Carg11878 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTATAGGACCACCGCGGTCTTCACTCCTCATCGGCGGATCGCTTCTCCGTCAACAGCCGTGGGCGATGCTTTCTCGTCGTGTCGTACACATTTGACTCGCTCTCCACATCATCGATATTCGCTCAAGCCTCTGCGATGCAATGGTAATTCGGAATCCCAATCTCTTGTGTTAGTCAATATTCGATGACGCAGGTCAAAATTGAACTCCTCTGTGGGGAAAGTTTGGTAATAATGGGGTAAGAATTTTTTTAACGGTGGGGCAATTTGGTCATATGGATTCTCTGTCGTGAAACGCTCGTTCCCCAACTTTTTGTATAAATAAATAGTAAATTAAACCTATGTTTTCCGTATTGGCCGCTGCCCCTTTCTTTTGCTCTGATTTTACCTCCGTCAAATTGTGTTGATCGAGTGTCCGGCGGGTGTTTGGCAGTGAGCAAGGCGGTGCCGGATCAAGAAATGGCGTCCACCGATGAACAAGACCCACGCATAGCCAAAATCGCCAAGGCCATTCGAGTAATCCCAGATTTCCCTAAACCAGGTACTAATCTCCTCTCATTTGAAAATCGAAATGGCCGTTTCTCGGCTGAGAGATCCATCTTTGCTGTCTTTGTGCTTATTTGGGCTTTGCATGTGATGGGTCTTGTTTGGTGCTAAGTTTTTAGCTGAAACGATGTTTTTGTTCTAATTTTTTTCCGTAAACAACACCCTCTTCCTCTTTTGGTAGGGATTTTGTTTCAGGATATCACAACGTTGCTTCTTGATATAAAGGCCTTTAGGGACACTATTGATTTGTTCGTGGAGAGGTACAGAGGGAAGGATATTTCTGTTGTTGCTGGTAAATTCTGGCTTCAAAAGGGTATTTTTACATCAGGAGGGGAAGTAACTTTATGATATGACTTGAACCAATTCATCTTTTTTGTTCTGCAGGAATTGAGGCGAGGGGCTTCATTTTTGGCCCTCCGATAGCTCTGGCTATCGGTGCAAAATTTGTTCCCATGAGAAAACCCAAGAAGTTGCCTGGTACAATTTTGTGCTCGACACACCTTTATTTGTACCCATCTGAATCTATTTATAGTTTTAGCTACGGATTCAAGCATAATGTTCCGCATCTGACAAAAACTCTCGTGCATATGCTATTACATTTGATGTTTGCTATCCATAACCCGATGGTTAAGAAGTGAGCAATCTGCATGTCTTCGATGGTTAATCTCGTTTTCGATGCCAGAAACTTCAAGCTTTAGTCAATGTTCTAAGGTTTTTTGCTATTTTGATAGTTTAGGTTATGTTTGATAACCATCTGTCTTTAGGTTTTTGGTTTCTGAAAATTAAGAATATAAACACTACTTCCACCCACCCATGAGTTCCTTTGTTTTGTTATTTTCTACCATGTATGTTTCTATAATCCAAGCCAAGGTTTGAAAACCAATAAGAATAGTTTTTGAAAACGTGTTTTTGGAACTTAAATATTTCCTTAGGAAAGATGAACTATCGTAAAGAATTTGACTAGGAATTCAAATGTTTTCTTTGGAAAGATGAAAAACAAAATGGTCATCAAACGGATAAACTGGATATTAGTATACTCTGGGCTATTGTATTGGATTACCATGATTAGTTTATCTTCAAATGAAAGTAAAATCATGATTTTGTATCTGAAATGTATTCGTTCAATCTATGATTTCACAGGTGAAGTCATTTCAGAAGAATACTCTTTAGAGTATGGAACAGATAAAATTGAGATGCACGTAGGAGCTGTTGAAGCTGGAGAACGTGCTCTTGTGATAGATGATCTCATTGCAACTGGGGGAACCTTGTGTGCAGCAATAAGGCTACTTGGTAGACCATTTTTAAAGCCAACGTTTCGTCTTCCAAGTGATTATATTACTTTTTAGTTGAACGTGCACTGGCCACAGCTGGAAGTGTCTCATTTTTACTCGGGTTTTTGCACAATGACACTATCTTGGCTGTGATTTCCAAATCTTGCTCAGTTCTAGGACTCAGATTATTCTTTGAATCTGGTTAATTGTCATTGAAATTTTGGTTCAGTTTCTGAACAAAATTTTCTGAGTAGTCGCTGAGAAATGACAATTGTTTGTTGACTCAGCCCTGTATTGCTGCTCAGTAGATGAGATCCTTCTCTTATTAACTTTTCTTTACGAGTGTTGTATTTTCACAATCTTGTGTTGGTTATACTAATAGGTTGTTTACTCCTTATGGCAGAGCGAGTTGGCGTTGAGGTGGTCGAGTGTGCTTGTGTGATCGAGCTGCAGGGACTTAAGGTACGCATTTGCAAAATTATGAGAACAGATCAGAACCTTGTACTAGACTACTAGTTCCAGATCTTCCCATGACTTCTGTCCAGTTTGATGTTTATGATGTGATTATGATTCTCATTTCTATAGTCTTGAAAATTTGAAATGAACTTCTGCCATTTTTTCTTTTGCAATTTCTCAGGGACGAGAACGATTGGGAGGCAAACCTCTATTCGTTCTAGTTAACGCGATGGCATGATCGTAGAGCCTTCTTATGCAATACAGCGCATTTGGTATTGGTCGTTACAAGATCTTACTGCTGCTAGAAGTTGAAGTTTCCAAGTACTGCATAATTTTGAAGTGGAGAGTATTGCTAGAAATAAAAGGGATGGTATTAATCTGAGAGTTGAAGAGATAAAACAAAAAGAAGAAAAAGAAAATATTAGCTTTTGATTATTCTGGTTGTTATGTATTTGTTGTTTGTTAATTGTCGTGCTGTCTCCTTTCTGCCTGCCTGTTGACGATGTTAATTTTGATTATCTGCACAAACTTCTTTATTTTGCAGTTAATTAGTTTTTATCAAATAAAAATGCCTCCTCATGC CTATAGGACCACCGCGGTCTTCACTCCTCATCGGCGGATCGCTTCTCCGTCAACAGCCGTGGGCGATGCTTTCTCGTCGTGTCGTACACATTTGACTCGCTCTCCACATCATCGATATTCGCTCAAGCCTCTGCGATGCAATGGTAATTCGGAATCCCAATCTCTTGTGTTAGTCAATATTCGATGACGCAGGTCAAAATTGAACTCCTTGGGGTAAGAATTTTTTTAACGGTGGGGCAATTTGGTCATATGGATTCTCTGTCGTGAAACGCTCGTTCCCCAACTTTTTGTATAAATAAATAGTAAATTAAACCTATGTTTTCCGTATTGGCCGCTGCCCCTTTCTTTTGCTCTGATTTTACCTCCGTCAAATTGTGTTGATCGAGTGTCCGGCGGGTGTTTGGCAGTGAGCAAGGCGGTGCCGGATCAAGAAATGGCGTCCACCGATGAACAAGACCCACGCATAGCCAAAATCGCCAAGGCCATTCGAGTAATCCCAGATTTCCCTAAACCAGGGATTTTGTTTCAGGATATCACAACGTTGCTTCTTGATATAAAGGCCTTTAGGGACACTATTGATTTGTTCGTGGAGAGGTACAGAGGGAAGGATATTTCTGTTGTTGCTGGAATTGAGGCGAGGGGCTTCATTTTTGGCCCTCCGATAGCTCTGGCTATCGGTGCAAAATTTGTTCCCATGAGAAAACCCAAGAAGTTGCCTGGTGAAGTCATTTCAGAAGAATACTCTTTAGAGTATGGAACAGATAAAATTGAGATGCACGTAGGAGCTGTTGAAGCTGGAGAACGTGCTCTTGTGATAGATGATCTCATTGCAACTGGGGGAACCTTGTGTGCAGCAATAAGGCTACTTGAGCGAGTTGGCGTTGAGGTGGTCGAGTGTGCTTGTGTGATCGAGCTGCAGGGACTTAAGGGACGAGAACGATTGGGAGGCAAACCTCTATTCGTTCTAGTTAACGCGATGGCATGATCGTAGAGCCTTCTTATGCAATACAGCGCATTTGGTATTGGTCGTTACAAGATCTTACTGCTGCTAGAAGTTGAAGTTTCCAAGTACTGCATAATTTTGAAGTGGAGAGTATTGCTAGAAATAAAAGGGATGGTATTAATCTGAGAGTTGAAGAGATAAAACAAAAAGAAGAAAAAGAAAATATTAGCTTTTGATTATTCTGGTTGTTATGTATTTGTTGTTTGTTAATTGTCGTGCTGTCTCCTTTCTGCCTGCCTGTTGACGATGTTAATTTTGATTATCTGCACAAACTTCTTTATTTTGCAGTTAATTAGTTTTTATCAAATAAAAATGCCTCCTCATGC ATGGCGTCCACCGATGAACAAGACCCACGCATAGCCAAAATCGCCAAGGCCATTCGAGTAATCCCAGATTTCCCTAAACCAGGGATTTTGTTTCAGGATATCACAACGTTGCTTCTTGATATAAAGGCCTTTAGGGACACTATTGATTTGTTCGTGGAGAGGTACAGAGGGAAGGATATTTCTGTTGTTGCTGGAATTGAGGCGAGGGGCTTCATTTTTGGCCCTCCGATAGCTCTGGCTATCGGTGCAAAATTTGTTCCCATGAGAAAACCCAAGAAGTTGCCTGGTGAAGTCATTTCAGAAGAATACTCTTTAGAGTATGGAACAGATAAAATTGAGATGCACGTAGGAGCTGTTGAAGCTGGAGAACGTGCTCTTGTGATAGATGATCTCATTGCAACTGGGGGAACCTTGTGTGCAGCAATAAGGCTACTTGAGCGAGTTGGCGTTGAGGTGGTCGAGTGTGCTTGTGTGATCGAGCTGCAGGGACTTAAGGGACGAGAACGATTGGGAGGCAAACCTCTATTCGTTCTAGTTAACGCGATGGCATGA MASTDEQDPRIAKIAKAIRVIPDFPKPGILFQDITTLLLDIKAFRDTIDLFVERYRGKDISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGTDKIEMHVGAVEAGERALVIDDLIATGGTLCAAIRLLERVGVEVVECACVIELQGLKGRERLGGKPLFVLVNAMA
BLAST of Carg11878 vs. NCBI nr
Match: XP_022962333.1 (adenine phosphoribosyltransferase 1-like [Cucurbita moschata]) HSP 1 Score: 356.7 bits (914), Expect = 4.8e-95 Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0
BLAST of Carg11878 vs. NCBI nr
Match: XP_022996903.1 (adenine phosphoribosyltransferase 1 isoform X2 [Cucurbita maxima]) HSP 1 Score: 356.7 bits (914), Expect = 4.8e-95 Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0
BLAST of Carg11878 vs. NCBI nr
Match: XP_022996902.1 (adenine phosphoribosyltransferase 1, chloroplastic isoform X1 [Cucurbita maxima]) HSP 1 Score: 356.7 bits (914), Expect = 4.8e-95 Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0
BLAST of Carg11878 vs. NCBI nr
Match: XP_023546871.1 (adenine phosphoribosyltransferase 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 356.7 bits (914), Expect = 4.8e-95 Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0
BLAST of Carg11878 vs. NCBI nr
Match: XP_022132221.1 (adenine phosphoribosyltransferase 1-like [Momordica charantia]) HSP 1 Score: 347.4 bits (890), Expect = 2.9e-92 Identity = 178/183 (97.27%), Postives = 180/183 (98.36%), Query Frame = 0
BLAST of Carg11878 vs. TAIR10
Match: AT4G22570.1 (adenine phosphoribosyl transferase 3) HSP 1 Score: 283.9 bits (725), Expect = 7.1e-77 Identity = 141/175 (80.57%), Postives = 157/175 (89.71%), Query Frame = 0
BLAST of Carg11878 vs. TAIR10
Match: AT1G27450.3 (adenine phosphoribosyl transferase 1) HSP 1 Score: 282.7 bits (722), Expect = 1.6e-76 Identity = 150/208 (72.12%), Postives = 166/208 (79.81%), Query Frame = 0
BLAST of Carg11878 vs. TAIR10
Match: AT4G12440.2 (adenine phosphoribosyl transferase 4) HSP 1 Score: 276.2 bits (705), Expect = 1.5e-74 Identity = 137/179 (76.54%), Postives = 158/179 (88.27%), Query Frame = 0
BLAST of Carg11878 vs. TAIR10
Match: AT5G11160.1 (adenine phosphoribosyltransferase 5) HSP 1 Score: 246.5 bits (628), Expect = 1.3e-65 Identity = 121/172 (70.35%), Postives = 145/172 (84.30%), Query Frame = 0
BLAST of Carg11878 vs. TAIR10
Match: AT1G80050.1 (adenine phosphoribosyl transferase 2) HSP 1 Score: 240.4 bits (612), Expect = 9.0e-64 Identity = 121/172 (70.35%), Postives = 143/172 (83.14%), Query Frame = 0
BLAST of Carg11878 vs. Swiss-Prot
Match: sp|P31166|APT1_ARATH (Adenine phosphoribosyltransferase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=APT1 PE=1 SV=2) HSP 1 Score: 296.6 bits (758), Expect = 1.9e-79 Identity = 150/183 (81.97%), Postives = 166/183 (90.71%), Query Frame = 0
BLAST of Carg11878 vs. Swiss-Prot
Match: sp|Q9SUW2|APT3_ARATH (Adenine phosphoribosyltransferase 3 OS=Arabidopsis thaliana OX=3702 GN=APT3 PE=1 SV=1) HSP 1 Score: 283.9 bits (725), Expect = 1.3e-75 Identity = 141/175 (80.57%), Postives = 157/175 (89.71%), Query Frame = 0
BLAST of Carg11878 vs. Swiss-Prot
Match: sp|Q43199|APT1_WHEAT (Adenine phosphoribosyltransferase 1 OS=Triticum aestivum OX=4565 GN=APT1 PE=2 SV=1) HSP 1 Score: 281.2 bits (718), Expect = 8.3e-75 Identity = 138/174 (79.31%), Postives = 157/174 (90.23%), Query Frame = 0
BLAST of Carg11878 vs. Swiss-Prot
Match: sp|Q9SU38|APT4_ARATH (Adenine phosphoribosyltransferase 4 OS=Arabidopsis thaliana OX=3702 GN=APT4 PE=1 SV=1) HSP 1 Score: 276.2 bits (705), Expect = 2.7e-73 Identity = 137/179 (76.54%), Postives = 158/179 (88.27%), Query Frame = 0
BLAST of Carg11878 vs. Swiss-Prot
Match: sp|Q9LFP0|APT5_ARATH (Adenine phosphoribosyltransferase 5 OS=Arabidopsis thaliana OX=3702 GN=APT5 PE=1 SV=1) HSP 1 Score: 246.5 bits (628), Expect = 2.3e-64 Identity = 121/172 (70.35%), Postives = 145/172 (84.30%), Query Frame = 0
BLAST of Carg11878 vs. TrEMBL
Match: tr|A0A0A0LN96|A0A0A0LN96_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G354800 PE=3 SV=1) HSP 1 Score: 339.0 bits (868), Expect = 6.8e-90 Identity = 173/181 (95.58%), Postives = 176/181 (97.24%), Query Frame = 0
BLAST of Carg11878 vs. TrEMBL
Match: tr|A0A1S3BAN4|A0A1S3BAN4_CUCME (adenine phosphoribosyltransferase 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487844 PE=3 SV=1) HSP 1 Score: 338.6 bits (867), Expect = 8.9e-90 Identity = 173/181 (95.58%), Postives = 176/181 (97.24%), Query Frame = 0
BLAST of Carg11878 vs. TrEMBL
Match: tr|A0A1S3BBF7|A0A1S3BBF7_CUCME (adenine phosphoribosyltransferase 1, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487844 PE=3 SV=1) HSP 1 Score: 338.6 bits (867), Expect = 8.9e-90 Identity = 173/181 (95.58%), Postives = 176/181 (97.24%), Query Frame = 0
BLAST of Carg11878 vs. TrEMBL
Match: tr|A0A2P5EZY8|A0A2P5EZY8_9ROSA (Adenine phosphoribosyl transferase OS=Trema orientalis OX=63057 GN=TorAPT1 PE=3 SV=1) HSP 1 Score: 318.5 bits (815), Expect = 9.5e-84 Identity = 163/181 (90.06%), Postives = 171/181 (94.48%), Query Frame = 0
BLAST of Carg11878 vs. TrEMBL
Match: tr|A0A061FGD2|A0A061FGD2_THECC (Adenine phosphoribosyl transferase 1 isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_034718 PE=3 SV=1) HSP 1 Score: 318.2 bits (814), Expect = 1.2e-83 Identity = 161/181 (88.95%), Postives = 171/181 (94.48%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |