Lsi08G015210 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGTGGTTTACACTCGAATGACCCCCAAATTCATCGAACCAAATTGCCCTCCGGAATTCATTAATAATTATTAATTTTTTTTTCTCCTTATTGCGTTTTGGGCTAATTCAGATCAGAGCCGGCGATGAAATCAGTCTCCAATCTCACTTCCTCACTTCCTCTTTCGCCGTCACCGTCACCGTCGCACTGCAGGACCACCGCGGTCTTCACTCCTCGTCGACGGATCGGTTCTTCGTCAACAGCCGTCGGCGGCGCTTTCTCGTCGTGTCGTAAACATTTGACTCGCTTTCCACAGCATCGATCTTCGTTTTGGCCTCTGCGATGCAATGGTAATTCGAATTCCCGATCTCTTGTGTTGGTCAATATTCGTCGACACAGGTCAAAATTGAACTCCTCTATGCGGGAATTCCGGTAATGGGGGGTAAGAATTTTGTAATGGCGGGGCATTTTGGTCATTTGGATTCTCTGTTGTGATTGTGAAACGCTCTTTCCCCCAACTTTTTGTGCAATAAATAATAAATTAAACCTATGCTTGCTTTCCGTATTGGCCGCTGCCCCTCTCTTTCTCTCTGGTTTTACCTCCGTGAAACTGTGTTGATCGACTGTCCGGCGGCTGTTTGACAGTGAGGGAGACGGTGCCGGATCAAGAAATGGCGTCCACCAATGAACAAGACCCACGCATAGCCAAAATCTCCAAGGCCATTCGAGTTATCCCAGATTTTCCTAAACCAGGTACTCATCTTGTTTTCATTGAAACCTCGAATGGTCGTTTCTAGGCTGAGAGATCCATTTTTGCTGTCTTTATGCTCGTTTGGGTTTTGTTCGTGTGTGATGGGGTATTGTTTGGTATTAAGTTTTGAGCTGAATAGATTTTCTTGTTCCAAAATTTCTTTGAGTAACCAACACCCTCTTCCTCTTTTGGTAGGGATTTTGTTTCAGGATATTACAACTTTGCTTCTTGATACAAAGGCCTTCAAGGATACTATCGATTTGTTCGTGGAGAGGTACAGAGAGAAGGATATCTCTGTCGTCGCTGGTAAATTCTACCTTCAAAAGGATCATTTACATCAGGAGGGGAAGTTATTTTGTGGTTTAACTTGAACCCCATTGATTGATCTTTTTTGTTCTGCAGGAATTGAGGCGAGAGGGTTCATTTTTGGCCCTCCGATAGCTCTGGCTATTGGTGCAAAATTTGTTCCCATGAGAAAACCGAAGAAGTTGCCTGGTACAATTTTGTGCTTTACTCATCTTTGTTGTACCCTTCTGAATCTGTGTATAGTTTCAGCTACCGATTCAAGCATAATGTTTCTGCATCTGACTAAAACTCTTCATGCATATGCTATCACGTTTGATGTTTGCTTTCTATAACCGGGTAAAGAAGTGAGAAATCTGCATGCCTTCGATGGTTAATCTCGTTTCCGATGCAAGAATCTTCAAGCATTAATTGATATTCGAAGTTATTTTTGCTATCTTGATCACTTAAGCCTAGTTTGATAGCTCTTTGGTTTTGTAACCTTCTACCTATGAGTTTCTTTGTTTTGTTATATATCTTTTTATGATGTTTTTAAAATCAAAGTCAAGTTTAAAAACCAATAAGAGTAGTTTTTGTTTTTGGATTCTGGTTATGAATTCAAAACTTTCCTTACAAAAGATGAAAACTATTCCTTACACTTGTTTTTAAAAAAACAAAATCTAAAAACAAAATGGTTATCAACCGGGGCTTTAATAAATTGGATATTAGTATACTCTGAGCTATTGTGTTGGATAACCATGATTATTTCATCTTCAAATATATGTAAAATCATGATTCTGTATCTGAAATGGATTCATTTGATGATTTTCTCAGGTGAAGTCATTTCAGAAGAGTACTCTTTAGAGTATGGAACCGATAAAATGGAGATGCATGTAGGAGCTGTTGAAGCTGGAGAACGTGCTCTTGTGATAGATGATCTCATTGCAACTGGGGGAACCTTGCGTGCAGCAATAAGGCTACTTGGTAGGGTATTCTTAAAGCCAATGTTTTGTGTTTCAAGTTGATATATTACTTATTAGTTGAACATGCACTGGCCAGCTAAATAAAACAATGAAGTGTCTTGTTTTCACTCGGTTTTTTGCACCAAGACACTGCCTATCTTGGCCGTGATGATTCTTTGAATCTGGTTAATTGTTATTATGAGTGCTGTGATAGACCCGGGATTACAAAAGTATATATCCGTCGAAATAGGAAAGAGAAAGGGAGTGAGCAAAATGATGTAATGAGTAAGGAATAAAAGTTGTTATGTGGGTGCGAGTGTTTTTTAGAGTTTTGCTGACTGTGTGGGGTCTTGATGATTCTGTTAGTTAGGGAACAATCCTTCCATAGGGTATAGTTTTTCATCTTTTGTCATAGGGGAGATCTGGAACTCCCTTGGCTTTTGCCAAAATAGTGAATATAATTTTGGGAACTATCATGCTGCAGTTTCTGAACGTAATTTGCTCAGTTTCATAACTTCAGTTACTAAAAATCTGCTAAGAAATGATAATTCTTTGTTGACTCAACCCTTTGTGGCTGCTCTGTAGACGGGATCCTTCTCTTTTTAACTTTTCTTAATGAGCATTATCTTTTCATATTCTCGTGTTTGTTTATATTCATCGGTTGTGAACTGCATATGGCAGAGCGAGTTGGCGTTGAGGTGGTCGAGTGTGCATGTGTGATCGAGCTGGATGGACTAAAGGTATGCATTTGCAAAAATCTGAGAACAAATCAAAACCTTGTACTAGACTACTAGTTACAGATCTTCCCATGACTTTTGTCTAGTTTTATGTCTTATTATGTGATTATGATTCTCATTTCTGTAGTCTTGGAAACTTGAAATGAACTTCTGCCATTTTTCCTTTGGCATTTTATCAGGGCCGTGAACGATTGGGAGACAGACCTCTATTCGTTCTAGTTAATGCAGCAGGATGATTGTAGAGCCTTCATATGCAATATGCTATGTTTGGAAATGGTGGTACTAAGATTGTATCGCTGCTAGAAGTTGAAGTTTCAAAGTAATGCATAGTTTTGAAGCGGAGAGTCTGGCTAGAAATAAAAGGGTTGGTATTAATTTGAGAGTTGAAGAGATTAAAGAAAAGAAGAAAAAAGGTCTGTAGAGACTGTATAAGCTTTTGATTATTCTGGTGTAATGTATTTGTTCTTTGTTAATTGTTTTGCTGTCTCTTTTCTGCCTGGCTGTTGAAGATGGGGAGGAGAAAGAGAAGTGGTTGGTGTTAATTTTGAATATCTGCATAAACTTCTTTATTTTGCAGTTAATTAGTTTTTATCAAATAAAAATGCCTACTACCCCCTTCCCAATAAAATATTAGTTTTTGTATGCCTTTTCTGAAAGTGCCTTATTTTAGTTGTGTTATATATATATATATATATATTCTTTG CGTGGTTTACACTCGAATGACCCCCAAATTCATCGAACCAAATTGCCCTCCGGAATTCATTAATAATTATTAATTTTTTTTTCTCCTTATTGCGTTTTGGGCTAATTCAGATCAGAGCCGGCGATGAAATCAGTCTCCAATCTCACTTCCTCACTTCCTCTTTCGCCGTCACCGTCACCGTCGCACTGCAGGACCACCGCGGTCTTCACTCCTCGTCGACGGATCGGTTCTTCGTCAACAGCCGTCGGCGGCGCTTTCTCGTCGTGTCGTAAACATTTGACTCGCTTTCCACAGCATCGATCTTCGTTTTGGCCTCTGCGATGCAATGTGAGGGAGACGGTGCCGGATCAAGAAATGGCGTCCACCAATGAACAAGACCCACGCATAGCCAAAATCTCCAAGGCCATTCGAGTTATCCCAGATTTTCCTAAACCAGGGATTTTGTTTCAGGATATTACAACTTTGCTTCTTGATACAAAGGCCTTCAAGGATACTATCGATTTGTTCGTGGAGAGGTACAGAGAGAAGGATATCTCTGTCGTCGCTGGAATTGAGGCGAGAGGGTTCATTTTTGGCCCTCCGATAGCTCTGGCTATTGGTGCAAAATTTGTTCCCATGAGAAAACCGAAGAAGTTGCCTGGTGAAGTCATTTCAGAAGAGTACTCTTTAGAGTATGGAACCGATAAAATGGAGATGCATGTAGGAGCTGTTGAAGCTGGAGAACGTGCTCTTGTGATAGATGATCTCATTGCAACTGGGGGAACCTTGCGTGCAGCAATAAGGCTACTTGGTAGGCGAGTTGGCGTTGAGGTGGTCGAGTGTGCATGTGTGATCGAGCTGGATGGACTAAAGGGCCGTGAACGATTGGGAGACAGACCTCTATTCGTTCTAGTTAATGCAGCAGGATGATTGTAGAGCCTTCATATGCAATATGCTATGTTTGGAAATGGTGGTACTAAGATTGTATCGCTGCTAGAAGTTGAAGTTTCAAAGTAATGCATAGTTTTGAAGCGGAGAGTCTGGCTAGAAATAAAAGGGTTGGTATTAATTTGAGAGTTGAAGAGATTAAAGAAAAGAAGAAAAAAGGTCTGTAGAGACTGTATAAGCTTTTGATTATTCTGGTGTAATGTATTTGTTCTTTGTTAATTGTTTTGCTGTCTCTTTTCTGCCTGGCTGTTGAAGATGGGGAGGAGAAAGAGAAGTGGTTGGTGTTAATTTTGAATATCTGCATAAACTTCTTTATTTTGCAGTTAATTAGTTTTTATCAAATAAAAATGCCTACTACCCCCTTCCCAATAAAATATTAGTTTTTGTATGCCTTTTCTGAAAGTGCCTTATTTTAGTTGTGTTATATATATATATATATATATTCTTTG ATGAAATCAGTCTCCAATCTCACTTCCTCACTTCCTCTTTCGCCGTCACCGTCACCGTCGCACTGCAGGACCACCGCGGTCTTCACTCCTCGTCGACGGATCGGTTCTTCGTCAACAGCCGTCGGCGGCGCTTTCTCGTCGTGTCGTAAACATTTGACTCGCTTTCCACAGCATCGATCTTCGTTTTGGCCTCTGCGATGCAATGTGAGGGAGACGGTGCCGGATCAAGAAATGGCGTCCACCAATGAACAAGACCCACGCATAGCCAAAATCTCCAAGGCCATTCGAGTTATCCCAGATTTTCCTAAACCAGGGATTTTGTTTCAGGATATTACAACTTTGCTTCTTGATACAAAGGCCTTCAAGGATACTATCGATTTGTTCGTGGAGAGGTACAGAGAGAAGGATATCTCTGTCGTCGCTGGAATTGAGGCGAGAGGGTTCATTTTTGGCCCTCCGATAGCTCTGGCTATTGGTGCAAAATTTGTTCCCATGAGAAAACCGAAGAAGTTGCCTGGTGAAGTCATTTCAGAAGAGTACTCTTTAGAGTATGGAACCGATAAAATGGAGATGCATGTAGGAGCTGTTGAAGCTGGAGAACGTGCTCTTGTGATAGATGATCTCATTGCAACTGGGGGAACCTTGCGTGCAGCAATAAGGCTACTTGGTAGGCGAGTTGGCGTTGAGGTGGTCGAGTGTGCATGTGTGATCGAGCTGGATGGACTAAAGGGCCGTGAACGATTGGGAGACAGACCTCTATTCGTTCTAGTTAATGCAGCAGGATGA MKSVSNLTSSLPLSPSPSPSHCRTTAVFTPRRRIGSSSTAVGGAFSSCRKHLTRFPQHRSSFWPLRCNVRETVPDQEMASTNEQDPRIAKISKAIRVIPDFPKPGILFQDITTLLLDTKAFKDTIDLFVERYREKDISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGTDKMEMHVGAVEAGERALVIDDLIATGGTLRAAIRLLGRRVGVEVVECACVIELDGLKGRERLGDRPLFVLVNAAG
BLAST of Lsi08G015210 vs. Swiss-Prot
Match: APT1_ARATH (Adenine phosphoribosyltransferase 1, chloroplastic OS=Arabidopsis thaliana GN=APT1 PE=1 SV=2) HSP 1 Score: 297.7 bits (761), Expect = 1.2e-79 Identity = 154/207 (74.40%), Postives = 176/207 (85.02%), Query Frame = 1
BLAST of Lsi08G015210 vs. Swiss-Prot
Match: APT3_ARATH (Adenine phosphoribosyltransferase 3 OS=Arabidopsis thaliana GN=APT3 PE=1 SV=1) HSP 1 Score: 272.7 bits (696), Expect = 4.2e-72 Identity = 138/175 (78.86%), Postives = 154/175 (88.00%), Query Frame = 1
BLAST of Lsi08G015210 vs. Swiss-Prot
Match: APT1_WHEAT (Adenine phosphoribosyltransferase 1 OS=Triticum aestivum GN=APT1 PE=2 SV=1) HSP 1 Score: 272.7 bits (696), Expect = 4.2e-72 Identity = 134/175 (76.57%), Postives = 157/175 (89.71%), Query Frame = 1
BLAST of Lsi08G015210 vs. Swiss-Prot
Match: APT4_ARATH (Adenine phosphoribosyltransferase 4 OS=Arabidopsis thaliana GN=APT4 PE=1 SV=1) HSP 1 Score: 267.7 bits (683), Expect = 1.3e-70 Identity = 135/180 (75.00%), Postives = 156/180 (86.67%), Query Frame = 1
BLAST of Lsi08G015210 vs. Swiss-Prot
Match: APT5_ARATH (Adenine phosphoribosyltransferase 5 OS=Arabidopsis thaliana GN=APT5 PE=1 SV=1) HSP 1 Score: 244.2 bits (622), Expect = 1.6e-63 Identity = 121/177 (68.36%), Postives = 147/177 (83.05%), Query Frame = 1
BLAST of Lsi08G015210 vs. TrEMBL
Match: A0A0A0LN96_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G354800 PE=3 SV=1) HSP 1 Score: 436.8 bits (1122), Expect = 1.9e-119 Identity = 231/262 (88.17%), Postives = 242/262 (92.37%), Query Frame = 1
BLAST of Lsi08G015210 vs. TrEMBL
Match: W9QXV7_9ROSA (Adenine phosphoribosyltransferase 1 OS=Morus notabilis GN=L484_005256 PE=3 SV=1) HSP 1 Score: 330.5 bits (846), Expect = 1.9e-87 Identity = 192/261 (73.56%), Postives = 206/261 (78.93%), Query Frame = 1
BLAST of Lsi08G015210 vs. TrEMBL
Match: B9IBS4_POPTR (Adenine phosphoribosyltransferase 1 family protein OS=Populus trichocarpa GN=POPTR_0014s01740g PE=3 SV=1) HSP 1 Score: 323.9 bits (829), Expect = 1.7e-85 Identity = 174/219 (79.45%), Postives = 191/219 (87.21%), Query Frame = 1
BLAST of Lsi08G015210 vs. TrEMBL
Match: M5XNX8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010396mg PE=3 SV=1) HSP 1 Score: 323.2 bits (827), Expect = 3.0e-85 Identity = 173/233 (74.25%), Postives = 194/233 (83.26%), Query Frame = 1
BLAST of Lsi08G015210 vs. TrEMBL
Match: A0A061FGD2_THECC (Adenine phosphoribosyl transferase 1 isoform 1 OS=Theobroma cacao GN=TCM_034718 PE=3 SV=1) HSP 1 Score: 317.8 bits (813), Expect = 1.3e-83 Identity = 165/208 (79.33%), Postives = 184/208 (88.46%), Query Frame = 1
BLAST of Lsi08G015210 vs. TAIR10
Match: AT1G27450.3 (AT1G27450.3 adenine phosphoribosyl transferase 1) HSP 1 Score: 283.5 bits (724), Expect = 1.3e-76 Identity = 150/211 (71.09%), Postives = 170/211 (80.57%), Query Frame = 1
BLAST of Lsi08G015210 vs. TAIR10
Match: AT4G22570.1 (AT4G22570.1 adenine phosphoribosyl transferase 3) HSP 1 Score: 272.7 bits (696), Expect = 2.3e-73 Identity = 138/175 (78.86%), Postives = 154/175 (88.00%), Query Frame = 1
BLAST of Lsi08G015210 vs. TAIR10
Match: AT4G12440.2 (AT4G12440.2 adenine phosphoribosyl transferase 4) HSP 1 Score: 267.7 bits (683), Expect = 7.5e-72 Identity = 135/180 (75.00%), Postives = 156/180 (86.67%), Query Frame = 1
BLAST of Lsi08G015210 vs. TAIR10
Match: AT5G11160.1 (AT5G11160.1 adenine phosphoribosyltransferase 5) HSP 1 Score: 244.2 bits (622), Expect = 8.9e-65 Identity = 121/177 (68.36%), Postives = 147/177 (83.05%), Query Frame = 1
BLAST of Lsi08G015210 vs. TAIR10
Match: AT1G80050.1 (AT1G80050.1 adenine phosphoribosyl transferase 2) HSP 1 Score: 235.3 bits (599), Expect = 4.1e-62 Identity = 120/173 (69.36%), Postives = 141/173 (81.50%), Query Frame = 1
BLAST of Lsi08G015210 vs. NCBI nr
Match: gi|449450275|ref|XP_004142889.1| (PREDICTED: adenine phosphoribosyltransferase 1 [Cucumis sativus]) HSP 1 Score: 436.8 bits (1122), Expect = 2.7e-119 Identity = 231/262 (88.17%), Postives = 242/262 (92.37%), Query Frame = 1
BLAST of Lsi08G015210 vs. NCBI nr
Match: gi|659087655|ref|XP_008444565.1| (PREDICTED: adenine phosphoribosyltransferase 1 isoform X1 [Cucumis melo]) HSP 1 Score: 432.6 bits (1111), Expect = 5.0e-118 Identity = 233/263 (88.59%), Postives = 242/263 (92.02%), Query Frame = 1
BLAST of Lsi08G015210 vs. NCBI nr
Match: gi|659087657|ref|XP_008444567.1| (PREDICTED: adenine phosphoribosyltransferase 1, chloroplastic isoform X2 [Cucumis melo]) HSP 1 Score: 334.7 bits (857), Expect = 1.4e-88 Identity = 174/184 (94.57%), Postives = 178/184 (96.74%), Query Frame = 1
BLAST of Lsi08G015210 vs. NCBI nr
Match: gi|703079745|ref|XP_010091232.1| (Adenine phosphoribosyltransferase 1 [Morus notabilis]) HSP 1 Score: 330.5 bits (846), Expect = 2.7e-87 Identity = 192/261 (73.56%), Postives = 206/261 (78.93%), Query Frame = 1
BLAST of Lsi08G015210 vs. NCBI nr
Match: gi|743911984|ref|XP_010999861.1| (PREDICTED: adenine phosphoribosyltransferase 1-like [Populus euphratica]) HSP 1 Score: 328.2 bits (840), Expect = 1.3e-86 Identity = 176/219 (80.37%), Postives = 193/219 (88.13%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |