LIE+L
Sbjct: 86  SPIESFLDGASVEASPTLVVEVLKKLSNAGVLALSFFRWAEKQKGFKHTTESYNALIEAL 145

Query: 177 GKIKQFNVIWNLVSDMKRKGILSRETFALISRRYARARKVKEAIDSFEKMEKFGFQLGVS 236
           GKIKQF ++W LV++MK KG+LS+ETFALISRRYAR +KVKEAID+FEKM KFG ++  S
Sbjct: 146 GKIKQFKMMWELVNEMKIKGMLSKETFALISRRYARVKKVKEAIDAFEKMAKFGMKVEGS 205

Query: 237 DFNRLIDTLSKSRNVEKAQEVFDKMKHRRFKPDIKSYTILLEGWGQDQNLLRLNEVYREM 296
           DFNRLIDTLSKSR VE+AQEVFDKMK RRF+PDIKSYTILLEGWGQ+QN LRLNEVYREM
Sbjct: 206 DFNRLIDTLSKSRQVERAQEVFDKMKKRRFEPDIKSYTILLEGWGQEQNFLRLNEVYREM 265

Query: 297 RDDGFEPDVVTFGIIINAHCKAKKYDEAIRLFHEMKAKNVKPSPHVFCTLINGLGSEKRL 356
           +D+GF+ DVVT+ I+INAHCKAKKYDEAI LF EM+AKN+K +PH+FC LINGLGSEKRL
Sbjct: 266 KDEGFDADVVTYAILINAHCKAKKYDEAIDLFREMEAKNIKATPHIFCILINGLGSEKRL 325

Query: 357 SEALEFFEQSKLSGFALEAPTYNAVVGAYCWSMKMADAYRMVADMRKFGVGPNSRTYDII 416
           SEALEFFE +K SGF  EAPTYNA+VG+YCWSM+M DA+R+V +MRK G+GPN+RTYDII
Sbjct: 326 SEALEFFELNKASGFKPEAPTYNALVGSYCWSMRMQDAFRVVDEMRKCGIGPNARTYDII 385

Query: 417 LHHLIKNRRSKEAYSIFQKMSSDPGCEPTVSTYEIMVRMFCNEERVDMAIRIWDEMKAKG 476
           LHHL+K RR+++AYSIFQ+MS DPGCEPTVSTYEIMVRMFCNEER+DMA+++WD+MK +G
Sbjct: 386 LHHLVKARRTEQAYSIFQQMSRDPGCEPTVSTYEIMVRMFCNEERMDMALQVWDQMKTRG 445

Query: 477 VLPGMHMFSTLINSLCHENKLEDACKYFQEMLDVGIRPPAAMFSNLKQALIDEGRKDTAL 536
           VLPGMHMF+TLINSLCH NKL+DACKYFQEMLD GIRPPA +FSNLKQ+L+D GRKD  +
Sbjct: 446 VLPGMHMFATLINSLCHGNKLDDACKYFQEMLDAGIRPPAQLFSNLKQSLLDGGRKDVVI 505

Query: 537 LLAEKIEKLRKAPLLG 551
            L  KI++LRK PL+G
Sbjct: 506 SLGLKIDRLRKTPLVG 521

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PP112_ARATH3.4e-19368.07Pentatricopeptide repeat-containing protein At1g71060, mitochondrial OS=Arabidop... [more]
PP129_ARATH9.3e-10640.31Pentatricopeptide repeat-containing protein At1g77360, mitochondrial OS=Arabidop... [more]
PP293_ARATH2.6e-6829.98Pentatricopeptide repeat-containing protein At3g62470, mitochondrial OS=Arabidop... [more]
PP294_ARATH5.9e-6829.98Pentatricopeptide repeat-containing protein At3g62540, mitochondrial OS=Arabidop... [more]
PP382_ARATH7.7e-6829.98Pentatricopeptide repeat-containing protein At5g14820, mitochondrial OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A0A0KUY5_CUCSA9.8e-26484.91Uncharacterized protein OS=Cucumis sativus GN=Csa_5G571490 PE=4 SV=1[more]
F6HFJ5_VITVI4.8e-20270.51Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g04690 PE=4 SV=... [more]
A0A061E7F9_THECC1.4e-20175.11Pentatricopeptide repeat-containing protein, putative isoform 1 OS=Theobroma cac... [more]
B9SYJ4_RICCO5.0e-19973.22Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCO... [more]
B9HW85_POPTR5.5e-19871.07Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s12490g PE=4 SV=2[more]
Match NameE-valueIdentityDescription
AT1G71060.11.9e-19468.07 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G77360.15.2e-10740.31 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT3G62470.11.5e-6929.98 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT3G62540.13.3e-6929.98 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT5G14820.14.3e-6929.98 Pentatricopeptide repeat (PPR) superfamily protein[more]
Match NameE-valueIdentityDescription
gi|659072880|ref|XP_008467144.1|9.8e-26585.64PREDICTED: pentatricopeptide repeat-containing protein At1g71060, mitochondrial ... [more]
gi|449465535|ref|XP_004150483.1|1.4e-26384.91PREDICTED: pentatricopeptide repeat-containing protein At1g71060, mitochondrial ... [more]
gi|645276551|ref|XP_008243338.1|1.4e-20770.33PREDICTED: pentatricopeptide repeat-containing protein At1g71060, mitochondrial ... [more]
gi|694330949|ref|XP_009356158.1|5.5e-20771.98PREDICTED: pentatricopeptide repeat-containing protein At1g71060, mitochondrial-... [more]
gi|657993866|ref|XP_008389228.1|3.0e-20571.37PREDICTED: pentatricopeptide repeat-containing protein At1g71060, mitochondrial-... [more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0009451 RNA modification
cellular_component GO:0005575 cellular_component
cellular_component GO:0043231 intracellular membrane-bounded organelle
molecular_function GO:0005515 protein binding
molecular_function GO:0004519 endonuclease activity
molecular_function GO:0003723 RNA binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi09G006500.1Lsi09G006500.1mRNA


Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 208..229
score: 0.069coord: 375..404
score: 0.
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 473..505
score: 1.
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 236..277
score: 1.5E-10coord: 301..348
score: 7.8E-16coord: 410..456
score: 1.0
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 340..369
score: 3.4E-4coord: 446..477
score: 4.6E-7coord: 270..303
score: 1.6E-4coord: 375..407
score: 0.0017coord: 236..268
score: 6.8E-6coord: 410..444
score: 5.5E-6coord: 304..337
score: 5.1E-10coord: 481..512
score: 5.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 443..477
score: 12.047coord: 513..547
score: 5.525coord: 267..301
score: 9.964coord: 337..371
score: 9.098coord: 197..231
score: 9.131coord: 232..266
score: 10.676coord: 163..193
score: 7.18coord: 407..442
score: 8.857coord: 302..336
score: 13.471coord: 372..406
score: 10.084coord: 478..512
score: 11
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 486..540
score: 2.4E-6coord: 213..383
score: 2.
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 4..30
score: 3.5E-298coord: 64..542
score: 3.5E
NoneNo IPR availablePANTHERPTHR24015:SF261SUBFAMILY NOT NAMEDcoord: 4..30
score: 3.5E-298coord: 64..542
score: 3.5E

The following gene(s) are paralogous to this gene:

None