Cla97C01G005610 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C01G005610
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12
Location	Cla97Chr01 : 5392679 .. 5398729 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTCGGTGGTGCGGGGGATTCTGAAATCAATCAAGGACAAAGGGATCGGCACTTTCTGGAGAGAGCTCAAGGAAGAAGGCTATTTGTAATATTTTTCTCCCTGCTTTCCGTTTTTGATCCATGGTTTATGTGAGGTCCCTGGGTAATTCGAGGGTTTTTTTATTTTATTTTATTTGGTAACTTGACTATTGTTTCCGAATTCGAATTCGTGCCTTTTATTTGTTTTATGCATAATTGATGTGATGTATTGGTGTTTCTCTCATTGCTCTGAAGATCGCTGTTTCAATGTTCAATGACTGGGTGTTTCGTTCCCAATTCGAATGTTTCAGTCGTCGACAGATGTAATCATTTGTTAATGCACTCTTTCTATGGTCTTAAGGTGACCTATTTGAGATCGTTTTCGCAGATTTGTATTTCGTGTAGCTATGGAGTGCGCTAGGTTAACGGGAATGTGCAAGTGAAACATGGATATTGACCTTTACTGACATACATTCCTTTACTTTATTGTCTACTGATAAAATGTAGATTATTTATTATTATTATTATTTTTTTTCAAAATAGAAGCTCTTCAGAACCGCTTGTCCAAGTTTCTTCTCTTTTTTATCTAACTCCCTTTTTTCTATGCGAGTTTTGGGAATATCTCCATTAATAGACCCTACCTTCAGTTTAGTTGCAAGAAAGAATTTGTAAATGTTTTTTTTTGTTTTCAATTCTTGTTGGATCCCTCTCTGGCTAGCAAGTTGGTCTTTCATGTGCTTTGGAGGATTAGATCTCTAAGAAAGTTAGGTTCTTTACAGGATAAGTCTCACTCGGCCATGTGAACATTTTGAATAGGCTTATGAGAAAGATGACTACATTAATGGGGCCTTTTTTGTTGTATTCTTTGTCGGAAGGTAGAGGAAGATCTCAATCACCTTCTTTGAAGTTGTTAGTTTGTGAGATTTGTGAAGAATTGTTTCTTTCAAGAGTTTGGTCTTGAGTTAGCTTGCCAAAGATGTTCGTGTGACGATCGAGGAGTTCCTCCTCCATTTGCCTTTTGCCTTTTAGAGAGAAAGGGCTCTTATTGTGGGTTGCCAGGATGTGTGCTTTATTGTAGAGTATTTGGGAGGAGGGAGAGGGATCCTTGTGATGTTTGGTCCTTTGGTGAGGTTCTATGTTTCTCTTTGAGCTCTGGTTTCGAAGAATTTTTTATAATTGTTTTGTAGGTAGAATCTTAGTTGGAAACCCTTTCTTTAGAGTCTTTTTGCGAGTTTGGTTTTTTGTATGCTCTTGTATTTCTTCATTTTTTCTCAATCAAAGCTGTTGTTTCTATAGAAAAAATGATTAAGAAAAAGAAAAAAAGAGAGTTTATAGACCTGTGTGCAAAATATAACTTTTAGAAATGTTTATTCGAGCGTGAAGCATGTTTGGCTGTTCATAGAGATCTTAAATGAAATTGTTTGATTTTTTTCTTACCTGGAAATGTTTGGTTAGCAGATGATCAAATAATGGAATTGTGTTTGTGACATGTGCTTGATGTCATGTTACCATTTCAGATTCTAATATCCTCACTAAAATTAGTGGGGAGTCGGGGACTGGGTAGAATAGTGAAATTTGAAGGAGGACTGGAGGAGGGAGAGGGAACATAGAAATTCTTGGTTTTTGCATGTATTGTCATTGTAAATAGTTAGTTTTACTTTTTTGTACATTTTGTAAATGGGATACTGTCTCTGTTTCTCCCCAATATTAGAATCTGATTGTGTTAACTGTCTTTTATTTTGAATCTTGCAGGAAATGCCTCCCCGACGGAAACCTATTGTAAGTTAAATTTTCCATGCAATATTAAGCTTTCTTGTAAAATGGTTCCTTGGAACACACATGTATATGTAAAAAAATCATTGTTGCCTTGCTTTACATTTTGTTTATGCTCGCATGGAGCTCTGCATTATCCTTGGTTGGCAATGGAGAACCATGGGTTCTGCATATTGCATACTACTCCACCAACATTTGTCCGTAGACAGCCTAGACTGTCTCAACCATAATTTCTTGCTATAAGGTTGTGTCAAAGAATGTCATTTTCCTCCCCTTTTCTCTCTCTCTCTCTCTCTCACACACACACAGAAACAAATTTCGTTAATATGTGAAATTTACAAAAGGAGAGCCATGTTTATGAGGTCAGTAATTTGAAGACCACTCTTTCAAATCAGTAAAGCGATCCCTTTCCCATTTAGTTGGCAACTTTGTCCACTATGATCAACCCCTCTTCAGAAAATATATTAGACCATAGTAGGGGAGTGTATGGTATTCTGTGGGGATTGTGGGGCGAGAGAAATTATAGAATCTTCAGAGGATGGGAGAGGTCTTCCAGATGTTTGGTCCCTTATTAGATTCTTTGTTTCTCATCTTTCCCTACCTCTTGTTCTGCTCATTATTTTACAATAAGGGATAACTTATTTGATGGAAAATACAAATTGTAAGAAAGGATGAGAAATCCTCTCATGTGAAAACTAATGGAAATTGTAAAAAAACCCCTAAGTGGCATTATATAAAATGAAAAAAAAAAAGAAAAAAGGAGAAGGAGTTAATAGGAATGTTATCAGGGTATTATTAGGATATTAAGGGTATGTTGGTAATTAGCTAAAGAGGTTGTTATGATATTTGGTTGAAAATAGAGAGGGAGAGGAAGGGTGTAGTTAGACAATATTGTGGTGAGTGAACTAGGGTTTACGAGAGATCTCAAGAGGGGAGGATCTAGTCTAAGTACCTCGAATTACATAGTTTATTTCGTAGTTTGCTTACTGTTCATATTTCAATATATTTGGGTTCTCTCACGAACACAGACAAAAGCTCTTAGAGAGAGAGTGCCAAGGTTCTATAGACCCAACCAACTTCAAACAATTGTATGGGGTCCTAGACACATCTGAATTTTTCTTATTAGTGACGTTTTTTGGTGTTAAAGAAAAAGTTCTTCTCCCTTGCACTCAGCCCCTCTTGGTGCATCCTTCTTAAGAACTCACCAGAAAAGTGCAACTATCTCTTTGTTTCTTGCCCTATTTCATCTGGCCTATGGTCTCGGTTTTTTTTTGGTTCCACTGATGTGCATGGGTTCCTTATTTTTTGGTTAAGTAGATCGTGTTCCAGATTCTTTCTATTTAGCTGTTTTCACCTCAAAGTTTACATTGTGGTTTAATGTTGGCACTCTATCCTTTGGGTTATTTCCAGGAAGAAATAGAAGAATCTTTTGTGAGGAAGAGAAGCCTTGGGACCTTCTATGGGAGGATCATGTTCTTTATGGCTATATGGTTAAAGTCTAAGCCTCTTTTGTAGTTACTCTTTCTCAGTTAGTCAGTTTTGTTAATAAGTTGGAGATTTGTTTTGTAGCTCCTTGGTCTTCTTTGTACATCCTTGTCATCAGGACTTTTCAGTAGAAAGCTTGTTGTTTCTTATCAACTAAATAAAAAAAAAGGAAATACAAAAAGAATTTTCTTGTACAAAGCTTCAGTAGGTCATTTGGAGGCATTATGATAACTGAATTGTAATGATTGTACAAAATAAATATATTATGCTAATGTACTCAGCAAAGAGAATATGCTGAATAGACTTGCTAAATGGTCTCTGGTTCAGTGCATTCTACTTAATATATAAGCAATAAGCCTGAGAATGCTTAGAAGTTATGTTTTTCAATATAAAATGCTTTATTTCAAACCAATTCTCTCATTTGTATTTTGTGTTTTCTCTACTTGTACTGTTTTCTAGTTTAAACCCCCCCTTTAGAACTGAAGAACACTATTGTACAATCTATAGAACAGATCTTGTTCAAGTAAAGTCATAATTTAAACTCTCTTTTTCTTAAATTTTCCATAATATTAATATCTAATATTTTTGGAAATATTGGAGGGGATGAAGACTGTGTCAAGTGCAAAAATAGGGCGTGCGTTGCTATGGGCTTGCAGGTTACCTCAGATTTGGAGCTAGCCAAGTATTCAGCGGAGAGGCTTTTAGCACTTGAACCACAAAATGCTTCAAATAGTGTACTATTGTCAAATATGCATGCTGAGGCAGGGAGGTGGATGTGGTTGAGAGAGTCAGGGTCTTAAAGTTAATATATAATATTATTTATATTAATGTAAATACACATAAATGTTATATTTAGGCCTCGAGGTACTAAAAACTGCATAATCAATTAATTAAACAATGTACTGTAGTTTTTCCTCGATTTAAATGTTCTGGACAATTATGATATGATTTTGATTTTCATGATACTTCTCGTTTGCTTTTCACTTAATGTCAACAATTTTTTTTTTGTCTCTCATTCATACACTGAATAATTTCCTTTCCATGCAAATTATGCATTTTATTTGATTTAGAGGAGTAATCTTTATCATCCCTAATCTGTTCATTTTTCTTTTCAGGCAAACAAAAATCCACAACATTGGTGCGACACTTGTAGGTGTTGATAAGTTTGGTAATAAATATTACCAGAGGGTTGATGAAGAGACTCAATATGGTATTTTTTTTCCCATCTAATTGGTTTTTGTTTGAGTTTCACGATGTTACTGCCTATTTGCTATGGGTCAAGGTTGAGATGTGTAAACCAATGCTTAAGAAACTTACCATGTTATGTTTATATTTGCTTCTGCTAGATTAAGTTGCTTGAAGGCTTAAACAACAAATATTTCATATTCAGAGAAATAATGTTTAGGGAGTGTTGAGTTGGTTATTGTAGTTTGTGGGTTATAATAGTTTTTGTTTAGGGTGCATACTATTTTAGTCTGGGTAGGAAACAGTGTAACAAAGGGGAAAGAGAGAATAAGGGGGAAATAGTAAACATTGTAACAAAGAGGGATTTGAATAGTAATATTATAGTTAATTGTAGGTTATAATAGTTGGGGGCTCAAATACCTCCTTAACTGTGGAAAGATGCGTAGTGAATTTTACATTTCTGTAGGTAGACACAGGTGGGTTGAATATGCAGAGAAGGGTCGATATAATGCTTCTCAGGTGCCACCTGAATGGCACGGCTGGCTCCACCACATAACTGATCATACAGGAGACGAGGTAATTCCTGCACTTAAAATTCTCAACTAGGTTTTTGTGAAAATTTGTTAACCAAAAGTTGATAATATTATTAAACTCTTTTTTTATTTGCCACATGTGTCCTAATATACTTATAAAACTGTAACTTTAGTGACACATGAGCTTTCTTTTAACACATTTTAGCTAATTTTTATATGGATAAACCTAATTGAGACTTTTCTTAGTACATTCAAGTTAAATTAAAAAATTTAGAAGATTAAGAACGAAATTGAGAATTATCTAAACAATTATACTCTTTGGTGTATTTAGCCTAATAATAAAATATAAGAAAAATATCAATTTAAATCCTGGACTAATAGTTGTAACAATTTAAATCTTGAACTTTTGTAAGTGTATCAGTTTACACCCTTCATTATGTTCAATTTGAAAAAACCTCGTGTGAAACTTAAAATTGTATCAATTAAACTCCTAAACTTTCATAAATGAATCAATTTAGACTTTTAAGGCAAAATTTCCTTTGAAAACCGTCAATGCATATTTACTCTAATCATCCATTTTATAAAATTGACATTTGAAGAAGTCTACACACGTTTAAGACTCAATGCGTGGATGATTTTCAAACGTAATCATATTGAATGGCCTAAATTGATTGGCTTATGAAAATTTATGAGTTTAATTGACTTAAATTAAAGTTCCACACAATATTGATTGAATGAAATTTGGAGGGTGTAAATTGATACACTTATGAAAATTTAGGGTTTAAATTGATACAACCCCATAGTTTAGGGATATAAATTGATATTTGTCTTAAAAAAGTAAAAGAATGAGCCTTTTCGCCTTGCGATGTAGTAAGCAATATGAAAAATGTTTTGCAGCTTCTGATGCTGAAACCCAGTAGGTATGGAATAGAACACAAGGAAAACTTCTCTGGGGAAGGTGAAGAATTTATTTACCATTCCAAGGGACATGCTCTTAATCCTGGACAGAGAGATTGGACCCGATACCAGTCATGGCAACCAACCAAGTCATAA

mRNA sequence

ATGGCGTCGGTGGTGCGGGGGATTCTGAAATCAATCAAGGACAAAGGGATCGGCACTTTCTGGAGAGAGCTCAAGGAAGAAGGCTATTTGAAATGCCTCCCCGACGGAAACCTATTGCAAACAAAAATCCACAACATTGGTGCGACACTTGTAGGTGTTGATAAGTTTGGTAATAAATATTACCAGAGGGTTGATGAAGAGACTCAATATGGTAGACACAGGTGGGTTGAATATGCAGAGAAGGGTCGATATAATGCTTCTCAGGTGCCACCTGAATGGCACGGCTGGCTCCACCACATAACTGATCATACAGGAGACGAGCTTCTGATGCTGAAACCCAGTAGGTATGGAATAGAACACAAGGAAAACTTCTCTGGGGAAGGTGAAGAATTTATTTACCATTCCAAGGGACATGCTCTTAATCCTGGACAGAGAGATTGGACCCGATACCAGTCATGGCAACCAACCAAGTCATAA

Coding sequence (CDS)

ATGGCGTCGGTGGTGCGGGGGATTCTGAAATCAATCAAGGACAAAGGGATCGGCACTTTCTGGAGAGAGCTCAAGGAAGAAGGCTATTTGAAATGCCTCCCCGACGGAAACCTATTGCAAACAAAAATCCACAACATTGGTGCGACACTTGTAGGTGTTGATAAGTTTGGTAATAAATATTACCAGAGGGTTGATGAAGAGACTCAATATGGTAGACACAGGTGGGTTGAATATGCAGAGAAGGGTCGATATAATGCTTCTCAGGTGCCACCTGAATGGCACGGCTGGCTCCACCACATAACTGATCATACAGGAGACGAGCTTCTGATGCTGAAACCCAGTAGGTATGGAATAGAACACAAGGAAAACTTCTCTGGGGAAGGTGAAGAATTTATTTACCATTCCAAGGGACATGCTCTTAATCCTGGACAGAGAGATTGGACCCGATACCAGTCATGGCAACCAACCAAGTCATAA

Protein sequence

MASVVRGILKSIKDKGIGTFWRELKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQRVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITDHTGDELLMLKPSRYGIEHKENFSGEGEEFIYHSKGHALNPGQRDWTRYQSWQPTKS

Homology

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BLAST of Cla97C01G005610 vs. NCBI nr
Match: XP_008467243.1 (PREDICTED: probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 [Cucumis melo])

HSP 1 Score: 342.8 bits (878), Expect = 6.1e-91
Identity = 157/158 (99.37%), Postives = 157/158 (99.37%), Query Frame = 0


Query: 1   MASVVRGILKSIKDKGIGTFWRELKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKY 60
           MASVVRGILKSIKDKGIGTFWRELKEEGYLKCL DGNLLQTKIHNIGATLVGVDKFGNKY
Sbjct: 1   MASVVRGILKSIKDKGIGTFWRELKEEGYLKCLADGNLLQTKIHNIGATLVGVDKFGNKY 60

Query: 61  YQRVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITDHTGDELLMLKPSRYGIEH 120
           YQRVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITDHTGDELLMLKPSRYGIEH
Sbjct: 61  YQRVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITDHTGDELLMLKPSRYGIEH 120

Query: 121 KENFSGEGEEFIYHSKGHALNPGQRDWTRYQSWQPTKS 159
           KENFSGEGEEFIYHSKGHALNPGQRDWTRYQSWQPTKS
Sbjct: 121 KENFSGEGEEFIYHSKGHALNPGQRDWTRYQSWQPTKS 158

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BLAST of Cla97C01G005610 vs. NCBI nr
Match: XP_004143640.2 (PREDICTED: probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 [Cucumis sativus] >KGN50404.1 hypothetical protein Csa_5G172840 [Cucumis sativus])

HSP 1 Score: 342.4 bits (877), Expect = 8.0e-91
Identity = 156/158 (98.73%), Postives = 157/158 (99.37%), Query Frame = 0


Query: 1   MASVVRGILKSIKDKGIGTFWRELKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKY 60
           MASVVRGILKSIKDKGIGTFWRELKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKY
Sbjct: 1   MASVVRGILKSIKDKGIGTFWRELKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKY 60

Query: 61  YQRVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITDHTGDELLMLKPSRYGIEH 120
           YQ+VDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITDHTGDELLMLKPSRYGIEH
Sbjct: 61  YQKVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITDHTGDELLMLKPSRYGIEH 120

Query: 121 KENFSGEGEEFIYHSKGHALNPGQRDWTRYQSWQPTKS 159
           KENFSGEGEE IYHSKGHALNPGQRDWTRYQSWQPTKS
Sbjct: 121 KENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS 158

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BLAST of Cla97C01G005610 vs. NCBI nr
Match: XP_022958111.1 (probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 [Cucurbita moschata])

HSP 1 Score: 337.8 bits (865), Expect = 2.0e-89
Identity = 153/158 (96.84%), Postives = 157/158 (99.37%), Query Frame = 0


Query: 1   MASVVRGILKSIKDKGIGTFWRELKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKY 60
           MASVVRGI+KSIKDKGIGTFWRELKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKY
Sbjct: 1   MASVVRGIVKSIKDKGIGTFWRELKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKY 60

Query: 61  YQRVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITDHTGDELLMLKPSRYGIEH 120
           YQ++DEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLH+ITDHTGDELLMLKPSRYGIEH
Sbjct: 61  YQKLDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYITDHTGDELLMLKPSRYGIEH 120

Query: 121 KENFSGEGEEFIYHSKGHALNPGQRDWTRYQSWQPTKS 159
           KENFSGEGEE IYHSKGHALNPGQRDWTRYQSWQPTKS
Sbjct: 121 KENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS 158

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BLAST of Cla97C01G005610 vs. NCBI nr
Match: XP_022159660.1 (probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 [Momordica charantia])

HSP 1 Score: 335.9 bits (860), Expect = 7.5e-89
Identity = 150/158 (94.94%), Postives = 156/158 (98.73%), Query Frame = 0


Query: 1   MASVVRGILKSIKDKGIGTFWRELKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKY 60
           MASVVRG+LKSIKDKGIG FWRELKEEGYLKCL DGNLLQTKIHNIGATLVG+DKFGNKY
Sbjct: 1   MASVVRGVLKSIKDKGIGNFWRELKEEGYLKCLGDGNLLQTKIHNIGATLVGIDKFGNKY 60

Query: 61  YQRVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITDHTGDELLMLKPSRYGIEH 120
           YQRVDE+TQYGRHRWVEYAEKGRYNASQVPPEWHGWLHH+TDHTGDELLMLKPSRYGIEH
Sbjct: 61  YQRVDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHVTDHTGDELLMLKPSRYGIEH 120

Query: 121 KENFSGEGEEFIYHSKGHALNPGQRDWTRYQSWQPTKS 159
           +ENFSGEG+EFIYHSKGHALNPGQRDWTRYQSWQPTKS
Sbjct: 121 RENFSGEGDEFIYHSKGHALNPGQRDWTRYQSWQPTKS 158

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BLAST of Cla97C01G005610 vs. NCBI nr
Match: XP_022996140.1 (probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 [Cucurbita maxima])

HSP 1 Score: 335.5 bits (859), Expect = 9.8e-89
Identity = 152/158 (96.20%), Postives = 156/158 (98.73%), Query Frame = 0


Query: 1   MASVVRGILKSIKDKGIGTFWRELKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKY 60
           MASVVRGI+KSIKDKGIGTFWRELKEEGYLKCLPDGNLLQTKIH IGATLVGVDKFGNKY
Sbjct: 1   MASVVRGIVKSIKDKGIGTFWRELKEEGYLKCLPDGNLLQTKIHKIGATLVGVDKFGNKY 60

Query: 61  YQRVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITDHTGDELLMLKPSRYGIEH 120
           YQ++DEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLH+ITDHTGDELLMLKPSRYGIEH
Sbjct: 61  YQKLDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYITDHTGDELLMLKPSRYGIEH 120

Query: 121 KENFSGEGEEFIYHSKGHALNPGQRDWTRYQSWQPTKS 159
           KENFSGEGEE IYHSKGHALNPGQRDWTRYQSWQPTKS
Sbjct: 121 KENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS 158

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BLAST of Cla97C01G005610 vs. TrEMBL
Match: tr|A0A1S3CUD4|A0A1S3CUD4_CUCME (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Cucumis melo OX=3656 GN=LOC103504642 PE=3 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 4.1e-91
Identity = 157/158 (99.37%), Postives = 157/158 (99.37%), Query Frame = 0


Query: 1   MASVVRGILKSIKDKGIGTFWRELKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKY 60
           MASVVRGILKSIKDKGIGTFWRELKEEGYLKCL DGNLLQTKIHNIGATLVGVDKFGNKY
Sbjct: 1   MASVVRGILKSIKDKGIGTFWRELKEEGYLKCLADGNLLQTKIHNIGATLVGVDKFGNKY 60

Query: 61  YQRVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITDHTGDELLMLKPSRYGIEH 120
           YQRVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITDHTGDELLMLKPSRYGIEH
Sbjct: 61  YQRVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITDHTGDELLMLKPSRYGIEH 120

Query: 121 KENFSGEGEEFIYHSKGHALNPGQRDWTRYQSWQPTKS 159
           KENFSGEGEEFIYHSKGHALNPGQRDWTRYQSWQPTKS
Sbjct: 121 KENFSGEGEEFIYHSKGHALNPGQRDWTRYQSWQPTKS 158

[Close]

BLAST of Cla97C01G005610 vs. TrEMBL
Match: tr|A0A0A0KNC9|A0A0A0KNC9_CUCSA (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Cucumis sativus OX=3659 GN=Csa_5G172840 PE=3 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 5.3e-91
Identity = 156/158 (98.73%), Postives = 157/158 (99.37%), Query Frame = 0


Query: 1   MASVVRGILKSIKDKGIGTFWRELKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKY 60
           MASVVRGILKSIKDKGIGTFWRELKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKY
Sbjct: 1   MASVVRGILKSIKDKGIGTFWRELKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKY 60

Query: 61  YQRVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITDHTGDELLMLKPSRYGIEH 120
           YQ+VDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITDHTGDELLMLKPSRYGIEH
Sbjct: 61  YQKVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITDHTGDELLMLKPSRYGIEH 120

Query: 121 KENFSGEGEEFIYHSKGHALNPGQRDWTRYQSWQPTKS 159
           KENFSGEGEE IYHSKGHALNPGQRDWTRYQSWQPTKS
Sbjct: 121 KENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS 158

[Close]

BLAST of Cla97C01G005610 vs. TrEMBL
Match: tr|A0A2H3XTU4|A0A2H3XTU4_PHODC (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Phoenix dactylifera OX=42345 GN=LOC103706380 PE=3 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 5.2e-78
Identity = 132/158 (83.54%), Postives = 150/158 (94.94%), Query Frame = 0


Query: 1   MASVVRGILKSIKDKGIGTFWRELKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKY 60
           MAS+VRG+ K+I++KGIG F +E++EEGY KCL DGNLLQTKIHNIGATLVGVDKFGNKY
Sbjct: 1   MASLVRGVFKAIREKGIGNFVKEIREEGYAKCLLDGNLLQTKIHNIGATLVGVDKFGNKY 60

Query: 61  YQRVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITDHTGDELLMLKPSRYGIEH 120
           Y+++ ++TQYGRHRWVEYAEKGRYNASQVPPEWHGWLH+ITDHTGDELLMLKP RYG+EH
Sbjct: 61  YEKL-QDTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYITDHTGDELLMLKPRRYGVEH 120

Query: 121 KENFSGEGEEFIYHSKGHALNPGQRDWTRYQSWQPTKS 159
           KENFSGEG+E+IYHSKGHALNPGQR+WTRYQ WQPTKS
Sbjct: 121 KENFSGEGDEYIYHSKGHALNPGQRNWTRYQPWQPTKS 157

[Close]

BLAST of Cla97C01G005610 vs. TrEMBL
Match: tr|U5CQW5|U5CQW5_AMBTC (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Amborella trichopoda OX=13333 GN=AMTR_s00048p00149070 PE=3 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 7.4e-77
Identity = 130/158 (82.28%), Postives = 148/158 (93.67%), Query Frame = 0


Query: 1   MASVVRGILKSIKDKGIGTFWRELKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKY 60
           MASVVR  +K+IK+KG+  F+RELKEEGYL+CLPDGNLLQTKIHNIGATLVGVDKFGNKY
Sbjct: 1   MASVVRAAMKAIKEKGLRNFFRELKEEGYLRCLPDGNLLQTKIHNIGATLVGVDKFGNKY 60

Query: 61  YQRVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITDHTGDELLMLKPSRYGIEH 120
           Y+R+ E+TQ+GRHRWVEY +KG YNASQVPPEWHGWLH ITDHTGDELLMLKP RYG+EH
Sbjct: 61  YERL-EDTQFGRHRWVEYGDKGCYNASQVPPEWHGWLHFITDHTGDELLMLKPKRYGVEH 120

Query: 121 KENFSGEGEEFIYHSKGHALNPGQRDWTRYQSWQPTKS 159
           +ENFSGEG+E+IYHSKGH+LNPGQ+DWTRYQ WQPTK+
Sbjct: 121 RENFSGEGDEYIYHSKGHSLNPGQKDWTRYQPWQPTKA 157

[Close]

BLAST of Cla97C01G005610 vs. TrEMBL
Match: tr|K4BJB2|K4BJB2_SOLLC (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Solanum lycopersicum OX=4081 GN=101267099 PE=3 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 7.4e-77
Identity = 130/157 (82.80%), Postives = 146/157 (92.99%), Query Frame = 0


Query: 1   MASVVRGILKSIKDKGIGTFWRELKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKY 60
           MASVVR I +SIK+KGIG F +ELK+EGY++CL DGNLLQTKIHNIGATLVGVDKFGNKY
Sbjct: 1   MASVVRSIFQSIKEKGIGNFLKELKQEGYVRCLADGNLLQTKIHNIGATLVGVDKFGNKY 60

Query: 61  YQRVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITDHTGDELLMLKPSRYGIEH 120
           Y+++  +TQYGRHRWVEYA+K RYNASQVPPEWHGWLHH+TDHTGDELL+LKP RYGIEH
Sbjct: 61  YEKLG-DTQYGRHRWVEYAQKNRYNASQVPPEWHGWLHHVTDHTGDELLLLKPKRYGIEH 120

Query: 121 KENFSGEGEEFIYHSKGHALNPGQRDWTRYQSWQPTK 158
           KENFSGEG+ +IYHSKGH LNPGQRDWTRYQ+WQPTK
Sbjct: 121 KENFSGEGDAYIYHSKGHTLNPGQRDWTRYQTWQPTK 156

[Close]

BLAST of Cla97C01G005610 vs. Swiss-Prot
Match: sp|Q9M9M9|NDUAC_ARATH (Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Arabidopsis thaliana OX=3702 GN=At3g03100 PE=1 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 7.4e-72
Identity = 118/156 (75.64%), Postives = 139/156 (89.10%), Query Frame = 0


Query: 3   SVVRGILKSIKDKGIGTFWRELKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQ 62
           +V +  L++I++KG+G F R ++EEG+++CLPDGNLLQTKIHNIGATLVGVDKFGNKYYQ
Sbjct: 4   TVAKSALEAIREKGLGGFMRMIREEGFMRCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQ 63

Query: 63  RVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITDHTGDELLMLKPSRYGIEHKE 122
           ++  +TQYGRHRWVEYA K RYNASQVP EWHGWLH ITDHTGDELL LKP RYG+EHKE
Sbjct: 64  KLG-DTQYGRHRWVEYASKDRYNASQVPAEWHGWLHFITDHTGDELLSLKPKRYGLEHKE 123

Query: 123 NFSGEGEEFIYHSKGHALNPGQRDWTRYQSWQPTKS 159
           NFSGEG+ +IYHSKGH LNPGQ++WTRYQSW PTK+
Sbjct: 124 NFSGEGDAYIYHSKGHTLNPGQKNWTRYQSWVPTKT 158

[Close]

BLAST of Cla97C01G005610 vs. Swiss-Prot
Match: sp|Q9N2W7|NDUAC_CAEEL (Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Caenorhabditis elegans OX=6239 GN=Y94H6A.8 PE=3 SV=2)

HSP 1 Score: 80.9 bits (198), Expect = 1.4e-14
Identity = 57/146 (39.04%), Postives = 77/146 (52.74%), Query Frame = 0


Query: 17  IGTFWRELKEEGYLKCLPDGNLLQ--TKIHNIGATLVGVDKFGNKYYQRVDEETQYGRHR 76
           I  F + +KE G +K +     L   T++     TLVG D FGN+YY+  +      R+R
Sbjct: 12  IQKFGQMVKEIGGVKAVLKKRYLMDATRV----GTLVGSDNFGNRYYE--NNAYFVPRNR 71

Query: 77  WVEYAEKG--RYNASQVPPEWHGWLHHITDHTGDELLMLKP---SRYGIEHKENFSGEGE 136
           WVE+ +K    Y+A+QVPPEWH WLHHIT    D+   +KP     + +EHKEN S    
Sbjct: 72  WVEFPDKVWLDYDATQVPPEWHSWLHHIT----DDAPSVKPPPTQDWVLEHKENTS---- 131

Query: 137 EFIYHSKGHALNPGQRDWTRYQSWQP 156
             IY  K +   P     T+ Q WQP
Sbjct: 132 --IYADKKYV--PYSTTRTKIQGWQP 139

[Close]

BLAST of Cla97C01G005610 vs. Swiss-Prot
Match: sp|Q54MV7|NDUAC_DICDI (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Dictyostelium discoideum OX=44689 GN=ndufa12 PE=2 SV=2)

HSP 1 Score: 77.0 bits (188), Expect = 2.1e-13
Identity = 35/78 (44.87%), Postives = 50/78 (64.10%), Query Frame = 0


Query: 49  TLVGVDKFGNKYYQRVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITDHTGDEL 108
           TLVGVDK GN+YY+  + +  YGRHRWVEY +    + + +PPE+H W+HH++D    E+
Sbjct: 33  TLVGVDKVGNRYYE--NRQEIYGRHRWVEYGDYKSNDPTTIPPEYHSWIHHVSDKLPSEM 92

Query: 109 LMLKPSRYGIEHKENFSG 127
           L   P+ Y   H  N +G
Sbjct: 93  LPFSPT-YKRPHIANPTG 107

[Close]

BLAST of Cla97C01G005610 vs. Swiss-Prot
Match: sp|Q0MQ85|NDUAC_PONPY (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Pongo pygmaeus OX=9600 GN=NDUFA12 PE=2 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 5.1e-12
Identity = 39/94 (41.49%), Postives = 52/94 (55.32%), Query Frame = 0


Query: 49  TLVGVDKFGNKYYQRVDEETQYGRHRWVEYAEK--GR-----YNASQVPPEWHGWLHHIT 108
           TLVG DK+GNKYY+  D +  +GRHRWV Y  +  G+      + S VPPEWH WLH IT
Sbjct: 37  TLVGEDKYGNKYYE--DNKQFFGRHRWVVYTTEMNGKNTFWDVDGSMVPPEWHHWLHSIT 96

Query: 109 DHTGDELLMLKPSRYGIEHKENFSGEGEEFIYHS 136
           D       +         HK N +G  E+++ +S
Sbjct: 97  DDPPTTKPLTARKFIWTNHKFNVTGTPEQYVPYS 128

[Close]

BLAST of Cla97C01G005610 vs. Swiss-Prot
Match: sp|Q0MQ86|NDUAC_GORGO (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Gorilla gorilla gorilla OX=9595 GN=NDUFA12 PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 8.6e-12
Identity = 38/94 (40.43%), Postives = 52/94 (55.32%), Query Frame = 0


Query: 49  TLVGVDKFGNKYYQRVDEETQYGRHRWVEYAEK--GR-----YNASQVPPEWHGWLHHIT 108
           TLVG DK+GNKYY+  D +  +GRHRWV Y  +  G+      + S VPPEWH WLH +T
Sbjct: 37  TLVGEDKYGNKYYE--DNKQFFGRHRWVVYTTEMNGKNTFWDVDGSMVPPEWHRWLHSMT 96

Query: 109 DHTGDELLMLKPSRYGIEHKENFSGEGEEFIYHS 136
           D       +         HK N +G  E+++ +S
Sbjct: 97  DDPPTTKPLTARKFIWTNHKFNMTGTPEQYVPYS 128

[Close]

BLAST of Cla97C01G005610 vs. TAIR10
Match: AT3G03100.1 (NADH:ubiquinone oxidoreductase, 17.2kDa subunit)

HSP 1 Score: 271.2 bits (692), Expect = 4.1e-73
Identity = 118/156 (75.64%), Postives = 139/156 (89.10%), Query Frame = 0


Query: 3   SVVRGILKSIKDKGIGTFWRELKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQ 62
           +V +  L++I++KG+G F R ++EEG+++CLPDGNLLQTKIHNIGATLVGVDKFGNKYYQ
Sbjct: 4   TVAKSALEAIREKGLGGFMRMIREEGFMRCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQ 63

Query: 63  RVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITDHTGDELLMLKPSRYGIEHKE 122
           ++  +TQYGRHRWVEYA K RYNASQVP EWHGWLH ITDHTGDELL LKP RYG+EHKE
Sbjct: 64  KLG-DTQYGRHRWVEYASKDRYNASQVPAEWHGWLHFITDHTGDELLSLKPKRYGLEHKE 123

Query: 123 NFSGEGEEFIYHSKGHALNPGQRDWTRYQSWQPTKS 159
           NFSGEG+ +IYHSKGH LNPGQ++WTRYQSW PTK+
Sbjct: 124 NFSGEGDAYIYHSKGHTLNPGQKNWTRYQSWVPTKT 158

The following BLAST results are available for this feature:

BLAST of Cla97C01G005610 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008467243.1	6.1e-91	99.37	PREDICTED: probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1...	[more]
XP_004143640.2	8.0e-91	98.73	PREDICTED: probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1...	[more]
XP_022958111.1	2.0e-89	96.84	probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 [Cucurbit...	[more]
XP_022159660.1	7.5e-89	94.94	probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 [Momordic...	[more]
XP_022996140.1	9.8e-89	96.20	probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 [Cucurbit...	[more]

BLAST of Cla97C01G005610 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CUD4\|A0A1S3CUD4_CUCME	4.1e-91	99.37	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Cucumis melo OX...	[more]
tr\|A0A0A0KNC9\|A0A0A0KNC9_CUCSA	5.3e-91	98.73	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Cucumis sativus...	[more]
tr\|A0A2H3XTU4\|A0A2H3XTU4_PHODC	5.2e-78	83.54	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Phoenix dactyli...	[more]
tr\|U5CQW5\|U5CQW5_AMBTC	7.4e-77	82.28	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Amborella trich...	[more]
tr\|K4BJB2\|K4BJB2_SOLLC	7.4e-77	82.80	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Solanum lycoper...	[more]

BLAST of Cla97C01G005610 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9M9M9\|NDUAC_ARATH	7.4e-72	75.64	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Arabid...	[more]
sp\|Q9N2W7\|NDUAC_CAEEL	1.4e-14	39.04	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Caenor...	[more]
sp\|Q54MV7\|NDUAC_DICDI	2.1e-13	44.87	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Dictyostelium d...	[more]
sp\|Q0MQ85\|NDUAC_PONPY	5.1e-12	41.49	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Pongo pygmaeus ...	[more]
sp\|Q0MQ86\|NDUAC_GORGO	8.6e-12	40.43	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Gorilla gorilla...	[more]

BLAST of Cla97C01G005610 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G03100.1	4.1e-73	75.64	NADH:ubiquinone oxidoreductase, 17.2kDa subunit	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0009055	electron carrier activity
GO:0008137	NADH dehydrogenase (ubiquinone) activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **INTERPRO**
Term	Definition
IPR007763	NDUFA12

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
biological_process	GO:0080129	proteasome core complex assembly
biological_process	GO:0008150	biological_process
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
biological_process	GO:0006744	ubiquinone biosynthetic process
biological_process	GO:0006814	sodium ion transport
biological_process	GO:0051788	response to misfolded protein
biological_process	GO:0009735	response to cytokinin
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0015992	proton transport
biological_process	GO:0009853	photorespiration
biological_process	GO:0006120	mitochondrial electron transport, NADH to ubiquinone
biological_process	GO:0006979	response to oxidative stress
cellular_component	GO:0070469	respiratory chain
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005743	mitochondrial inner membrane
cellular_component	GO:0005747	mitochondrial respiratory chain complex I
cellular_component	GO:0016020	membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008137	NADH dehydrogenase (ubiquinone) activity
molecular_function	GO:0009055	electron carrier activity
molecular_function	GO:0050897	cobalt ion binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C01G005610.1	Cla97C01G005610.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007763	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12	PFAM	PF05071	NDUFA12	coord: 49..155 e-value: 1.2E-26 score: 93.3
IPR007763	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12	PANTHER	PTHR12910	NADH-UBIQUINONE OXIDOREDUCTASE SUBUNIT B17.2	coord: 3..157
None	No IPR available	PANTHER	PTHR12910:SF2	NADH DEHYDROGENASE UBIQUINONE 1 ALPHA SUBCOMPLEX SUBUNIT 12	coord: 3..157

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C01G005610	Cla002352	Watermelon (97103) v1	wmwmbB238
Cla97C01G005610	Csa5G172840	Cucumber (Chinese Long) v2	cuwmbB336
Cla97C01G005610	MELO3C005389	Melon (DHL92) v3.5.1	mewmbB009
Cla97C01G005610	ClCG01G005390	Watermelon (Charleston Gray)	wcgwmbB089
Cla97C01G005610	CSPI05G08250	Wild cucumber (PI 183967)	cpiwmbB349
Cla97C01G005610	Cucsa.115450	Cucumber (Gy14) v1	cgywmbB166
Cla97C01G005610	CmaCh02G010280	Cucurbita maxima (Rimu)	cmawmbB601
Cla97C01G005610	CmaCh15G013980	Cucurbita maxima (Rimu)	cmawmbB285
Cla97C01G005610	CmoCh15G014650	Cucurbita moschata (Rifu)	cmowmbB267
Cla97C01G005610	CmoCh02G010440	Cucurbita moschata (Rifu)	cmowmbB576
Cla97C01G005610	Lsi09G005690	Bottle gourd (USVL1VR-Ls)	lsiwmbB007
Cla97C01G005610	CsGy5G005640	Cucumber (Gy14) v2	cgybwmbB319
Cla97C01G005610	MELO3C005389.2	Melon (DHL92) v3.6.1	medwmbB007
Cla97C01G005610	Carg08448	Silver-seed gourd	carwmbB0741
Cla97C01G005610	CsaV3_5G005640	Cucumber (Chinese Long) v3	cucwmbB351
Cla97C01G005610	Bhi12G000649	Wax gourd	wgowmbB060

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C01G005610	Wax gourd	wgowmbB064
Cla97C01G005610	Silver-seed gourd	carwmbB0774