Lsi09G005690 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi09G005690
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	NADH:ubiquinone oxidoreductase 17.2 kD subunit family protein, expressed
Location	chr09 : 6125005 .. 6137738 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTCAGTGGTGCGGGGGATTCTGAAGTCGATCAAGGACAAAGGGATCGGCACTTTCTGGAGAGAGCTCAAGGAAGAAGGCTACTTGTAATATTTTTCTCCCTACTTTCCGTTTTTGATCCATGGTTTATGTGAGGTCCCTGGGGAATTTGAGGGTTTTTTTTTTTTGGTAACTTGACTATTGTTTCCGCATTCGAATTCGTGCCCTTTATTTCTTTTATGCATAATTGATGTGATGTATCGGTGTTTATCTCGTCTGAAGATCGCTGTTTCAATGTTCAATGACTATGGGTGTTTCGTTCCTAATTCGAATGTTTCAGTCGCCGACAGCAAGGAAAAGAATGTAACCATTCGTTAATGCACTCTCTCTATGGTCTTAAGGTGACCTATTTGAGATCGTTTTCGAAGATTTGTATTTCGTGTAGATATGGAGTGCGCTAGGTTAACGGGAATTTGCAAGTAAACCTTTGAAGACTGGCATTCCTTTACTTTATTGTCTACTGATAAAATGTAGATTTTTATTTTTTATTTTTTTATTATTATTTTTAAAAATTTTCAAAATAGGTGCTCTTCACAACCGCTTGTCCAAGTTTTTTCTCTTTTTATCTAACTCCCTTTTTTCCTTTGCGAGTCTTGGGAATATCTCCATCAATAGACCCTACCTTCAATTTAGTTGCAAGAAAGAATTTGTAAATGTTTTTTGTTTTCAATTTTTGTTGGATCCCTCTCGCGCTAGTGAGTCAGTCTTTGATGTGCTCTGGAGGATTAGGATCCCTAAAAAAGTTTCATTCTTTACATGACAAGTCTGACTTGGCCATGTGAACATTTTGAATAGGCTTCTAAGAACGATGACTACGTTAATGGTTCCTTTTTGTTGTATTCTTTGTCGGAAGGCAAGGGTTGACCTCAATCACCTTCTCTGAAGTTGTTAGTTTGTGAGATCTGTGTGGAATTGTTTCTTTTAGGAATTTGATCTTGGGTTAGCTCGCTAGAGATGTTTGTGCGACGCTCGAGGAGTTCCTCCTCCATTCGCCTTTCAGAGAGAAGGGCCTCTTATTATGGTTTGCCAGGATGTGTGCTTTATTGTGAGATATTTTTTTTTTTGGAGGGGGGACAAGAGTGAGGGACCCTTCTTGTATATCTGGTCATGTACTGGTCATACTACCTCTAGTTCTTTGTTCTATTGTTTCTCAGTTTATAATTTAAGTATTAGTCTCATTTCATTAATTCAACGAAGAGGCTTGTTTCCATTTAAAAAAAAAAGACAAGAGTGAGGGACCCTTGTGATGTTTAGTCCTTGGTGAGGTTTCCATGTTTCTCTTTGAGCTCTGGTTTCAAAGACTTTTTTGTAATTATGCTCTAGGTAGAATCTTAGTTAGAAACCCTTTCTTTATAGGGGTTTTTGGTCAAGAGTGAGGGGACAAGAGGGAGGGACCCTTTTTGTATTTGGTCATGTACTAGTCATGCTACCTCTAGTTCTTTGTTCTATTGTTTCTCAGTTTGTAATTTAAGCATTAGTCTCATTTCATTAATTCAATGGAGAGACTTGTTTCCATTTAAAAAAATAAGACAATAGTGAGGGACCCTTGTGATGTTTGGTCTTGGTGAGGTTTCCATGTTTCTCTTTGAGCTTTGGTTTCATAGACTTTTTTGTAATTATTCTCTAGGTAGAATCTTAGTTAGAAACCCTTTCTTTAGAGGGGTTTTTGCGAGCTTGGTTGTTTTTTATGCTCGTGTTCCTTCATTTTTTTTCTCAATGAAAGCTGTTGTTTCTATAAAAAAAAATGATTGAAGTTTATTTTTAAAAGTTTATATACCTGTTACCATTTCAAAAAATGGAAAAAAGAAAAAAAGAGTCTAAATTTGGTTTGGGCGAAACCAAAGGATTTTCCATGACAAAAAACTGATGTGGATGGATCGGCTTGAGGTGGCTCGTTTATATACGTGTGTGAAATTGAACTTTTAGAAATGTTTATTCAAGCATGAAACATGTTTGGCTGTTTAAAGAGATCTTAAATGAAATTGTTTGATTTTTTTCTTACCTGGAAATGTTTGGTTAACAGATGATCAAATAATGGAATCGTGTTTATGACATGTGCTTGATGTCGATGTTCATATATATAGTTTGGTTTAGTGAGGATTTCAAACTAAAATTAGTGGGGAGTCAGGGACTGGGTAGAGTAGTGAAATTTGATGGAGGAGGGAGAGGGAACATAAAAATTCTTGGTTTGTGCATGTATTGCCGTTGTAAATAATTAGTTTTACTTTTTTGTTCATTTTGTAAATGGGATACTGTCTCTGTTTCATTCATTCACAATTGAACAGCTTCTTGGAGCTAAAAGTTTATGGCATTAGGGTTTCGTTATAAGTTTTCATTCTTGATACTGTCCGTTTCTCCACCAATATTAGAATCTGATTGTGTTAACTGTCTTATTTTGAATCTTGCAGGAAATGCCTACCCGACGGAAACCTATTGTAAGTTAAATTTTCCATGCAATATTAAGCTTTCCTATAAAATGGTTTGTTACTAACAAACCCCCTCTCTCCTCGGAACACGCATGTATATGTAAAAAATTCATTGTTGCTTTCCTTTACAATTTGTTTATGTTTGCATGAAGCTTTGGATTATCCTTGGTTGGCAACGGAGAACCATGGATTATGCATACCGCATACTACACCAACATTTGTCCGTAGACAGCATAGACTGTTTCAACCATAATTTCTTGCTATAAGCTTGTGTCAAAGAATGCCATCTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTGGTTTTATTTAAGAAACAAATTTCATTTCATGTGTGAAAATTTACAAAAGAAGGGCTCATGCTCAAACCGAAGGAGTTACAAAAGATTTTTCCAATTGGCCAAACGAGAGGTGAGAAAATAAGATCTATAAAAAGTAGTGCATCTACACCAAGTCATAGCAAGGAAAATAATATATTCAAAGTAACGATTAAAAGAGTCTTCCTTATCTTGAAAAAGACCACGAATGAGAATCGTCTGAAGGATTCTTTTCCCTTCTGTGTAGGGTGGCCATTGAGGGTGTAGTTGAGAAGACTGATGATATTGATATCAATAGGAAGAATAAGGTGCCAATTTGATGCAGCAATCCGTTCTTTCCAACAACTACTAGCAAAATGATAGCTGATAACAAGTGATTTTGAGTCTCTTGGACAGCTTTACAGATAATACATCAATGAGGAGATAGAGACATGTACAGGGCACGACGCTGCATTTTGTCTTGGGTTTTGATAACATTGTGGCTAAGCTCCCATAGGAAGAATTTGACTTTCTTGGGGAAAATTCGGTCCAAATTTCTGCCCTAAGGCAAGCCAAAAGGGACTTTGTAGAAAAATAGCCTTCTTTAGTCAACCTCCAAGACCATTAATTTTTTTGATGAGTCAAGTGACTAGTGTCCACAAGATTCATGATATTAAGCCAATCTTTCAATTCCTCATCATAGAGTTGCCTCCTCAAAATCAAATTCCATCCGTCATGATCATCATAATGTCCTGGATGGTGAAATTTTTTTGAGCAGCTAGAGCTTCATCTTTCAGCCTTCTGTCATGCCAAAAAAAAGCATTAAAACCATTTTCCACCTTTATGTTTACCTGATCCTTAACAAGGTAAAGGTGTAAAAGGATGGGTCTTCAAGGTCCTCTTGTGTATTCAGGGAACGTGTTCGTTTTGCAAGGAGACCCATATTTTTTAGGTTAGTAATTTGAAGACCACCCTTTCCAATCAGTAAACCGATCCCTTTCTCATTTAGTGGGCAACTTCCTCCACTATGATCAGCCCCTCTTTAGAAAATATATAAGACCATAGTAGGGGAGGCCTATGGTATTTTGTGGGCATTGTGGGGCGAGAGAAATAATAGAATCTTCAGTGGATGGGAGAGGTCTTCCAGCGATGTTTGGTCCCTTATTAGATTCTTTGTTTCTCATCTATCCCTATTTCTTGTTCTCCTTCTCATTACTTTACAATAAGGGATAACTTATTTGATGGAAAATACAAATTGTAAGGTACTATTGTCAATTATACATGCTGAGACAGGGAGATGGATATGGTTGAGAGAGTCGGTCTTAAAATTAATATCTAATATTATTTATATTAATGTAAATATTCATAAATGTTATATTTAGGCCTTGAGAGATGTCCATTTTCTCCACGAGGCCGGGGCCCGTGGGTACTCGCCCCGCTCAGGGCGGGGAATCCCTGATTACACGGGGAATGGGGGAGGGAGCGGAGTGAATTTTCTCCCTGTTGGCCAAACAGGGACGAGGATGGGGAATGTATTCCCCGGCCCCGACTCCCTGCCCCGCCATATATATATACACTTTTAGAAAATTATAGTTTTTACCAATTAGCTTTTTCCTAATTCTCATCATAATTTTTTTATACTTTAATATATTTCTAAAATAGAGATGTTGAATGTTTCTTACTTTTAAGACTTGTAATGTTTAAGTTGAAATTAGTGATTAATATTTGAACTTTTAGAAATAAGGAGATAAAATATTTTAATTATATCTTTACACATAATATATTGTTATTTTTGTAAAATTTTTTATAGTGTTTTATTTAAATAGAAATGTATCGGAATGACATATTTAATATAGAAAATTTTAAAAATTTTATATCGTTTGGGAATAAATTAAAAAAAAAACTTGTTAATAAATAAATAAATTAAGAAAAAAATTAACGGAGAATTTTTCTCTGTGGGGAATCGAAATAGGGGGCGGGGATGCTTCCCTGTCCCCGCTCCGCCCCGTGGACATCTCTACCTTGAGGTACTAAAAACTGCGTTACCAATTCACTAAACAATGTACTGTAGTTTTTCCTCGATTCAAATGTTCTGTACAATTATGTTATGATTTTGATTTTCATGACACTTCTTGAATTTTCCATCAACAATACATCTATGGAGCCGTTATTTTGCTTTTCACTTGACGTGAACAATTTTTTTTGTCCCTCATTCATACACTGAATAATTTCCTTTCCATGCAAATTATGCATTTTATTTGATTTAGAGGAGTAATCTTTATCATCTCTAATCTGTTCATTTTTCTTTTCAGGCAAACAAAAATCCACAACATTGGTGCGACACTTGTGGGTGTTGATAAGTTTGGTAATAAATATTACCAGAAGGTTGATGAAGAGACTCAATATGGTATTTTTTTTCCTGTCTAATTGGTTTTTGTTTGAGTTTCACGATGTTACTACCTATTTGCTATGGGTCAAGGTCGAGATGTGTAAACCACAATGCTTAAGAAACTTACCATGTTATGTTTATATTTGCTTCTGGTAGATTAAGTTGCTTGAATGCTTAAACGACAAATATTTTATATTTAGAGAGAATGTTTAGGGCATGTTTGGGTGCTGAGTTGGTTATTATTGTTAGGAGTTATTGTAGTTTGTGGGTTATAATAGTCTGGGTTTAGGGTGTAGTTTGGGTAGGAAATAGTAAACACTATAACAAAGGGGAAAGAGGATGAGTAGGAAATAGTAAACATTGTAACAGAGAAGGATTTGAAATAGTAATATTGTAGTTAATTGTAGGTTATAATAGTTGGAAACACCAGCATTATAATTAGAGCCCCAAACATGGAATGAGCCGTTCCACTCATTTGAAGTTGGGGGCCCAAACACTTCCTTAATTGTTTAAAGATACTCTTTCCTTTTAGAAACTTCGCCATTTATTTAATATAGTAAATGATCGATTGATTATATTTCTTGATACAAAGTGATGCAGTAGTTCTTCATTTCCTTGTATTACTTATTCTAATACTTTTTTTTCTGTTCAAAACTGCTCAATTCCCTAATCATATCCAGCTGATAGGAAACTTGAAAAAGGCTTGCTGGATCAAAAAATCTTTACCTCCAAAATTGAAAGGGGAAGAAAAGGAATTTCGTACTTATATAGAATGGAACATTTTTATGCTTGTTCCGTGTTCACTGTTCTCTAACATTCCCTTTTTATGTTTTGGGGAAAGCTGAGCTAGTAAATTTTACATTTCTGTAGGTAGGCACAGGTGGGTTGAATATGCAGAGAAGGGTCGATATAATGCTTCTCAGGTGCCACCCGAATGGCATGGCTGGCTCCACCACATAACTGATCATACAGGAGACGAGGTAATTCCCCTGCACGTAAAATTCTCAACTAGGTTTTGCAAAATTTTGTTAACCAAAAGTTGATATATTATTAATTTATTATTTTATTTGCCACATGTGTCCAAATATACTTATAAAACAGTAACTCTACTGACACATAAGCTTTCTGTTAACACATTTTAGCTAATTTTTATATGAAGAAACCTAATTGAGACTTCTCTTCGTACATTGAGGTTAAAATTGAAAATTTGGAAGATTAAGGACGGAATTGAGTGTGTCTAAACAATTATAGACCCTTTGGTATATTTAGCCTAATAATAAAATAAAGGAAAAATATCAATTTATATCCTTAAACTTTAAGCGTTATATCAATTTAAACTATGAACTAATAATTGTACCAGTTTAAATCCTGAACTTTTGTAAGTGTATCAATTTACACCATCCGTTGTGTTAATGATAAACTTTCACCTCGCCACATAGTAAGCAATATGAAAATGTTTTGCAGCTTCTGATGCTGAAGCCCAGTAGGTATGGAATAGAACACAAGGAAAACTTCTCTGGGGAAGGTGAAGAACTTATCTACCATTCCAAGGGACATGCTCTTAATCCTGGACAGAGAGATTGGACTCGATACCAGTCATGGCAACCAACCAAGTCATAAGTGATTTGTCTATCAAATAATCCCATTGTTCAATTTGGAAATCGTTGGGATATTTGGTTGTCATCTTTCCTTTCTTCTGAATAAGTGACTTGTTATCTATGCAAGTTGTGAATTATTTTTCATTATGTTTTACTTCACAACACATGAGGAATTTTCAGCATGTTTTACTTATTTTTCAAATATTAACAAATTCATTGTTGTTCATGTGCTATCTCTCCTGTCAAACTCTGTTCTTTTGTGCGCCATATCTTAGCTTCCCTTTGATATAAAGATATATACACACATTTCATTCTTGGTTTATTTTAGTTTCTATATCCTCAAAATGTTCGTTTTGATCATATATACACACATTTCATTCTTGGTTTATTTTAGTTTCTATATCCTCAAAATGTTCGTTTTGATCATTGTATTTTTTACTTTTGTTCATTCAATCTATGTACTTCAAAGAAAGCTTTTTGGTCTTTGTACTTCCAGAAAGTGATTAATTTAATTTCTATTTACAGAATTCTAACTCAAATTCTACAGGGAACCTTCTAATAGCAATGTTTAGACTACATCTCAAGAAATCTTATTCAATGTTGAGTTATAAATGGACTACTTTAATTATGCATGAAAACTATCTTTTTTATGGGATTTTGACAATAATTAATAAGAATAACTCTAGCAAATAGTTGTTAAATCAACTTCAAGAAAAAGAAAAATCAATGATCAATAAAGGGGAATTTTTTCCTGTTTTCTATTTCAAAGCTTTACAATCAAATTGATCAAATGCGATTTGAAGTATTAGATGTATTTTAAATACAAGAATATAAAGAAAGTACAAAATTTAAGAGAGATTGAGCTTATATAAAATTTAGGATAATCCAACTATTTTTCTATATAACAAAAAAACATTTGAATTCATAATAATTGGAAAGACACGACTCTTGGTCATTTGGGTATTAAAGTTATTCTCCCCTTAAATCCTTACATGATCCTTCTTAAATGTACATGGTACGTAATTTATAAGGCATGAATGGATATGAACTTGAAGATCCATCAAGCTTCTTAGAAGAATGGATGTCTTATTAAGCTTGAATAGCTCATGGTTTGGTTGAATTTGACTTGATCCATTGACTTTGAGCAATGAGCTTTATTGGGAGATAATTGTATAGATGCCCCAAAAGAAGTCTAAATATTCTTTTCAAACTTAAGAATTTTGCCATTTTGCTTACATCATTATTAGTCAACATTATCAAAATACCCTTATTTTTGTTTGCTTTCTTCCTCTTCTCGATTTTGTTTTTTCTATACTTCTTTTTTTCAATTGTTGTTGCAGAGGGGGTGGACCGACCGTACTTTCATCGGAGAGGTTGTGGGCTCGACAGAAAGGGATTAGAGAGATAGTTGGAGCATCGGATGTGTAGGTTATCGTCGAAACATGAGTTTATTTGCAGGGGGGTTGCTTGATTTTTTCGCTTGCCAAATCTGTGGTTTTTTGCCAGAAAGTGGTGTCGGAGCGAGAGCAAGGGACATGATTTGGGGCATCGAATATGTGGGTTCTCGCTAGAAAGGGGCGAGAGAGTGAGAGCGATAGGAGATTGAGAGAGAGAGGAGGTCGAGAATGAGAGGCCCAATGTGTGTGTGTGATGTACATTTCGATAAATTTCATAAAGATATGACACAAGCAAAAGGACAAAAATCTTAAAGTTTAGAAAGCAGTTCAAATCTCATTTCAACCCAATACTTTGAATTATTCATACGATTTACTGTTTTTGGATTCACGGGATAAATATTAGTCTTTTTATCTTTCAATTATTTCCCAATATCTTTTCCTTCTATAGGTAGGTTCCATACTCGAAATTTGTTTTTTATATTCACCTATTATTCGATTCTTGGTTTCATAAGAAAATTAAATTCTCCAAAAACATCAAAGTTAGAGTGAAATCCATCTTGCGGTTCAATCGAAATCCAACTTATGCTTCAGTCTGATTTTCTCAATTTTGTAGTTGATTTAGAAGTGAAATGTTACTCAAACCAATTTCACTCACTGCTCATAGCAAAATAAAAGTCTTTCTTTTTCTCAACCATAAGGTCTAATGCTCTGTATGGATAATCATTGACAACTGTGACCATTTAGATCTTGCACTTCCCTATAAACAACTTAAATTTATAGTTGAAAAGAATGTTGAACAACACTTATCATTCCACAACTTTGATCTAGACTTGGTCCTTGGCCTTAGTTTTTTTCTTTTTATTTTTTAAAATATCAATGGAAGCAACAGGCCATAATGAAAATAAAACAAACTACAGCTGACAATTGTTAAAGGTTTCAAAGCTTCACTCACTATATAGAAGTTTCTCGACCAAAATTCAATGCAGGAAGATTCTGTACTTGTATTCCTTTGAATATTCAATGACATTAAAGGTTCCTTGTGAAAAGATGGAAAAAAAACATGCCTCTACTCAAACTTCTCAAAGATATTGTAGCAGCAAGTATGCTAGATACAGCGGTTTATATCGATTTCGTACTAGGATATTTCTTTTTCTATGGTTATTTTGAACTTGTGAACCTCTGAAGTAGTGGATGCAGTCAAATGGCAAAGGAAATTCACTCAAATGCCAGCCTTTGTGTGCTGACTAATGAAGCATACCGACCTTTCTGAGCCAGTAGTTCCAAATGAGTTCCCAACTCTACAATTTTTCCATCGGAACAAAATGCAATTTGATGAGCATTTTGAACCGTACTTAATCGATGTGCGATCACTAATGTTGTCCTTCCCTTCATTAGTTGATTTAGAGCATCCTGGACCAGTCGCTCACTAACTGCATCTAGTGCACTGGTCGCCTACCAAAAAAAAAAAAAGACAGCATCATAATCCGTGACAGGATGACCCTGCTGAATTCCTGGTTCAAGTAGGCGACACAAGAGATCTCTTCTCTAGTTGCACAGGGCAGGAAGAATGCAGATGACATAGGCGACGAGATCAATACAAACTTACCTCATCCAGTATAAGGATTGGAGCATTCTTAAGCAAAGCTCTCGCAATTGCAATTCTCTACAAATGGTAAGTTAAATGTCAGTTTCTCTCTATCTCTCTCTCTCTTCCCAAACAAACACAAATTTATTGTGATGTCTTTGTTACAATACCTGTCGCTGGCCACCGCTAAGAAGGCCTCCGCGTTCACCAACTGGTGTGTCATAGCCCTTCCAGAATAAGACTATGTTAATGGCAACAAAGGAACCGGCAGAACAAAATATGAACATTCTAGAAGATAGCAAACCTGAGGAAGTGAAATAATGAAGTCATGAGCGTTTGCAGCTTTGGCTGCCTTTATAACTTCATCCTTTGTTACATTATCATCTGGAAGTCCATATGCAATATTCTCTCCGACAGACACCGAAAAAAGAACGGGTTCCTGAATCATCATCTTATTAGTTTTTCTTCCTCTCTTTTCTCCCTTTCCTCTCCTTTTACTTGCAAGAAAAATAATGTAATACTAGGACAATCTTTATGTATGTCAATTATAATATCAATGTTCAATGTTCAATCTTTAGCCTCAAGGTAAGTAGTATGGTAATGTTCGATGTGAGTTTGATATTACTTGATTCACTATTGAGACAGCCCGAGCCCATTCTCTCTTGTCAAATGCTCGAATATCTTCACCAGAAACTTTTATCTGCCCTGTCTTTGGCTGTAAAATAAGCATATCAATATCATTAATCAATCCGTAAATTACTGAAGTATGTTGATATAAAAGGGAAGTTTTACCTCATAAAAACGTGCCAATAGCTGCACTATTGTACTCTTTCCTGCTCCACTAGGGCCCACTAGTGCCGTTATGGTTCCACATTTAAGGGTTAAATTCAAACTAGTAAGAACGTTAACGTCCGGTCTCAAAGGATAAGAAAAGCACACATCTGCAAGACAAGAAATGAGCACAACATATATTGACACATTAATTCATTTCTCAAAATGCTAGTGAACATAGCTCAACTGGAATACAGTAATTGTTAGCGATCAAGAGATTTGTAATTCAAATCCCCTCCTATCATACTAAAAAAAGAATTCATTTCTCAAAATAATTGACGTATAGAAAACAAGTTTCTAATTTCAAAGTGAGCACAACCAAGAATAACTCATTATACTAGTATATATTTCCTTGGAAATGGAGAAGGCATAGAAATGGGATTTAGAAAGAGATTGTTTATTATAGTCTGTGACTGTGAGTGTTTAAATGGAAATGGTACCTATGCACATCTCAACTAATCTCAAGGACAATCTTACATTTTTTAGTTATCAAAGAAATTTAGCATAAAAAAACGATGAATTAAACATAGCTTTGAAAAAATTCACCACTTGACTTAGCAAAGTTGAATTACTTATTAGTTATTACAAATGTCACTGCATAAATATAGGAAGCACTTGATGAAAAAAAAAAAATCAAACGTAAATAGACCAACACTCTGTTTCTACCATTTTATTTATTTGATTGCAAAAGCATGAGAAATATTTTAAGACTTTTCACAGCGAATATTGGGAACTGCAAGATATTTACCTTCAAGACAAATATCACCAGACCAAGCAAGATTGATAATGTTGCTGGAAGATTTTAG

mRNA sequence

ATGGCGAAATGCCTACCCGACGGAAACCTATTGCAAACAAAAATCCACAACATTGGTGCGACACTTGTGGGTGTTGATAAGTTTGGTAATAAATATTACCAGAAGGTTGATGAAGAGACTCAATATGCGAATATTGGGAACTGCAAGATATTTACCTTCAAGACAAATATCACCAGACCAAGCAAGATTGATAATGTTGCTGGAAGATTTTAG

Coding sequence (CDS)

ATGGCGAAATGCCTACCCGACGGAAACCTATTGCAAACAAAAATCCACAACATTGGTGCGACACTTGTGGGTGTTGATAAGTTTGGTAATAAATATTACCAGAAGGTTGATGAAGAGACTCAATATGCGAATATTGGGAACTGCAAGATATTTACCTTCAAGACAAATATCACCAGACCAAGCAAGATTGATAATGTTGCTGGAAGATTTTAG

Protein sequence

MAKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKVDEETQYANIGNCKIFTFKTNITRPSKIDNVAGRF

Homology

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BLAST of Lsi09G005690 vs. Swiss-Prot
Match: NDUAC_ARATH (Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Arabidopsis thaliana GN=At3g03100 PE=1 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 1.2e-13
Identity = 35/40 (87.50%), Postives = 38/40 (95.00%), Query Frame = 1


Query: 3  KCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKVDEETQY 43
          +CLPDGNLLQTKIHNIGATLVGVDKFGNKYYQK+  +TQY
Sbjct: 32 RCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLG-DTQY 70

[Close]

BLAST of Lsi09G005690 vs. TrEMBL
Match: A0A0A0KNC9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G172840 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 1.9e-15
Identity = 40/40 (100.00%), Postives = 40/40 (100.00%), Query Frame = 1


Query: 3  KCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKVDEETQY 43
          KCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKVDEETQY
Sbjct: 31 KCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKVDEETQY 70

[Close]

BLAST of Lsi09G005690 vs. TrEMBL
Match: D7L0D5_ARALL (NADH:ubiquinone oxidoreductase family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_896303 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 1.3e-11
Identity = 35/40 (87.50%), Postives = 38/40 (95.00%), Query Frame = 1


Query: 3  KCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKVDEETQY 43
          +CLPDGNLLQTKIHNIGATLVGVDKFGNKYYQK+  +TQY
Sbjct: 32 RCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLG-DTQY 70

[Close]

BLAST of Lsi09G005690 vs. TrEMBL
Match: F4IZR4_ARATH (Putative NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Arabidopsis thaliana GN=At3g03100 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 1.3e-11
Identity = 35/40 (87.50%), Postives = 38/40 (95.00%), Query Frame = 1


Query: 3  KCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKVDEETQY 43
          +CLPDGNLLQTKIHNIGATLVGVDKFGNKYYQK+  +TQY
Sbjct: 32 RCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLG-DTQY 70

[Close]

BLAST of Lsi09G005690 vs. TrEMBL
Match: V7CFW7_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G039500g PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 1.3e-11
Identity = 35/40 (87.50%), Postives = 38/40 (95.00%), Query Frame = 1


Query: 3  KCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKVDEETQY 43
          +CLPDGNLLQTKIHNIGATLVGVDKFGNKYY+K+  ETQY
Sbjct: 31 RCLPDGNLLQTKIHNIGATLVGVDKFGNKYYEKLG-ETQY 69

[Close]

BLAST of Lsi09G005690 vs. TrEMBL
Match: V4LGY6_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10021682mg PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 1.3e-11
Identity = 35/40 (87.50%), Postives = 38/40 (95.00%), Query Frame = 1


Query: 3  KCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKVDEETQY 43
          +CLPDGNLLQTKIHNIGATLVGVDKFGNKYYQK+  +TQY
Sbjct: 32 RCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLG-DTQY 70

[Close]

BLAST of Lsi09G005690 vs. TAIR10
Match: AT3G03100.1 (AT3G03100.1 NADH:ubiquinone oxidoreductase, 17.2kDa subunit)

HSP 1 Score: 76.6 bits (187), Expect = 6.6e-15
Identity = 35/40 (87.50%), Postives = 38/40 (95.00%), Query Frame = 1


Query: 3  KCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKVDEETQY 43
          +CLPDGNLLQTKIHNIGATLVGVDKFGNKYYQK+  +TQY
Sbjct: 32 RCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLG-DTQY 70

[Close]

BLAST of Lsi09G005690 vs. NCBI nr
Match: gi|778700574|ref|XP_004143640.2| (PREDICTED: probable NADH dehydrogenase [ubiquinone])

HSP 1 Score: 89.4 bits (220), Expect = 2.8e-15
Identity = 40/40 (100.00%), Postives = 40/40 (100.00%), Query Frame = 1


Query: 3  KCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKVDEETQY 43
          KCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKVDEETQY
Sbjct: 31 KCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKVDEETQY 70

[Close]

BLAST of Lsi09G005690 vs. NCBI nr
Match: gi|659073080|ref|XP_008467243.1| (PREDICTED: probable NADH dehydrogenase [ubiquinone])

HSP 1 Score: 85.1 bits (209), Expect = 5.3e-14
Identity = 38/40 (95.00%), Postives = 39/40 (97.50%), Query Frame = 1


Query: 3  KCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKVDEETQY 43
          KCL DGNLLQTKIHNIGATLVGVDKFGNKYYQ+VDEETQY
Sbjct: 31 KCLADGNLLQTKIHNIGATLVGVDKFGNKYYQRVDEETQY 70

[Close]

BLAST of Lsi09G005690 vs. NCBI nr
Match: gi|1012129913|ref|XP_015964693.1| (PREDICTED: probable NADH dehydrogenase [ubiquinone])

HSP 1 Score: 77.8 bits (190), Expect = 8.4e-12
Identity = 35/40 (87.50%), Postives = 39/40 (97.50%), Query Frame = 1


Query: 3  KCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKVDEETQY 43
          +CLPDGNLLQTKIHNIGATLVGVDKFGNKYY+K+ E+TQY
Sbjct: 32 RCLPDGNLLQTKIHNIGATLVGVDKFGNKYYEKL-EDTQY 70

[Close]

BLAST of Lsi09G005690 vs. NCBI nr
Match: gi|1021517486|ref|XP_016202250.1| (PREDICTED: probable NADH dehydrogenase [ubiquinone])

HSP 1 Score: 77.8 bits (190), Expect = 8.4e-12
Identity = 35/40 (87.50%), Postives = 39/40 (97.50%), Query Frame = 1


Query: 3  KCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKVDEETQY 43
          +CLPDGNLLQTKIHNIGATLVGVDKFGNKYY+K+ E+TQY
Sbjct: 32 RCLPDGNLLQTKIHNIGATLVGVDKFGNKYYEKL-EDTQY 70

[Close]

BLAST of Lsi09G005690 vs. NCBI nr
Match: gi|1021508848|ref|XP_016197776.1| (PREDICTED: probable NADH dehydrogenase [ubiquinone])

HSP 1 Score: 77.0 bits (188), Expect = 1.4e-11
Identity = 35/40 (87.50%), Postives = 38/40 (95.00%), Query Frame = 1


Query: 3  KCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKVDEETQY 43
          +CLPDGNLLQTKIHNIGATLVGVDKFGNKYY+K+ E TQY
Sbjct: 32 RCLPDGNLLQTKIHNIGATLVGVDKFGNKYYEKL-ENTQY 70

The following BLAST results are available for this feature:

BLAST of Lsi09G005690 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NDUAC_ARATH	1.2e-13	87.50	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Arabid...	[more]

BLAST of Lsi09G005690 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KNC9_CUCSA	1.9e-15	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G172840 PE=4 SV=1	[more]
D7L0D5_ARALL	1.3e-11	87.50	NADH:ubiquinone oxidoreductase family protein OS=Arabidopsis lyrata subsp. lyrat...	[more]
F4IZR4_ARATH	1.3e-11	87.50	Putative NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Arabid...	[more]
V7CFW7_PHAVU	1.3e-11	87.50	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G039500g PE=4 SV=1	[more]
V4LGY6_EUTSA	1.3e-11	87.50	Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10021682mg PE=4 SV=1	[more]

BLAST of Lsi09G005690 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G03100.1	6.6e-15	87.50	NADH:ubiquinone oxidoreductase, 17.2kDa subunit	[more]

BLAST of Lsi09G005690 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778700574\|ref\|XP_004143640.2\|	2.8e-15	100.00	PREDICTED: probable NADH dehydrogenase [ubiquinone]	[more]
gi\|659073080\|ref\|XP_008467243.1\|	5.3e-14	95.00	PREDICTED: probable NADH dehydrogenase [ubiquinone]	[more]
gi\|1012129913\|ref\|XP_015964693.1\|	8.4e-12	87.50	PREDICTED: probable NADH dehydrogenase [ubiquinone]	[more]
gi\|1021517486\|ref\|XP_016202250.1\|	8.4e-12	87.50	PREDICTED: probable NADH dehydrogenase [ubiquinone]	[more]
gi\|1021508848\|ref\|XP_016197776.1\|	1.4e-11	87.50	PREDICTED: probable NADH dehydrogenase [ubiquinone]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **Molecular Function**
Term	Definition
GO:0009055	electron carrier activity
GO:0008137	NADH dehydrogenase (ubiquinone) activity

Vocabulary: **INTERPRO**
Term	Definition
IPR007763	NDUFA12

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006120	mitochondrial electron transport, NADH to ubiquinone
biological_process	GO:0015992	proton transport
biological_process	GO:0009735	response to cytokinin
biological_process	GO:0006814	sodium ion transport
biological_process	GO:0006744	ubiquinone biosynthetic process
biological_process	GO:0009853	photorespiration
biological_process	GO:0080129	proteasome core complex assembly
biological_process	GO:0051788	response to misfolded protein
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0005747	mitochondrial respiratory chain complex I
cellular_component	GO:0016020	membrane
molecular_function	GO:0050897	cobalt ion binding
molecular_function	GO:0009055	electron carrier activity
molecular_function	GO:0008137	NADH dehydrogenase (ubiquinone) activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi09G005690.1	Lsi09G005690.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007763	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12	PFAM	PF05071	NDUFA12	coord: 21..64 score: 1.

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi09G005690	Csa5G172840	Cucumber (Chinese Long) v2	culsiB322
Lsi09G005690	CSPI05G08250	Wild cucumber (PI 183967)	cpilsiB322
Lsi09G005690	Cucsa.115450	Cucumber (Gy14) v1	cgylsiB162
Lsi09G005690	CmaCh02G010280	Cucurbita maxima (Rimu)	cmalsiB531
Lsi09G005690	CmaCh15G013980	Cucurbita maxima (Rimu)	cmalsiB261
Lsi09G005690	CmoCh02G010440	Cucurbita moschata (Rifu)	cmolsiB517
Lsi09G005690	CmoCh15G014650	Cucurbita moschata (Rifu)	cmolsiB248
Lsi09G005690	Cla002352	Watermelon (97103) v1	lsiwmB030
Lsi09G005690	MELO3C005389	Melon (DHL92) v3.5.1	lsimeB013
Lsi09G005690	ClCG01G005390	Watermelon (Charleston Gray)	lsiwcgB008
Lsi09G005690	MELO3C005389.2	Melon (DHL92) v3.6.1	lsimedB013
Lsi09G005690	Cla97C01G005610	Watermelon (97103) v2	lsiwmbB007
Lsi09G005690	Bhi12G000649	Wax gourd	lsiwgoB016
Lsi09G005690	Cp4.1LG13g00560	Cucurbita pepo (Zucchini)	cpelsiB133
Lsi09G005690	Cp4.1LG05g06900	Cucurbita pepo (Zucchini)	cpelsiB583
Lsi09G005690	Carg08448	Silver-seed gourd	carlsiB648
Lsi09G005690	CsaV3_5G005640	Cucumber (Chinese Long) v3	cuclsiB345

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi09G005690	Cucumber (Gy14) v2	cgyblsiB294
Lsi09G005690	Silver-seed gourd	carlsiB676