CmoCh05G001470 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAATGAGAGAGAGAGAGAGAGGGGAGTGGGGGATTTTATAGAGAGAACAGCAAGGAAGGAAATTGCGCGAGGACTGAGGAGGTTTGGCCTTTGGGTTCAGGACATACAAAATTACCACATTCTTATACCAAACTACAACTACATTACGAAAACATTCGCTAAAAAGAATTAAAAGATTAAGTAACAAATCAAATTTACGTGGGTTTTCATCGGACCAAAGTACCCTCCAGAATTATTGATTAATTAATTAATTTAAACGACGCTACACGAATACGTCGGCTTCCACAACCGTATCTCAATTTTTCTTTTTCATCCTTTTTACGTTTCGATTTCTCAGATCACAACCGGCGATGAAAGCAGCCTCCAATCTCAGTTCCTCACTTCCTATTTCGCCGTCACACTATAGGACCACCGCGGTCTTCACTCCTCATCGGCTGATCGCTTCTCCGTCAACAGCCGTGGGCGATGCTTTCTCGTCGTGTCGTACACATTTGACTCGCTCTCCACATCATCGATATTCGCTCAAGCCTCTGCGATGCAATGGTAATTCGGGATCCCAATCTCTTGTGTTAATCAATATTCGATGACGCAGGTCAAAATTGAACTCCTCTGTGGGGAAAGTTTGGTAATAATGGGGTAAGAATTTTTTAACGGTGGGGCAATTTGGTCAAATGGATTCTCTGTCGTGAAACGCTCGTTCCCCAACTTTTTGTATAAATAAATAGTAAATTAAACCTATGTTTTCCGTATTGGCCGCTGCCCCTTTCTTTTGCTCTGATTTTACCTCCGTCAAATTGTGTTGATCGAGTGTCCGGCGGGTGTTTGGCAGTGAGCAAGGCGGTGCCGGATCAAGAAATGGCGTCCACCGATGAACAAGACCCACGCATAGCCAAAATCGCCAAGGCCATTCGAGTAATCCCAGATTTCCCTAAACCAGGTGCTAATCTCCTCTCATTTGAAAATCGAAATGGCCGTTTCTAGGCTGAGAGATCCATCTTTGCTCTCTTTGTGCTTATTTGGGCTTTGCATGTGATGGGTCTTGTTTGGTGCTAAGTTTTTAGCTGAAACGATGTTTTTGTTCTAATTTTTTTCCGTAAACAACACCCTCTTCCTCTTTTGGTAGGGATTTTGTTTCAGGATATCACAACGTTGCTTCTTGATATAAAGGCCTTTAGGGACACTATTGATTTGTTCGTGGAGAGGTACAGAGGGAAGGATATTTCTGTTGTTGCTGGTAAATTCTGGCTTCAAAAGGGTCATTTTTACGTCAGGAGGGGAAGTAACTTTATGATATGACTTGAACCAATTCATCTTTTTTGTTCTGCAGGAATTGAGGCGAGGGGCTTCATTTTTGGCCCTCCGATAGCTCTGGCTATCGGTGCAAAATTTGTTCCCATGAGAAAACCCAAGAAGTTGCCTGGTACAATTTTGTGCTTGACACACCTTTATTTGTACCCATCTGAATCTATTTATAGTTTTAGCTACAGATTCAAGCATAATGTTCCGCATCTGACAAAAACTCTCGTGCATATGCTATTACATTTGATGTTTGCTATCCATAACCCGATGGTTAAGAAGTGAGCAATCTGCATGTCTTCTATGGTTAATCTCGTTTTCGATGCCAGAAACTTCAAGCTTTAGTCAATGTTCTAAGGTTTTTTGCTATTTTGATAGCTTAGGTTATGTTTGATAACCATCTGTCTTTAGGTTTTTGGTTTCTGAAAATTAAGAATATAAACACTACTTCCACCCACCCATGAGTTCCTTTGTTTTGTTATTTTCTACCATGTATGTTTCTATAATCCAAGCCAAGGTTTGAAAACCAATAAGAATAGTTTTTGAAAACGTGTTTTTGGAACTTATCTATGAACTTAAATATTTCCTTAGGAAAGATGAACTATCGTAAAGAATTTGACTAGGAATTCAAATGTTTTCTTTGGAAAGATGAAAAACAAAATGGTCATCAAACGGATAAACTGGATATTAGTATACTCTGGGCTATTGTATTGGATTACCATGATTAGTTTATCCTCAAACGAAAGTAAAATCATGATTCTGTATCTGAAATGTATTCGTTCAATCATGATTTCACAGGTGAAGTCATTTCAGAAGAATACTCTTTAGAGTATGGAACAGATAAAATTGAGATGCACGTAGGAGCTGTTGAAGCTGGAGAACGTGCTCTTGTGATAGATGATCTCATTGCAACTGGGGGAACCTTGTGTGCAGCAATAAGGCTACTTGGTAGGCCATTTTTAAAGCCAACGTTTCGTCTTCCAAGTGATTCTATTACTTTTTAGTTGAACATGCACTGGCCACAGCTGGAAGTGTCTCGTTTTTACTCGGGTTTTTGCACAATGACACTATCTTGGCTGTGATTTCCAAATCTTGCTCAGTTCTAGGACTCAGATTATTCTTTGAATCTGGTTAATTGTCATAGAAATTTTGGTTCAGTTTCTGAACAAAATTTTCTGAGTAGTCACTGAGAAATGACAATTGTTTGTTGACTCAGCCCTGTATTGCTGCTCAGTAGATGAGATCCTTCTCTTATTAACTTTTCTTTACGAGTGTTGTATTTTCACAATCTTGTGTTGGTTATATTAATCGGTTGTTTACTCCTTATGGCAGAGCGAGTTGGCGTTGAGGTGGTCGAGTGTGCTTGTGTGATCGAGCTGCAGGGACTAAAGGTATGCATTTGCAAAATTATGAGAACAGATCAGAAACCTTGTACTAGACTACTAGTTCCAGATCTTCCCATGACTTTTGTCCAGTTTGATGTTTATGATGTGATTATGATTCTCATTTCTCTAGTCTTGAAAATTTGAAATGAACTTCTGCCATTTTTTCTTTTGCAATTTCTCAGGGACGAGAACGATTGGGAGGCAAACCTCTATTCGTTCTAGTTAACGCGATGGCATGATCGTAGAGCCTTCTTATGCAATACAACGCATTTGGTATTGGTCGTTACAAGATCTTACTGCTGCTAGAAGTTGAAGTTTCCAAGTACTGCATAATTTTGAAGTGGAGAGTATTGCTAGAAATAAAAGGGATGGTATTAATCTGAGAGTTGAAGAGATAAAACAAAAAGAAGAAAAAGAAAATATTAGCTTTTGATTATTCTGGTTGTTATGTATTTGTTGTTTGTTAATTGTCGTGCTGTCTCCTTTCTGCCTGCCTGTTGACGATGTTAATTTTGATTATCTGCACAAACTTCTTTATTTTGCAGTTAATTAGTTTTTATCAAATAAAAATGCCTCCTCATGCATCATTACTTTTTA AAATGAGAGAGAGAGAGAGAGGGGAGTGGGGGATTTTATAGAGAGAACAGCAAGGAAGGAAATTGCGCGAGGACTGAGGAGGTTTGGCCTTTGGGTTCAGGACATACAAAATTACCACATTCTTATACCAAACTACAACTACATTACGAAAACATTCGCTAAAAAGAATTAAAAGATTAAGTAACAAATCAAATTTACGTGGGTTTTCATCGGACCAAAGTACCCTCCAGAATTATTGATTAATTAATTAATTTAAACGACGCTACACGAATACGTCGGCTTCCACAACCGTATCTCAATTTTTCTTTTTCATCCTTTTTACGTTTCGATTTCTCAGATCACAACCGGCGATGAAAGCAGCCTCCAATCTCAGTTCCTCACTTCCTATTTCGCCGTCACACTATAGGACCACCGCGGTCTTCACTCCTCATCGGCTGATCGCTTCTCCGTCAACAGCCGTGGGCGATGCTTTCTCGTCGTGTCGTACACATTTGACTCGCTCTCCACATCATCGATATTCGCTCAAGCCTCTGCGATGCAATGTGAGCAAGGCGGTGCCGGATCAAGAAATGGCGTCCACCGATGAACAAGACCCACGCATAGCCAAAATCGCCAAGGCCATTCGAGTAATCCCAGATTTCCCTAAACCAGGTGCTAATCTCCTCTCATTTGAAAATCGAAATGGCCGGATTTTGTTTCAGGATATCACAACGTTGCTTCTTGATATAAAGGCCTTTAGGGACACTATTGATTTGTTCGTGGAGAGGTACAGAGGGAAGGATATTTCTGTTGTTGCTGGTAAATTCTGGCTTCAAAAGGGTCATTTTTACGTCAGGAGGGGAAGAATTGAGGCGAGGGGCTTCATTTTTGGCCCTCCGATAGCTCTGGCTATCGGTGCAAAATTTGTTCCCATGAGAAAACCCAAGAAGTTGCCTGGTGAAGTCATTTCAGAAGAATACTCTTTAGAGTATGGAACAGATAAAATTGAGATGCACGTAGGAGCTGTTGAAGCTGGAGAACGTGCTCTTGTGATAGATGATCTCATTGCAACTGGGGGAACCTTGTGTGCAGCAATAAGGCTACTTGGTAGGCCATTTTTAAAGCCAACGTTTCGTCTTCCAAAGCGAGTTGGCGTTGAGGTGGTCGAGTGTGCTTGTGTGATCGAGCTGCAGGGACTAAAGGTATGCATTTGCAAAATTATGAGAACAGATCAGAAACCTTGTACTAGACTACTAGTTCCAGATCTTCCCATGACTTTTGTCCAGTTTGATGTTTATGATGGACGAGAACGATTGGGAGGCAAACCTCTATTCGTTCTAGTTAACGCGATGGCATGATCGTAGAGCCTTCTTATGCAATACAACGCATTTGGTATTGGTCGTTACAAGATCTTACTGCTGCTAGAAGTTGAAGTTTCCAAGTACTGCATAATTTTGAAGTGGAGAGTATTGCTAGAAATAAAAGGGATGGTATTAATCTGAGAGTTGAAGAGATAAAACAAAAAGAAGAAAAAGAAAATATTAGCTTTTGATTATTCTGGTTGTTATGTATTTGTTGTTTGTTAATTGTCGTGCTGTCTCCTTTCTGCCTGCCTGTTGACGATGTTAATTTTGATTATCTGCACAAACTTCTTTATTTTGCAGTTAATTAGTTTTTATCAAATAAAAATGCCTCCTCATGCATCATTACTTTTTA ATGAAAGCAGCCTCCAATCTCAGTTCCTCACTTCCTATTTCGCCGTCACACTATAGGACCACCGCGGTCTTCACTCCTCATCGGCTGATCGCTTCTCCGTCAACAGCCGTGGGCGATGCTTTCTCGTCGTGTCGTACACATTTGACTCGCTCTCCACATCATCGATATTCGCTCAAGCCTCTGCGATGCAATGTGAGCAAGGCGGTGCCGGATCAAGAAATGGCGTCCACCGATGAACAAGACCCACGCATAGCCAAAATCGCCAAGGCCATTCGAGTAATCCCAGATTTCCCTAAACCAGGTGCTAATCTCCTCTCATTTGAAAATCGAAATGGCCGGATTTTGTTTCAGGATATCACAACGTTGCTTCTTGATATAAAGGCCTTTAGGGACACTATTGATTTGTTCGTGGAGAGGTACAGAGGGAAGGATATTTCTGTTGTTGCTGGTAAATTCTGGCTTCAAAAGGGTCATTTTTACGTCAGGAGGGGAAGAATTGAGGCGAGGGGCTTCATTTTTGGCCCTCCGATAGCTCTGGCTATCGGTGCAAAATTTGTTCCCATGAGAAAACCCAAGAAGTTGCCTGGTGAAGTCATTTCAGAAGAATACTCTTTAGAGTATGGAACAGATAAAATTGAGATGCACGTAGGAGCTGTTGAAGCTGGAGAACGTGCTCTTGTGATAGATGATCTCATTGCAACTGGGGGAACCTTGTGTGCAGCAATAAGGCTACTTGGTAGGCCATTTTTAAAGCCAACGTTTCGTCTTCCAAAGCGAGTTGGCGTTGAGGTGGTCGAGTGTGCTTGTGTGATCGAGCTGCAGGGACTAAAGGTATGCATTTGCAAAATTATGAGAACAGATCAGAAACCTTGTACTAGACTACTAGTTCCAGATCTTCCCATGACTTTTGTCCAGTTTGATGTTTATGATGGACGAGAACGATTGGGAGGCAAACCTCTATTCGTTCTAGTTAACGCGATGGCATGA
BLAST of CmoCh05G001470 vs. Swiss-Prot
Match: APT1_ARATH (Adenine phosphoribosyltransferase 1, chloroplastic OS=Arabidopsis thaliana GN=APT1 PE=1 SV=2) HSP 1 Score: 255.8 bits (652), Expect = 6.6e-67 Identity = 145/228 (63.60%), Postives = 163/228 (71.49%), Query Frame = 1
BLAST of CmoCh05G001470 vs. Swiss-Prot
Match: APT3_ARATH (Adenine phosphoribosyltransferase 3 OS=Arabidopsis thaliana GN=APT3 PE=1 SV=1) HSP 1 Score: 237.3 bits (604), Expect = 2.4e-61 Identity = 130/200 (65.00%), Postives = 145/200 (72.50%), Query Frame = 1
BLAST of CmoCh05G001470 vs. Swiss-Prot
Match: APT1_WHEAT (Adenine phosphoribosyltransferase 1 OS=Triticum aestivum GN=APT1 PE=2 SV=1) HSP 1 Score: 233.0 bits (593), Expect = 4.6e-60 Identity = 127/197 (64.47%), Postives = 144/197 (73.10%), Query Frame = 1
BLAST of CmoCh05G001470 vs. Swiss-Prot
Match: APT4_ARATH (Adenine phosphoribosyltransferase 4 OS=Arabidopsis thaliana GN=APT4 PE=1 SV=1) HSP 1 Score: 228.4 bits (581), Expect = 1.1e-58 Identity = 126/204 (61.76%), Postives = 145/204 (71.08%), Query Frame = 1
BLAST of CmoCh05G001470 vs. Swiss-Prot
Match: APT5_ARATH (Adenine phosphoribosyltransferase 5 OS=Arabidopsis thaliana GN=APT5 PE=1 SV=1) HSP 1 Score: 200.3 bits (508), Expect = 3.3e-50 Identity = 111/197 (56.35%), Postives = 133/197 (67.51%), Query Frame = 1
BLAST of CmoCh05G001470 vs. TrEMBL
Match: A0A0A0LN96_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G354800 PE=3 SV=1) HSP 1 Score: 373.6 bits (958), Expect = 2.4e-100 Identity = 211/281 (75.09%), Postives = 220/281 (78.29%), Query Frame = 1
BLAST of CmoCh05G001470 vs. TrEMBL
Match: A0A061FGD2_THECC (Adenine phosphoribosyl transferase 1 isoform 1 OS=Theobroma cacao GN=TCM_034718 PE=3 SV=1) HSP 1 Score: 275.4 bits (703), Expect = 9.0e-71 Identity = 155/229 (67.69%), Postives = 173/229 (75.55%), Query Frame = 1
BLAST of CmoCh05G001470 vs. TrEMBL
Match: B9IBS4_POPTR (Adenine phosphoribosyltransferase 1 family protein OS=Populus trichocarpa GN=POPTR_0014s01740g PE=3 SV=1) HSP 1 Score: 274.6 bits (701), Expect = 1.5e-70 Identity = 158/241 (65.56%), Postives = 177/241 (73.44%), Query Frame = 1
BLAST of CmoCh05G001470 vs. TrEMBL
Match: W9QXV7_9ROSA (Adenine phosphoribosyltransferase 1 OS=Morus notabilis GN=L484_005256 PE=3 SV=1) HSP 1 Score: 273.5 bits (698), Expect = 3.4e-70 Identity = 172/282 (60.99%), Postives = 189/282 (67.02%), Query Frame = 1
BLAST of CmoCh05G001470 vs. TrEMBL
Match: M5XNX8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010396mg PE=3 SV=1) HSP 1 Score: 267.3 bits (682), Expect = 2.4e-68 Identity = 154/238 (64.71%), Postives = 173/238 (72.69%), Query Frame = 1
BLAST of CmoCh05G001470 vs. TAIR10
Match: AT1G27450.3 (AT1G27450.3 adenine phosphoribosyl transferase 1) HSP 1 Score: 240.7 bits (613), Expect = 1.2e-63 Identity = 141/232 (60.78%), Postives = 155/232 (66.81%), Query Frame = 1
BLAST of CmoCh05G001470 vs. TAIR10
Match: AT4G22570.1 (AT4G22570.1 adenine phosphoribosyl transferase 3) HSP 1 Score: 237.3 bits (604), Expect = 1.4e-62 Identity = 130/200 (65.00%), Postives = 145/200 (72.50%), Query Frame = 1
BLAST of CmoCh05G001470 vs. TAIR10
Match: AT4G12440.2 (AT4G12440.2 adenine phosphoribosyl transferase 4) HSP 1 Score: 228.4 bits (581), Expect = 6.4e-60 Identity = 126/204 (61.76%), Postives = 145/204 (71.08%), Query Frame = 1
BLAST of CmoCh05G001470 vs. TAIR10
Match: AT5G11160.1 (AT5G11160.1 adenine phosphoribosyltransferase 5) HSP 1 Score: 200.3 bits (508), Expect = 1.9e-51 Identity = 111/197 (56.35%), Postives = 133/197 (67.51%), Query Frame = 1
BLAST of CmoCh05G001470 vs. TAIR10
Match: AT1G80050.1 (AT1G80050.1 adenine phosphoribosyl transferase 2) HSP 1 Score: 195.7 bits (496), Expect = 4.6e-50 Identity = 111/197 (56.35%), Postives = 131/197 (66.50%), Query Frame = 1
BLAST of CmoCh05G001470 vs. NCBI nr
Match: gi|449450275|ref|XP_004142889.1| (PREDICTED: adenine phosphoribosyltransferase 1 [Cucumis sativus]) HSP 1 Score: 373.6 bits (958), Expect = 3.5e-100 Identity = 211/281 (75.09%), Postives = 220/281 (78.29%), Query Frame = 1
BLAST of CmoCh05G001470 vs. NCBI nr
Match: gi|659087655|ref|XP_008444565.1| (PREDICTED: adenine phosphoribosyltransferase 1 isoform X1 [Cucumis melo]) HSP 1 Score: 371.7 bits (953), Expect = 1.3e-99 Identity = 211/282 (74.82%), Postives = 219/282 (77.66%), Query Frame = 1
BLAST of CmoCh05G001470 vs. NCBI nr
Match: gi|659087657|ref|XP_008444567.1| (PREDICTED: adenine phosphoribosyltransferase 1, chloroplastic isoform X2 [Cucumis melo]) HSP 1 Score: 282.0 bits (720), Expect = 1.4e-72 Identity = 157/204 (76.96%), Postives = 161/204 (78.92%), Query Frame = 1
BLAST of CmoCh05G001470 vs. NCBI nr
Match: gi|1009135608|ref|XP_015885077.1| (PREDICTED: adenine phosphoribosyltransferase 1-like [Ziziphus jujuba]) HSP 1 Score: 279.6 bits (714), Expect = 6.8e-72 Identity = 156/229 (68.12%), Postives = 172/229 (75.11%), Query Frame = 1
BLAST of CmoCh05G001470 vs. NCBI nr
Match: gi|743911984|ref|XP_010999861.1| (PREDICTED: adenine phosphoribosyltransferase 1-like [Populus euphratica]) HSP 1 Score: 278.9 bits (712), Expect = 1.2e-71 Identity = 160/241 (66.39%), Postives = 179/241 (74.27%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |