CmoCh15G014650 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh15G014650
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Nadh dehydrogenase ubiquinone 1 alpha subcomplex subunit 12
Location	Cmo_Chr15 : 9944622 .. 9948218 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTATTAGACCATCTTACCCTCATCGTCCTGGAGGCAGCTGCTTGGACTGAAGAAGATCAGCAATCGAGAGTCGGAAGCGCAAGAACACCGAGAAGAGAAATGGCTTCGGTGGTGCGGGGGATTCTGAAGTCGATCAAAGACAAAGGCCTCGGTACTTTCTTGAGAGACCTCAAGGAAGAAGGCTACTTGTAATGTTTTCCTTTCCTATTTTTCGTTTTTGATCCATGGTTTCTGTCAAGTCCTTGGGGAATTTGGTGGTGTCGTCGAATTCGAATTGGAATTCGCGCCTTTTAGTTATTTTTTGCTTAATTTGTGTGATGTATTGGTGTTTCTCTTATTGTTCTGAAGATCGCTGTTTCAATGTTTAATCACTACGGGTGTTTCTTCCCCAATTTGAATGTTCGATGCCTATGGATATTGTCTCTGTTTCCCCAGCAATGTTGGAATTTGGATTGTGTTAACTGTTCTTTCTTGATTGAATCTTGCAGGAAATGCTTACCCGATGGAAACTTATTGTAAGTTCAATTTTCTATACAGTATAGAGCTTTCCTATAAAATGATTAAACTATCACCCCCTATAAGAGAACATAAAAATCATCGTTGCCTTCCTTTACATATTGTTTGTGCTTCCATGGAGGTCTGCAGTATCCTTGGTTTCGCAATGGAGAATCATGGGTTGTGCGTACTTCTCCACCAATGCTTGTCCACAGGCAACCTGGATCTTCCCAACCATAATTTCTATTGAGAATTGTTGGGAGGGGAGTCCCACATCGGCTAATTAAGGGTTAATCATGGGTTTATAAGTAAGGAATACATCTCCATTGGGATGAGGCCTTTTGGAGAAACCAAAAGTCAAACCATGATAGCTTAGGCTTAAAGTGGACAATATCATATCATTGTAGAGATCTGTGATTCCTAACATAAATAACACCTTTAAGGGTTATAAAACACAAGAATTCAGTGATGGATAGCTATCTCAGGGTCCGTCCGCCATGCTTGATAGCTCATGGTAGTGGTAGAACAATCCATCATCTGAATCCATGACGGCCCTCCATCTTTAGGACAGAAAATATTTTAGTGCATTTGAAAGACTGCTTGGAAGAGCATCAATCTTCATTTAGGACAGAAGAGGAGCTTTTCCACTCACTGAATTATGTTGGATTTCTTTTCAATAATTAGGTCCGAGAAGCCCCTACATCTTGGATTTCAACTATTTTAAAGGTCAAGTTGATGCCTTACAACTCCATTTTCTCTGTCAATAGTATCAGTTCAATAGAAATTTCTGTACTAGCTGTTTGACACTTAACTGAATTAACCGAGAAGATAGAGGCACATTAAAATATCATGATGATATTCCACGAATTAACCAATTTAACTTTGTCACAAACATGCTATATATGAGTATTATATGTGACGTTGAGGTGGTAAACTTGAAAATTGTTCCTACTCTTCCTCTCTTTCGTTCAGGTTTTGTCGTCCATTGTTCGATAGGGAAACGGTAGAGGTGTTATGACTCTCCTTTCTTTATTGGGAGATCCCGAGCTTAGACAAGGGAGAAGGGATTTTCTTACTTGGTGTCCACCTTTGGTAGGGCTATTCTGTTGCATCATTTGTCGGAGGGCGGAGGAAGATCTGAACCATTTAGTTCGGAGTTATGACTATGCTCATTCGGTTTGTTATTACTTCTTTGGAGTGTTGGTTTGATATCCCACGTTTGTTGGGGAGGAGAATGAAGCACCCTTTATAAGGGTGTGGAAACCTTTCCCTAGCAGACGCGTTTTAAAACCTTGAAAGGGAAAGCCCAAAGAGGACAATATCTGTTAGTGGTAGGCTTGGGCCGTTACAGTTTGGCCTTTAGATAGCCCGATACAGAGCTTTTTGTGATACGATCGAGGAATTCCTCCTCCATCCTTCGTTTAGGGGAAAAGAGAGTTACAGGGAAAGTTGGAATGCATGAAAGTTAGTCTTTTATAGAGAAATATATATCCATGTAGCTGTTATTTTGCTTTCCAATTGACGTCAACAATTCTTTTTTATCTCATTCATACACTGAATAATTTCCTTTCCTTGCAAACTATTCAATGTGGTTTATGGGAGCTATCTTTATCATCTCTAATTTTGTTTTATTCAGGCAAACCAAAATTCACAACATCGGTGCGACACTTGTGGGTGTCGATAAGTTTGGAAATAAATATTACCAGAAGCTCGATGAACAAACTCAATATGGTATTTTTCTTTCTATTTGCTATCGGTGAAGGCCAAGATGTCTAAACCATTGCTTAAGACACTTGCCATGTTATGTTAACTCGAACCGATTGATTATGTTTCTTGCTACAGAGTCATGCAGTAGTTGTACGTCGCCTTGTATTACATATTCTTCTAGTTTTTCTGTTGAAAACTGCTCATCTTCCTGCTAATGATATCCATCTAATTGCGATACGAATCTCGACAAAATTTTGCAAGAGCAAAAAACTTTTACCCTCGAAAGTAAATGCAAGAAAAGGAATTTTTACATACATAGGACGACCCATTTTATATTTTGAACATCGAATTCGCGCTTATGCTTGTTCCATGTTAACGAAAGAGTTTATGAACATTTTTTGAACTCGAAGTGTTGTCTAACCTTCTCTTTTTATGTTTTGTGAAAATCTGAGCTAGTGAATTTGATATCTCTGTAGGAAGACACAGGTGGGTTGAATATGCAGAGAAGGGTCGTTATAATGCTTCTCAGGTGCCGCCCGAATGGCATGGCTGGCTCCACTACATAACCGATCACACAGGAGACGAGGTAACTCTCCTCGTTAAGGATATTTAGTATTAAATTATAGTTTACCATATATATCATATTTGATGTATTATTATAAGGTAAATATCTATCTTCCTTACTATAGGTATCTTTCCATACATTGTTCTTTCGATTTATTACTATTTCTATATCCTTGTAACTTATTTGATTATAAATAGAGAACCTTCACGCACCTAAGTGGTGAATTAAGCAAACATTCTGACTCCTTCTCTAGCATTTCTGTGAGTTTCAAAACACATCGAAGTTCGAGGACTAAATGTGTAATATTAAAAGTTTAAGGACCAAATAGACATAAACTTGAAAGCTCAAAGATTTATCGTTTTGCAGCTTCTGATGCTGAAACCGAGTAGGTATGGGATAGAACACAAGGAAAACTTCTCTGGGGAAGGTGAAGAACTAATCTACCATTCCAAGGGACATGCTCTTAATCCTGGGCAGAGAGATTGGACTCGCTATCAGTCATGGCAACCAACCAAGTCCTAAGTAATTTGTGTATCAATTCCTTTGTTCAATTTGGAAATCCATGGGATATCTGGTTGTGTTCTTTCCTGTTCTTCTTAATAAGCGACTTGTTGTTGTCTCTGCAAGCTGTGAATTATTTTTCATCGTGTTTACTGCAAACACATGAGGGATTTTCTGCATGTTTCTGTTCTTTTGTGCCACGTCTTAGCGACCACTGTGATAGAACGTTATATCGTGGCAGTGTATCAGATGTTATCAGCTTTGGGCATTCCTAAAATGAAAGTTAGTGTCTCGAAATGTTTGAAATTCATACTCAAATTTTGATATTA

mRNA sequence

GTATTAGACCATCTTACCCTCATCGTCCTGGAGGCAGCTGCTTGGACTGAAGAAGATCAGCAATCGAGAGTCGGAAGCGCAAGAACACCGAGAAGAGAAATGGCTTCGGTGGTGCGGGGGATTCTGAAGTCGATCAAAGACAAAGGCCTCGGTACTTTCTTGAGAGACCTCAAGGAAGAAGGCTACTTGAAATGCTTACCCGATGGAAACTTATTGCAAACCAAAATTCACAACATCGGTGCGACACTTGTGGGTGTCGATAAGTTTGGAAATAAATATTACCAGAAGCTCGATGAACAAACTCAATATGGAAGACACAGGTGGGTTGAATATGCAGAGAAGGGTCGTTATAATGCTTCTCAGGTGCCGCCCGAATGGCATGGCTGGCTCCACTACATAACCGATCACACAGGAGACGAGCTTCTGATGCTGAAACCGAGTAGGTATGGGATAGAACACAAGGAAAACTTCTCTGGGGAAGGTGAAGAACTAATCTACCATTCCAAGGGACATGCTCTTAATCCTGGGCAGAGAGATTGGACTCGCTATCAGTCATGGCAACCAACCAAGTCCTAAGTAATTTGTGTATCAATTCCTTTGTTCAATTTGGAAATCCATGGGATATCTGGTTGTGTTCTTTCCTGTTCTTCTTAATAAGCGACTTGTTGTTGTCTCTGCAAGCTGTGAATTATTTTTCATCGTGTTTACTGCAAACACATGAGGGATTTTCTGCATGTTTCTGTTCTTTTGTGCCACGTCTTAGCGACCACTGTGATAGAACGTTATATCGTGGCAGTGTATCAGATGTTATCAGCTTTGGGCATTCCTAAAATGAAAGTTAGTGTCTCGAAATGTTTGAAATTCATACTCAAATTTTGATATTA

Coding sequence (CDS)

ATGGCTTCGGTGGTGCGGGGGATTCTGAAGTCGATCAAAGACAAAGGCCTCGGTACTTTCTTGAGAGACCTCAAGGAAGAAGGCTACTTGAAATGCTTACCCGATGGAAACTTATTGCAAACCAAAATTCACAACATCGGTGCGACACTTGTGGGTGTCGATAAGTTTGGAAATAAATATTACCAGAAGCTCGATGAACAAACTCAATATGGAAGACACAGGTGGGTTGAATATGCAGAGAAGGGTCGTTATAATGCTTCTCAGGTGCCGCCCGAATGGCATGGCTGGCTCCACTACATAACCGATCACACAGGAGACGAGCTTCTGATGCTGAAACCGAGTAGGTATGGGATAGAACACAAGGAAAACTTCTCTGGGGAAGGTGAAGAACTAATCTACCATTCCAAGGGACATGCTCTTAATCCTGGGCAGAGAGATTGGACTCGCTATCAGTCATGGCAACCAACCAAGTCCTAA

Homology

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BLAST of CmoCh15G014650 vs. Swiss-Prot
Match: NDUAC_ARATH (Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Arabidopsis thaliana GN=At3g03100 PE=1 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 3.9e-73
Identity = 121/156 (77.56%), Postives = 140/156 (89.74%), Query Frame = 1


Query: 3   SVVRGILKSIKDKGLGTFLRDLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQ 62
           +V +  L++I++KGLG F+R ++EEG+++CLPDGNLLQTKIHNIGATLVGVDKFGNKYYQ
Sbjct: 4   TVAKSALEAIREKGLGGFMRMIREEGFMRCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQ 63

Query: 63  KLDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYITDHTGDELLMLKPSRYGIEHKE 122
           KL + TQYGRHRWVEYA K RYNASQVP EWHGWLH+ITDHTGDELL LKP RYG+EHKE
Sbjct: 64  KLGD-TQYGRHRWVEYASKDRYNASQVPAEWHGWLHFITDHTGDELLSLKPKRYGLEHKE 123

Query: 123 NFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS 159
           NFSGEG+  IYHSKGH LNPGQ++WTRYQSW PTK+
Sbjct: 124 NFSGEGDAYIYHSKGHTLNPGQKNWTRYQSWVPTKT 158

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BLAST of CmoCh15G014650 vs. Swiss-Prot
Match: NDUAC_CAEEL (Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Caenorhabditis elegans GN=Y94H6A.8 PE=3 SV=2)

HSP 1 Score: 76.6 bits (187), Expect = 2.6e-13
Identity = 48/112 (42.86%), Postives = 63/112 (56.25%), Query Frame = 1


Query: 49  TLVGVDKFGNKYYQKLDEQTQYGRHRWVEYAEKG--RYNASQVPPEWHGWLHYITDHTGD 108
           TLVG D FGN+YY+  +      R+RWVE+ +K    Y+A+QVPPEWH WLH+IT    D
Sbjct: 42  TLVGSDNFGNRYYE--NNAYFVPRNRWVEFPDKVWLDYDATQVPPEWHSWLHHIT----D 101

Query: 109 ELLMLKP---SRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQP 156
           +   +KP     + +EHKEN S      IY  K +   P     T+ Q WQP
Sbjct: 102 DAPSVKPPPTQDWVLEHKENTS------IYADKKYV--PYSTTRTKIQGWQP 139

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BLAST of CmoCh15G014650 vs. Swiss-Prot
Match: NDUAC_DICDI (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Dictyostelium discoideum GN=ndufa12 PE=2 SV=2)

HSP 1 Score: 76.3 bits (186), Expect = 3.5e-13
Identity = 35/78 (44.87%), Postives = 50/78 (64.10%), Query Frame = 1


Query: 49  TLVGVDKFGNKYYQKLDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYITDHTGDEL 108
           TLVGVDK GN+YY+  + Q  YGRHRWVEY +    + + +PPE+H W+H+++D    E+
Sbjct: 33  TLVGVDKVGNRYYE--NRQEIYGRHRWVEYGDYKSNDPTTIPPEYHSWIHHVSDKLPSEM 92

Query: 109 LMLKPSRYGIEHKENFSG 127
           L   P+ Y   H  N +G
Sbjct: 93  LPFSPT-YKRPHIANPTG 107

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BLAST of CmoCh15G014650 vs. Swiss-Prot
Match: NDUAC_PONPY (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Pongo pygmaeus GN=NDUFA12 PE=2 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.5e-11
Identity = 39/94 (41.49%), Postives = 51/94 (54.26%), Query Frame = 1


Query: 49  TLVGVDKFGNKYYQKLDEQTQYGRHRWVEYAEK--GR-----YNASQVPPEWHGWLHYIT 108
           TLVG DK+GNKYY+  D +  +GRHRWV Y  +  G+      + S VPPEWH WLH IT
Sbjct: 37  TLVGEDKYGNKYYE--DNKQFFGRHRWVVYTTEMNGKNTFWDVDGSMVPPEWHHWLHSIT 96

Query: 109 DHTGDELLMLKPSRYGIEHKENFSGEGEELIYHS 136
           D       +         HK N +G  E+ + +S
Sbjct: 97  DDPPTTKPLTARKFIWTNHKFNVTGTPEQYVPYS 128

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BLAST of CmoCh15G014650 vs. Swiss-Prot
Match: NDUAC_BOVIN (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Bos taurus GN=NDUFA12 PE=1 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 2.5e-11
Identity = 43/115 (37.39%), Postives = 58/115 (50.43%), Query Frame = 1


Query: 28  GYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLDEQTQYGRHRWVEYAEK--GR-- 87
           GYL+ L   N ++        TLVG DK+GNKYY+  D +  +GRHRWV Y  +  G+  
Sbjct: 22  GYLRVLFRANDVRV------GTLVGEDKYGNKYYE--DNKQFFGRHRWVIYTTEMNGKNT 81

Query: 88  ---YNASQVPPEWHGWLHYITDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHS 136
               + S VPPEWH WLH +TD                 HK N SG  ++ + +S
Sbjct: 82  FWDVDGSMVPPEWHRWLHCMTDDPPTVKPPTARKFIWTNHKFNLSGTPQQYVPYS 128

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BLAST of CmoCh15G014650 vs. TrEMBL
Match: A0A0A0KNC9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G172840 PE=4 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 1.3e-88
Identity = 152/158 (96.20%), Postives = 157/158 (99.37%), Query Frame = 1


Query: 1   MASVVRGILKSIKDKGLGTFLRDLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKY 60
           MASVVRGILKSIKDKG+GTF R+LKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKY
Sbjct: 1   MASVVRGILKSIKDKGIGTFWRELKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKY 60

Query: 61  YQKLDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYITDHTGDELLMLKPSRYGIEH 120
           YQK+DE+TQYGRHRWVEYAEKGRYNASQVPPEWHGWLH+ITDHTGDELLMLKPSRYGIEH
Sbjct: 61  YQKVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITDHTGDELLMLKPSRYGIEH 120

Query: 121 KENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS 159
           KENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
Sbjct: 121 KENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS 158

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BLAST of CmoCh15G014650 vs. TrEMBL
Match: B9S202_RICCO (NADH-ubiquinone oxidoreductase subunit B17.2, putative OS=Ricinus communis GN=RCOM_1324640 PE=4 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 6.9e-77
Identity = 132/156 (84.62%), Postives = 145/156 (92.95%), Query Frame = 1


Query: 3   SVVRGILKSIKDKGLGTFLRDLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQ 62
           +VV+G LKSI++KGLGTFLR+LKEEGYL+CL DGNLLQTKIHNIGATLVGVDKFGNKYY+
Sbjct: 4   TVVKGALKSIREKGLGTFLRELKEEGYLRCLADGNLLQTKIHNIGATLVGVDKFGNKYYE 63

Query: 63  KLDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYITDHTGDELLMLKPSRYGIEHKE 122
           +L +  Q+GRHRWVEYAEK RYNASQVPPEWHGWLH+ITDHTGDELLMLKP RYG EHKE
Sbjct: 64  RLQDM-QFGRHRWVEYAEKSRYNASQVPPEWHGWLHFITDHTGDELLMLKPKRYGAEHKE 123

Query: 123 NFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS 159
           N SGEGEE IYHSKGHALNPGQ+DWTRYQ WQPTK+
Sbjct: 124 NLSGEGEEFIYHSKGHALNPGQKDWTRYQLWQPTKT 158

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BLAST of CmoCh15G014650 vs. TrEMBL
Match: A0A0L9TAP6_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan442s006400 PE=4 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 9.0e-77
Identity = 130/154 (84.42%), Postives = 145/154 (94.16%), Query Frame = 1


Query: 1   MASVVRGILKSIKDKGLGTFLRDLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKY 60
           MASVV+ +LKSI++KG GTFLR+LK+EGYL+CLPDGNLLQTKIHNIGAT+VGVDKFGNKY
Sbjct: 1   MASVVKNVLKSIREKGFGTFLRELKDEGYLRCLPDGNLLQTKIHNIGATVVGVDKFGNKY 60

Query: 61  YQKLDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYITDHTGDELLMLKPSRYGIEH 120
           Y+KL + TQYGRHRWVEYAEK RYNASQVPPEWHGWLH+ITDHTGDELL+LKP RYG+EH
Sbjct: 61  YEKLGD-TQYGRHRWVEYAEKSRYNASQVPPEWHGWLHFITDHTGDELLLLKPKRYGVEH 120

Query: 121 KENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQ 155
           KEN SGEGE+ IYHSKGHALNPGQRDWTRYQ W+
Sbjct: 121 KENLSGEGEQYIYHSKGHALNPGQRDWTRYQPWE 153

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BLAST of CmoCh15G014650 vs. TrEMBL
Match: A0A0S3T653_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.10G234400 PE=4 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 9.0e-77
Identity = 130/154 (84.42%), Postives = 145/154 (94.16%), Query Frame = 1


Query: 1   MASVVRGILKSIKDKGLGTFLRDLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKY 60
           MASVV+ +LKSI++KG GTFLR+LK+EGYL+CLPDGNLLQTKIHNIGAT+VGVDKFGNKY
Sbjct: 1   MASVVKNVLKSIREKGFGTFLRELKDEGYLRCLPDGNLLQTKIHNIGATVVGVDKFGNKY 60

Query: 61  YQKLDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYITDHTGDELLMLKPSRYGIEH 120
           Y+KL + TQYGRHRWVEYAEK RYNASQVPPEWHGWLH+ITDHTGDELL+LKP RYG+EH
Sbjct: 61  YEKLGD-TQYGRHRWVEYAEKSRYNASQVPPEWHGWLHFITDHTGDELLLLKPKRYGVEH 120

Query: 121 KENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQ 155
           KEN SGEGE+ IYHSKGHALNPGQRDWTRYQ W+
Sbjct: 121 KENLSGEGEQYIYHSKGHALNPGQRDWTRYQPWE 153

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BLAST of CmoCh15G014650 vs. TrEMBL
Match: K4BJB2_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 9.0e-77
Identity = 130/157 (82.80%), Postives = 146/157 (92.99%), Query Frame = 1


Query: 1   MASVVRGILKSIKDKGLGTFLRDLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKY 60
           MASVVR I +SIK+KG+G FL++LK+EGY++CL DGNLLQTKIHNIGATLVGVDKFGNKY
Sbjct: 1   MASVVRSIFQSIKEKGIGNFLKELKQEGYVRCLADGNLLQTKIHNIGATLVGVDKFGNKY 60

Query: 61  YQKLDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYITDHTGDELLMLKPSRYGIEH 120
           Y+KL + TQYGRHRWVEYA+K RYNASQVPPEWHGWLH++TDHTGDELL+LKP RYGIEH
Sbjct: 61  YEKLGD-TQYGRHRWVEYAQKNRYNASQVPPEWHGWLHHVTDHTGDELLLLKPKRYGIEH 120

Query: 121 KENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTK 158
           KENFSGEG+  IYHSKGH LNPGQRDWTRYQ+WQPTK
Sbjct: 121 KENFSGEGDAYIYHSKGHTLNPGQRDWTRYQTWQPTK 156

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BLAST of CmoCh15G014650 vs. TAIR10
Match: AT3G03100.1 (AT3G03100.1 NADH:ubiquinone oxidoreductase, 17.2kDa subunit)

HSP 1 Score: 275.4 bits (703), Expect = 2.2e-74
Identity = 121/156 (77.56%), Postives = 140/156 (89.74%), Query Frame = 1


Query: 3   SVVRGILKSIKDKGLGTFLRDLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQ 62
           +V +  L++I++KGLG F+R ++EEG+++CLPDGNLLQTKIHNIGATLVGVDKFGNKYYQ
Sbjct: 4   TVAKSALEAIREKGLGGFMRMIREEGFMRCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQ 63

Query: 63  KLDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYITDHTGDELLMLKPSRYGIEHKE 122
           KL + TQYGRHRWVEYA K RYNASQVP EWHGWLH+ITDHTGDELL LKP RYG+EHKE
Sbjct: 64  KLGD-TQYGRHRWVEYASKDRYNASQVPAEWHGWLHFITDHTGDELLSLKPKRYGLEHKE 123

Query: 123 NFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS 159
           NFSGEG+  IYHSKGH LNPGQ++WTRYQSW PTK+
Sbjct: 124 NFSGEGDAYIYHSKGHTLNPGQKNWTRYQSWVPTKT 158

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BLAST of CmoCh15G014650 vs. NCBI nr
Match: gi|778700574|ref|XP_004143640.2| (PREDICTED: probable NADH dehydrogenase [ubiquinone])

HSP 1 Score: 333.6 bits (854), Expect = 1.9e-88
Identity = 152/158 (96.20%), Postives = 157/158 (99.37%), Query Frame = 1


Query: 1   MASVVRGILKSIKDKGLGTFLRDLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKY 60
           MASVVRGILKSIKDKG+GTF R+LKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKY
Sbjct: 1   MASVVRGILKSIKDKGIGTFWRELKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKY 60

Query: 61  YQKLDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYITDHTGDELLMLKPSRYGIEH 120
           YQK+DE+TQYGRHRWVEYAEKGRYNASQVPPEWHGWLH+ITDHTGDELLMLKPSRYGIEH
Sbjct: 61  YQKVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITDHTGDELLMLKPSRYGIEH 120

Query: 121 KENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS 159
           KENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS
Sbjct: 121 KENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS 158

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BLAST of CmoCh15G014650 vs. NCBI nr
Match: gi|659073080|ref|XP_008467243.1| (PREDICTED: probable NADH dehydrogenase [ubiquinone])

HSP 1 Score: 327.8 bits (839), Expect = 1.1e-86
Identity = 149/158 (94.30%), Postives = 155/158 (98.10%), Query Frame = 1


Query: 1   MASVVRGILKSIKDKGLGTFLRDLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKY 60
           MASVVRGILKSIKDKG+GTF R+LKEEGYLKCL DGNLLQTKIHNIGATLVGVDKFGNKY
Sbjct: 1   MASVVRGILKSIKDKGIGTFWRELKEEGYLKCLADGNLLQTKIHNIGATLVGVDKFGNKY 60

Query: 61  YQKLDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYITDHTGDELLMLKPSRYGIEH 120
           YQ++DE+TQYGRHRWVEYAEKGRYNASQVPPEWHGWLH+ITDHTGDELLMLKPSRYGIEH
Sbjct: 61  YQRVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITDHTGDELLMLKPSRYGIEH 120

Query: 121 KENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS 159
           KENFSGEGEE IYHSKGHALNPGQRDWTRYQSWQPTKS
Sbjct: 121 KENFSGEGEEFIYHSKGHALNPGQRDWTRYQSWQPTKS 158

[Close]

BLAST of CmoCh15G014650 vs. NCBI nr
Match: gi|743779162|ref|XP_010920046.1| (PREDICTED: probable NADH dehydrogenase [ubiquinone])

HSP 1 Score: 302.0 bits (772), Expect = 6.2e-79
Identity = 134/158 (84.81%), Postives = 149/158 (94.30%), Query Frame = 1


Query: 1   MASVVRGILKSIKDKGLGTFLRDLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKY 60
           MASVVRG+ K+I++KG+G F+++L+EEGY KCL DGNLLQTKIHNIGATLVGVDKFGNKY
Sbjct: 1   MASVVRGVFKAIREKGIGNFVKELREEGYTKCLLDGNLLQTKIHNIGATLVGVDKFGNKY 60

Query: 61  YQKLDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYITDHTGDELLMLKPSRYGIEH 120
           Y+KL + TQYGRHRWVEYAEKGRYNASQVPPEWHGWLH+ITDHTGDELLMLKP RYG+EH
Sbjct: 61  YEKL-QDTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITDHTGDELLMLKPKRYGVEH 120

Query: 121 KENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS 159
           KENFSGEG+E IYHSKGHALNPGQRDWTRYQ WQPTK+
Sbjct: 121 KENFSGEGDEYIYHSKGHALNPGQRDWTRYQPWQPTKN 157

[Close]

BLAST of CmoCh15G014650 vs. NCBI nr
Match: gi|672109142|ref|XP_008788681.1| (PREDICTED: probable NADH dehydrogenase [ubiquinone])

HSP 1 Score: 300.8 bits (769), Expect = 1.4e-78
Identity = 133/158 (84.18%), Postives = 149/158 (94.30%), Query Frame = 1


Query: 1   MASVVRGILKSIKDKGLGTFLRDLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKY 60
           MAS+VRG+ K+I++KG+G F+++++EEGY KCL DGNLLQTKIHNIGATLVGVDKFGNKY
Sbjct: 1   MASLVRGVFKAIREKGIGNFVKEIREEGYAKCLLDGNLLQTKIHNIGATLVGVDKFGNKY 60

Query: 61  YQKLDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYITDHTGDELLMLKPSRYGIEH 120
           Y+KL + TQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYITDHTGDELLMLKP RYG+EH
Sbjct: 61  YEKL-QDTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYITDHTGDELLMLKPRRYGVEH 120

Query: 121 KENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS 159
           KENFSGEG+E IYHSKGHALNPGQR+WTRYQ WQPTKS
Sbjct: 121 KENFSGEGDEYIYHSKGHALNPGQRNWTRYQPWQPTKS 157

[Close]

BLAST of CmoCh15G014650 vs. NCBI nr
Match: gi|951049484|ref|XP_014519966.1| (PREDICTED: probable NADH dehydrogenase [ubiquinone])

HSP 1 Score: 295.4 bits (755), Expect = 5.8e-77
Identity = 131/154 (85.06%), Postives = 145/154 (94.16%), Query Frame = 1


Query: 1   MASVVRGILKSIKDKGLGTFLRDLKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKY 60
           MASVV+ +LKSI++KG GTFLR+LK+EGYL+CLPDGNLLQTKIHNIGATLVGVDKFGNKY
Sbjct: 1   MASVVKNVLKSIREKGFGTFLRELKDEGYLRCLPDGNLLQTKIHNIGATLVGVDKFGNKY 60

Query: 61  YQKLDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYITDHTGDELLMLKPSRYGIEH 120
           Y+KL + TQYGRHRWVEYAEK RYNASQVPPEWHGWLH+ITDHTGDELL+LKP RYG+EH
Sbjct: 61  YEKLGD-TQYGRHRWVEYAEKSRYNASQVPPEWHGWLHFITDHTGDELLLLKPKRYGVEH 120

Query: 121 KENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQ 155
           KEN SGEGE+ IYHSKGHALNPGQRDWTRYQ W+
Sbjct: 121 KENLSGEGEQYIYHSKGHALNPGQRDWTRYQPWE 153

The following BLAST results are available for this feature:

BLAST of CmoCh15G014650 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NDUAC_ARATH	3.9e-73	77.56	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Arabid...	[more]
NDUAC_CAEEL	2.6e-13	42.86	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Caenor...	[more]
NDUAC_DICDI	3.5e-13	44.87	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Dictyostelium d...	[more]
NDUAC_PONPY	1.5e-11	41.49	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Pongo pygmaeus ...	[more]
NDUAC_BOVIN	2.5e-11	37.39	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Bos taurus GN=N...	[more]

BLAST of CmoCh15G014650 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KNC9_CUCSA	1.3e-88	96.20	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G172840 PE=4 SV=1	[more]
B9S202_RICCO	6.9e-77	84.62	NADH-ubiquinone oxidoreductase subunit B17.2, putative OS=Ricinus communis GN=RC...	[more]
A0A0L9TAP6_PHAAN	9.0e-77	84.42	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan442s006400 PE=4 SV=1	[more]
A0A0S3T653_PHAAN	9.0e-77	84.42	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.10G234400 PE=...	[more]
K4BJB2_SOLLC	9.0e-77	82.80	Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1	[more]

BLAST of CmoCh15G014650 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G03100.1	2.2e-74	77.56	NADH:ubiquinone oxidoreductase, 17.2kDa subunit	[more]

BLAST of CmoCh15G014650 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778700574\|ref\|XP_004143640.2\|	1.9e-88	96.20	PREDICTED: probable NADH dehydrogenase [ubiquinone]	[more]
gi\|659073080\|ref\|XP_008467243.1\|	1.1e-86	94.30	PREDICTED: probable NADH dehydrogenase [ubiquinone]	[more]
gi\|743779162\|ref\|XP_010920046.1\|	6.2e-79	84.81	PREDICTED: probable NADH dehydrogenase [ubiquinone]	[more]
gi\|672109142\|ref\|XP_008788681.1\|	1.4e-78	84.18	PREDICTED: probable NADH dehydrogenase [ubiquinone]	[more]
gi\|951049484\|ref\|XP_014519966.1\|	5.8e-77	85.06	PREDICTED: probable NADH dehydrogenase [ubiquinone]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007763	NDUFA12

Vocabulary: **Molecular Function**
Term	Definition
GO:0008137	NADH dehydrogenase (ubiquinone) activity
GO:0009055	electron carrier activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006120	mitochondrial electron transport, NADH to ubiquinone
biological_process	GO:0006814	sodium ion transport
biological_process	GO:0008150	biological_process
biological_process	GO:0009853	photorespiration
biological_process	GO:0006744	ubiquinone biosynthetic process
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
biological_process	GO:0051788	response to misfolded protein
biological_process	GO:0009735	response to cytokinin
biological_process	GO:0015992	proton transport
biological_process	GO:0080129	proteasome core complex assembly
cellular_component	GO:0005747	mitochondrial respiratory chain complex I
cellular_component	GO:0016020	membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0050897	cobalt ion binding
molecular_function	GO:0009055	electron carrier activity
molecular_function	GO:0008137	NADH dehydrogenase (ubiquinone) activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh15G014650.1	CmoCh15G014650.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007763	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12	PANTHER	PTHR12910	NADH-UBIQUINONE OXIDOREDUCTASE SUBUNIT B17.2	coord: 14..157 score: 4.3
IPR007763	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12	PFAM	PF05071	NDUFA12	coord: 49..155 score: 2.1
None	No IPR available	PANTHER	PTHR12910:SF2	NADH DEHYDROGENASE [UBIQUINONE] 1 ALPHA SUBCOMPLEX SUBUNIT 12	coord: 14..157 score: 4.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh15G014650	Cucsa.115450	Cucumber (Gy14) v1	cgycmoB0277
CmoCh15G014650	CmaCh15G013980	Cucurbita maxima (Rimu)	cmacmoB287
CmoCh15G014650	CmaCh02G010280	Cucurbita maxima (Rimu)	cmacmoB580
CmoCh15G014650	Cla002352	Watermelon (97103) v1	cmowmB264
CmoCh15G014650	Csa5G172840	Cucumber (Chinese Long) v2	cmocuB278
CmoCh15G014650	MELO3C005389	Melon (DHL92) v3.5.1	cmomeB244
CmoCh15G014650	ClCG01G005390	Watermelon (Charleston Gray)	cmowcgB244
CmoCh15G014650	CSPI05G08250	Wild cucumber (PI 183967)	cmocpiB287
CmoCh15G014650	Lsi09G005690	Bottle gourd (USVL1VR-Ls)	cmolsiB248
CmoCh15G014650	Cp4.1LG13g00560	Cucurbita pepo (Zucchini)	cmocpeB269
CmoCh15G014650	Cp4.1LG05g06900	Cucurbita pepo (Zucchini)	cmocpeB295
CmoCh15G014650	MELO3C005389.2	Melon (DHL92) v3.6.1	cmomedB277
CmoCh15G014650	CsaV3_5G005640	Cucumber (Chinese Long) v3	cmocucB0336
CmoCh15G014650	Cla97C01G005610	Watermelon (97103) v2	cmowmbB267
CmoCh15G014650	Bhi12G000649	Wax gourd	cmowgoB0365
CmoCh15G014650	CsGy5G005640	Cucumber (Gy14) v2	cgybcmoB573
CmoCh15G014650	Carg08448	Silver-seed gourd	carcmoB0965

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh15G014650	CmoCh02G010440	Cucurbita moschata (Rifu)	cmocmoB247

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh15G014650	Watermelon (97103) v1	cmowmB270
CmoCh15G014650	Silver-seed gourd	carcmoB1004